Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:39:43 (3017772): wrapper (7.7.26015): starting
22:39:43 (3017772): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 22:39:43] Arguments: --nthreads 4
[2026-03-14 22:39:43] Threads: 4
[2026-03-14 22:39:43] Checking for CVMFS
[2026-03-14 22:39:43] No cvmfs_config command found, will try listing directly
[2026-03-14 22:39:43] CVMFS is ok
[2026-03-14 22:39:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 22:39:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 22:39:43] Further information can be found at the LHC@home message board.
[2026-03-14 22:39:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 22:39:43] Checking for apptainer binary...
[2026-03-14 22:39:43] which: no apptainer in ((null))
[2026-03-14 22:39:43] apptainer is not installed, using version from CVMFS
[2026-03-14 22:39:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 22:39:43] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot212/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-14 22:39:43] apptainer works
[2026-03-14 22:39:43] Set ATHENA_PROC_NUMBER=4
[2026-03-14 22:39:43] Set ATHENA_CORE_NUMBER=4
[2026-03-14 22:39:43] Starting ATLAS job with PandaID=7043588085
[2026-03-14 22:39:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot212/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 23:56:33]  *** The last 200 lines of the pilot log: ***
[2026-03-14 23:56:34]  is_tar=False
[2026-03-14 23:56:34]  lfn=log.48955010._025711.job.log.tgz.1
[2026-03-14 23:56:34]  mtime=0
[2026-03-14 23:56:34]  protocol_id=None
[2026-03-14 23:56:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 23:56:34]  replicas=None
[2026-03-14 23:56:34]  scope=mc23_13p6TeV
[2026-03-14 23:56:34]  status=None
[2026-03-14 23:56:34]  status_code=0
[2026-03-14 23:56:34]  storage_token=
[2026-03-14 23:56:34]  surl=/var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043588085/log.48955010._025711.job.log.tgz.1
[2026-03-14 23:56:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/4c/log.48955010._025711.job.log.tgz.1
[2026-03-14 23:56:34]  workdir=None
[2026-03-14 23:56:34] ]
[2026-03-14 23:56:34] 2026-03-14 22:56:00,055 | INFO     | transferring file log.48955010._025711.job.log.tgz.1 from /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043588085/log.48955010._025711.job.log.tgz.1 to /var/lib/
[2026-03-14 23:56:34] 2026-03-14 22:56:00,055 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043588085/log.48955010._025711.job.log.tgz.1 /var/lib/boinc/var/slot212/slots/0/
[2026-03-14 23:56:34] 2026-03-14 22:56:00,075 | INFO     | adding to output.list: log.48955010._025711.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/4c/log.48955010._025711.job.log.tg
[2026-03-14 23:56:34] 2026-03-14 22:56:00,076 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 23:56:34] 2026-03-14 22:56:00,076 | INFO     | summary of transferred files:
[2026-03-14 23:56:34] 2026-03-14 22:56:00,076 | INFO     |  -- lfn=log.48955010._025711.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 23:56:34] 2026-03-14 22:56:00,076 | INFO     | stage-out finished correctly
[2026-03-14 23:56:34] 2026-03-14 22:56:00,133 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 23:56:34] 2026-03-14 22:56:00,770 | WARNING  | process 3028425 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 23:56:34] 2026-03-14 22:56:00,770 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043588085/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 23:56:34] 2026-03-14 22:56:00,892 | INFO     | job 7043588085 has state=finished
[2026-03-14 23:56:34] 2026-03-14 22:56:00,892 | INFO     | preparing for final server update for job 7043588085 in state='finished'
[2026-03-14 23:56:34] 2026-03-14 22:56:00,892 | INFO     | reading metadata from: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043588085/jobReport.json
[2026-03-14 23:56:34] 2026-03-14 22:56:00,894 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot212/slots/0/workernode_map.json
[2026-03-14 23:56:34] 2026-03-14 22:56:00,894 | INFO     | this job has now completed (state=finished)
[2026-03-14 23:56:34] 2026-03-14 22:56:00,894 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 23:56:34] 2026-03-14 22:56:00,894 | INFO     | log transfer has been attempted: DONE
[2026-03-14 23:56:34] 2026-03-14 22:56:00,894 | INFO     | job 7043588085 has finished - writing final server update
[2026-03-14 23:56:34] 2026-03-14 22:56:00,897 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2836163/.job.ad'
[2026-03-14 23:56:34] 2026-03-14 22:56:00,897 | INFO     | total number of processed events: 400 (read)
[2026-03-14 23:56:34] 2026-03-14 22:56:00,923 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7043588085/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 23:56:34] 2026-03-14 22:56:00,924 | INFO     | extracted standard info from prmon json
[2026-03-14 23:56:34] 2026-03-14 22:56:00,924 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 23:56:34] 2026-03-14 22:56:00,924 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 23:56:34] 2026-03-14 22:56:00,924 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 23:56:34] 2026-03-14 22:56:00,924 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 23:56:34] 2026-03-14 22:56:00,931 | INFO     | fitting pss+swap vs Time
[2026-03-14 23:56:34] 2026-03-14 22:56:00,931 | INFO     | sum of square deviations: 97479037.0
[2026-03-14 23:56:34] 2026-03-14 22:56:00,932 | INFO     | sum of deviations: 143682389.0
[2026-03-14 23:56:34] 2026-03-14 22:56:00,932 | INFO     | mean x: 1773526768.5
[2026-03-14 23:56:34] 2026-03-14 22:56:00,932 | INFO     | mean y: 2326413.970588235
[2026-03-14 23:56:34] 2026-03-14 22:56:00,932 | INFO     | intersect: -2611820903.195973
[2026-03-14 23:56:34] 2026-03-14 22:56:00,932 | INFO     | chi2: 0.0002487527779759389
[2026-03-14 23:56:34] 2026-03-14 22:56:00,932 | INFO     | current memory leak: 1.47 B/s (using 68 data points, chi2=0.00)
[2026-03-14 23:56:34] 2026-03-14 22:56:00,933 | INFO     | could have reported an average CPU frequency of 3589 MHz (6 samples)
[2026-03-14 23:56:34] 2026-03-14 22:56:00,933 | INFO     | ..............................
[2026-03-14 23:56:34] 2026-03-14 22:56:00,933 | INFO     | . Timing measurements:
[2026-03-14 23:56:34] 2026-03-14 22:56:00,933 | INFO     | . get job = 0 s
[2026-03-14 23:56:34] 2026-03-14 22:56:00,933 | INFO     | . initial setup = 5 s
[2026-03-14 23:56:34] 2026-03-14 22:56:00,933 | INFO     | . payload setup = 6 s
[2026-03-14 23:56:34] 2026-03-14 22:56:00,933 | INFO     | . stage-in = 0 s
[2026-03-14 23:56:34] 2026-03-14 22:56:00,933 | INFO     | . payload execution = 4544 s
[2026-03-14 23:56:34] 2026-03-14 22:56:00,933 | INFO     | . stage-out = 0 s
[2026-03-14 23:56:34] 2026-03-14 22:56:00,933 | INFO     | . log creation = 0 s
[2026-03-14 23:56:34] 2026-03-14 22:56:00,933 | INFO     | ..............................
[2026-03-14 23:56:34] 2026-03-14 22:56:00,992 | INFO     | 
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | job summary report
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | --------------------------------------------------
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | PanDA job id: 7043588085
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | task id: 48955010
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | errors: (none)
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | pilot state: finished 
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | transexitcode: 0
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | exeerrorcode: 0
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | exeerrordiag: 
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | exitcode: 0
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | exitmsg: OK
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | cpuconsumptiontime: 17356 s
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | nevents: 400
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | neventsw: 0
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | pid: 3028425
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | pgrp: 3028425
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | corecount: 4
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | event service: False
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | sizes: {0: 2279987, 1: 2280193, 11: 2280221, 4551: 2306424, 4552: 2315502, 4553: 2315640}
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | --------------------------------------------------
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | 
[2026-03-14 23:56:34] 2026-03-14 22:56:00,995 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot212/slots/0
[2026-03-14 23:56:34] 2026-03-14 22:56:01,013 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,014 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 23:56:34] 2026-03-14 22:56:01,015 | INFO     | job 7043588085 has completed (purged errors)
[2026-03-14 23:56:34] 2026-03-14 22:56:01,015 | INFO     | overall cleanup function is called
[2026-03-14 23:56:34] 2026-03-14 22:56:01,346 | INFO     | number of running child processes to parent process 3028425: 1
[2026-03-14 23:56:34] 2026-03-14 22:56:01,346 | INFO     | maximum number of monitored processes: 6
[2026-03-14 23:56:34] 2026-03-14 22:56:01,346 | INFO     | aborting job monitoring since job object (job id=7043588085) has expired
[2026-03-14 23:56:34] 2026-03-14 22:56:02,022 | INFO     | --- collectZombieJob: --- 10, [3028425]
[2026-03-14 23:56:34] 2026-03-14 22:56:02,023 | INFO     | zombie collector waiting for pid 3028425
[2026-03-14 23:56:34] 2026-03-14 22:56:02,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 23:56:34] 2026-03-14 22:56:02,023 | INFO     | collected zombie processes
[2026-03-14 23:56:34] 2026-03-14 22:56:02,023 | INFO     | will attempt to kill all subprocesses of pid=3028425
[2026-03-14 23:56:34] 2026-03-14 22:56:02,512 | INFO     | process IDs to be killed: [3028425] (in reverse order)
[2026-03-14 23:56:34] 2026-03-14 22:56:02,755 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 23:56:34] 2026-03-14 22:56:02,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 23:56:34] 2026-03-14 22:56:02,788 | INFO     | did not find any defunct processes belonging to 3028425
[2026-03-14 23:56:34] 2026-03-14 22:56:02,819 | INFO     | did not find any defunct processes belonging to 3028425
[2026-03-14 23:56:34] 2026-03-14 22:56:02,819 | INFO     | ready for new job
[2026-03-14 23:56:34] 2026-03-14 22:56:02,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 23:56:34] 2026-03-14 22:56:02,820 | INFO     | **************************************
[2026-03-14 23:56:34] 2026-03-14 22:56:02,820 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 23:56:34] 2026-03-14 22:56:02,821 | INFO     | **************************************
[2026-03-14 23:56:34] 2026-03-14 22:56:02,821 | INFO     | 
[2026-03-14 23:56:34] 2026-03-14 22:56:02,827 | INFO     | architecture information:
[2026-03-14 23:56:34] 2026-03-14 22:56:02,827 | INFO     | executing command: cat /etc/os-release
[2026-03-14 23:56:34] 2026-03-14 22:56:02,843 | INFO     | cat /etc/os-release:
[2026-03-14 23:56:34] NAME="CentOS Linux"
[2026-03-14 23:56:34] VERSION="7 (Core)"
[2026-03-14 23:56:34] ID="centos"
[2026-03-14 23:56:34] ID_LIKE="rhel fedora"
[2026-03-14 23:56:34] VERSION_ID="7"
[2026-03-14 23:56:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 23:56:34] ANSI_COLOR="0;31"
[2026-03-14 23:56:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 23:56:34] HOME_URL="https://www.centos.org/"
[2026-03-14 23:56:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 23:56:34] 
[2026-03-14 23:56:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 23:56:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 23:56:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 23:56:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 23:56:34] 
[2026-03-14 23:56:34] 2026-03-14 22:56:02,843 | INFO     | **************************************
[2026-03-14 23:56:34] 2026-03-14 22:56:03,347 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-14 23:56:34] 2026-03-14 22:56:03,365 | INFO     | sufficient remaining disk space (19331547136 B)
[2026-03-14 23:56:34] 2026-03-14 22:56:03,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 23:56:34] 2026-03-14 22:56:03,365 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 23:56:34] 2026-03-14 22:56:03,365 | INFO     | update_server=False
[2026-03-14 23:56:34] 2026-03-14 22:56:03,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 23:56:34] 2026-03-14 22:56:03,367 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 23:56:34] 2026-03-14 22:56:03,547 | INFO     | all payload control threads have been joined
[2026-03-14 23:56:34] 2026-03-14 22:56:03,549 | INFO     | all job control threads have been joined
[2026-03-14 23:56:34] 2026-03-14 22:56:03,854 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 23:56:34] 2026-03-14 22:56:03,855 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 23:56:34] 2026-03-14 22:56:03,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 23:56:34] 2026-03-14 22:56:03,855 | INFO     | will abort loop
[2026-03-14 23:56:34] 2026-03-14 22:56:04,295 | INFO     | all data control threads have been joined
[2026-03-14 23:56:34] 2026-03-14 22:56:04,320 | INFO     | [monitor] cgroup control has ended
[2026-03-14 23:56:34] 2026-03-14 22:56:04,371 | INFO     | [job] retrieve thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:04,553 | INFO     | [payload] control thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:04,554 | INFO     | [job] control thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:04,860 | INFO     | [job] job monitor thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:04,930 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:04,947 | INFO     | [payload] failed_post thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:05,166 | INFO     | [job] validate thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:05,240 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:05,279 | INFO     | [data] copytool_in thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:05,301 | INFO     | [data] control thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:05,364 | INFO     | [payload] validate_post thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:05,365 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:05,372 | INFO     | [data] copytool_out thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:06,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 23:56:34] 2026-03-14 22:56:06,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 23:56:34] 2026-03-14 22:56:07,006 | INFO     | [job] queue monitor thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:07,361 | INFO     | job.realtimelogging is not enabled
[2026-03-14 23:56:34] 2026-03-14 22:56:08,366 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:10,195 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 23:56:34] 2026-03-14 22:56:11,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22474911991616)>', '<ExcThread(monitor, started 22474667591424)>']
[2026-03-14 23:56:34] 2026-03-14 22:56:16,678 | INFO     | all workflow threads have been joined
[2026-03-14 23:56:34] 2026-03-14 22:56:16,679 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 23:56:34] 2026-03-14 22:56:16,679 | INFO     | traces error code: 0
[2026-03-14 23:56:34] 2026-03-14 22:56:16,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 23:56:34] 2026-03-14 22:56:33,587 | INFO     | PID=3022316 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 23:56:34] 2026-03-14 22:56:33,589 | INFO     | .. there are 49 such processes running
[2026-03-14 23:56:34] 2026-03-14 22:56:33,590 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 23:56:34] 2026-03-14 22:56:33,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 23:56:34] 2026-03-14 22:56:33,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 23:56:34] 2026-03-14 22:56:33,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 23:56:34] 2026-03-14 22:56:33,590 | INFO     | [monitor] control thread has ended
[2026-03-14 23:56:34] 2026-03-14 22:56:33,757 [wrapper] ==== pilot stdout END ====
[2026-03-14 23:56:34] 2026-03-14 22:56:33,759 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 23:56:34] 2026-03-14 22:56:33,762 [wrapper] pilotpid: 3022316
[2026-03-14 23:56:34] 2026-03-14 22:56:33,764 [wrapper] Pilot exit status: 0
[2026-03-14 23:56:34] 2026-03-14 22:56:33,777 [wrapper] pandaids: 7043588085
[2026-03-14 23:56:34] 2026-03-14 22:56:33,909 [wrapper] cleanup supervisor_pilot 3757423 3022317
[2026-03-14 23:56:34] 2026-03-14 22:56:33,912 [wrapper] Test setup, not cleaning
[2026-03-14 23:56:34] 2026-03-14 22:56:33,915 [wrapper] apfmon messages muted
[2026-03-14 23:56:34] 2026-03-14 22:56:33,919 [wrapper] ==== wrapper stdout END ====
[2026-03-14 23:56:34] 2026-03-14 22:56:33,921 [wrapper] ==== wrapper stderr END ====
[2026-03-14 23:56:34]  *** Error codes and diagnostics ***
[2026-03-14 23:56:34]     "exeErrorCode": 0,
[2026-03-14 23:56:34]     "exeErrorDiag": "",
[2026-03-14 23:56:34]     "pilotErrorCode": 0,
[2026-03-14 23:56:34]     "pilotErrorDiag": "",
[2026-03-14 23:56:34]  *** Listing of results directory ***
[2026-03-14 23:56:34] total 614160
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc    585013 Mar 12 23:18 pilot3.tar.gz
[2026-03-14 23:56:34] -rwx------. 1 boinc boinc     36322 Mar 12 23:21 runpilot2-wrapper.sh
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc      5111 Mar 12 23:24 queuedata.json
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc       100 Mar 14 22:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 23:56:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 22:39 run_atlas
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc       105 Mar 14 22:39 job.xml
[2026-03-14 23:56:34] -rw-r--r--. 2 boinc boinc 441753184 Mar 14 22:39 EVNT.46701403._001508.pool.root.1
[2026-03-14 23:56:34] -rw-r--r--. 2 boinc boinc     15845 Mar 14 22:39 start_atlas.sh
[2026-03-14 23:56:34] drwxrwx--x. 2 boinc boinc      4096 Mar 14 22:39 shared
[2026-03-14 23:56:34] -rw-r--r--. 2 boinc boinc    597534 Mar 14 22:39 input.tar.gz
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc      6709 Mar 14 22:39 init_data.xml
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc         0 Mar 14 22:39 boinc_lockfile
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc      2564 Mar 14 22:39 pandaJob.out
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc   1006481 Mar 14 22:39 agis_schedconf.cvmfs.json
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc   1511579 Mar 14 22:39 agis_ddmendpoints.agis.ALL.json
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc       444 Mar 14 22:39 workernode_map.json
[2026-03-14 23:56:34] drwx------. 5 boinc boinc      4096 Mar 14 22:39 pilot3
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc 181299016 Mar 14 23:55 HITS.48955010._025711.pool.root.1
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc       530 Mar 14 23:55 boinc_task_state.xml
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc      1028 Mar 14 23:55 memory_monitor_summary.json
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc    287768 Mar 14 23:55 log.48955010._025711.job.log.tgz.1
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc      6369 Mar 14 23:56 heartbeat.json
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc      8192 Mar 14 23:56 boinc_mmap_file
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc        27 Mar 14 23:56 wrapper_checkpoint.txt
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc       823 Mar 14 23:56 pilotlog.txt
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc        95 Mar 14 23:56 pilot_heartbeat.json
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc    670965 Mar 14 23:56 log.48955010._025711.job.log.1
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc       357 Mar 14 23:56 output.list
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc       620 Mar 14 23:56 runtime_log
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc    972800 Mar 14 23:56 result.tar.gz
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc      9221 Mar 14 23:56 runtime_log.err
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc       663 Mar 14 23:56 C6MODmna3K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDms0nLDmqFDt1n.diag
[2026-03-14 23:56:34] -rw-r--r--. 1 boinc boinc     21443 Mar 14 23:56 stderr.txt
[2026-03-14 23:56:34] HITS file was successfully produced:
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc 181299016 Mar 14 23:55 shared/HITS.pool.root.1
[2026-03-14 23:56:34]  *** Contents of shared directory: ***
[2026-03-14 23:56:34] total 610012
[2026-03-14 23:56:34] -rw-r--r--. 2 boinc boinc 441753184 Mar 14 22:39 ATLAS.root_0
[2026-03-14 23:56:34] -rw-r--r--. 2 boinc boinc     15845 Mar 14 22:39 start_atlas.sh
[2026-03-14 23:56:34] -rw-r--r--. 2 boinc boinc    597534 Mar 14 22:39 input.tar.gz
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc 181299016 Mar 14 23:55 HITS.pool.root.1
[2026-03-14 23:56:34] -rw-------. 1 boinc boinc    972800 Mar 14 23:56 result.tar.gz
23:56:35 (3017772): run_atlas exited; CPU time 17564.308401
23:56:35 (3017772): called boinc_finish(0)

</stderr_txt>
]]>

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