Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:55:47 (21199): wrapper (7.7.26015): starting
13:55:47 (21199): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 13:55:47] Arguments: --nthreads 8
[2026-03-13 13:55:47] Threads: 8
[2026-03-13 13:55:47] Checking for CVMFS
[2026-03-13 13:55:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 13:55:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 13:55:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 13:55:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 13:55:52] 2.11.2.0 12460 126162 107768 157240 1 54 19493774 25165824 4784 130560 154 40194294 99.814 26957876 928 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 13:55:52] CVMFS is ok
[2026-03-13 13:55:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 13:55:52] Checking for apptainer binary...
[2026-03-13 13:55:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 13:55:52] Running /usr/bin/apptainer --version
[2026-03-13 13:55:52] apptainer version 1.3.2-1.el7
[2026-03-13 13:55:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 13:56:04] cg-vwn485.simple-grid.lan
[2026-03-13 13:56:04] apptainer works
[2026-03-13 13:56:04] Set ATHENA_PROC_NUMBER=8
[2026-03-13 13:56:04] Set ATHENA_CORE_NUMBER=8
[2026-03-13 13:56:04] Starting ATLAS job with PandaID=7043636109
[2026-03-13 13:56:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 17:38:41]  *** The last 200 lines of the pilot log: ***
[2026-03-13 17:38:41] 2026-03-13 16:37:50,857 | INFO     | job 7043636109 has finished - writing final server update
[2026-03-13 17:38:41] 2026-03-13 16:37:50,857 | INFO     | total number of processed events: 400 (read)
[2026-03-13 17:38:41] 2026-03-13 16:37:50,859 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7043636109/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 17:38:41] 2026-03-13 16:37:50,860 | INFO     | extracted standard info from prmon json
[2026-03-13 17:38:41] 2026-03-13 16:37:50,860 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 17:38:41] 2026-03-13 16:37:50,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 17:38:41] 2026-03-13 16:37:50,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 17:38:41] 2026-03-13 16:37:50,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 17:38:41] 2026-03-13 16:37:50,865 | INFO     | fitting pss+swap vs Time
[2026-03-13 17:38:41] 2026-03-13 16:37:50,865 | INFO     | sum of square deviations: 2830787960.0
[2026-03-13 17:38:41] 2026-03-13 16:37:50,867 | INFO     | sum of deviations: 85709603243.0
[2026-03-13 17:38:41] 2026-03-13 16:37:50,867 | INFO     | mean x: 1773413468.0
[2026-03-13 17:38:41] 2026-03-13 16:37:50,867 | INFO     | mean y: 2409596.4401913877
[2026-03-13 17:38:41] 2026-03-13 16:37:50,867 | INFO     | intersect: -53692380290.99195
[2026-03-13 17:38:41] 2026-03-13 16:37:50,868 | INFO     | chi2: 5.9190211082217425
[2026-03-13 17:38:41] 2026-03-13 16:37:50,868 | INFO     | sum of square deviations: 2632440055.0
[2026-03-13 17:38:41] 2026-03-13 16:37:50,870 | INFO     | sum of deviations: 97022863505.99998
[2026-03-13 17:38:41] 2026-03-13 16:37:50,870 | INFO     | mean x: 1773413315.5
[2026-03-13 17:38:41] 2026-03-13 16:37:50,870 | INFO     | mean y: 2418088.617647059
[2026-03-13 17:38:41] 2026-03-13 16:37:50,870 | INFO     | intersect: -65359616546.38542
[2026-03-13 17:38:41] 2026-03-13 16:37:50,871 | INFO     | chi2: 5.192657596009713
[2026-03-13 17:38:41] 2026-03-13 16:37:50,871 | INFO     | current chi2=5.192657596009713 (change=12.27168308629755 %)
[2026-03-13 17:38:41] 2026-03-13 16:37:50,871 | INFO     | right removable region: 203
[2026-03-13 17:38:41] 2026-03-13 16:37:50,871 | INFO     | sum of square deviations: 2632440055.0
[2026-03-13 17:38:41] 2026-03-13 16:37:50,873 | INFO     | sum of deviations: 16733629190.000002
[2026-03-13 17:38:41] 2026-03-13 16:37:50,873 | INFO     | mean x: 1773413620.5
[2026-03-13 17:38:41] 2026-03-13 16:37:50,873 | INFO     | mean y: 2462572.0098039214
[2026-03-13 17:38:41] 2026-03-13 16:37:50,873 | INFO     | intersect: -11270594100.098305
[2026-03-13 17:38:41] 2026-03-13 16:37:50,874 | INFO     | chi2: 1.521630782575974
[2026-03-13 17:38:41] 2026-03-13 16:37:50,874 | INFO     | current chi2=1.521630782575974 (change=74.29252650472269 %)
[2026-03-13 17:38:41] 2026-03-13 16:37:50,874 | INFO     | sum of square deviations: 2443580700.0
[2026-03-13 17:38:41] 2026-03-13 16:37:50,876 | INFO     | sum of deviations: -6289087556.000002
[2026-03-13 17:38:41] 2026-03-13 16:37:50,876 | INFO     | mean x: 1773413773.0
[2026-03-13 17:38:41] 2026-03-13 16:37:50,876 | INFO     | mean y: 2480969.5427135676
[2026-03-13 17:38:41] 2026-03-13 16:37:50,876 | INFO     | intersect: 4566747863.373276
[2026-03-13 17:38:41] 2026-03-13 16:37:50,877 | INFO     | chi2: 0.8047629182340749
[2026-03-13 17:38:41] 2026-03-13 16:37:50,877 | INFO     | current chi2=0.8047629182340749 (change=47.111814018924555 %)
[2026-03-13 17:38:41] 2026-03-13 16:37:50,877 | INFO     | sum of square deviations: 2263977332.5
[2026-03-13 17:38:41] 2026-03-13 16:37:50,879 | INFO     | sum of deviations: -6757812989.5
[2026-03-13 17:38:41] 2026-03-13 16:37:50,879 | INFO     | mean x: 1773413925.5
[2026-03-13 17:38:41] 2026-03-13 16:37:50,879 | INFO     | mean y: 2481381.5
[2026-03-13 17:38:41] 2026-03-13 16:37:50,879 | INFO     | intersect: 5295997128.970093
[2026-03-13 17:38:41] 2026-03-13 16:37:50,880 | INFO     | chi2: 0.7951012168164914
[2026-03-13 17:38:41] 2026-03-13 16:37:50,880 | INFO     | current chi2=0.7951012168164914 (change=1.2005649364143876 %)
[2026-03-13 17:38:41] 2026-03-13 16:37:50,880 | INFO     | left removable region: 30
[2026-03-13 17:38:41] 2026-03-13 16:37:50,880 | INFO     | sum of square deviations: 1605470102.0
[2026-03-13 17:38:41] 2026-03-13 16:37:50,881 | INFO     | sum of deviations: 2887753786.0
[2026-03-13 17:38:41] 2026-03-13 16:37:50,881 | INFO     | mean x: 1773414200.0
[2026-03-13 17:38:41] 2026-03-13 16:37:50,882 | INFO     | mean y: 2495269.3063583816
[2026-03-13 17:38:41] 2026-03-13 16:37:50,882 | INFO     | intersect: -3187339012.762484
[2026-03-13 17:38:41] 2026-03-13 16:37:50,882 | INFO     | chi2: 0.0006484547112283645
[2026-03-13 17:38:41] 2026-03-13 16:37:50,882 | INFO     | current memory leak: 1.80 B/s (using 173 data points, chi2=0.00)
[2026-03-13 17:38:41] 2026-03-13 16:37:50,883 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-03-13 17:38:41] 2026-03-13 16:37:50,883 | INFO     | ..............................
[2026-03-13 17:38:41] 2026-03-13 16:37:50,883 | INFO     | . Timing measurements:
[2026-03-13 17:38:41] 2026-03-13 16:37:50,883 | INFO     | . get job = 0 s
[2026-03-13 17:38:41] 2026-03-13 16:37:50,883 | INFO     | . initial setup = 105 s
[2026-03-13 17:38:41] 2026-03-13 16:37:50,883 | INFO     | . payload setup = 128 s
[2026-03-13 17:38:41] 2026-03-13 16:37:50,883 | INFO     | . stage-in = 0 s
[2026-03-13 17:38:41] 2026-03-13 16:37:50,884 | INFO     | . payload execution = 12844 s
[2026-03-13 17:38:41] 2026-03-13 16:37:50,884 | INFO     | . stage-out = 4 s
[2026-03-13 17:38:41] 2026-03-13 16:37:50,884 | INFO     | . log creation = 1 s
[2026-03-13 17:38:41] 2026-03-13 16:37:50,884 | INFO     | ..............................
[2026-03-13 17:38:41] 2026-03-13 16:37:51,015 | INFO     | 
[2026-03-13 17:38:41] 2026-03-13 16:37:51,016 | INFO     | job summary report
[2026-03-13 17:38:41] 2026-03-13 16:37:51,016 | INFO     | --------------------------------------------------
[2026-03-13 17:38:41] 2026-03-13 16:37:51,016 | INFO     | PanDA job id: 7043636109
[2026-03-13 17:38:41] 2026-03-13 16:37:51,016 | INFO     | task id: 48955006
[2026-03-13 17:38:41] 2026-03-13 16:37:51,016 | INFO     | errors: (none)
[2026-03-13 17:38:41] 2026-03-13 16:37:51,016 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 17:38:41] 2026-03-13 16:37:51,016 | INFO     | pilot state: finished 
[2026-03-13 17:38:41] 2026-03-13 16:37:51,016 | INFO     | transexitcode: 0
[2026-03-13 17:38:41] 2026-03-13 16:37:51,017 | INFO     | exeerrorcode: 0
[2026-03-13 17:38:41] 2026-03-13 16:37:51,017 | INFO     | exeerrordiag: 
[2026-03-13 17:38:41] 2026-03-13 16:37:51,017 | INFO     | exitcode: 0
[2026-03-13 17:38:41] 2026-03-13 16:37:51,017 | INFO     | exitmsg: OK
[2026-03-13 17:38:41] 2026-03-13 16:37:51,018 | INFO     | cpuconsumptiontime: 49628 s
[2026-03-13 17:38:41] 2026-03-13 16:37:51,018 | INFO     | nevents: 400
[2026-03-13 17:38:41] 2026-03-13 16:37:51,018 | INFO     | neventsw: 0
[2026-03-13 17:38:41] 2026-03-13 16:37:51,018 | INFO     | pid: 29768
[2026-03-13 17:38:41] 2026-03-13 16:37:51,018 | INFO     | pgrp: 29768
[2026-03-13 17:38:41] 2026-03-13 16:37:51,018 | INFO     | corecount: 8
[2026-03-13 17:38:41] 2026-03-13 16:37:51,018 | INFO     | event service: False
[2026-03-13 17:38:41] 2026-03-13 16:37:51,019 | INFO     | sizes: {0: 2279744, 1: 2280201, 2: 2280261, 12: 2280289, 12977: 2310436, 12982: 2319436, 12986: 2319620, 12988: 2319814}
[2026-03-13 17:38:41] 2026-03-13 16:37:51,019 | INFO     | --------------------------------------------------
[2026-03-13 17:38:41] 2026-03-13 16:37:51,019 | INFO     | 
[2026-03-13 17:38:41] 2026-03-13 16:37:51,019 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-13 17:38:41] 2026-03-13 16:37:51,252 | INFO     | time since job start (13001s) is within the limit (345600.0s)
[2026-03-13 17:38:41] 2026-03-13 16:37:51,536 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,536 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,536 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,536 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,538 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,538 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 17:38:41] 2026-03-13 16:37:51,538 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,538 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 17:38:41] 2026-03-13 16:37:51,538 | INFO     | job 7043636109 has completed (purged errors)
[2026-03-13 17:38:41] 2026-03-13 16:37:51,538 | INFO     | overall cleanup function is called
[2026-03-13 17:38:41] 2026-03-13 16:37:52,547 | INFO     | --- collectZombieJob: --- 10, [29768]
[2026-03-13 17:38:41] 2026-03-13 16:37:52,548 | INFO     | zombie collector waiting for pid 29768
[2026-03-13 17:38:41] 2026-03-13 16:37:52,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 17:38:41] 2026-03-13 16:37:52,548 | INFO     | collected zombie processes
[2026-03-13 17:38:41] 2026-03-13 16:37:52,548 | INFO     | will attempt to kill all subprocesses of pid=29768
[2026-03-13 17:38:41] 2026-03-13 16:37:52,653 | INFO     | process IDs to be killed: [29768] (in reverse order)
[2026-03-13 17:38:41] 2026-03-13 16:37:53,098 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 17:38:41] 2026-03-13 16:37:53,098 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 17:38:41] 2026-03-13 16:37:53,101 | INFO     | did not find any defunct processes belonging to 29768
[2026-03-13 17:38:41] 2026-03-13 16:37:53,104 | INFO     | did not find any defunct processes belonging to 29768
[2026-03-13 17:38:41] 2026-03-13 16:37:53,104 | INFO     | ready for new job
[2026-03-13 17:38:41] 2026-03-13 16:37:53,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 17:38:41] 2026-03-13 16:37:53,106 | INFO     | **************************************
[2026-03-13 17:38:41] 2026-03-13 16:37:53,106 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 17:38:41] 2026-03-13 16:37:53,106 | INFO     | **************************************
[2026-03-13 17:38:41] 2026-03-13 16:37:53,106 | INFO     | 
[2026-03-13 17:38:41] 2026-03-13 16:37:53,107 | INFO     | pilot is running in a VM
[2026-03-13 17:38:41] 2026-03-13 16:37:53,107 | INFO     | architecture information:
[2026-03-13 17:38:41] 2026-03-13 16:37:53,112 | INFO     | executing command: cat /etc/os-release
[2026-03-13 17:38:41] 2026-03-13 16:37:53,352 | INFO     | cat /etc/os-release:
[2026-03-13 17:38:41] NAME="CentOS Linux"
[2026-03-13 17:38:41] VERSION="7 (Core)"
[2026-03-13 17:38:41] ID="centos"
[2026-03-13 17:38:41] ID_LIKE="rhel fedora"
[2026-03-13 17:38:41] VERSION_ID="7"
[2026-03-13 17:38:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 17:38:41] ANSI_COLOR="0;31"
[2026-03-13 17:38:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 17:38:41] HOME_URL="https://www.centos.org/"
[2026-03-13 17:38:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 17:38:41] 
[2026-03-13 17:38:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 17:38:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 17:38:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 17:38:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 17:38:41] 
[2026-03-13 17:38:41] 2026-03-13 16:37:53,352 | INFO     | **************************************
[2026-03-13 17:38:41] 2026-03-13 16:37:53,856 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-13 17:38:41] 2026-03-13 16:37:54,110 | INFO     | sufficient remaining disk space (495771975680 B)
[2026-03-13 17:38:41] 2026-03-13 16:37:54,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 17:38:41] 2026-03-13 16:37:54,110 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 17:38:41] 2026-03-13 16:37:54,111 | INFO     | update_server=False
[2026-03-13 17:38:41] 2026-03-13 16:37:54,111 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 17:38:41] 2026-03-13 16:37:54,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 17:38:41] 2026-03-13 16:37:54,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 17:38:41] 2026-03-13 16:37:54,549 | INFO     | all payload control threads have been joined
[2026-03-13 17:38:41] 2026-03-13 16:37:54,755 | INFO     | all job control threads have been joined
[2026-03-13 17:38:41] 2026-03-13 16:37:54,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 17:38:41] 2026-03-13 16:37:54,954 | INFO     | aborting loop
[2026-03-13 17:38:41] 2026-03-13 16:37:54,979 | INFO     | all data control threads have been joined
[2026-03-13 17:38:41] 2026-03-13 16:37:55,117 | INFO     | [job] retrieve thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:55,196 | INFO     | [job] validate thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:55,247 | INFO     | [payload] validate_post thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:55,270 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:55,287 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:55,498 | INFO     | [data] copytool_in thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:55,555 | INFO     | [payload] control thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:55,595 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:55,761 | INFO     | [job] control thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:55,924 | INFO     | [payload] failed_post thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:55,959 | INFO     | [job] job monitor thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:55,985 | INFO     | [data] control thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:56,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 17:38:41] 2026-03-13 16:37:56,120 | INFO     | [data] copytool_out thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:56,565 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:57,038 | INFO     | [job] queue monitor thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:37:58,485 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 17:38:41] 2026-03-13 16:38:24,412 | INFO     | PID=25287 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 17:38:41] 2026-03-13 16:38:24,412 | INFO     | .. there are 9 such processes running
[2026-03-13 17:38:41] 2026-03-13 16:38:24,414 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 17:38:41] 2026-03-13 16:38:24,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 17:38:41] 2026-03-13 16:38:24,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 17:38:41] 2026-03-13 16:38:31,950 | INFO     | [monitor] cgroup control has ended
[2026-03-13 17:38:41] 2026-03-13 16:38:32,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577620838208)>', '<ExcThread(monitor, started 140577333032704)>']
[2026-03-13 17:38:41] 2026-03-13 16:38:32,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 17:38:41] 2026-03-13 16:38:32,462 | INFO     | [monitor] control thread has ended
[2026-03-13 17:38:41] 2026-03-13 16:38:37,227 | INFO     | all workflow threads have been joined
[2026-03-13 17:38:41] 2026-03-13 16:38:37,228 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 17:38:41] 2026-03-13 16:38:37,228 | INFO     | traces error code: 0
[2026-03-13 17:38:41] 2026-03-13 16:38:37,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 17:38:41] 2026-03-13 16:38:37,497 [wrapper] ==== pilot stdout END ====
[2026-03-13 17:38:41] 2026-03-13 16:38:37,550 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 17:38:41] 2026-03-13 16:38:37,620 [wrapper] pilotpid: 25287
[2026-03-13 17:38:41] 2026-03-13 16:38:37,727 [wrapper] Pilot exit status: 0
[2026-03-13 17:38:41] 2026-03-13 16:38:38,043 [wrapper] pandaids: 7043636109
[2026-03-13 17:38:41] 2026-03-13 16:38:38,310 [wrapper] cleanup supervisor_pilot  4795 25288
[2026-03-13 17:38:41] 2026-03-13 16:38:38,431 [wrapper] Test setup, not cleaning
[2026-03-13 17:38:41] 2026-03-13 16:38:38,522 [wrapper] apfmon messages muted
[2026-03-13 17:38:41] 2026-03-13 16:38:38,655 [wrapper] ==== wrapper stdout END ====
[2026-03-13 17:38:41] 2026-03-13 16:38:38,738 [wrapper] ==== wrapper stderr END ====
[2026-03-13 17:38:41]  *** Error codes and diagnostics ***
[2026-03-13 17:38:41]     "exeErrorCode": 0,
[2026-03-13 17:38:41]     "exeErrorDiag": "",
[2026-03-13 17:38:41]     "pilotErrorCode": 0,
[2026-03-13 17:38:41]     "pilotErrorDiag": "",
[2026-03-13 17:38:41]  *** Listing of results directory ***
[2026-03-13 17:38:41] total 622084
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc    585013 Mar 13 00:01 pilot3.tar.gz
[2026-03-13 17:38:41] -rwx------. 1 boinc boinc     36322 Mar 13 00:02 runpilot2-wrapper.sh
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc      5111 Mar 13 00:03 queuedata.json
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc       100 Mar 13 13:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 17:38:41] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 13:55 run_atlas
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc       105 Mar 13 13:55 job.xml
[2026-03-13 17:38:41] -rw-r--r--. 2 boinc boinc 439414815 Mar 13 13:55 EVNT.46701403._000977.pool.root.1
[2026-03-13 17:38:41] -rw-r--r--. 2 boinc boinc     15845 Mar 13 13:55 start_atlas.sh
[2026-03-13 17:38:41] drwxrwx--x. 2 boinc boinc        68 Mar 13 13:55 shared
[2026-03-13 17:38:41] -rw-r--r--. 2 boinc boinc    597532 Mar 13 13:55 input.tar.gz
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc      6392 Mar 13 13:55 init_data.xml
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc         0 Mar 13 13:55 boinc_lockfile
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc      2565 Mar 13 13:56 pandaJob.out
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc       415 Mar 13 14:01 workernode_map.json
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc   1006473 Mar 13 14:01 agis_schedconf.cvmfs.json
[2026-03-13 17:38:41] drwx------. 5 boinc boinc      4096 Mar 13 14:01 pilot3
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc 189064201 Mar 13 17:36 HITS.48955006._049362.pool.root.1
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc       532 Mar 13 17:36 boinc_task_state.xml
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc      1013 Mar 13 17:37 memory_monitor_summary.json
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc   1511579 Mar 13 17:37 agis_ddmendpoints.agis.ALL.json
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc    472247 Mar 13 17:37 log.48955006._049362.job.log.tgz.1
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc      6322 Mar 13 17:37 heartbeat.json
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc        95 Mar 13 17:38 pilot_heartbeat.json
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc        28 Mar 13 17:38 wrapper_checkpoint.txt
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc      8192 Mar 13 17:38 boinc_mmap_file
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc      4881 Mar 13 17:38 pilotlog.txt
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc   1829379 Mar 13 17:38 log.48955006._049362.job.log.1
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc       357 Mar 13 17:38 output.list
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc       620 Mar 13 17:38 runtime_log
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc   2324480 Mar 13 17:38 result.tar.gz
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc      8832 Mar 13 17:38 runtime_log.err
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc       654 Mar 13 17:38 5arLDm5D4K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmdYlLDmTBmEGn.diag
[2026-03-13 17:38:41] -rw-r--r--. 1 boinc boinc     20724 Mar 13 17:38 stderr.txt
[2026-03-13 17:38:41] HITS file was successfully produced:
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc 189064201 Mar 13 17:36 shared/HITS.pool.root.1
[2026-03-13 17:38:41]  *** Contents of shared directory: ***
[2026-03-13 17:38:41] total 616628
[2026-03-13 17:38:41] -rw-r--r--. 2 boinc boinc 439414815 Mar 13 13:55 ATLAS.root_0
[2026-03-13 17:38:41] -rw-r--r--. 2 boinc boinc     15845 Mar 13 13:55 start_atlas.sh
[2026-03-13 17:38:41] -rw-r--r--. 2 boinc boinc    597532 Mar 13 13:55 input.tar.gz
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc 189064201 Mar 13 17:36 HITS.pool.root.1
[2026-03-13 17:38:41] -rw-------. 1 boinc boinc   2324480 Mar 13 17:38 result.tar.gz
17:38:43 (21199): run_atlas exited; CPU time 49817.869982
17:38:43 (21199): called boinc_finish(0)

</stderr_txt>
]]>

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