Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-13 20:23:11 (14708): vboxwrapper version 26210
2026-03-13 20:23:11 (14708): BOINC client version: 8.2.8
2026-03-13 20:23:13 (14708): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-03-13 20:23:13 (14708): Successfully copied 'init_data.xml' to the shared directory.
2026-03-13 20:23:14 (14708): Create VM. (boinc_82407daf4956e1b3, slot#0)
2026-03-13 20:23:14 (14708): Setting Memory Size for VM. (4800MB)
2026-03-13 20:23:15 (14708): Setting CPU Count for VM. (8)
2026-03-13 20:23:15 (14708): Setting Chipset Options for VM.
2026-03-13 20:23:15 (14708): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-13 20:23:15 (14708): Setting Boot Options for VM.
2026-03-13 20:23:16 (14708): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-13 20:23:16 (14708): Enabling VM Network Access.
2026-03-13 20:23:17 (14708): Disabling USB Support for VM.
2026-03-13 20:23:17 (14708): Disabling COM Port Support for VM.
2026-03-13 20:23:17 (14708): Disabling LPT Port Support for VM.
2026-03-13 20:23:18 (14708): Disabling Audio Support for VM.
2026-03-13 20:23:18 (14708): Disabling Clipboard Support for VM.
2026-03-13 20:23:18 (14708): Disabling Drag and Drop Support for VM.
2026-03-13 20:23:18 (14708): Adding storage controller(s) to VM.
2026-03-13 20:23:19 (14708): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-13 20:23:21 (14708): Adding VirtualBox Guest Additions to VM.
2026-03-13 20:23:21 (14708): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-13 20:23:22 (14708): forwarding host port 53545 to guest port 80
2026-03-13 20:23:22 (14708): Enabling remote desktop for VM.
2026-03-13 20:23:22 (14708): Required extension pack not installed, remote desktop not enabled.
2026-03-13 20:23:22 (14708): Enabling shared directory for VM.
2026-03-13 20:23:23 (14708): Starting VM using VBoxManage interface. (boinc_82407daf4956e1b3, slot#0)
2026-03-13 20:23:28 (14708): Successfully started VM. (PID = '512')
2026-03-13 20:23:28 (14708): Reporting VM Process ID to BOINC.
2026-03-13 20:23:28 (14708): Guest Log: BIOS: VirtualBox 7.2.6
2026-03-13 20:23:28 (14708): Guest Log: CPUID EDX: 0x178bfbff
2026-03-13 20:23:28 (14708): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-13 20:23:28 (14708): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-13 20:23:28 (14708): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-13 20:23:28 (14708): Detected: Web Application Enabled (http://localhost:53545)
2026-03-13 20:23:28 (14708): Preference change detected
2026-03-13 20:23:28 (14708): Setting CPU throttle for VM. (100%)
2026-03-13 20:23:29 (14708): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-13 20:23:30 (14708): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-13 20:23:30 (14708): Guest Log: BIOS: Booting from Hard Disk...
2026-03-13 20:23:33 (14708): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-13 20:23:33 (14708): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-13 20:23:33 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-13 20:23:34 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-13 20:23:34 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-13 20:23:34 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-13 20:23:34 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-13 20:23:34 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-13 20:23:34 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-13 20:23:34 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-13 20:23:34 (14708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-13 20:23:34 (14708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-13 20:24:39 (14708): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-13 20:24:39 (14708): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-13 20:24:56 (14708): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-13 20:24:56 (14708): Guest Log: 00:00:00.000141 main     Log opened 2026-03-13T20:24:54.448353000Z
2026-03-13 20:24:56 (14708): Guest Log: 00:00:00.000240 main     OS Product: Linux
2026-03-13 20:24:56 (14708): Guest Log: 00:00:00.000270 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-13 20:24:57 (14708): Guest Log: 00:00:00.000294 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-13 20:24:57 (14708): Guest Log: 00:00:00.000318 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-13 20:24:57 (14708): Guest Log: 00:00:00.000318 main     Process ID: 1372
2026-03-13 20:24:57 (14708): Guest Log: 00:00:00.000318 main     Package type: LINUX_64BITS_GENERIC
2026-03-13 20:24:57 (14708): Guest Log: 00:00:00.000888 main     5.2.32 r132073 started. Verbose level = 0
2026-03-13 20:24:57 (14708): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-13 20:24:57 (14708): Guest Log: [INFO] Mounting shared directory
2026-03-13 20:24:57 (14708): Guest Log: [INFO] Checking for init_data.xml
2026-03-13 20:25:07 (14708): Guest Log: 00:00:10.003443 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 800 859 460 000ns (GuestNow=1 773 422 693 591 073 000 ns GuestLast=1 773 433 494 450 533 000 ns fSetTimeLastLoop=true )
2026-03-13 20:26:27 (14708): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-13 20:26:27 (14708): Guest Log: [INFO] Detected branch: prod
2026-03-13 20:26:28 (14708): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-13 20:26:28 (14708): Guest Log: Copying input files
2026-03-13 20:26:28 (14708): Guest Log: Copied input files into RunAtlas.
2026-03-13 20:26:29 (14708): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-13 20:26:29 (14708): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-13 20:26:29 (14708): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-13 20:26:29 (14708): Guest Log: Further information can be found at the LHC@home message board.
2026-03-13 20:28:14 (14708): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-13 20:28:14 (14708): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-13 20:28:14 (14708): Guest Log: 2.6.3.0 1700 2 30172 157249 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-13 20:28:18 (14708): Guest Log: copied the webapp to /var/www
2026-03-13 20:28:18 (14708): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-13 20:28:18 (14708): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-13 20:28:18 (14708): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-13 20:28:18 (14708): Guest Log:  *** Starting ATLAS job. (PandaID=7052936273 taskID=48967085) ***
2026-03-13 22:03:33 (14708): Status Report: Elapsed Time: '6000.000000'
2026-03-13 22:03:33 (14708): Status Report: CPU Time: '35670.640625'
2026-03-13 22:25:24 (14708): Guest Log:  *** Job finished ***
2026-03-13 22:25:24 (14708): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:24:14,374 | INFO     | [job] queue monitor thread has finished
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:24:16,755 | INFO     | [data] queue_monitor thread has finished
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:01,982 | INFO     | [monitor] cgroup control has ended
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:02,440 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200364812096)>', '<ExcThread(monitor, started 140199929566976)>']
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:02,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:02,587 | INFO     | [monitor] control thread has ended
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,446 | INFO     | all workflow threads have been joined
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,446 | INFO     | end of generic workflow (traces error code: 0)
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,446 | INFO     | traces error code: 0
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,574 [wrapper] ==== pilot stdout END ====
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,578 [wrapper] ==== wrapper stdout RESUME ====
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,582 [wrapper] pilotpid: 6225
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,586 [wrapper] Pilot exit status: 0
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,703 [wrapper] pandaids: 7052936273
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,733 [wrapper] cleanup supervisor_pilot 25919 6226
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,738 [wrapper] Test setup, not cleaning
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,742 [wrapper] apfmon messages muted
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,747 [wrapper] ==== wrapper stdout END ====
2026-03-13 22:25:24 (14708): Guest Log: 2026-03-13 19:25:07,751 [wrapper] ==== wrapper stderr END ====
2026-03-13 22:25:24 (14708): Guest Log:  *** Error codes and diagnostics ***
2026-03-13 22:25:24 (14708): Guest Log:     "exeErrorCode": 0,
2026-03-13 22:25:24 (14708): Guest Log:     "exeErrorDiag": "",
2026-03-13 22:25:24 (14708): Guest Log:     "pilotErrorCode": 0,
2026-03-13 22:25:24 (14708): Guest Log:     "pilotErrorDiag": "",
2026-03-13 22:25:24 (14708): Guest Log:  *** Listing of results directory ***
2026-03-13 22:25:24 (14708): Guest Log: total 207520
2026-03-13 22:25:24 (14708): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 13 04:05 pilot3.tar.gz
2026-03-13 22:25:24 (14708): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 13 04:09 queuedata.json
2026-03-13 22:25:24 (14708): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 13 04:09 runpilot2-wrapper.sh
2026-03-13 22:25:24 (14708): Guest Log: -rwxr-xr-x. 1 atlas atlas      5611 Mar 13 17:26 init_data.xml
2026-03-13 22:25:24 (14708): Guest Log: -rwxr-xr-x. 1 atlas atlas    597531 Mar 13 17:26 input.tar.gz
2026-03-13 22:25:24 (14708): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 13 17:26 start_atlas.sh
2026-03-13 22:25:24 (14708): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 13 17:26 EVNT.48967083._000675.pool.root.1 -> /data/./ATLAS.root_0
2026-03-13 22:25:24 (14708): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Mar 13 17:28 pandaJob.out
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 13 17:36 agis_ddmendpoints.agis.ALL.json
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas       421 Mar 13 17:36 workernode_map.json
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas   1006589 Mar 13 17:37 agis_schedconf.cvmfs.json
2026-03-13 22:25:24 (14708): Guest Log: drwx------. 5 atlas atlas      4096 Mar 13 17:37 pilot3
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas 206114143 Mar 13 19:23 HITS.48967085._018249.pool.root.1
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas      1025 Mar 13 19:24 memory_monitor_summary.json
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas    358821 Mar 13 19:24 log.48967085._018249.job.log.tgz.1
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas      6341 Mar 13 19:24 heartbeat.json
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas        95 Mar 13 19:24 pilot_heartbeat.json
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas      4608 Mar 13 19:25 pilotlog.txt
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas    904789 Mar 13 19:25 log.48967085._018249.job.log.1
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas       357 Mar 13 19:25 output.list
2026-03-13 22:25:24 (14708): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 13 19:25 runtime_log
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas   1280000 Mar 13 19:25 result.tar.gz
2026-03-13 22:25:24 (14708): Guest Log: -rw-r--r--. 1 atlas atlas      8739 Mar 13 19:25 runtime_log.err
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas       649 Mar 13 19:25 CxaKDmM18K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqaoLDmjHGHEo.diag
2026-03-13 22:25:24 (14708): Guest Log: Looking for outputfile HITS.48967085._018249.pool.root.1
2026-03-13 22:25:24 (14708): Guest Log: HITS file was successfully produced
2026-03-13 22:25:24 (14708): Guest Log: -rw-------. 1 atlas atlas 206114143 Mar 13 19:23 /home/atlas/RunAtlas/HITS.48967085._018249.pool.root.1
2026-03-13 22:25:27 (14708): Guest Log: Successfully finished the ATLAS job!
2026-03-13 22:25:27 (14708): Guest Log: Copying the results back to the shared directory!
2026-03-13 22:25:27 (14708): Guest Log:  *** Contents of shared directory: ***
2026-03-13 22:25:28 (14708): Guest Log: total 413560
2026-03-13 22:25:28 (14708): Guest Log: -rwxrwxrwx. 1 root root 215465334 Mar 13 17:23 ATLAS.root_0
2026-03-13 22:25:28 (14708): Guest Log: -rwxrwxrwx. 1 root root 206114143 Mar 13  2026 HITS.pool.root.1
2026-03-13 22:25:28 (14708): Guest Log: -rwxrwxrwx. 1 root root      5611 Mar 13 17:23 init_data.xml
2026-03-13 22:25:28 (14708): Guest Log: -rwxrwxrwx. 1 root root    597531 Mar 13 09:53 input.tar.gz
2026-03-13 22:25:28 (14708): Guest Log: -rwxrwxrwx. 1 root root   1280000 Mar 13  2026 result.tar.gz
2026-03-13 22:25:28 (14708): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 13 09:53 start_atlas.sh
2026-03-13 22:25:28 (14708): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-13 22:25:28 (14708): VM Completion File Detected.
2026-03-13 22:25:28 (14708): Powering off VM.
2026-03-13 22:25:35 (14708): Successfully stopped VM.
2026-03-13 22:25:35 (14708): Deregistering VM. (boinc_82407daf4956e1b3, slot#0)
2026-03-13 22:25:36 (14708): Removing network bandwidth throttle group from VM.
2026-03-13 22:25:36 (14708): Removing VM from VirtualBox.
2026-03-13 22:25:42 (14708): called boinc_finish(0)

</stderr_txt>
]]>

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