Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:22:30 (21456): wrapper (7.7.26015): starting
18:22:30 (21456): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 18:22:30] Arguments: --nthreads 8
[2026-03-13 18:22:30] Threads: 8
[2026-03-13 18:22:30] Checking for CVMFS
[2026-03-13 18:22:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 18:22:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 18:22:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 18:22:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 18:22:34] 2.11.2.0 27453 25012 103968 157249 1 53 18131035 25165824 4834 130560 155 6835109 99.879 2617674 121 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 18:22:34] CVMFS is ok
[2026-03-13 18:22:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 18:22:34] Checking for apptainer binary...
[2026-03-13 18:22:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 18:22:34] Running /usr/bin/apptainer --version
[2026-03-13 18:22:34] apptainer version 1.3.2-1.el7
[2026-03-13 18:22:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 18:23:12] cg-vwn459.simple-grid.lan
[2026-03-13 18:23:12] apptainer works
[2026-03-13 18:23:12] Set ATHENA_PROC_NUMBER=8
[2026-03-13 18:23:12] Set ATHENA_CORE_NUMBER=8
[2026-03-13 18:23:12] Starting ATLAS job with PandaID=7052936257
[2026-03-13 18:23:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 23:01:51]  *** The last 200 lines of the pilot log: ***
[2026-03-13 23:01:51] 2026-03-13 22:00:57,464 | INFO     | job 7052936257 has finished - writing final server update
[2026-03-13 23:01:51] 2026-03-13 22:00:57,464 | INFO     | total number of processed events: 400 (read)
[2026-03-13 23:01:51] 2026-03-13 22:00:57,466 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7052936257/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 23:01:51] 2026-03-13 22:00:57,467 | INFO     | extracted standard info from prmon json
[2026-03-13 23:01:51] 2026-03-13 22:00:57,467 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 23:01:51] 2026-03-13 22:00:57,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 23:01:51] 2026-03-13 22:00:57,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 23:01:51] 2026-03-13 22:00:57,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 23:01:51] 2026-03-13 22:00:57,473 | INFO     | fitting pss+swap vs Time
[2026-03-13 23:01:51] 2026-03-13 22:00:57,474 | INFO     | sum of square deviations: 5770452380.0
[2026-03-13 23:01:51] 2026-03-13 22:00:57,476 | INFO     | sum of deviations: 43851811149.999985
[2026-03-13 23:01:51] 2026-03-13 22:00:57,476 | INFO     | mean x: 1773431185.0
[2026-03-13 23:01:51] 2026-03-13 22:00:57,476 | INFO     | mean y: 2464063.6226415094
[2026-03-13 23:01:51] 2026-03-13 22:00:57,476 | INFO     | intersect: -13474498276.744284
[2026-03-13 23:01:51] 2026-03-13 22:00:57,477 | INFO     | chi2: 5.5624325659143
[2026-03-13 23:01:51] 2026-03-13 22:00:57,477 | INFO     | sum of square deviations: 5449944045.0
[2026-03-13 23:01:51] 2026-03-13 22:00:57,479 | INFO     | sum of deviations: 60420081448.49997
[2026-03-13 23:01:51] 2026-03-13 22:00:57,479 | INFO     | mean x: 1773431032.5
[2026-03-13 23:01:51] 2026-03-13 22:00:57,480 | INFO     | mean y: 2471820.45
[2026-03-13 23:01:51] 2026-03-13 22:00:57,480 | INFO     | intersect: -19658435987.447945
[2026-03-13 23:01:51] 2026-03-13 22:00:57,484 | INFO     | chi2: 4.836541657501566
[2026-03-13 23:01:51] 2026-03-13 22:00:57,484 | INFO     | current chi2=4.836541657501566 (change=13.049882399669489 %)
[2026-03-13 23:01:51] 2026-03-13 22:00:57,485 | INFO     | right removable region: 259
[2026-03-13 23:01:51] 2026-03-13 22:00:57,485 | INFO     | sum of square deviations: 5449944045.0
[2026-03-13 23:01:51] 2026-03-13 22:00:57,487 | INFO     | sum of deviations: -41794875686.5
[2026-03-13 23:01:51] 2026-03-13 22:00:57,487 | INFO     | mean x: 1773431337.5
[2026-03-13 23:01:51] 2026-03-13 22:00:57,487 | INFO     | mean y: 2504753.4730769233
[2026-03-13 23:01:51] 2026-03-13 22:00:57,488 | INFO     | intersect: 13602707191.763603
[2026-03-13 23:01:51] 2026-03-13 22:00:57,488 | INFO     | chi2: 1.487024637637828
[2026-03-13 23:01:51] 2026-03-13 22:00:57,488 | INFO     | current chi2=1.487024637637828 (change=73.26664871858263 %)
[2026-03-13 23:01:51] 2026-03-13 22:00:57,488 | INFO     | sum of square deviations: 5141528960.0
[2026-03-13 23:01:51] 2026-03-13 22:00:57,491 | INFO     | sum of deviations: -64818215212.00001
[2026-03-13 23:01:51] 2026-03-13 22:00:57,491 | INFO     | mean x: 1773431490.0
[2026-03-13 23:01:51] 2026-03-13 22:00:57,491 | INFO     | mean y: 2516046.317647059
[2026-03-13 23:01:51] 2026-03-13 22:00:57,491 | INFO     | intersect: 22359807987.459965
[2026-03-13 23:01:51] 2026-03-13 22:00:57,491 | INFO     | chi2: 1.0029784122265568
[2026-03-13 23:01:51] 2026-03-13 22:00:57,491 | INFO     | current chi2=1.0029784122265568 (change=32.55132518719996 %)
[2026-03-13 23:01:51] 2026-03-13 22:00:57,492 | INFO     | sum of square deviations: 4844974562.5
[2026-03-13 23:01:51] 2026-03-13 22:00:57,494 | INFO     | sum of deviations: -64381246957.999985
[2026-03-13 23:01:51] 2026-03-13 22:00:57,494 | INFO     | mean x: 1773431642.5
[2026-03-13 23:01:51] 2026-03-13 22:00:57,494 | INFO     | mean y: 2515795.416
[2026-03-13 23:01:51] 2026-03-13 22:00:57,494 | INFO     | intersect: 23568323843.74753
[2026-03-13 23:01:51] 2026-03-13 22:00:57,495 | INFO     | chi2: 0.9856854061384615
[2026-03-13 23:01:51] 2026-03-13 22:00:57,495 | INFO     | current chi2=0.9856854061384615 (change=1.7241653336990417 %)
[2026-03-13 23:01:51] 2026-03-13 22:00:57,495 | INFO     | left removable region: 30
[2026-03-13 23:01:51] 2026-03-13 22:00:57,495 | INFO     | sum of square deviations: 3723716330.0
[2026-03-13 23:01:51] 2026-03-13 22:00:57,497 | INFO     | sum of deviations: -21909173274.999996
[2026-03-13 23:01:51] 2026-03-13 22:00:57,497 | INFO     | mean x: 1773431917.0
[2026-03-13 23:01:51] 2026-03-13 22:00:57,497 | INFO     | mean y: 2510680.1004366814
[2026-03-13 23:01:51] 2026-03-13 22:00:57,497 | INFO     | intersect: 10436825143.836296
[2026-03-13 23:01:51] 2026-03-13 22:00:57,498 | INFO     | chi2: 0.13994267236535765
[2026-03-13 23:01:51] 2026-03-13 22:00:57,498 | INFO     | current memory leak: -5.88 B/s (using 229 data points, chi2=0.14)
[2026-03-13 23:01:51] 2026-03-13 22:00:57,498 | INFO     | could have reported an average CPU frequency of 2250 MHz (13 samples)
[2026-03-13 23:01:51] 2026-03-13 22:00:57,499 | INFO     | ..............................
[2026-03-13 23:01:51] 2026-03-13 22:00:57,499 | INFO     | . Timing measurements:
[2026-03-13 23:01:51] 2026-03-13 22:00:57,499 | INFO     | . get job = 0 s
[2026-03-13 23:01:51] 2026-03-13 22:00:57,499 | INFO     | . initial setup = 93 s
[2026-03-13 23:01:51] 2026-03-13 22:00:57,503 | INFO     | . payload setup = 127 s
[2026-03-13 23:01:51] 2026-03-13 22:00:57,503 | INFO     | . stage-in = 0 s
[2026-03-13 23:01:51] 2026-03-13 22:00:57,503 | INFO     | . payload execution = 16215 s
[2026-03-13 23:01:51] 2026-03-13 22:00:57,503 | INFO     | . stage-out = 3 s
[2026-03-13 23:01:51] 2026-03-13 22:00:57,504 | INFO     | . log creation = 1 s
[2026-03-13 23:01:51] 2026-03-13 22:00:57,504 | INFO     | ..............................
[2026-03-13 23:01:51] 2026-03-13 22:00:57,512 | INFO     | time since job start (16365s) is within the limit (345600.0s)
[2026-03-13 23:01:51] 2026-03-13 22:00:57,630 | INFO     | 
[2026-03-13 23:01:51] 2026-03-13 22:00:57,630 | INFO     | job summary report
[2026-03-13 23:01:51] 2026-03-13 22:00:57,630 | INFO     | --------------------------------------------------
[2026-03-13 23:01:51] 2026-03-13 22:00:57,630 | INFO     | PanDA job id: 7052936257
[2026-03-13 23:01:51] 2026-03-13 22:00:57,630 | INFO     | task id: 48967085
[2026-03-13 23:01:51] 2026-03-13 22:00:57,630 | INFO     | errors: (none)
[2026-03-13 23:01:51] 2026-03-13 22:00:57,630 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 23:01:51] 2026-03-13 22:00:57,631 | INFO     | pilot state: finished 
[2026-03-13 23:01:51] 2026-03-13 22:00:57,631 | INFO     | transexitcode: 0
[2026-03-13 23:01:51] 2026-03-13 22:00:57,631 | INFO     | exeerrorcode: 0
[2026-03-13 23:01:51] 2026-03-13 22:00:57,631 | INFO     | exeerrordiag: 
[2026-03-13 23:01:51] 2026-03-13 22:00:57,631 | INFO     | exitcode: 0
[2026-03-13 23:01:51] 2026-03-13 22:00:57,631 | INFO     | exitmsg: OK
[2026-03-13 23:01:51] 2026-03-13 22:00:57,631 | INFO     | cpuconsumptiontime: 63158 s
[2026-03-13 23:01:51] 2026-03-13 22:00:57,631 | INFO     | nevents: 400
[2026-03-13 23:01:51] 2026-03-13 22:00:57,631 | INFO     | neventsw: 0
[2026-03-13 23:01:51] 2026-03-13 22:00:57,631 | INFO     | pid: 30141
[2026-03-13 23:01:51] 2026-03-13 22:00:57,632 | INFO     | pgrp: 30141
[2026-03-13 23:01:51] 2026-03-13 22:00:57,632 | INFO     | corecount: 8
[2026-03-13 23:01:51] 2026-03-13 22:00:57,632 | INFO     | event service: False
[2026-03-13 23:01:51] 2026-03-13 22:00:57,632 | INFO     | sizes: {0: 2279152, 1: 2279837, 2: 2280298, 13: 2280298, 16347: 2311723, 16350: 2320721, 16351: 2320905, 16352: 2321099}
[2026-03-13 23:01:51] 2026-03-13 22:00:57,632 | INFO     | --------------------------------------------------
[2026-03-13 23:01:51] 2026-03-13 22:00:57,632 | INFO     | 
[2026-03-13 23:01:51] 2026-03-13 22:00:57,632 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-13 23:01:51] 2026-03-13 22:00:58,080 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,081 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,081 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,081 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,083 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 23:01:51] 2026-03-13 22:00:58,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,083 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 23:01:51] 2026-03-13 22:00:58,083 | INFO     | job 7052936257 has completed (purged errors)
[2026-03-13 23:01:51] 2026-03-13 22:00:58,083 | INFO     | overall cleanup function is called
[2026-03-13 23:01:51] 2026-03-13 22:00:59,095 | INFO     | --- collectZombieJob: --- 10, [30141]
[2026-03-13 23:01:51] 2026-03-13 22:00:59,095 | INFO     | zombie collector waiting for pid 30141
[2026-03-13 23:01:51] 2026-03-13 22:00:59,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 23:01:51] 2026-03-13 22:00:59,096 | INFO     | collected zombie processes
[2026-03-13 23:01:51] 2026-03-13 22:00:59,096 | INFO     | will attempt to kill all subprocesses of pid=30141
[2026-03-13 23:01:51] 2026-03-13 22:00:59,203 | INFO     | process IDs to be killed: [30141] (in reverse order)
[2026-03-13 23:01:51] 2026-03-13 22:00:59,959 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 23:01:51] 2026-03-13 22:00:59,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 23:01:51] 2026-03-13 22:00:59,962 | INFO     | did not find any defunct processes belonging to 30141
[2026-03-13 23:01:51] 2026-03-13 22:00:59,965 | INFO     | did not find any defunct processes belonging to 30141
[2026-03-13 23:01:51] 2026-03-13 22:00:59,965 | INFO     | ready for new job
[2026-03-13 23:01:51] 2026-03-13 22:00:59,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 23:01:51] 2026-03-13 22:00:59,967 | INFO     | **************************************
[2026-03-13 23:01:51] 2026-03-13 22:00:59,967 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 23:01:51] 2026-03-13 22:00:59,967 | INFO     | **************************************
[2026-03-13 23:01:51] 2026-03-13 22:00:59,967 | INFO     | 
[2026-03-13 23:01:51] 2026-03-13 22:00:59,968 | INFO     | pilot is running in a VM
[2026-03-13 23:01:51] 2026-03-13 22:00:59,968 | INFO     | architecture information:
[2026-03-13 23:01:51] 2026-03-13 22:00:59,972 | INFO     | executing command: cat /etc/os-release
[2026-03-13 23:01:51] 2026-03-13 22:01:00,155 | INFO     | cat /etc/os-release:
[2026-03-13 23:01:51] NAME="CentOS Linux"
[2026-03-13 23:01:51] VERSION="7 (Core)"
[2026-03-13 23:01:51] ID="centos"
[2026-03-13 23:01:51] ID_LIKE="rhel fedora"
[2026-03-13 23:01:51] VERSION_ID="7"
[2026-03-13 23:01:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 23:01:51] ANSI_COLOR="0;31"
[2026-03-13 23:01:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 23:01:51] HOME_URL="https://www.centos.org/"
[2026-03-13 23:01:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 23:01:51] 
[2026-03-13 23:01:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 23:01:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 23:01:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 23:01:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 23:01:51] 
[2026-03-13 23:01:51] 2026-03-13 22:01:00,155 | INFO     | **************************************
[2026-03-13 23:01:51] 2026-03-13 22:01:00,658 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-13 23:01:51] 2026-03-13 22:01:00,783 | INFO     | sufficient remaining disk space (493946404864 B)
[2026-03-13 23:01:51] 2026-03-13 22:01:00,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 23:01:51] 2026-03-13 22:01:00,783 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 23:01:51] 2026-03-13 22:01:00,784 | INFO     | update_server=False
[2026-03-13 23:01:51] 2026-03-13 22:01:00,784 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 23:01:51] 2026-03-13 22:01:01,067 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 23:01:51] 2026-03-13 22:01:01,215 | INFO     | all data control threads have been joined
[2026-03-13 23:01:51] 2026-03-13 22:01:01,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 23:01:51] 2026-03-13 22:01:01,662 | INFO     | aborting loop
[2026-03-13 23:01:51] 2026-03-13 22:01:01,792 | INFO     | [job] retrieve thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:01,981 | INFO     | all job control threads have been joined
[2026-03-13 23:01:51] 2026-03-13 22:01:01,989 | INFO     | [job] validate thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:02,067 | INFO     | [data] copytool_in thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:02,069 | INFO     | all payload control threads have been joined
[2026-03-13 23:01:51] 2026-03-13 22:01:02,179 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:02,221 | INFO     | [data] control thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:02,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 23:01:51] 2026-03-13 22:01:02,668 | INFO     | [job] job monitor thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:02,698 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 23:01:51] 2026-03-13 22:01:02,776 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:02,794 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:02,925 | INFO     | [payload] failed_post thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:02,974 | INFO     | [payload] validate_post thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:02,987 | INFO     | [job] control thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:03,074 | INFO     | [data] copytool_out thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:03,075 | INFO     | [payload] control thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:03,178 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:03,651 | INFO     | [job] queue monitor thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:06,707 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 23:01:51] 2026-03-13 22:01:30,676 | INFO     | PID=25569 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 23:01:51] 2026-03-13 22:01:30,676 | INFO     | .. there are 9 such processes running
[2026-03-13 23:01:51] 2026-03-13 22:01:30,676 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 23:01:51] 2026-03-13 22:01:30,676 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 23:01:51] 2026-03-13 22:01:30,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 23:01:51] 2026-03-13 22:01:40,200 | INFO     | [monitor] cgroup control has ended
[2026-03-13 23:01:51] 2026-03-13 22:01:41,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706580342592)>', '<ExcThread(monitor, started 140706005903104)>']
[2026-03-13 23:01:51] 2026-03-13 22:01:41,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 23:01:51] 2026-03-13 22:01:41,742 | INFO     | [monitor] control thread has ended
[2026-03-13 23:01:51] 2026-03-13 22:01:46,344 | INFO     | all workflow threads have been joined
[2026-03-13 23:01:51] 2026-03-13 22:01:46,344 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 23:01:51] 2026-03-13 22:01:46,345 | INFO     | traces error code: 0
[2026-03-13 23:01:51] 2026-03-13 22:01:46,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 23:01:51] 2026-03-13 22:01:46,672 [wrapper] ==== pilot stdout END ====
[2026-03-13 23:01:51] 2026-03-13 22:01:46,750 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 23:01:51] 2026-03-13 22:01:46,810 [wrapper] pilotpid: 25569
[2026-03-13 23:01:51] 2026-03-13 22:01:46,878 [wrapper] Pilot exit status: 0
[2026-03-13 23:01:51] 2026-03-13 22:01:47,260 [wrapper] pandaids: 7052936257
[2026-03-13 23:01:51] 2026-03-13 22:01:48,202 [wrapper] cleanup supervisor_pilot  6310 25570
[2026-03-13 23:01:51] 2026-03-13 22:01:48,260 [wrapper] Test setup, not cleaning
[2026-03-13 23:01:51] 2026-03-13 22:01:48,342 [wrapper] apfmon messages muted
[2026-03-13 23:01:51] 2026-03-13 22:01:48,416 [wrapper] ==== wrapper stdout END ====
[2026-03-13 23:01:51] 2026-03-13 22:01:48,512 [wrapper] ==== wrapper stderr END ====
[2026-03-13 23:01:51]  *** Error codes and diagnostics ***
[2026-03-13 23:01:51]     "exeErrorCode": 0,
[2026-03-13 23:01:51]     "exeErrorDiag": "",
[2026-03-13 23:01:51]     "pilotErrorCode": 0,
[2026-03-13 23:01:51]     "pilotErrorDiag": "",
[2026-03-13 23:01:51]  *** Listing of results directory ***
[2026-03-13 23:01:51] total 410740
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc    585013 Mar 13 05:05 pilot3.tar.gz
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc      5111 Mar 13 05:09 queuedata.json
[2026-03-13 23:01:51] -rwx------. 1 boinc boinc     36322 Mar 13 05:09 runpilot2-wrapper.sh
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc       100 Mar 13 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 23:01:51] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 18:22 run_atlas
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc       105 Mar 13 18:22 job.xml
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc      6391 Mar 13 18:22 init_data.xml
[2026-03-13 23:01:51] -rw-r--r--. 2 boinc boinc 215465334 Mar 13 18:22 EVNT.48967083._000675.pool.root.1
[2026-03-13 23:01:51] -rw-r--r--. 2 boinc boinc     15845 Mar 13 18:22 start_atlas.sh
[2026-03-13 23:01:51] drwxrwx--x. 2 boinc boinc        68 Mar 13 18:22 shared
[2026-03-13 23:01:51] -rw-r--r--. 2 boinc boinc    597526 Mar 13 18:22 input.tar.gz
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc         0 Mar 13 18:22 boinc_lockfile
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc      2563 Mar 13 18:23 pandaJob.out
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc       413 Mar 13 18:28 workernode_map.json
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc   1006589 Mar 13 18:28 agis_schedconf.cvmfs.json
[2026-03-13 23:01:51] drwx------. 5 boinc boinc      4096 Mar 13 18:28 pilot3
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc 195679854 Mar 13 22:59 HITS.48967085._018233.pool.root.1
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc       531 Mar 13 23:00 boinc_task_state.xml
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc        95 Mar 13 23:00 pilot_heartbeat.json
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc      1011 Mar 13 23:00 memory_monitor_summary.json
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc   1511579 Mar 13 23:00 agis_ddmendpoints.agis.ALL.json
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc    480479 Mar 13 23:00 log.48967085._018233.job.log.tgz.1
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc      6311 Mar 13 23:00 heartbeat.json
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc      8192 Mar 13 23:01 boinc_mmap_file
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc        28 Mar 13 23:01 wrapper_checkpoint.txt
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc      4880 Mar 13 23:01 pilotlog.txt
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc   2282497 Mar 13 23:01 log.48967085._018233.job.log.1
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc       357 Mar 13 23:01 output.list
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc       620 Mar 13 23:01 runtime_log
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc   2785280 Mar 13 23:01 result.tar.gz
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc       655 Mar 13 23:01 WDLKDmM18K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgaoLDmDmcjAo.diag
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc      8816 Mar 13 23:01 runtime_log.err
[2026-03-13 23:01:51] -rw-r--r--. 1 boinc boinc     20722 Mar 13 23:01 stderr.txt
[2026-03-13 23:01:51] HITS file was successfully produced:
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc 195679854 Mar 13 22:59 shared/HITS.pool.root.1
[2026-03-13 23:01:51]  *** Contents of shared directory: ***
[2026-03-13 23:01:51] total 404832
[2026-03-13 23:01:51] -rw-r--r--. 2 boinc boinc 215465334 Mar 13 18:22 ATLAS.root_0
[2026-03-13 23:01:51] -rw-r--r--. 2 boinc boinc     15845 Mar 13 18:22 start_atlas.sh
[2026-03-13 23:01:51] -rw-r--r--. 2 boinc boinc    597526 Mar 13 18:22 input.tar.gz
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc 195679854 Mar 13 22:59 HITS.pool.root.1
[2026-03-13 23:01:51] -rw-------. 1 boinc boinc   2785280 Mar 13 23:01 result.tar.gz
23:01:52 (21456): run_atlas exited; CPU time 63393.521137
23:01:52 (21456): called boinc_finish(0)

</stderr_txt>
]]>

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