Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:39:21 (20603): wrapper (7.7.26015): starting
18:39:21 (20603): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 18:39:21] Arguments: --nthreads 8
[2026-03-13 18:39:21] Threads: 8
[2026-03-13 18:39:21] Checking for CVMFS
[2026-03-13 18:39:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 18:39:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 18:39:23] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 18:39:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 18:39:24] 2.11.2.0 14173 126445 138936 157249 1 53 16289986 25165824 4784 130560 160 39891220 99.819 27424670 982 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 18:39:24] CVMFS is ok
[2026-03-13 18:39:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 18:39:24] Checking for apptainer binary...
[2026-03-13 18:39:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 18:39:24] Running /usr/bin/apptainer --version
[2026-03-13 18:39:24] apptainer version 1.3.2-1.el7
[2026-03-13 18:39:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 18:39:42] cg-vwn375.simple-grid.lan
[2026-03-13 18:39:42] apptainer works
[2026-03-13 18:39:42] Set ATHENA_PROC_NUMBER=8
[2026-03-13 18:39:42] Set ATHENA_CORE_NUMBER=8
[2026-03-13 18:39:42] Starting ATLAS job with PandaID=7052864263
[2026-03-13 18:39:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 23:29:36]  *** The last 200 lines of the pilot log: ***
[2026-03-13 23:29:37] 2026-03-13 22:28:46,026 | INFO     | job 7052864263 has finished - writing final server update
[2026-03-13 23:29:37] 2026-03-13 22:28:46,026 | INFO     | total number of processed events: 400 (read)
[2026-03-13 23:29:37] 2026-03-13 22:28:46,028 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7052864263/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 23:29:37] 2026-03-13 22:28:46,029 | INFO     | extracted standard info from prmon json
[2026-03-13 23:29:37] 2026-03-13 22:28:46,029 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 23:29:37] 2026-03-13 22:28:46,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 23:29:37] 2026-03-13 22:28:46,029 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 23:29:37] 2026-03-13 22:28:46,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 23:29:37] 2026-03-13 22:28:46,034 | INFO     | fitting pss+swap vs Time
[2026-03-13 23:29:37] 2026-03-13 22:28:46,035 | INFO     | sum of square deviations: 6448679050.0
[2026-03-13 23:29:37] 2026-03-13 22:28:46,037 | INFO     | sum of deviations: 71269796398.00002
[2026-03-13 23:29:37] 2026-03-13 22:28:46,038 | INFO     | mean x: 1773432510.0
[2026-03-13 23:29:37] 2026-03-13 22:28:46,038 | INFO     | mean y: 2462073.018181818
[2026-03-13 23:29:37] 2026-03-13 22:28:46,038 | INFO     | intersect: -19597237793.157375
[2026-03-13 23:29:37] 2026-03-13 22:28:46,038 | INFO     | chi2: 3.9175899477998017
[2026-03-13 23:29:37] 2026-03-13 22:28:46,039 | INFO     | sum of square deviations: 6103286527.5
[2026-03-13 23:29:37] 2026-03-13 22:28:46,041 | INFO     | sum of deviations: 69583125444.5
[2026-03-13 23:29:37] 2026-03-13 22:28:46,042 | INFO     | mean x: 1773432357.5
[2026-03-13 23:29:37] 2026-03-13 22:28:46,042 | INFO     | mean y: 2461330.1296296297
[2026-03-13 23:29:37] 2026-03-13 22:28:46,042 | INFO     | intersect: -20216311890.37077
[2026-03-13 23:29:37] 2026-03-13 22:28:46,042 | INFO     | chi2: 3.9208715478529017
[2026-03-13 23:29:37] 2026-03-13 22:28:46,042 | INFO     | current chi2=3.9208715478529017 (change=-0.08376578704830959 %)
[2026-03-13 23:29:37] 2026-03-13 22:28:46,043 | INFO     | right removable region: 269
[2026-03-13 23:29:37] 2026-03-13 22:28:46,043 | INFO     | sum of square deviations: 6103286527.5
[2026-03-13 23:29:37] 2026-03-13 22:28:46,045 | INFO     | sum of deviations: -12716393182.000002
[2026-03-13 23:29:37] 2026-03-13 22:28:46,046 | INFO     | mean x: 1773432662.5
[2026-03-13 23:29:37] 2026-03-13 22:28:46,046 | INFO     | mean y: 2499100.2148148147
[2026-03-13 23:29:37] 2026-03-13 22:28:46,046 | INFO     | intersect: 3697502917.6725903
[2026-03-13 23:29:37] 2026-03-13 22:28:46,046 | INFO     | chi2: 0.31354382666748865
[2026-03-13 23:29:37] 2026-03-13 22:28:46,046 | INFO     | current chi2=0.31354382666748865 (change=91.99651237507433 %)
[2026-03-13 23:29:37] 2026-03-13 22:28:46,047 | INFO     | sum of square deviations: 5770452380.0
[2026-03-13 23:29:37] 2026-03-13 22:28:46,049 | INFO     | sum of deviations: -25664093239.999996
[2026-03-13 23:29:37] 2026-03-13 22:28:46,050 | INFO     | mean x: 1773432815.0
[2026-03-13 23:29:37] 2026-03-13 22:28:46,050 | INFO     | mean y: 2504971.3471698114
[2026-03-13 23:29:37] 2026-03-13 22:28:46,050 | INFO     | intersect: 7889849346.07636
[2026-03-13 23:29:37] 2026-03-13 22:28:46,051 | INFO     | chi2: 0.1392464438535027
[2026-03-13 23:29:37] 2026-03-13 22:28:46,051 | INFO     | current chi2=0.1392464438535027 (change=55.589479999179595 %)
[2026-03-13 23:29:37] 2026-03-13 22:28:46,051 | INFO     | sum of square deviations: 5449944045.0
[2026-03-13 23:29:37] 2026-03-13 22:28:46,054 | INFO     | sum of deviations: -17245840822.000004
[2026-03-13 23:29:37] 2026-03-13 22:28:46,054 | INFO     | mean x: 1773432967.5
[2026-03-13 23:29:37] 2026-03-13 22:28:46,054 | INFO     | mean y: 2500962.3384615383
[2026-03-13 23:29:37] 2026-03-13 22:28:46,054 | INFO     | intersect: 5614364572.947717
[2026-03-13 23:29:37] 2026-03-13 22:28:46,055 | INFO     | chi2: 0.11489124360441323
[2026-03-13 23:29:37] 2026-03-13 22:28:46,055 | INFO     | current chi2=0.11489124360441323 (change=17.490716154096475 %)
[2026-03-13 23:29:37] 2026-03-13 22:28:46,055 | INFO     | left removable region: 30
[2026-03-13 23:29:37] 2026-03-13 22:28:46,056 | INFO     | sum of square deviations: 4233158440.0
[2026-03-13 23:29:37] 2026-03-13 22:28:46,058 | INFO     | sum of deviations: 5128049302.000001
[2026-03-13 23:29:37] 2026-03-13 22:28:46,058 | INFO     | mean x: 1773433242.0
[2026-03-13 23:29:37] 2026-03-13 22:28:46,058 | INFO     | mean y: 2489034.359832636
[2026-03-13 23:29:37] 2026-03-13 22:28:46,058 | INFO     | intersect: -2145848484.228699
[2026-03-13 23:29:37] 2026-03-13 22:28:46,059 | INFO     | chi2: 0.00028316317303078313
[2026-03-13 23:29:37] 2026-03-13 22:28:46,059 | INFO     | current memory leak: 1.21 B/s (using 239 data points, chi2=0.00)
[2026-03-13 23:29:37] 2026-03-13 22:28:46,060 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-13 23:29:37] 2026-03-13 22:28:46,060 | INFO     | ..............................
[2026-03-13 23:29:37] 2026-03-13 22:28:46,060 | INFO     | . Timing measurements:
[2026-03-13 23:29:37] 2026-03-13 22:28:46,060 | INFO     | . get job = 0 s
[2026-03-13 23:29:37] 2026-03-13 22:28:46,060 | INFO     | . initial setup = 99 s
[2026-03-13 23:29:37] 2026-03-13 22:28:46,060 | INFO     | . payload setup = 127 s
[2026-03-13 23:29:37] 2026-03-13 22:28:46,060 | INFO     | . stage-in = 0 s
[2026-03-13 23:29:37] 2026-03-13 22:28:46,060 | INFO     | . payload execution = 16879 s
[2026-03-13 23:29:37] 2026-03-13 22:28:46,061 | INFO     | . stage-out = 2 s
[2026-03-13 23:29:37] 2026-03-13 22:28:46,061 | INFO     | . log creation = 1 s
[2026-03-13 23:29:37] 2026-03-13 22:28:46,061 | INFO     | ..............................
[2026-03-13 23:29:37] 2026-03-13 22:28:46,172 | INFO     | 
[2026-03-13 23:29:37] 2026-03-13 22:28:46,172 | INFO     | job summary report
[2026-03-13 23:29:37] 2026-03-13 22:28:46,172 | INFO     | --------------------------------------------------
[2026-03-13 23:29:37] 2026-03-13 22:28:46,172 | INFO     | PanDA job id: 7052864263
[2026-03-13 23:29:37] 2026-03-13 22:28:46,172 | INFO     | task id: 48967085
[2026-03-13 23:29:37] 2026-03-13 22:28:46,172 | INFO     | errors: (none)
[2026-03-13 23:29:37] 2026-03-13 22:28:46,172 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 23:29:37] 2026-03-13 22:28:46,173 | INFO     | pilot state: finished 
[2026-03-13 23:29:37] 2026-03-13 22:28:46,173 | INFO     | transexitcode: 0
[2026-03-13 23:29:37] 2026-03-13 22:28:46,173 | INFO     | exeerrorcode: 0
[2026-03-13 23:29:37] 2026-03-13 22:28:46,173 | INFO     | exeerrordiag: 
[2026-03-13 23:29:37] 2026-03-13 22:28:46,173 | INFO     | exitcode: 0
[2026-03-13 23:29:37] 2026-03-13 22:28:46,173 | INFO     | exitmsg: OK
[2026-03-13 23:29:37] 2026-03-13 22:28:46,173 | INFO     | cpuconsumptiontime: 66089 s
[2026-03-13 23:29:37] 2026-03-13 22:28:46,173 | INFO     | nevents: 400
[2026-03-13 23:29:37] 2026-03-13 22:28:46,173 | INFO     | neventsw: 0
[2026-03-13 23:29:37] 2026-03-13 22:28:46,173 | INFO     | pid: 29249
[2026-03-13 23:29:37] 2026-03-13 22:28:46,173 | INFO     | pgrp: 29249
[2026-03-13 23:29:37] 2026-03-13 22:28:46,174 | INFO     | corecount: 8
[2026-03-13 23:29:37] 2026-03-13 22:28:46,174 | INFO     | event service: False
[2026-03-13 23:29:37] 2026-03-13 22:28:46,174 | INFO     | sizes: {0: 2279809, 1: 2280270, 12: 2280270, 17010: 2312112, 17011: 2312111, 17014: 2321165, 17015: 2321349, 17016: 2321543}
[2026-03-13 23:29:37] 2026-03-13 22:28:46,174 | INFO     | --------------------------------------------------
[2026-03-13 23:29:37] 2026-03-13 22:28:46,174 | INFO     | 
[2026-03-13 23:29:37] 2026-03-13 22:28:46,174 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-13 23:29:37] 2026-03-13 22:28:46,461 | INFO     | time since job start (17028s) is within the limit (345600.0s)
[2026-03-13 23:29:37] 2026-03-13 22:28:46,559 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,559 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,559 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,559 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,561 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 23:29:37] 2026-03-13 22:28:46,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,561 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 23:29:37] 2026-03-13 22:28:46,561 | INFO     | job 7052864263 has completed (purged errors)
[2026-03-13 23:29:37] 2026-03-13 22:28:46,561 | INFO     | overall cleanup function is called
[2026-03-13 23:29:37] 2026-03-13 22:28:47,570 | INFO     | --- collectZombieJob: --- 10, [29249]
[2026-03-13 23:29:37] 2026-03-13 22:28:47,570 | INFO     | zombie collector waiting for pid 29249
[2026-03-13 23:29:37] 2026-03-13 22:28:47,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 23:29:37] 2026-03-13 22:28:47,570 | INFO     | collected zombie processes
[2026-03-13 23:29:37] 2026-03-13 22:28:47,570 | INFO     | will attempt to kill all subprocesses of pid=29249
[2026-03-13 23:29:37] 2026-03-13 22:28:47,676 | INFO     | process IDs to be killed: [29249] (in reverse order)
[2026-03-13 23:29:37] 2026-03-13 22:28:48,400 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 23:29:37] 2026-03-13 22:28:48,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 23:29:37] 2026-03-13 22:28:48,404 | INFO     | did not find any defunct processes belonging to 29249
[2026-03-13 23:29:37] 2026-03-13 22:28:48,406 | INFO     | did not find any defunct processes belonging to 29249
[2026-03-13 23:29:37] 2026-03-13 22:28:48,413 | INFO     | ready for new job
[2026-03-13 23:29:37] 2026-03-13 22:28:48,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 23:29:37] 2026-03-13 22:28:48,415 | INFO     | **************************************
[2026-03-13 23:29:37] 2026-03-13 22:28:48,416 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 23:29:37] 2026-03-13 22:28:48,416 | INFO     | **************************************
[2026-03-13 23:29:37] 2026-03-13 22:28:48,416 | INFO     | 
[2026-03-13 23:29:37] 2026-03-13 22:28:48,416 | INFO     | pilot is running in a VM
[2026-03-13 23:29:37] 2026-03-13 22:28:48,417 | INFO     | architecture information:
[2026-03-13 23:29:37] 2026-03-13 22:28:48,423 | INFO     | executing command: cat /etc/os-release
[2026-03-13 23:29:37] 2026-03-13 22:28:48,554 | INFO     | cat /etc/os-release:
[2026-03-13 23:29:37] NAME="CentOS Linux"
[2026-03-13 23:29:37] VERSION="7 (Core)"
[2026-03-13 23:29:37] ID="centos"
[2026-03-13 23:29:37] ID_LIKE="rhel fedora"
[2026-03-13 23:29:37] VERSION_ID="7"
[2026-03-13 23:29:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 23:29:37] ANSI_COLOR="0;31"
[2026-03-13 23:29:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 23:29:37] HOME_URL="https://www.centos.org/"
[2026-03-13 23:29:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 23:29:37] 
[2026-03-13 23:29:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 23:29:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 23:29:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 23:29:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 23:29:37] 
[2026-03-13 23:29:37] 2026-03-13 22:28:48,554 | INFO     | **************************************
[2026-03-13 23:29:37] 2026-03-13 22:28:49,058 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-13 23:29:37] 2026-03-13 22:28:49,297 | INFO     | sufficient remaining disk space (494227423232 B)
[2026-03-13 23:29:37] 2026-03-13 22:28:49,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 23:29:37] 2026-03-13 22:28:49,298 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 23:29:37] 2026-03-13 22:28:49,298 | INFO     | update_server=False
[2026-03-13 23:29:37] 2026-03-13 22:28:49,298 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 23:29:37] 2026-03-13 22:28:49,300 | INFO     | all data control threads have been joined
[2026-03-13 23:29:37] 2026-03-13 22:28:49,452 | INFO     | all payload control threads have been joined
[2026-03-13 23:29:37] 2026-03-13 22:28:49,530 | INFO     | all job control threads have been joined
[2026-03-13 23:29:37] 2026-03-13 22:28:49,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 23:29:37] 2026-03-13 22:28:49,535 | INFO     | aborting loop
[2026-03-13 23:29:37] 2026-03-13 22:28:50,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 23:29:37] 2026-03-13 22:28:50,304 | INFO     | [job] retrieve thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:50,309 | INFO     | [data] control thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:50,458 | INFO     | [payload] control thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:50,474 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:50,536 | INFO     | [job] control thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:50,541 | INFO     | [job] job monitor thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:50,778 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:50,794 | INFO     | [job] validate thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:50,932 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:51,185 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 23:29:37] 2026-03-13 22:28:51,312 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:51,445 | INFO     | [data] copytool_in thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:51,536 | INFO     | [payload] failed_post thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:51,586 | INFO     | [payload] validate_post thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:51,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 23:29:37] 2026-03-13 22:28:52,034 | INFO     | [data] copytool_out thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:52,191 | INFO     | [job] queue monitor thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:28:55,678 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 23:29:37] 2026-03-13 22:29:19,614 | INFO     | PID=24715 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 23:29:37] 2026-03-13 22:29:19,614 | INFO     | .. there are 9 such processes running
[2026-03-13 23:29:37] 2026-03-13 22:29:19,615 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 23:29:37] 2026-03-13 22:29:19,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 23:29:37] 2026-03-13 22:29:19,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 23:29:37] 2026-03-13 22:29:26,563 | INFO     | [monitor] cgroup control has ended
[2026-03-13 23:29:37] 2026-03-13 22:29:27,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574304757568)>', '<ExcThread(monitor, started 140573272962816)>']
[2026-03-13 23:29:37] 2026-03-13 22:29:28,671 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 23:29:37] 2026-03-13 22:29:28,671 | INFO     | [monitor] control thread has ended
[2026-03-13 23:29:37] 2026-03-13 22:29:32,704 | INFO     | all workflow threads have been joined
[2026-03-13 23:29:37] 2026-03-13 22:29:32,704 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 23:29:37] 2026-03-13 22:29:32,704 | INFO     | traces error code: 0
[2026-03-13 23:29:37] 2026-03-13 22:29:32,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 23:29:37] 2026-03-13 22:29:32,979 [wrapper] ==== pilot stdout END ====
[2026-03-13 23:29:37] 2026-03-13 22:29:33,067 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 23:29:37] 2026-03-13 22:29:33,176 [wrapper] pilotpid: 24715
[2026-03-13 23:29:37] 2026-03-13 22:29:33,234 [wrapper] Pilot exit status: 0
[2026-03-13 23:29:37] 2026-03-13 22:29:33,776 [wrapper] pandaids: 7052864263
[2026-03-13 23:29:37] 2026-03-13 22:29:34,651 [wrapper] cleanup supervisor_pilot  5693 24716
[2026-03-13 23:29:37] 2026-03-13 22:29:34,712 [wrapper] Test setup, not cleaning
[2026-03-13 23:29:37] 2026-03-13 22:29:34,783 [wrapper] apfmon messages muted
[2026-03-13 23:29:37] 2026-03-13 22:29:34,874 [wrapper] ==== wrapper stdout END ====
[2026-03-13 23:29:37] 2026-03-13 22:29:34,954 [wrapper] ==== wrapper stderr END ====
[2026-03-13 23:29:37]  *** Error codes and diagnostics ***
[2026-03-13 23:29:37]     "exeErrorCode": 0,
[2026-03-13 23:29:37]     "exeErrorDiag": "",
[2026-03-13 23:29:37]     "pilotErrorCode": 0,
[2026-03-13 23:29:37]     "pilotErrorDiag": "",
[2026-03-13 23:29:37]  *** Listing of results directory ***
[2026-03-13 23:29:37] total 406172
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc    585013 Mar 13 05:05 pilot3.tar.gz
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc      5111 Mar 13 05:09 queuedata.json
[2026-03-13 23:29:37] -rwx------. 1 boinc boinc     36322 Mar 13 05:09 runpilot2-wrapper.sh
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc       100 Mar 13 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 23:29:37] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 18:39 run_atlas
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc       105 Mar 13 18:39 job.xml
[2026-03-13 23:29:37] -rw-r--r--. 2 boinc boinc 211915287 Mar 13 18:39 EVNT.48967083._000724.pool.root.1
[2026-03-13 23:29:37] -rw-r--r--. 2 boinc boinc     15845 Mar 13 18:39 start_atlas.sh
[2026-03-13 23:29:37] drwxrwx--x. 2 boinc boinc        68 Mar 13 18:39 shared
[2026-03-13 23:29:37] -rw-r--r--. 2 boinc boinc    597523 Mar 13 18:39 input.tar.gz
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc      6391 Mar 13 18:39 init_data.xml
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc         0 Mar 13 18:39 boinc_lockfile
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc      2563 Mar 13 18:39 pandaJob.out
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc       415 Mar 13 18:44 workernode_map.json
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc   1006589 Mar 13 18:44 agis_schedconf.cvmfs.json
[2026-03-13 23:29:37] drwx------. 5 boinc boinc      4096 Mar 13 18:44 pilot3
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc 194357941 Mar 13 23:27 HITS.48967085._017858.pool.root.1
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc       530 Mar 13 23:27 boinc_task_state.xml
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc      1011 Mar 13 23:28 memory_monitor_summary.json
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc   1511579 Mar 13 23:28 agis_ddmendpoints.agis.ALL.json
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc    496641 Mar 13 23:28 log.48967085._017858.job.log.tgz.1
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc      6311 Mar 13 23:28 heartbeat.json
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc      8192 Mar 13 23:29 boinc_mmap_file
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc        28 Mar 13 23:29 wrapper_checkpoint.txt
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc        95 Mar 13 23:29 pilot_heartbeat.json
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc      4880 Mar 13 23:29 pilotlog.txt
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc   2363814 Mar 13 23:29 log.48967085._017858.job.log.1
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc       357 Mar 13 23:29 output.list
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc       620 Mar 13 23:29 runtime_log
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc   2877440 Mar 13 23:29 result.tar.gz
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc      8816 Mar 13 23:29 runtime_log.err
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc       655 Mar 13 23:29 c3qMDm608K9n9Rq4apOajLDm4fhM0noT9bVooX4SDm12lLDmhieJHo.diag
[2026-03-13 23:29:37] -rw-r--r--. 1 boinc boinc     20755 Mar 13 23:29 stderr.txt
[2026-03-13 23:29:37] HITS file was successfully produced:
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc 194357941 Mar 13 23:27 shared/HITS.pool.root.1
[2026-03-13 23:29:37]  *** Contents of shared directory: ***
[2026-03-13 23:29:37] total 400168
[2026-03-13 23:29:37] -rw-r--r--. 2 boinc boinc 211915287 Mar 13 18:39 ATLAS.root_0
[2026-03-13 23:29:37] -rw-r--r--. 2 boinc boinc     15845 Mar 13 18:39 start_atlas.sh
[2026-03-13 23:29:37] -rw-r--r--. 2 boinc boinc    597523 Mar 13 18:39 input.tar.gz
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc 194357941 Mar 13 23:27 HITS.pool.root.1
[2026-03-13 23:29:37] -rw-------. 1 boinc boinc   2877440 Mar 13 23:29 result.tar.gz
23:29:38 (20603): run_atlas exited; CPU time 66350.172814
23:29:38 (20603): called boinc_finish(0)

</stderr_txt>
]]>

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