Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:24:00 (20102): wrapper (7.7.26015): starting
18:24:00 (20102): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 18:24:00] Arguments: --nthreads 8
[2026-03-13 18:24:00] Threads: 8
[2026-03-13 18:24:00] Checking for CVMFS
[2026-03-13 18:24:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 18:24:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 18:24:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 18:24:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 18:24:04] 2.11.2.0 4234 126431 138744 157249 1 196 18323462 25165825 4457 130560 155 39341078 99.818 28721986 867 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 18:24:04] CVMFS is ok
[2026-03-13 18:24:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 18:24:04] Checking for apptainer binary...
[2026-03-13 18:24:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 18:24:04] Running /usr/bin/apptainer --version
[2026-03-13 18:24:04] apptainer version 1.3.2-1.el7
[2026-03-13 18:24:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 18:24:20] cg-vwn359.simple-grid.lan
[2026-03-13 18:24:20] apptainer works
[2026-03-13 18:24:20] Set ATHENA_PROC_NUMBER=8
[2026-03-13 18:24:20] Set ATHENA_CORE_NUMBER=8
[2026-03-13 18:24:20] Starting ATLAS job with PandaID=7052864113
[2026-03-13 18:24:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 23:31:06]  *** The last 200 lines of the pilot log: ***
[2026-03-13 23:31:06] 2026-03-13 22:30:06,953 | INFO     | preparing for final server update for job 7052864113 in state='finished'
[2026-03-13 23:31:06] 2026-03-13 22:30:06,954 | INFO     | reading metadata from: /var/lib/boinc/slots/14/PanDA_Pilot-7052864113/jobReport.json
[2026-03-13 23:31:06] 2026-03-13 22:30:06,956 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/14/workernode_map.json
[2026-03-13 23:31:06] 2026-03-13 22:30:06,957 | INFO     | this job has now completed (state=finished)
[2026-03-13 23:31:06] 2026-03-13 22:30:06,957 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 23:31:06] 2026-03-13 22:30:06,957 | INFO     | log transfer has been attempted: DONE
[2026-03-13 23:31:06] 2026-03-13 22:30:06,957 | INFO     | job 7052864113 has finished - writing final server update
[2026-03-13 23:31:06] 2026-03-13 22:30:06,957 | INFO     | total number of processed events: 400 (read)
[2026-03-13 23:31:06] 2026-03-13 22:30:06,960 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-7052864113/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 23:31:06] 2026-03-13 22:30:06,960 | INFO     | extracted standard info from prmon json
[2026-03-13 23:31:06] 2026-03-13 22:30:06,961 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 23:31:06] 2026-03-13 22:30:06,961 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 23:31:06] 2026-03-13 22:30:06,961 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 23:31:06] 2026-03-13 22:30:06,961 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 23:31:06] 2026-03-13 22:30:06,967 | INFO     | fitting pss+swap vs Time
[2026-03-13 23:31:06] 2026-03-13 22:30:06,968 | INFO     | sum of square deviations: 7720081493.0
[2026-03-13 23:31:06] 2026-03-13 22:30:06,971 | INFO     | sum of deviations: 30117150427.5
[2026-03-13 23:31:06] 2026-03-13 22:30:06,971 | INFO     | mean x: 1773432090.5
[2026-03-13 23:31:06] 2026-03-13 22:30:06,971 | INFO     | mean y: 2470916.852739726
[2026-03-13 23:31:06] 2026-03-13 22:30:06,971 | INFO     | intersect: -6915943233.434818
[2026-03-13 23:31:06] 2026-03-13 22:30:06,972 | INFO     | chi2: 4.943758767559468
[2026-03-13 23:31:06] 2026-03-13 22:30:06,973 | INFO     | sum of square deviations: 7330250928.0
[2026-03-13 23:31:06] 2026-03-13 22:30:06,975 | INFO     | sum of deviations: 48845483186.00001
[2026-03-13 23:31:06] 2026-03-13 22:30:06,976 | INFO     | mean x: 1773431938.0
[2026-03-13 23:31:06] 2026-03-13 22:30:06,976 | INFO     | mean y: 2478138.68989547
[2026-03-13 23:31:06] 2026-03-13 22:30:06,976 | INFO     | intersect: -11814871739.226099
[2026-03-13 23:31:06] 2026-03-13 22:30:06,976 | INFO     | chi2: 4.202833873455101
[2026-03-13 23:31:06] 2026-03-13 22:30:06,976 | INFO     | current chi2=4.202833873455101 (change=14.987076209427011 %)
[2026-03-13 23:31:06] 2026-03-13 22:30:06,977 | INFO     | right removable region: 286
[2026-03-13 23:31:06] 2026-03-13 22:30:06,977 | INFO     | sum of square deviations: 7330250928.0
[2026-03-13 23:31:06] 2026-03-13 22:30:06,980 | INFO     | sum of deviations: -61184250621.99996
[2026-03-13 23:31:06] 2026-03-13 22:30:06,980 | INFO     | mean x: 1773432243.0
[2026-03-13 23:31:06] 2026-03-13 22:30:06,980 | INFO     | mean y: 2506557.1916376306
[2026-03-13 23:31:06] 2026-03-13 22:30:06,980 | INFO     | intersect: 14805017942.221748
[2026-03-13 23:31:06] 2026-03-13 22:30:06,981 | INFO     | chi2: 1.0781406602138017
[2026-03-13 23:31:06] 2026-03-13 22:30:06,981 | INFO     | current chi2=1.0781406602138017 (change=78.19188372846041 %)
[2026-03-13 23:31:06] 2026-03-13 22:30:06,981 | INFO     | sum of square deviations: 6953769450.5
[2026-03-13 23:31:06] 2026-03-13 22:30:06,984 | INFO     | sum of deviations: -70778037852.5
[2026-03-13 23:31:06] 2026-03-13 22:30:06,985 | INFO     | mean x: 1773432395.5
[2026-03-13 23:31:06] 2026-03-13 22:30:06,985 | INFO     | mean y: 2510416.719858156
[2026-03-13 23:31:06] 2026-03-13 22:30:06,985 | INFO     | intersect: 18053161378.195637
[2026-03-13 23:31:06] 2026-03-13 22:30:06,985 | INFO     | chi2: 0.9921017982691851
[2026-03-13 23:31:06] 2026-03-13 22:30:06,985 | INFO     | current chi2=0.9921017982691851 (change=7.980300263191503 %)
[2026-03-13 23:31:06] 2026-03-13 22:30:06,986 | INFO     | left removable region: 20
[2026-03-13 23:31:06] 2026-03-13 22:30:06,986 | INFO     | sum of square deviations: 5836025702.5
[2026-03-13 23:31:06] 2026-03-13 22:30:06,989 | INFO     | sum of deviations: -34717816360.5
[2026-03-13 23:31:06] 2026-03-13 22:30:06,989 | INFO     | mean x: 1773432517.5
[2026-03-13 23:31:06] 2026-03-13 22:30:06,989 | INFO     | mean y: 2511493.8684210526
[2026-03-13 23:31:06] 2026-03-13 22:30:06,989 | INFO     | intersect: 10552448661.542196
[2026-03-13 23:31:06] 2026-03-13 22:30:06,989 | INFO     | chi2: 0.1779035221892161
[2026-03-13 23:31:06] 2026-03-13 22:30:06,990 | INFO     | current memory leak: -5.95 B/s (using 266 data points, chi2=0.18)
[2026-03-13 23:31:06] 2026-03-13 22:30:06,990 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-13 23:31:06] 2026-03-13 22:30:06,990 | INFO     | ..............................
[2026-03-13 23:31:06] 2026-03-13 22:30:06,991 | INFO     | . Timing measurements:
[2026-03-13 23:31:06] 2026-03-13 22:30:06,991 | INFO     | . get job = 0 s
[2026-03-13 23:31:06] 2026-03-13 22:30:06,991 | INFO     | . initial setup = 103 s
[2026-03-13 23:31:06] 2026-03-13 22:30:06,991 | INFO     | . payload setup = 133 s
[2026-03-13 23:31:06] 2026-03-13 22:30:06,991 | INFO     | . stage-in = 0 s
[2026-03-13 23:31:06] 2026-03-13 22:30:06,991 | INFO     | . payload execution = 17896 s
[2026-03-13 23:31:06] 2026-03-13 22:30:06,991 | INFO     | . stage-out = 3 s
[2026-03-13 23:31:06] 2026-03-13 22:30:06,991 | INFO     | . log creation = 1 s
[2026-03-13 23:31:06] 2026-03-13 22:30:06,991 | INFO     | ..............................
[2026-03-13 23:31:06] 2026-03-13 22:30:07,108 | INFO     | 
[2026-03-13 23:31:06] 2026-03-13 22:30:07,108 | INFO     | job summary report
[2026-03-13 23:31:06] 2026-03-13 22:30:07,108 | INFO     | --------------------------------------------------
[2026-03-13 23:31:06] 2026-03-13 22:30:07,108 | INFO     | PanDA job id: 7052864113
[2026-03-13 23:31:06] 2026-03-13 22:30:07,108 | INFO     | task id: 48967085
[2026-03-13 23:31:06] 2026-03-13 22:30:07,109 | INFO     | errors: (none)
[2026-03-13 23:31:06] 2026-03-13 22:30:07,109 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 23:31:06] 2026-03-13 22:30:07,109 | INFO     | pilot state: finished 
[2026-03-13 23:31:06] 2026-03-13 22:30:07,109 | INFO     | transexitcode: 0
[2026-03-13 23:31:06] 2026-03-13 22:30:07,109 | INFO     | exeerrorcode: 0
[2026-03-13 23:31:06] 2026-03-13 22:30:07,109 | INFO     | exeerrordiag: 
[2026-03-13 23:31:06] 2026-03-13 22:30:07,109 | INFO     | exitcode: 0
[2026-03-13 23:31:06] 2026-03-13 22:30:07,109 | INFO     | exitmsg: OK
[2026-03-13 23:31:06] 2026-03-13 22:30:07,109 | INFO     | cpuconsumptiontime: 69681 s
[2026-03-13 23:31:06] 2026-03-13 22:30:07,109 | INFO     | nevents: 400
[2026-03-13 23:31:06] 2026-03-13 22:30:07,110 | INFO     | neventsw: 0
[2026-03-13 23:31:06] 2026-03-13 22:30:07,110 | INFO     | pid: 28613
[2026-03-13 23:31:06] 2026-03-13 22:30:07,110 | INFO     | pgrp: 28613
[2026-03-13 23:31:06] 2026-03-13 22:30:07,110 | INFO     | corecount: 8
[2026-03-13 23:31:06] 2026-03-13 22:30:07,110 | INFO     | event service: False
[2026-03-13 23:31:06] 2026-03-13 22:30:07,110 | INFO     | sizes: {0: 2279810, 1: 2280271, 18034: 2312393, 18038: 2321393, 18042: 2321643}
[2026-03-13 23:31:06] 2026-03-13 22:30:07,110 | INFO     | --------------------------------------------------
[2026-03-13 23:31:06] 2026-03-13 22:30:07,110 | INFO     | 
[2026-03-13 23:31:06] 2026-03-13 22:30:07,110 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-03-13 23:31:06] 2026-03-13 22:30:07,530 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,530 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,530 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,531 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,532 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 23:31:06] 2026-03-13 22:30:07,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,532 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 23:31:06] 2026-03-13 22:30:07,532 | INFO     | job 7052864113 has completed (purged errors)
[2026-03-13 23:31:06] 2026-03-13 22:30:07,533 | INFO     | overall cleanup function is called
[2026-03-13 23:31:06] 2026-03-13 22:30:08,541 | INFO     | --- collectZombieJob: --- 10, [28613]
[2026-03-13 23:31:06] 2026-03-13 22:30:08,541 | INFO     | zombie collector waiting for pid 28613
[2026-03-13 23:31:06] 2026-03-13 22:30:08,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 23:31:06] 2026-03-13 22:30:08,542 | INFO     | collected zombie processes
[2026-03-13 23:31:06] 2026-03-13 22:30:08,542 | INFO     | will attempt to kill all subprocesses of pid=28613
[2026-03-13 23:31:06] 2026-03-13 22:30:08,654 | INFO     | process IDs to be killed: [28613] (in reverse order)
[2026-03-13 23:31:06] 2026-03-13 22:30:09,172 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 23:31:06] 2026-03-13 22:30:09,173 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 23:31:06] 2026-03-13 22:30:09,176 | INFO     | did not find any defunct processes belonging to 28613
[2026-03-13 23:31:06] 2026-03-13 22:30:09,179 | INFO     | did not find any defunct processes belonging to 28613
[2026-03-13 23:31:06] 2026-03-13 22:30:09,179 | INFO     | ready for new job
[2026-03-13 23:31:06] 2026-03-13 22:30:09,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 23:31:06] 2026-03-13 22:30:09,181 | INFO     | **************************************
[2026-03-13 23:31:06] 2026-03-13 22:30:09,182 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 23:31:06] 2026-03-13 22:30:09,182 | INFO     | **************************************
[2026-03-13 23:31:06] 2026-03-13 22:30:09,182 | INFO     | 
[2026-03-13 23:31:06] 2026-03-13 22:30:09,182 | INFO     | pilot is running in a VM
[2026-03-13 23:31:06] 2026-03-13 22:30:09,183 | INFO     | architecture information:
[2026-03-13 23:31:06] 2026-03-13 22:30:09,190 | INFO     | executing command: cat /etc/os-release
[2026-03-13 23:31:06] 2026-03-13 22:30:09,441 | INFO     | cat /etc/os-release:
[2026-03-13 23:31:06] NAME="CentOS Linux"
[2026-03-13 23:31:06] VERSION="7 (Core)"
[2026-03-13 23:31:06] ID="centos"
[2026-03-13 23:31:06] ID_LIKE="rhel fedora"
[2026-03-13 23:31:06] VERSION_ID="7"
[2026-03-13 23:31:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 23:31:06] ANSI_COLOR="0;31"
[2026-03-13 23:31:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 23:31:06] HOME_URL="https://www.centos.org/"
[2026-03-13 23:31:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 23:31:06] 
[2026-03-13 23:31:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 23:31:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 23:31:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 23:31:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 23:31:06] 
[2026-03-13 23:31:06] 2026-03-13 22:30:09,441 | INFO     | **************************************
[2026-03-13 23:31:06] 2026-03-13 22:30:09,944 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-03-13 23:31:06] 2026-03-13 22:30:10,195 | INFO     | sufficient remaining disk space (495951282176 B)
[2026-03-13 23:31:06] 2026-03-13 22:30:10,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 23:31:06] 2026-03-13 22:30:10,196 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 23:31:06] 2026-03-13 22:30:10,196 | INFO     | update_server=False
[2026-03-13 23:31:06] 2026-03-13 22:30:10,196 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 23:31:06] 2026-03-13 22:30:10,446 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 23:31:06] 2026-03-13 22:30:10,446 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 23:31:06] 2026-03-13 22:30:10,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 23:31:06] 2026-03-13 22:30:10,447 | INFO     | will abort loop
[2026-03-13 23:31:06] 2026-03-13 22:30:10,495 | INFO     | all payload control threads have been joined
[2026-03-13 23:31:06] 2026-03-13 22:30:10,581 | INFO     | all job control threads have been joined
[2026-03-13 23:31:06] 2026-03-13 22:30:10,587 | INFO     | all data control threads have been joined
[2026-03-13 23:31:06] 2026-03-13 22:30:11,201 | INFO     | [job] retrieve thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:11,259 | INFO     | [data] copytool_in thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:11,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 23:31:06] 2026-03-13 22:30:11,401 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:11,419 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:11,452 | INFO     | [job] job monitor thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:11,501 | INFO     | [payload] control thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:11,505 | INFO     | [job] validate thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:11,587 | INFO     | [job] control thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:11,593 | INFO     | [data] control thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:11,638 | INFO     | [payload] validate_post thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:11,998 | INFO     | [payload] failed_post thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:12,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 23:31:06] 2026-03-13 22:30:12,258 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:12,306 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:12,964 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 23:31:06] 2026-03-13 22:30:13,133 | INFO     | [job] queue monitor thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:13,346 | INFO     | [data] copytool_out thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:16,973 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 23:31:06] 2026-03-13 22:30:39,657 | INFO     | PID=24153 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 23:31:06] 2026-03-13 22:30:39,657 | INFO     | .. there are 9 such processes running
[2026-03-13 23:31:06] 2026-03-13 22:30:39,657 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 23:31:06] 2026-03-13 22:30:39,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 23:31:06] 2026-03-13 22:30:39,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 23:31:06] 2026-03-13 22:30:54,474 | INFO     | [monitor] cgroup control has ended
[2026-03-13 23:31:06] 2026-03-13 22:30:55,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335743969088)>', '<ExcThread(monitor, started 140335170713344)>']
[2026-03-13 23:31:06] 2026-03-13 22:30:56,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 23:31:06] 2026-03-13 22:30:56,756 | INFO     | [monitor] control thread has ended
[2026-03-13 23:31:06] 2026-03-13 22:31:00,805 | INFO     | all workflow threads have been joined
[2026-03-13 23:31:06] 2026-03-13 22:31:00,805 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 23:31:06] 2026-03-13 22:31:00,806 | INFO     | traces error code: 0
[2026-03-13 23:31:06] 2026-03-13 22:31:00,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 23:31:06] 2026-03-13 22:31:01,191 [wrapper] ==== pilot stdout END ====
[2026-03-13 23:31:06] 2026-03-13 22:31:01,285 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 23:31:06] 2026-03-13 22:31:01,398 [wrapper] pilotpid: 24153
[2026-03-13 23:31:06] 2026-03-13 22:31:01,499 [wrapper] Pilot exit status: 0
[2026-03-13 23:31:06] 2026-03-13 22:31:01,868 [wrapper] pandaids: 7052864113
[2026-03-13 23:31:06] 2026-03-13 22:31:03,011 [wrapper] cleanup supervisor_pilot 20388 24154
[2026-03-13 23:31:06] 2026-03-13 22:31:03,104 [wrapper] Test setup, not cleaning
[2026-03-13 23:31:06] 2026-03-13 22:31:03,190 [wrapper] apfmon messages muted
[2026-03-13 23:31:06] 2026-03-13 22:31:03,242 [wrapper] ==== wrapper stdout END ====
[2026-03-13 23:31:06] 2026-03-13 22:31:03,273 [wrapper] ==== wrapper stderr END ====
[2026-03-13 23:31:06]  *** Error codes and diagnostics ***
[2026-03-13 23:31:06]     "exeErrorCode": 0,
[2026-03-13 23:31:06]     "exeErrorDiag": "",
[2026-03-13 23:31:06]     "pilotErrorCode": 0,
[2026-03-13 23:31:06]     "pilotErrorDiag": "",
[2026-03-13 23:31:06]  *** Listing of results directory ***
[2026-03-13 23:31:06] total 411868
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc    585013 Mar 13 05:05 pilot3.tar.gz
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc      5111 Mar 13 05:09 queuedata.json
[2026-03-13 23:31:06] -rwx------. 1 boinc boinc     36322 Mar 13 05:09 runpilot2-wrapper.sh
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc       100 Mar 13 18:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 23:31:06] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 18:24 run_atlas
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc       105 Mar 13 18:24 job.xml
[2026-03-13 23:31:06] -rw-r--r--. 2 boinc boinc 212213888 Mar 13 18:24 EVNT.48967083._000718.pool.root.1
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc      6393 Mar 13 18:24 init_data.xml
[2026-03-13 23:31:06] -rw-r--r--. 2 boinc boinc     15845 Mar 13 18:24 start_atlas.sh
[2026-03-13 23:31:06] drwxrwx--x. 2 boinc boinc        68 Mar 13 18:24 shared
[2026-03-13 23:31:06] -rw-r--r--. 2 boinc boinc    597526 Mar 13 18:24 input.tar.gz
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc         0 Mar 13 18:24 boinc_lockfile
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc      2563 Mar 13 18:24 pandaJob.out
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc       415 Mar 13 18:29 workernode_map.json
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc   1006589 Mar 13 18:29 agis_schedconf.cvmfs.json
[2026-03-13 23:31:06] drwx------. 5 boinc boinc      4096 Mar 13 18:29 pilot3
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc 199591751 Mar 13 23:28 HITS.48967085._017708.pool.root.1
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc       530 Mar 13 23:29 boinc_task_state.xml
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc        95 Mar 13 23:29 pilot_heartbeat.json
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc      1014 Mar 13 23:29 memory_monitor_summary.json
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc   1511579 Mar 13 23:30 agis_ddmendpoints.agis.ALL.json
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc    510810 Mar 13 23:30 log.48967085._017708.job.log.tgz.1
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc      6315 Mar 13 23:30 heartbeat.json
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc      8192 Mar 13 23:30 boinc_mmap_file
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc        28 Mar 13 23:30 wrapper_checkpoint.txt
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc      5067 Mar 13 23:31 pilotlog.txt
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc   2500614 Mar 13 23:31 log.48967085._017708.job.log.1
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc       357 Mar 13 23:31 output.list
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc       620 Mar 13 23:31 runtime_log
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc   3031040 Mar 13 23:31 result.tar.gz
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc      8832 Mar 13 23:31 runtime_log.err
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc       655 Mar 13 23:31 9cZMDm508K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmY1lLDmA8Uxgn.diag
[2026-03-13 23:31:06] -rw-r--r--. 1 boinc boinc     20897 Mar 13 23:31 stderr.txt
[2026-03-13 23:31:06] HITS file was successfully produced:
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc 199591751 Mar 13 23:28 shared/HITS.pool.root.1
[2026-03-13 23:31:06]  *** Contents of shared directory: ***
[2026-03-13 23:31:06] total 405720
[2026-03-13 23:31:06] -rw-r--r--. 2 boinc boinc 212213888 Mar 13 18:24 ATLAS.root_0
[2026-03-13 23:31:06] -rw-r--r--. 2 boinc boinc     15845 Mar 13 18:24 start_atlas.sh
[2026-03-13 23:31:06] -rw-r--r--. 2 boinc boinc    597526 Mar 13 18:24 input.tar.gz
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc 199591751 Mar 13 23:28 HITS.pool.root.1
[2026-03-13 23:31:06] -rw-------. 1 boinc boinc   3031040 Mar 13 23:31 result.tar.gz
23:31:08 (20102): run_atlas exited; CPU time 69967.087368
23:31:08 (20102): called boinc_finish(0)

</stderr_txt>
]]>

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