Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:04 (3519585): wrapper (7.7.26015): starting
00:02:04 (3519585): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 00:02:04] Arguments: --nthreads 8
[2026-03-13 00:02:04] Threads: 8
[2026-03-13 00:02:04] Checking for CVMFS
[2026-03-13 00:02:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 00:02:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 00:02:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 00:02:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 00:02:10] 2.13.3.0 8593 109966 421148 157225 2 420 33448373 39288833 27999 16776704 0 267412148 99.590 323281295 30394 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-13 00:02:10] CVMFS is ok
[2026-03-13 00:02:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 00:02:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 00:02:10] Further information can be found at the LHC@home message board.
[2026-03-13 00:02:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 00:02:10] Checking for apptainer binary...
[2026-03-13 00:02:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 00:02:10] Running /usr/bin/apptainer --version
[2026-03-13 00:02:10] apptainer version 1.4.5-2.el9
[2026-03-13 00:02:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 00:02:11] c-211-25.aglt2.org
[2026-03-13 00:02:11] apptainer works
[2026-03-13 00:02:11] Set ATHENA_PROC_NUMBER=8
[2026-03-13 00:02:11] Set ATHENA_CORE_NUMBER=8
[2026-03-13 00:02:11] Starting ATLAS job with PandaID=7043587904
[2026-03-13 00:02:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 00:02:07]  *** The last 200 lines of the pilot log: ***
[2026-03-15 00:02:07] 2026-03-14 12:35:19,721 | INFO     | time since job start (116991s) is within the limit (345600.0s)
[2026-03-15 00:02:07] 2026-03-14 12:35:19,999 | INFO     | monitor loop #4112: job 0:7043587904 is in state 'finished'
[2026-03-15 00:02:07] 2026-03-14 12:35:19,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 00:02:07] 2026-03-14 12:35:20,308 | INFO     | sum of deviations: 1833574899220.9888
[2026-03-15 00:02:07] 2026-03-14 12:35:20,309 | INFO     | mean x: 1773433112.1172774
[2026-03-15 00:02:07] 2026-03-14 12:35:20,309 | INFO     | mean y: 2499114.2366492148
[2026-03-15 00:02:07] 2026-03-14 12:35:20,309 | INFO     | intersect: -1502486633.2085679
[2026-03-15 00:02:07] 2026-03-14 12:35:20,344 | INFO     | chi2: 5.193161994034295
[2026-03-15 00:02:07] 2026-03-14 12:35:20,345 | INFO     | current chi2=5.193161994034295 (change=28.40492028157128 %)
[2026-03-15 00:02:07] 2026-03-14 12:35:20,396 | INFO     | sum of square deviations: 2143709546448.0247
[2026-03-15 00:02:07] 2026-03-14 12:35:21,265 | INFO     | sum of deviations: 1827898290095.3708
[2026-03-15 00:02:07] 2026-03-14 12:35:21,265 | INFO     | mean x: 1773432959.617323
[2026-03-15 00:02:07] 2026-03-14 12:35:21,266 | INFO     | mean y: 2499063.0855643046
[2026-03-15 00:02:07] 2026-03-14 12:35:21,266 | INFO     | intersect: -1509671781.073091
[2026-03-15 00:02:07] 2026-03-14 12:35:21,268 | INFO     | chi2: 5.193048992192738
[2026-03-15 00:02:07] 2026-03-14 12:35:21,269 | INFO     | current chi2=5.193048992192738 (change=0.0021759737456052575 %)
[2026-03-15 00:02:07] 2026-03-14 12:35:21,269 | INFO     | right removable region: 1904
[2026-03-15 00:02:07] 2026-03-14 12:35:21,271 | INFO     | sum of square deviations: 2160632074683.5413
[2026-03-15 00:02:07] 2026-03-14 12:35:21,807 | INFO     | time since job start (116993s) is within the limit (345600.0s)
[2026-03-15 00:02:07] 2026-03-14 12:35:21,931 | INFO     | sum of deviations: 868828303673.74
[2026-03-15 00:02:07] 2026-03-14 12:35:21,931 | INFO     | mean x: 1773433417.1198952
[2026-03-15 00:02:07] 2026-03-14 12:35:21,931 | INFO     | mean y: 2501385.1015706807
[2026-03-15 00:02:07] 2026-03-14 12:35:21,932 | INFO     | intersect: -710627502.2867545
[2026-03-15 00:02:07] 2026-03-14 12:35:21,957 | INFO     | chi2: 3.676315645441245
[2026-03-15 00:02:07] 2026-03-14 12:35:21,958 | INFO     | current chi2=3.676315645441245 (change=49.316791579420446 %)
[2026-03-15 00:02:07] 2026-03-14 12:35:21,973 | INFO     | sum of square deviations: 2143707637761.6296
[2026-03-15 00:02:07] 2026-03-14 12:35:22,600 | INFO     | sum of deviations: 537769640351.90857
[2026-03-15 00:02:07] 2026-03-14 12:35:22,601 | INFO     | mean x: 1773433569.6225722
[2026-03-15 00:02:07] 2026-03-14 12:35:22,601 | INFO     | mean y: 2504366.737007874
[2026-03-15 00:02:07] 2026-03-14 12:35:22,601 | INFO     | intersect: -442378469.02120435
[2026-03-15 00:02:07] 2026-03-14 12:35:22,604 | INFO     | chi2: 2.5382222338407647
[2026-03-15 00:02:07] 2026-03-14 12:35:22,661 | INFO     | current chi2=2.5382222338407647 (change=30.957445479736062 %)
[2026-03-15 00:02:07] 2026-03-14 12:35:22,664 | INFO     | sum of square deviations: 2126871574615.6826
[2026-03-15 00:02:07] 2026-03-14 12:35:22,782 | INFO     | monitor loop #4113: job 0:7043587904 is in state 'finished'
[2026-03-15 00:02:07] 2026-03-14 12:35:22,782 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 00:02:07] 2026-03-14 12:35:23,901 | INFO     | time since job start (116995s) is within the limit (345600.0s)
[2026-03-15 00:02:07] 2026-03-14 12:35:24,889 | INFO     | sum of deviations: 356769224068.0315
[2026-03-15 00:02:07] 2026-03-14 12:35:24,889 | INFO     | mean x: 1773433722.1263158
[2026-03-15 00:02:07] 2026-03-14 12:35:24,890 | INFO     | mean y: 2506006.187368421
[2026-03-15 00:02:07] 2026-03-14 12:35:25,235 | INFO     | intersect: -294976258.62376124
[2026-03-15 00:02:07] 2026-03-14 12:35:25,358 | INFO     | chi2: 2.240064829316504
[2026-03-15 00:02:07] 2026-03-14 12:35:25,358 | INFO     | current chi2=2.240064829316504 (change=11.746702103113222 %)
[2026-03-15 00:02:07] 2026-03-14 12:35:25,359 | INFO     | left removable region: 30
[2026-03-15 00:02:07] 2026-03-14 12:35:25,368 | INFO     | sum of square deviations: 2040748652209.2788
[2026-03-15 00:02:07] 2026-03-14 12:35:25,400 | INFO     | monitor loop #4114: job 0:7043587904 is in state 'finished'
[2026-03-15 00:02:07] 2026-03-14 12:35:25,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 00:02:07] 2026-03-14 12:35:26,190 | INFO     | sum of deviations: 565647377214.5975
[2026-03-15 00:02:07] 2026-03-14 12:35:26,191 | INFO     | mean x: 1773433844.1237993
[2026-03-15 00:02:07] 2026-03-14 12:35:26,191 | INFO     | mean y: 2510541.876734258
[2026-03-15 00:02:07] 2026-03-14 12:35:26,191 | INFO     | intersect: -489043477.52994215
[2026-03-15 00:02:07] 2026-03-14 12:35:26,193 | INFO     | chi2: 0.03625590283354974
[2026-03-15 00:02:07] 2026-03-14 12:35:26,194 | INFO     | current memory leak: 0.28 B/s (using 1874 data points, chi2=0.04)
[2026-03-15 00:02:07] 2026-03-14 12:35:26,195 | INFO     | could have reported an average CPU frequency of 2900 MHz (68 samples)
[2026-03-15 00:02:07] 2026-03-14 12:35:26,196 | INFO     | ..............................
[2026-03-15 00:02:07] 2026-03-14 12:35:26,196 | INFO     | . Timing measurements:
[2026-03-15 00:02:07] 2026-03-14 12:35:26,196 | INFO     | . get job = 2 s
[2026-03-15 00:02:07] 2026-03-14 12:35:26,196 | INFO     | . initial setup = 81 s
[2026-03-15 00:02:07] 2026-03-14 12:35:26,196 | INFO     | . payload setup = 77 s
[2026-03-15 00:02:07] 2026-03-14 12:35:26,197 | INFO     | . stage-in = 1 s
[2026-03-15 00:02:07] 2026-03-14 12:35:26,197 | INFO     | . payload execution = 116860 s
[2026-03-15 00:02:07] 2026-03-14 12:35:26,197 | INFO     | . stage-out = 22 s
[2026-03-15 00:02:07] 2026-03-14 12:35:26,197 | INFO     | . log creation = 6 s
[2026-03-15 00:02:07] 2026-03-14 12:35:26,197 | INFO     | ..............................
[2026-03-15 00:02:07] 2026-03-14 12:35:28,693 | INFO     | 
[2026-03-15 00:02:07] 2026-03-14 12:35:28,693 | INFO     | job summary report
[2026-03-15 00:02:07] 2026-03-14 12:35:28,693 | INFO     | --------------------------------------------------
[2026-03-15 00:02:07] 2026-03-14 12:35:28,693 | INFO     | PanDA job id: 7043587904
[2026-03-15 00:02:07] 2026-03-14 12:35:28,694 | INFO     | task id: 48955006
[2026-03-15 00:02:07] 2026-03-14 12:35:28,694 | INFO     | errors: (none)
[2026-03-15 00:02:07] 2026-03-14 12:35:28,694 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 00:02:07] 2026-03-14 12:35:28,694 | INFO     | pilot state: finished 
[2026-03-15 00:02:07] 2026-03-14 12:35:28,694 | INFO     | transexitcode: 0
[2026-03-15 00:02:07] 2026-03-14 12:35:28,694 | INFO     | exeerrorcode: 0
[2026-03-15 00:02:07] 2026-03-14 12:35:28,694 | INFO     | exeerrordiag: 
[2026-03-15 00:02:07] 2026-03-14 12:35:28,695 | INFO     | exitcode: 0
[2026-03-15 00:02:07] 2026-03-14 12:35:28,695 | INFO     | exitmsg: OK
[2026-03-15 00:02:07] 2026-03-14 12:35:28,695 | INFO     | cpuconsumptiontime: 71468 s
[2026-03-15 00:02:07] 2026-03-14 12:35:28,695 | INFO     | nevents: 400
[2026-03-15 00:02:07] 2026-03-14 12:35:28,695 | INFO     | neventsw: 0
[2026-03-15 00:02:07] 2026-03-14 12:35:28,695 | INFO     | pid: 3577663
[2026-03-15 00:02:07] 2026-03-14 12:35:28,695 | INFO     | pgrp: 3577663
[2026-03-15 00:02:07] 2026-03-14 12:35:28,696 | INFO     | corecount: 8
[2026-03-15 00:02:07] 2026-03-14 12:35:28,696 | INFO     | event service: False
[2026-03-15 00:02:07] 2026-03-14 12:35:28,696 | INFO     | sizes: {0: 2279741, 2: 2279797, 5: 2279825, 8: 2279825, 10: 2280342, 12: 2280342, 116944: 2352632, 116950: 2352631, 116974: 2361685, 116976: 2361741, 116988: 23619
[2026-03-15 00:02:07] 2026-03-14 12:35:28,696 | INFO     | --------------------------------------------------
[2026-03-15 00:02:07] 2026-03-14 12:35:28,696 | INFO     | 
[2026-03-15 00:02:07] 2026-03-14 12:35:28,696 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-15 00:02:07] 2026-03-14 12:35:28,924 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,925 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,925 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,925 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,926 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,927 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,927 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,945 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 00:02:07] 2026-03-14 12:35:28,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,946 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 00:02:07] 2026-03-14 12:35:28,946 | INFO     | job 7043587904 has completed (purged errors)
[2026-03-15 00:02:07] 2026-03-14 12:35:28,946 | INFO     | overall cleanup function is called
[2026-03-15 00:02:07] 2026-03-14 12:35:30,015 | INFO     | --- collectZombieJob: --- 10, [3577663]
[2026-03-15 00:02:07] 2026-03-14 12:35:30,015 | INFO     | zombie collector waiting for pid 3577663
[2026-03-15 00:02:07] 2026-03-14 12:35:30,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 00:02:07] 2026-03-14 12:35:30,016 | INFO     | collected zombie processes
[2026-03-15 00:02:07] 2026-03-14 12:35:30,016 | INFO     | will attempt to kill all subprocesses of pid=3577663
[2026-03-15 00:02:07] 2026-03-14 12:35:34,016 | INFO     | PID=3540789 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 00:02:07] 2026-03-14 12:35:34,016 | INFO     | .. there are 44 such processes running
[2026-03-15 00:02:07] 2026-03-14 12:35:35,333 | INFO     | process IDs to be killed: [3577663] (in reverse order)
[2026-03-15 00:02:07] 2026-03-14 12:35:37,880 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 00:02:07] 2026-03-14 12:35:37,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 00:02:07] 2026-03-14 12:35:38,104 | INFO     | did not find any defunct processes belonging to 3577663
[2026-03-15 00:02:07] 2026-03-14 12:35:38,249 | INFO     | did not find any defunct processes belonging to 3577663
[2026-03-15 00:02:07] 2026-03-14 12:35:38,249 | INFO     | ready for new job
[2026-03-15 00:02:07] 2026-03-14 12:35:38,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 00:02:07] 2026-03-14 12:35:38,294 | INFO     | **************************************
[2026-03-15 00:02:07] 2026-03-14 12:35:38,295 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 00:02:07] 2026-03-14 12:35:38,295 | INFO     | **************************************
[2026-03-15 00:02:07] 2026-03-14 12:35:38,295 | INFO     | 
[2026-03-15 00:02:07] 2026-03-14 12:35:38,321 | INFO     | architecture information:
[2026-03-15 00:02:07] 2026-03-14 12:35:38,335 | INFO     | executing command: cat /etc/os-release
[2026-03-15 00:02:07] 2026-03-14 12:35:38,606 | INFO     | cat /etc/os-release:
[2026-03-15 00:02:07] NAME="CentOS Linux"
[2026-03-15 00:02:07] VERSION="7 (Core)"
[2026-03-15 00:02:07] ID="centos"
[2026-03-15 00:02:07] ID_LIKE="rhel fedora"
[2026-03-15 00:02:07] VERSION_ID="7"
[2026-03-15 00:02:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 00:02:07] ANSI_COLOR="0;31"
[2026-03-15 00:02:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 00:02:07] HOME_URL="https://www.centos.org/"
[2026-03-15 00:02:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 00:02:07] 
[2026-03-15 00:02:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 00:02:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 00:02:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 00:02:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 00:02:07] 
[2026-03-15 00:02:07] 2026-03-14 12:35:38,606 | INFO     | **************************************
[2026-03-15 00:02:07] 2026-03-14 12:35:39,109 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-15 00:02:07] 2026-03-14 12:35:39,272 | INFO     | sufficient remaining disk space (49596596224 B)
[2026-03-15 00:02:07] 2026-03-14 12:35:39,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 00:02:07] 2026-03-14 12:35:39,272 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 00:02:07] 2026-03-14 12:35:39,272 | INFO     | update_server=False
[2026-03-15 00:02:07] 2026-03-14 12:35:39,273 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 00:02:07] 2026-03-14 12:35:39,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 00:02:07] 2026-03-14 12:35:39,564 | INFO     | all data control threads have been joined
[2026-03-15 00:02:07] 2026-03-14 12:35:39,633 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 00:02:07] 2026-03-14 12:35:39,633 | INFO     | aborting loop
[2026-03-15 00:02:07] 2026-03-14 12:35:39,783 | INFO     | all payload control threads have been joined
[2026-03-15 00:02:07] 2026-03-14 12:35:40,254 | INFO     | all job control threads have been joined
[2026-03-15 00:02:07] 2026-03-14 12:35:40,278 | INFO     | [job] retrieve thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:40,449 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:40,568 | INFO     | [payload] failed_post thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:40,576 | INFO     | [data] control thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:40,654 | INFO     | [job] job monitor thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:40,805 | INFO     | [payload] control thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:41,277 | INFO     | [data] copytool_in thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:41,283 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:41,294 | INFO     | [data] copytool_out thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:41,295 | INFO     | [job] control thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:41,298 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:41,369 | INFO     | [payload] validate_post thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:41,701 | INFO     | [job] validate thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:41,766 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:42,006 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 00:02:07] 2026-03-14 12:35:42,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 00:02:07] 2026-03-14 12:35:43,019 | INFO     | [job] queue monitor thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:35:46,283 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 00:02:07] 2026-03-14 12:36:12,445 | INFO     | [monitor] cgroup control has ended
[2026-03-15 00:02:07] 2026-03-14 12:36:13,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148540237632)>', '<ExcThread(monitor, started 140148188632832)>']
[2026-03-15 00:02:07] 2026-03-14 12:36:15,293 | INFO     | PID=3540789 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 00:02:07] 2026-03-14 12:36:15,293 | INFO     | .. there are 44 such processes running
[2026-03-15 00:02:07] 2026-03-14 12:36:15,295 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 00:02:07] 2026-03-14 12:36:15,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 00:02:07] 2026-03-14 12:36:15,321 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 00:02:07] 2026-03-14 12:36:15,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 00:02:07] 2026-03-14 12:36:15,321 | INFO     | [monitor] control thread has ended
[2026-03-15 00:02:07] 2026-03-14 12:36:18,264 | INFO     | all workflow threads have been joined
[2026-03-15 00:02:07] 2026-03-14 12:36:18,264 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 00:02:07] 2026-03-14 12:36:18,284 | INFO     | traces error code: 0
[2026-03-15 00:02:07] 2026-03-14 12:36:18,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 00:02:07] 2026-03-14 12:36:21,979 [wrapper] ==== pilot stdout END ====
[2026-03-15 00:02:07] 2026-03-14 12:36:22,038 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 00:02:07] 2026-03-14 12:36:22,113 [wrapper] pilotpid: 3540789
[2026-03-15 00:02:07] 2026-03-14 12:36:22,178 [wrapper] Pilot exit status: 0
[2026-03-15 00:02:07] 2026-03-14 12:36:22,384 [wrapper] pandaids: 7043587904
[2026-03-15 00:02:07] 2026-03-14 12:36:23,679 [wrapper] cleanup supervisor_pilot 3300824 3540790
[2026-03-15 00:02:07] 2026-03-14 12:36:23,712 [wrapper] Test setup, not cleaning
[2026-03-15 00:02:07] 2026-03-14 12:36:23,817 [wrapper] apfmon messages muted
[2026-03-15 00:02:07] 2026-03-14 12:36:23,909 [wrapper] ==== wrapper stdout END ====
[2026-03-15 00:02:07] 2026-03-14 12:36:23,994 [wrapper] ==== wrapper stderr END ====
[2026-03-15 00:02:07]  *** Error codes and diagnostics ***
[2026-03-15 00:02:07]     "exeErrorCode": 0,
[2026-03-15 00:02:07]     "exeErrorDiag": "",
[2026-03-15 00:02:07]     "pilotErrorCode": 0,
[2026-03-15 00:02:07]     "pilotErrorDiag": "",
[2026-03-15 00:02:07]  *** Listing of results directory ***
[2026-03-15 00:02:07] total 635200
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 17:12 pilot3.tar.gz
[2026-03-15 00:02:07] -rwx------. 1 boincer umatlas     36322 Mar 12 17:14 runpilot2-wrapper.sh
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 17:15 queuedata.json
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas       100 Mar 13 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 00:02:07] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 13 00:02 run_atlas
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas       105 Mar 13 00:02 job.xml
[2026-03-15 00:02:07] -rw-r--r--. 2 boincer umatlas 438188697 Mar 13 00:02 EVNT.46701403._000959.pool.root.1
[2026-03-15 00:02:07] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 00:02 start_atlas.sh
[2026-03-15 00:02:07] drwxrwx--x. 2 boincer umatlas      4096 Mar 13 00:02 shared
[2026-03-15 00:02:07] -rw-r--r--. 2 boincer umatlas    597521 Mar 13 00:02 input.tar.gz
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas         0 Mar 13 00:02 boinc_lockfile
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas      2564 Mar 13 00:02 pandaJob.out
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas        57 Mar 13 00:02 setup.sh.local
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas       441 Mar 13 00:05 workernode_map.json
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas   1006514 Mar 13 00:05 agis_schedconf.cvmfs.json
[2026-03-15 00:02:07] drwx------. 5 boincer umatlas      4096 Mar 13 00:05 pilot3
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas 184773389 Mar 14 08:30 HITS.48955006._048430.pool.root.1
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas       530 Mar 14 08:31 boinc_task_state.xml
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas      1045 Mar 14 08:34 memory_monitor_summary.json
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas   1511579 Mar 14 08:34 agis_ddmendpoints.agis.ALL.json
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas   1430766 Mar 14 08:35 log.48955006._048430.job.log.tgz.1
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas      6397 Mar 14 08:35 heartbeat.json
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas        95 Mar 14 08:36 pilot_heartbeat.json
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas      4820 Mar 14 08:36 pilotlog.txt
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas  10339447 Mar 14 08:36 log.48955006._048430.job.log.1
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas       357 Mar 14 08:36 output.list
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas       620 Mar 14 08:36 runtime_log
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas  11786240 Mar 14 08:36 result.tar.gz
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas      9343 Mar 14 08:36 runtime_log.err
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas       660 Mar 14 08:36 nqXLDmtX2K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsrnLDmSnkdSo.diag
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas        27 Mar 15 00:02 wrapper_checkpoint.txt
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas      6526 Mar 15 00:02 init_data.xml
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas      8192 Mar 15 00:02 boinc_mmap_file
[2026-03-15 00:02:07] -rw-r--r--. 1 boincer umatlas     21482 Mar 15 00:02 stderr.txt
[2026-03-15 00:02:07] HITS file was successfully produced:
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas 184773389 Mar 14 08:30 shared/HITS.pool.root.1
[2026-03-15 00:02:07]  *** Contents of shared directory: ***
[2026-03-15 00:02:07] total 620484
[2026-03-15 00:02:07] -rw-r--r--. 2 boincer umatlas 438188697 Mar 13 00:02 ATLAS.root_0
[2026-03-15 00:02:07] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 00:02 start_atlas.sh
[2026-03-15 00:02:07] -rw-r--r--. 2 boincer umatlas    597521 Mar 13 00:02 input.tar.gz
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas 184773389 Mar 14 08:30 HITS.pool.root.1
[2026-03-15 00:02:07] -rw-------. 1 boincer umatlas  11786240 Mar 14 08:36 result.tar.gz
00:02:09 (3519585): run_atlas exited; CPU time 76915.593635
00:02:09 (3519585): called boinc_finish(0)

</stderr_txt>
]]>

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