Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:07 (2879062): wrapper (7.7.26015): starting
00:01:07 (2879062): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 00:01:08] Arguments: --nthreads 8
[2026-03-13 00:01:08] Threads: 8
[2026-03-13 00:01:08] Checking for CVMFS
[2026-03-13 00:01:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 00:01:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 00:01:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 00:01:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 00:01:12] 2.13.3.0 9702 183625 360280 157225 3 659 24684689 32935937 27541 16776704 0 768608295 99.678 625930654 32435 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-13 00:01:12] CVMFS is ok
[2026-03-13 00:01:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 00:01:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 00:01:12] Further information can be found at the LHC@home message board.
[2026-03-13 00:01:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 00:01:12] Checking for apptainer binary...
[2026-03-13 00:01:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 00:01:12] Running /usr/bin/apptainer --version
[2026-03-13 00:01:13] apptainer version 1.4.5-2.el9
[2026-03-13 00:01:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 00:01:16] c-4-37.aglt2.org
[2026-03-13 00:01:16] apptainer works
[2026-03-13 00:01:17] Set ATHENA_PROC_NUMBER=8
[2026-03-13 00:01:17] Set ATHENA_CORE_NUMBER=8
[2026-03-13 00:01:17] Starting ATLAS job with PandaID=7043587856
[2026-03-13 00:01:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 17:00:11]  *** The last 200 lines of the pilot log: ***
[2026-03-13 17:00:11] 2026-03-13 20:50:53,058 | INFO     | sum of square deviations: 299023722964.46545
[2026-03-13 17:00:11] 2026-03-13 20:50:53,211 | INFO     | PID=2891470 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 17:00:11] 2026-03-13 20:50:53,229 | INFO     | .. there are 36 such processes running
[2026-03-13 17:00:11] 2026-03-13 20:50:53,358 | INFO     | sum of deviations: 658508512401.1249
[2026-03-13 17:00:11] 2026-03-13 20:50:53,359 | INFO     | mean x: 1773404929.29251
[2026-03-13 17:00:11] 2026-03-13 20:50:53,359 | INFO     | mean y: 2458757.4493927127
[2026-03-13 17:00:11] 2026-03-13 20:50:53,359 | INFO     | intersect: -3902924502.0989103
[2026-03-13 17:00:11] 2026-03-13 20:50:53,361 | INFO     | chi2: 9.219154562970907
[2026-03-13 17:00:11] 2026-03-13 20:50:53,389 | INFO     | sum of square deviations: 294507154585.8878
[2026-03-13 17:00:11] 2026-03-13 20:50:53,606 | INFO     | sum of deviations: 921106682193.8418
[2026-03-13 17:00:11] 2026-03-13 20:50:53,606 | INFO     | mean x: 1773404776.805697
[2026-03-13 17:00:11] 2026-03-13 20:50:53,606 | INFO     | mean y: 2467613.3499491354
[2026-03-13 17:00:11] 2026-03-13 20:50:53,606 | INFO     | intersect: -5544069931.542957
[2026-03-13 17:00:11] 2026-03-13 20:50:53,608 | INFO     | chi2: 6.027545230530057
[2026-03-13 17:00:11] 2026-03-13 20:50:53,608 | INFO     | current chi2=6.027545230530057 (change=34.61932773380406 %)
[2026-03-13 17:00:11] 2026-03-13 20:50:53,662 | INFO     | sum of square deviations: 290036187589.73804
[2026-03-13 17:00:11] 2026-03-13 20:50:53,945 | INFO     | sum of deviations: 912743624531.8168
[2026-03-13 17:00:11] 2026-03-13 20:50:53,945 | INFO     | mean x: 1773404624.3169734
[2026-03-13 17:00:11] 2026-03-13 20:50:53,946 | INFO     | mean y: 2467328.1134969327
[2026-03-13 17:00:11] 2026-03-13 20:50:53,946 | INFO     | intersect: -5578435448.233127
[2026-03-13 17:00:11] 2026-03-13 20:50:53,947 | INFO     | chi2: 6.028121524588367
[2026-03-13 17:00:11] 2026-03-13 20:50:53,947 | INFO     | current chi2=6.028121524588367 (change=-0.009561007612035046 %)
[2026-03-13 17:00:11] 2026-03-13 20:50:53,947 | INFO     | right removable region: 977
[2026-03-13 17:00:11] 2026-03-13 20:50:53,953 | INFO     | sum of square deviations: 294505651794.49835
[2026-03-13 17:00:11] 2026-03-13 20:50:54,037 | INFO     | sum of deviations: 334377652936.104
[2026-03-13 17:00:11] 2026-03-13 20:50:54,037 | INFO     | mean x: 1773405081.8046796
[2026-03-13 17:00:11] 2026-03-13 20:50:54,037 | INFO     | mean y: 2469695.2817904376
[2026-03-13 17:00:11] 2026-03-13 20:50:54,037 | INFO     | intersect: -2011029962.010307
[2026-03-13 17:00:11] 2026-03-13 20:50:54,042 | INFO     | chi2: 5.282245383148
[2026-03-13 17:00:11] 2026-03-13 20:50:54,042 | INFO     | current chi2=5.282245383148 (change=42.70358147194598 %)
[2026-03-13 17:00:11] 2026-03-13 20:50:54,044 | INFO     | sum of square deviations: 290033782616.7445
[2026-03-13 17:00:11] 2026-03-13 20:50:54,233 | INFO     | sum of deviations: 125295227767.41278
[2026-03-13 17:00:11] 2026-03-13 20:50:54,233 | INFO     | mean x: 1773405234.3087935
[2026-03-13 17:00:11] 2026-03-13 20:50:54,234 | INFO     | mean y: 2476822.044989775
[2026-03-13 17:00:11] 2026-03-13 20:50:54,234 | INFO     | intersect: -763638113.7804691
[2026-03-13 17:00:11] 2026-03-13 20:50:54,235 | INFO     | chi2: 3.663679759961137
[2026-03-13 17:00:11] 2026-03-13 20:50:54,235 | INFO     | current chi2=3.663679759961137 (change=30.641621238395878 %)
[2026-03-13 17:00:11] 2026-03-13 20:50:54,269 | INFO     | time since job start (60389s) is within the limit (345600.0s)
[2026-03-13 17:00:11] 2026-03-13 20:50:54,269 | INFO     | sum of square deviations: 285607104124.8016
[2026-03-13 17:00:11] 2026-03-13 20:50:54,549 | INFO     | sum of deviations: 33971065174.807556
[2026-03-13 17:00:11] 2026-03-13 20:50:54,550 | INFO     | mean x: 1773405386.8180883
[2026-03-13 17:00:11] 2026-03-13 20:50:54,550 | INFO     | mean y: 2479967.8859198354
[2026-03-13 17:00:11] 2026-03-13 20:50:54,550 | INFO     | intersect: -208454806.1686747
[2026-03-13 17:00:11] 2026-03-13 20:50:54,551 | INFO     | chi2: 3.3745712528130225
[2026-03-13 17:00:11] 2026-03-13 20:50:54,551 | INFO     | current chi2=3.3745712528130225 (change=7.89120573003305 %)
[2026-03-13 17:00:11] 2026-03-13 20:50:54,552 | INFO     | left removable region: 30
[2026-03-13 17:00:11] 2026-03-13 20:50:54,602 | INFO     | sum of square deviations: 263315974765.42792
[2026-03-13 17:00:11] 2026-03-13 20:50:54,902 | INFO     | sum of deviations: 232309822428.47626
[2026-03-13 17:00:11] 2026-03-13 20:50:54,903 | INFO     | mean x: 1773405508.8637803
[2026-03-13 17:00:11] 2026-03-13 20:50:54,903 | INFO     | mean y: 2490899.1742344247
[2026-03-13 17:00:11] 2026-03-13 20:50:54,903 | INFO     | intersect: -1562091421.4572186
[2026-03-13 17:00:11] 2026-03-13 20:50:54,905 | INFO     | chi2: 0.010404104318008938
[2026-03-13 17:00:11] 2026-03-13 20:50:54,905 | INFO     | current memory leak: 0.88 B/s (using 947 data points, chi2=0.01)
[2026-03-13 17:00:11] 2026-03-13 20:50:54,940 | INFO     | could have reported an average CPU frequency of 2599 MHz (37 samples)
[2026-03-13 17:00:11] 2026-03-13 20:50:54,940 | INFO     | ..............................
[2026-03-13 17:00:11] 2026-03-13 20:50:54,940 | INFO     | . Timing measurements:
[2026-03-13 17:00:11] 2026-03-13 20:50:54,940 | INFO     | . get job = 2 s
[2026-03-13 17:00:11] 2026-03-13 20:50:54,941 | INFO     | . initial setup = 75 s
[2026-03-13 17:00:11] 2026-03-13 20:50:54,941 | INFO     | . payload setup = 83 s
[2026-03-13 17:00:11] 2026-03-13 20:50:54,941 | INFO     | . stage-in = 0 s
[2026-03-13 17:00:11] 2026-03-13 20:50:54,941 | INFO     | . payload execution = 60270 s
[2026-03-13 17:00:11] 2026-03-13 20:50:54,941 | INFO     | . stage-out = 10 s
[2026-03-13 17:00:11] 2026-03-13 20:50:54,941 | INFO     | . log creation = 1 s
[2026-03-13 17:00:11] 2026-03-13 20:50:54,941 | INFO     | ..............................
[2026-03-13 17:00:11] 2026-03-13 20:50:56,278 | INFO     | 
[2026-03-13 17:00:11] 2026-03-13 20:50:56,278 | INFO     | job summary report
[2026-03-13 17:00:11] 2026-03-13 20:50:56,278 | INFO     | --------------------------------------------------
[2026-03-13 17:00:11] 2026-03-13 20:50:56,278 | INFO     | PanDA job id: 7043587856
[2026-03-13 17:00:11] 2026-03-13 20:50:56,278 | INFO     | task id: 48955006
[2026-03-13 17:00:11] 2026-03-13 20:50:56,278 | INFO     | errors: (none)
[2026-03-13 17:00:11] 2026-03-13 20:50:56,279 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 17:00:11] 2026-03-13 20:50:56,279 | INFO     | pilot state: finished 
[2026-03-13 17:00:11] 2026-03-13 20:50:56,279 | INFO     | transexitcode: 0
[2026-03-13 17:00:11] 2026-03-13 20:50:56,279 | INFO     | exeerrorcode: 0
[2026-03-13 17:00:11] 2026-03-13 20:50:56,279 | INFO     | exeerrordiag: 
[2026-03-13 17:00:11] 2026-03-13 20:50:56,279 | INFO     | exitcode: 0
[2026-03-13 17:00:11] 2026-03-13 20:50:56,279 | INFO     | exitmsg: OK
[2026-03-13 17:00:11] 2026-03-13 20:50:56,279 | INFO     | cpuconsumptiontime: 47980 s
[2026-03-13 17:00:11] 2026-03-13 20:50:56,279 | INFO     | nevents: 400
[2026-03-13 17:00:11] 2026-03-13 20:50:56,303 | INFO     | neventsw: 0
[2026-03-13 17:00:11] 2026-03-13 20:50:56,303 | INFO     | pid: 2917056
[2026-03-13 17:00:11] 2026-03-13 20:50:56,303 | INFO     | pgrp: 2917056
[2026-03-13 17:00:11] 2026-03-13 20:50:56,303 | INFO     | corecount: 8
[2026-03-13 17:00:11] 2026-03-13 20:50:56,303 | INFO     | event service: False
[2026-03-13 17:00:11] 2026-03-13 20:50:56,303 | INFO     | sizes: {0: 2279140, 1: 2279741, 2: 2279825, 5: 2279853, 6: 2279853, 7: 2280498, 9: 2280498, 60360: 2330541, 60373: 2339539, 60375: 2339595, 60380: 2339789}
[2026-03-13 17:00:11] 2026-03-13 20:50:56,304 | INFO     | --------------------------------------------------
[2026-03-13 17:00:11] 2026-03-13 20:50:56,304 | INFO     | 
[2026-03-13 17:00:11] 2026-03-13 20:50:56,304 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-13 17:00:11] 2026-03-13 20:50:56,356 | INFO     | time since job start (60391s) is within the limit (345600.0s)
[2026-03-13 17:00:11] 2026-03-13 20:50:56,604 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,604 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,604 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,604 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,605 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,605 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,605 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,605 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,605 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,605 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,606 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 17:00:11] 2026-03-13 20:50:56,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,606 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 17:00:11] 2026-03-13 20:50:56,607 | INFO     | job 7043587856 has completed (purged errors)
[2026-03-13 17:00:11] 2026-03-13 20:50:56,607 | INFO     | overall cleanup function is called
[2026-03-13 17:00:11] 2026-03-13 20:50:57,644 | INFO     | --- collectZombieJob: --- 10, [2917056]
[2026-03-13 17:00:11] 2026-03-13 20:50:57,644 | INFO     | zombie collector waiting for pid 2917056
[2026-03-13 17:00:11] 2026-03-13 20:50:57,644 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 17:00:11] 2026-03-13 20:50:57,644 | INFO     | collected zombie processes
[2026-03-13 17:00:11] 2026-03-13 20:50:57,644 | INFO     | will attempt to kill all subprocesses of pid=2917056
[2026-03-13 17:00:11] 2026-03-13 20:51:01,045 | INFO     | process IDs to be killed: [2917056] (in reverse order)
[2026-03-13 17:00:11] 2026-03-13 20:51:01,473 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 17:00:11] 2026-03-13 20:51:01,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 17:00:11] 2026-03-13 20:51:01,491 | INFO     | did not find any defunct processes belonging to 2917056
[2026-03-13 17:00:11] 2026-03-13 20:51:01,509 | INFO     | did not find any defunct processes belonging to 2917056
[2026-03-13 17:00:11] 2026-03-13 20:51:01,509 | INFO     | ready for new job
[2026-03-13 17:00:11] 2026-03-13 20:51:01,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 17:00:11] 2026-03-13 20:51:01,514 | INFO     | **************************************
[2026-03-13 17:00:11] 2026-03-13 20:51:01,569 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 17:00:11] 2026-03-13 20:51:01,569 | INFO     | **************************************
[2026-03-13 17:00:11] 2026-03-13 20:51:01,569 | INFO     | 
[2026-03-13 17:00:11] 2026-03-13 20:51:01,571 | INFO     | architecture information:
[2026-03-13 17:00:11] 2026-03-13 20:51:01,572 | INFO     | executing command: cat /etc/os-release
[2026-03-13 17:00:11] 2026-03-13 20:51:01,680 | INFO     | cat /etc/os-release:
[2026-03-13 17:00:11] NAME="CentOS Linux"
[2026-03-13 17:00:11] VERSION="7 (Core)"
[2026-03-13 17:00:11] ID="centos"
[2026-03-13 17:00:11] ID_LIKE="rhel fedora"
[2026-03-13 17:00:11] VERSION_ID="7"
[2026-03-13 17:00:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 17:00:11] ANSI_COLOR="0;31"
[2026-03-13 17:00:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 17:00:11] HOME_URL="https://www.centos.org/"
[2026-03-13 17:00:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 17:00:11] 
[2026-03-13 17:00:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 17:00:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 17:00:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 17:00:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 17:00:11] 
[2026-03-13 17:00:11] 2026-03-13 20:51:01,680 | INFO     | **************************************
[2026-03-13 17:00:11] 2026-03-13 20:51:02,195 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-13 17:00:11] 2026-03-13 20:51:02,358 | INFO     | sufficient remaining disk space (73891053568 B)
[2026-03-13 17:00:11] 2026-03-13 20:51:02,359 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 17:00:11] 2026-03-13 20:51:02,359 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 17:00:11] 2026-03-13 20:51:02,359 | INFO     | update_server=False
[2026-03-13 17:00:11] 2026-03-13 20:51:02,359 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 17:00:11] 2026-03-13 20:51:02,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 17:00:11] 2026-03-13 20:51:02,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 17:00:11] 2026-03-13 20:51:02,393 | INFO     | aborting loop
[2026-03-13 17:00:11] 2026-03-13 20:51:02,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 17:00:11] 2026-03-13 20:51:02,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 17:00:11] 2026-03-13 20:51:03,204 | INFO     | all payload control threads have been joined
[2026-03-13 17:00:11] 2026-03-13 20:51:03,365 | INFO     | [job] retrieve thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:03,366 | INFO     | [job] queue monitor thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:03,384 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:03,399 | INFO     | [job] job monitor thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:03,457 | INFO     | all data control threads have been joined
[2026-03-13 17:00:11] 2026-03-13 20:51:03,789 | INFO     | [payload] failed_post thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:03,808 | INFO     | all job control threads have been joined
[2026-03-13 17:00:11] 2026-03-13 20:51:04,151 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:04,203 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:04,210 | INFO     | [payload] control thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:04,464 | INFO     | [data] control thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:04,617 | INFO     | [data] copytool_out thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:04,646 | INFO     | [payload] validate_post thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:04,705 | INFO     | [job] validate thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:04,706 | INFO     | [data] copytool_in thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:04,707 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:04,814 | INFO     | [job] control thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:06,404 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 17:00:11] 2026-03-13 20:51:33,492 | INFO     | PID=2891470 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 17:00:11] 2026-03-13 20:51:33,492 | INFO     | .. there are 36 such processes running
[2026-03-13 17:00:11] 2026-03-13 20:51:33,493 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 17:00:11] 2026-03-13 20:51:33,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 17:00:11] 2026-03-13 20:51:33,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 17:00:11] 2026-03-13 20:51:38,029 | INFO     | [monitor] cgroup control has ended
[2026-03-13 17:00:11] 2026-03-13 20:51:39,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234250291008)>', '<ExcThread(monitor, started 140233744041728)>']
[2026-03-13 17:00:11] 2026-03-13 20:51:40,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 17:00:11] 2026-03-13 20:51:40,587 | INFO     | [monitor] control thread has ended
[2026-03-13 17:00:11] 2026-03-13 20:51:45,007 | INFO     | all workflow threads have been joined
[2026-03-13 17:00:11] 2026-03-13 20:51:45,007 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 17:00:11] 2026-03-13 20:51:45,007 | INFO     | traces error code: 0
[2026-03-13 17:00:11] 2026-03-13 20:51:45,008 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 17:00:11] 2026-03-13 20:51:45,846 [wrapper] ==== pilot stdout END ====
[2026-03-13 17:00:11] 2026-03-13 20:51:45,865 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 17:00:11] 2026-03-13 20:51:45,885 [wrapper] pilotpid: 2891470
[2026-03-13 17:00:11] 2026-03-13 20:51:45,920 [wrapper] Pilot exit status: 0
[2026-03-13 17:00:11] 2026-03-13 20:51:46,096 [wrapper] pandaids: 7043587856
[2026-03-13 17:00:11] 2026-03-13 20:51:47,012 [wrapper] cleanup supervisor_pilot 1726303 2891471
[2026-03-13 17:00:11] 2026-03-13 20:51:47,045 [wrapper] Test setup, not cleaning
[2026-03-13 17:00:11] 2026-03-13 20:51:47,071 [wrapper] apfmon messages muted
[2026-03-13 17:00:11] 2026-03-13 20:51:47,115 [wrapper] ==== wrapper stdout END ====
[2026-03-13 17:00:11] 2026-03-13 20:51:47,158 [wrapper] ==== wrapper stderr END ====
[2026-03-13 17:00:11]  *** Error codes and diagnostics ***
[2026-03-13 17:00:11]     "exeErrorCode": 0,
[2026-03-13 17:00:11]     "exeErrorDiag": "",
[2026-03-13 17:00:11]     "pilotErrorCode": 0,
[2026-03-13 17:00:11]     "pilotErrorDiag": "",
[2026-03-13 17:00:11]  *** Listing of results directory ***
[2026-03-13 17:00:11] total 627244
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 17:12 pilot3.tar.gz
[2026-03-13 17:00:11] -rwx------. 1 boincer umatlas     36322 Mar 12 17:14 runpilot2-wrapper.sh
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 17:15 queuedata.json
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas       100 Mar 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 17:00:11] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 13 00:01 run_atlas
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas       105 Mar 13 00:01 job.xml
[2026-03-13 17:00:11] -rw-r--r--. 2 boincer umatlas 438803635 Mar 13 00:01 EVNT.46701403._000958.pool.root.1
[2026-03-13 17:00:11] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 00:01 start_atlas.sh
[2026-03-13 17:00:11] drwxrwx--x. 2 boincer umatlas      4096 Mar 13 00:01 shared
[2026-03-13 17:00:11] -rw-r--r--. 2 boincer umatlas    597526 Mar 13 00:01 input.tar.gz
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas         0 Mar 13 00:01 boinc_lockfile
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas      2564 Mar 13 00:01 pandaJob.out
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas        57 Mar 13 00:01 setup.sh.local
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas       440 Mar 13 00:04 workernode_map.json
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas   1006514 Mar 13 00:04 agis_schedconf.cvmfs.json
[2026-03-13 17:00:11] drwx------. 5 boincer umatlas      4096 Mar 13 00:04 pilot3
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas 185401130 Mar 13 16:47 HITS.48955006._048382.pool.root.1
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas       532 Mar 13 16:47 boinc_task_state.xml
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas      1041 Mar 13 16:50 memory_monitor_summary.json
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas   1511579 Mar 13 16:50 agis_ddmendpoints.agis.ALL.json
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas    935009 Mar 13 16:50 log.48955006._048382.job.log.tgz.1
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas      6391 Mar 13 16:50 heartbeat.json
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas        95 Mar 13 16:51 pilot_heartbeat.json
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas      4820 Mar 13 16:51 pilotlog.txt
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas   6138596 Mar 13 16:51 log.48955006._048382.job.log.1
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas       357 Mar 13 16:51 output.list
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas       620 Mar 13 16:51 runtime_log
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas   7096320 Mar 13 16:51 result.tar.gz
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas      9332 Mar 13 16:51 runtime_log.err
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas       656 Mar 13 16:51 f2qLDmmX2K9n9Rq4apOajLDm4fhM0noT9bVooX4SDm3NlLDmeWEeDn.diag
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas      6659 Mar 13 16:56 init_data.xml
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas        28 Mar 13 17:00 wrapper_checkpoint.txt
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas      8192 Mar 13 17:00 boinc_mmap_file
[2026-03-13 17:00:11] -rw-r--r--. 1 boincer umatlas     21207 Mar 13 17:00 stderr.txt
[2026-03-13 17:00:11] HITS file was successfully produced:
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas 185401130 Mar 13 16:47 shared/HITS.pool.root.1
[2026-03-13 17:00:11]  *** Contents of shared directory: ***
[2026-03-13 17:00:11] total 617116
[2026-03-13 17:00:11] -rw-r--r--. 2 boincer umatlas 438803635 Mar 13 00:01 ATLAS.root_0
[2026-03-13 17:00:11] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 00:01 start_atlas.sh
[2026-03-13 17:00:11] -rw-r--r--. 2 boincer umatlas    597526 Mar 13 00:01 input.tar.gz
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas 185401130 Mar 13 16:47 HITS.pool.root.1
[2026-03-13 17:00:11] -rw-------. 1 boincer umatlas   7096320 Mar 13 16:51 result.tar.gz
17:00:13 (2879062): run_atlas exited; CPU time 50248.078081
17:00:13 (2879062): called boinc_finish(0)

</stderr_txt>
]]>

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