Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:04:55 (1493): wrapper (7.7.26015): starting
14:04:55 (1493): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 14:04:55] Arguments: --nthreads 8
[2026-03-13 14:04:55] Threads: 8
[2026-03-13 14:04:55] Checking for CVMFS
[2026-03-13 14:04:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 14:04:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 14:04:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 14:05:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 14:05:00] 2.11.2.0 25223 24332 105852 157240 1 53 20790162 25165824 4834 130560 152 6984845 99.835 3326948 158 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 14:05:00] CVMFS is ok
[2026-03-13 14:05:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 14:05:00] Checking for apptainer binary...
[2026-03-13 14:05:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 14:05:00] Running /usr/bin/apptainer --version
[2026-03-13 14:05:01] apptainer version 1.3.2-1.el7
[2026-03-13 14:05:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 14:05:10] cg-vwn444.simple-grid.lan
[2026-03-13 14:05:10] apptainer works
[2026-03-13 14:05:10] Set ATHENA_PROC_NUMBER=8
[2026-03-13 14:05:10] Set ATHENA_CORE_NUMBER=8
[2026-03-13 14:05:10] Starting ATLAS job with PandaID=7043633744
[2026-03-13 14:05:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 17:56:51]  *** The last 200 lines of the pilot log: ***
[2026-03-13 17:56:51] 2026-03-13 16:56:04,793 | INFO     | log transfer has been attempted: DONE
[2026-03-13 17:56:51] 2026-03-13 16:56:04,793 | INFO     | job 7043633744 has finished - writing final server update
[2026-03-13 17:56:51] 2026-03-13 16:56:04,793 | INFO     | total number of processed events: 400 (read)
[2026-03-13 17:56:51] 2026-03-13 16:56:04,795 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7043633744/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 17:56:51] 2026-03-13 16:56:04,796 | INFO     | extracted standard info from prmon json
[2026-03-13 17:56:51] 2026-03-13 16:56:04,796 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 17:56:51] 2026-03-13 16:56:04,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 17:56:51] 2026-03-13 16:56:04,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 17:56:51] 2026-03-13 16:56:04,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 17:56:51] 2026-03-13 16:56:04,802 | INFO     | fitting pss+swap vs Time
[2026-03-13 17:56:51] 2026-03-13 16:56:04,803 | INFO     | sum of square deviations: 3212467674.5
[2026-03-13 17:56:51] 2026-03-13 16:56:04,805 | INFO     | sum of deviations: 30693793156.999992
[2026-03-13 17:56:51] 2026-03-13 16:56:04,805 | INFO     | mean x: 1773414300.5
[2026-03-13 17:56:51] 2026-03-13 16:56:04,805 | INFO     | mean y: 2481831.3211009176
[2026-03-13 17:56:51] 2026-03-13 16:56:04,805 | INFO     | intersect: -16941754574.010183
[2026-03-13 17:56:51] 2026-03-13 16:56:04,806 | INFO     | chi2: 6.404808275326534
[2026-03-13 17:56:51] 2026-03-13 16:56:04,806 | INFO     | sum of square deviations: 2996454322.0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,808 | INFO     | sum of deviations: 44669428737.0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,809 | INFO     | mean x: 1773414148.0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,809 | INFO     | mean y: 2491508.3004694837
[2026-03-13 17:56:51] 2026-03-13 16:56:04,809 | INFO     | intersect: -26434553209.404247
[2026-03-13 17:56:51] 2026-03-13 16:56:04,809 | INFO     | chi2: 5.697255441879968
[2026-03-13 17:56:51] 2026-03-13 16:56:04,810 | INFO     | current chi2=5.697255441879968 (change=11.047213328341087 %)
[2026-03-13 17:56:51] 2026-03-13 16:56:04,810 | INFO     | right removable region: 212
[2026-03-13 17:56:51] 2026-03-13 16:56:04,810 | INFO     | sum of square deviations: 2996454322.0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,812 | INFO     | sum of deviations: -44148434203.00001
[2026-03-13 17:56:51] 2026-03-13 16:56:04,812 | INFO     | mean x: 1773414453.0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,812 | INFO     | mean y: 2534610.4741784036
[2026-03-13 17:56:51] 2026-03-13 16:56:04,813 | INFO     | intersect: 26131239699.715233
[2026-03-13 17:56:51] 2026-03-13 16:56:04,813 | INFO     | chi2: 1.792699327555868
[2026-03-13 17:56:51] 2026-03-13 16:56:04,813 | INFO     | current chi2=1.792699327555868 (change=72.01010162221489 %)
[2026-03-13 17:56:51] 2026-03-13 16:56:04,814 | INFO     | sum of square deviations: 2790348132.0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,816 | INFO     | sum of deviations: -69375234028.50002
[2026-03-13 17:56:51] 2026-03-13 16:56:04,816 | INFO     | mean x: 1773414605.5
[2026-03-13 17:56:51] 2026-03-13 16:56:04,816 | INFO     | mean y: 2553105.6490384615
[2026-03-13 17:56:51] 2026-03-13 16:56:04,816 | INFO     | intersect: 44094203131.38946
[2026-03-13 17:56:51] 2026-03-13 16:56:04,817 | INFO     | chi2: 0.9963135201242124
[2026-03-13 17:56:51] 2026-03-13 16:56:04,817 | INFO     | current chi2=0.9963135201242124 (change=44.4238358987635 %)
[2026-03-13 17:56:51] 2026-03-13 16:56:04,817 | INFO     | sum of square deviations: 2593916542.0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,819 | INFO     | sum of deviations: -66310958046.0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,819 | INFO     | mean x: 1773414758.0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,819 | INFO     | mean y: 2550696.1379310344
[2026-03-13 17:56:51] 2026-03-13 16:56:04,820 | INFO     | intersect: 45338177232.9979
[2026-03-13 17:56:51] 2026-03-13 16:56:04,820 | INFO     | chi2: 0.98628199882492
[2026-03-13 17:56:51] 2026-03-13 16:56:04,820 | INFO     | current chi2=0.98628199882492 (change=1.0068639134839565 %)
[2026-03-13 17:56:51] 2026-03-13 16:56:04,820 | INFO     | left removable region: 30
[2026-03-13 17:56:51] 2026-03-13 16:56:04,821 | INFO     | sum of square deviations: 1869302025.5
[2026-03-13 17:56:51] 2026-03-13 16:56:04,822 | INFO     | sum of deviations: -33213297598.500004
[2026-03-13 17:56:51] 2026-03-13 16:56:04,822 | INFO     | mean x: 1773415032.5
[2026-03-13 17:56:51] 2026-03-13 16:56:04,822 | INFO     | mean y: 2546937.0604395606
[2026-03-13 17:56:51] 2026-03-13 16:56:04,823 | INFO     | intersect: 31512148080.471844
[2026-03-13 17:56:51] 2026-03-13 16:56:04,823 | INFO     | chi2: 0.17672372887211946
[2026-03-13 17:56:51] 2026-03-13 16:56:04,823 | INFO     | current memory leak: -17.77 B/s (using 182 data points, chi2=0.18)
[2026-03-13 17:56:51] 2026-03-13 16:56:04,824 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-13 17:56:51] 2026-03-13 16:56:04,824 | INFO     | ..............................
[2026-03-13 17:56:51] 2026-03-13 16:56:04,824 | INFO     | . Timing measurements:
[2026-03-13 17:56:51] 2026-03-13 16:56:04,824 | INFO     | . get job = 0 s
[2026-03-13 17:56:51] 2026-03-13 16:56:04,825 | INFO     | . initial setup = 106 s
[2026-03-13 17:56:51] 2026-03-13 16:56:04,825 | INFO     | . payload setup = 133 s
[2026-03-13 17:56:51] 2026-03-13 16:56:04,825 | INFO     | . stage-in = 0 s
[2026-03-13 17:56:51] 2026-03-13 16:56:04,825 | INFO     | . payload execution = 13390 s
[2026-03-13 17:56:51] 2026-03-13 16:56:04,825 | INFO     | . stage-out = 3 s
[2026-03-13 17:56:51] 2026-03-13 16:56:04,825 | INFO     | . log creation = 1 s
[2026-03-13 17:56:51] 2026-03-13 16:56:04,825 | INFO     | ..............................
[2026-03-13 17:56:51] 2026-03-13 16:56:04,946 | INFO     | 
[2026-03-13 17:56:51] 2026-03-13 16:56:04,946 | INFO     | job summary report
[2026-03-13 17:56:51] 2026-03-13 16:56:04,946 | INFO     | --------------------------------------------------
[2026-03-13 17:56:51] 2026-03-13 16:56:04,946 | INFO     | PanDA job id: 7043633744
[2026-03-13 17:56:51] 2026-03-13 16:56:04,946 | INFO     | task id: 48955006
[2026-03-13 17:56:51] 2026-03-13 16:56:04,946 | INFO     | errors: (none)
[2026-03-13 17:56:51] 2026-03-13 16:56:04,947 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 17:56:51] 2026-03-13 16:56:04,947 | INFO     | pilot state: finished 
[2026-03-13 17:56:51] 2026-03-13 16:56:04,947 | INFO     | transexitcode: 0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,947 | INFO     | exeerrorcode: 0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,947 | INFO     | exeerrordiag: 
[2026-03-13 17:56:51] 2026-03-13 16:56:04,947 | INFO     | exitcode: 0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,947 | INFO     | exitmsg: OK
[2026-03-13 17:56:51] 2026-03-13 16:56:04,947 | INFO     | cpuconsumptiontime: 51544 s
[2026-03-13 17:56:51] 2026-03-13 16:56:04,947 | INFO     | nevents: 400
[2026-03-13 17:56:51] 2026-03-13 16:56:04,947 | INFO     | neventsw: 0
[2026-03-13 17:56:51] 2026-03-13 16:56:04,948 | INFO     | pid: 10144
[2026-03-13 17:56:51] 2026-03-13 16:56:04,948 | INFO     | pgrp: 10144
[2026-03-13 17:56:51] 2026-03-13 16:56:04,948 | INFO     | corecount: 8
[2026-03-13 17:56:51] 2026-03-13 16:56:04,948 | INFO     | event service: False
[2026-03-13 17:56:51] 2026-03-13 16:56:04,948 | INFO     | sizes: {0: 2279797, 1: 2280258, 12: 2280258, 13528: 2310475, 13532: 2319667}
[2026-03-13 17:56:51] 2026-03-13 16:56:04,948 | INFO     | --------------------------------------------------
[2026-03-13 17:56:51] 2026-03-13 16:56:04,948 | INFO     | 
[2026-03-13 17:56:51] 2026-03-13 16:56:04,948 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-13 17:56:51] 2026-03-13 16:56:05,359 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,360 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,360 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,360 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,361 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,361 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,361 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,361 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,361 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,361 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,361 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,361 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 17:56:51] 2026-03-13 16:56:05,362 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,362 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 17:56:51] 2026-03-13 16:56:05,362 | INFO     | job 7043633744 has completed (purged errors)
[2026-03-13 17:56:51] 2026-03-13 16:56:05,362 | INFO     | overall cleanup function is called
[2026-03-13 17:56:51] 2026-03-13 16:56:06,371 | INFO     | --- collectZombieJob: --- 10, [10144]
[2026-03-13 17:56:51] 2026-03-13 16:56:06,371 | INFO     | zombie collector waiting for pid 10144
[2026-03-13 17:56:51] 2026-03-13 16:56:06,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 17:56:51] 2026-03-13 16:56:06,371 | INFO     | collected zombie processes
[2026-03-13 17:56:51] 2026-03-13 16:56:06,371 | INFO     | will attempt to kill all subprocesses of pid=10144
[2026-03-13 17:56:51] 2026-03-13 16:56:06,473 | INFO     | process IDs to be killed: [10144] (in reverse order)
[2026-03-13 17:56:51] 2026-03-13 16:56:07,318 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 17:56:51] 2026-03-13 16:56:07,318 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 17:56:51] 2026-03-13 16:56:07,322 | INFO     | did not find any defunct processes belonging to 10144
[2026-03-13 17:56:51] 2026-03-13 16:56:07,325 | INFO     | did not find any defunct processes belonging to 10144
[2026-03-13 17:56:51] 2026-03-13 16:56:07,325 | INFO     | ready for new job
[2026-03-13 17:56:51] 2026-03-13 16:56:07,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 17:56:51] 2026-03-13 16:56:07,330 | INFO     | **************************************
[2026-03-13 17:56:51] 2026-03-13 16:56:07,331 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 17:56:51] 2026-03-13 16:56:07,331 | INFO     | **************************************
[2026-03-13 17:56:51] 2026-03-13 16:56:07,331 | INFO     | 
[2026-03-13 17:56:51] 2026-03-13 16:56:07,332 | INFO     | pilot is running in a VM
[2026-03-13 17:56:51] 2026-03-13 16:56:07,332 | INFO     | architecture information:
[2026-03-13 17:56:51] 2026-03-13 16:56:07,343 | INFO     | executing command: cat /etc/os-release
[2026-03-13 17:56:51] 2026-03-13 16:56:07,662 | INFO     | cat /etc/os-release:
[2026-03-13 17:56:51] NAME="CentOS Linux"
[2026-03-13 17:56:51] VERSION="7 (Core)"
[2026-03-13 17:56:51] ID="centos"
[2026-03-13 17:56:51] ID_LIKE="rhel fedora"
[2026-03-13 17:56:51] VERSION_ID="7"
[2026-03-13 17:56:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 17:56:51] ANSI_COLOR="0;31"
[2026-03-13 17:56:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 17:56:51] HOME_URL="https://www.centos.org/"
[2026-03-13 17:56:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 17:56:51] 
[2026-03-13 17:56:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 17:56:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 17:56:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 17:56:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 17:56:51] 
[2026-03-13 17:56:51] 2026-03-13 16:56:07,662 | INFO     | **************************************
[2026-03-13 17:56:51] 2026-03-13 16:56:08,166 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-13 17:56:51] 2026-03-13 16:56:08,438 | INFO     | sufficient remaining disk space (494853423104 B)
[2026-03-13 17:56:51] 2026-03-13 16:56:08,439 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 17:56:51] 2026-03-13 16:56:08,439 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 17:56:51] 2026-03-13 16:56:08,439 | INFO     | update_server=False
[2026-03-13 17:56:51] 2026-03-13 16:56:08,439 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 17:56:51] 2026-03-13 16:56:08,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 17:56:51] 2026-03-13 16:56:08,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 17:56:51] 2026-03-13 16:56:08,589 | INFO     | aborting loop
[2026-03-13 17:56:51] 2026-03-13 16:56:08,927 | INFO     | all payload control threads have been joined
[2026-03-13 17:56:51] 2026-03-13 16:56:08,953 | INFO     | all job control threads have been joined
[2026-03-13 17:56:51] 2026-03-13 16:56:08,991 | INFO     | all data control threads have been joined
[2026-03-13 17:56:51] 2026-03-13 16:56:09,445 | INFO     | [job] retrieve thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:09,453 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:09,587 | INFO     | [payload] failed_post thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:09,595 | INFO     | [job] job monitor thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:09,624 | INFO     | [data] copytool_in thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:09,933 | INFO     | [payload] control thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:09,959 | INFO     | [job] control thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:09,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 17:56:51] 2026-03-13 16:56:09,997 | INFO     | [data] control thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:10,010 | INFO     | [payload] validate_post thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:10,084 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:10,205 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:10,452 | INFO     | [data] copytool_out thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:10,628 | INFO     | [job] validate thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:10,790 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:10,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 17:56:51] 2026-03-13 16:56:10,970 | INFO     | [job] queue monitor thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:14,811 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 17:56:51] 2026-03-13 16:56:37,008 | INFO     | PID=5606 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 17:56:51] 2026-03-13 16:56:37,009 | INFO     | .. there are 9 such processes running
[2026-03-13 17:56:51] 2026-03-13 16:56:37,009 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 17:56:51] 2026-03-13 16:56:37,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 17:56:51] 2026-03-13 16:56:37,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 17:56:51] 2026-03-13 16:56:42,818 | INFO     | [monitor] cgroup control has ended
[2026-03-13 17:56:51] 2026-03-13 16:56:42,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804949710656)>', '<ExcThread(monitor, started 139803995662080)>']
[2026-03-13 17:56:51] 2026-03-13 16:56:43,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 17:56:51] 2026-03-13 16:56:43,045 | INFO     | [monitor] control thread has ended
[2026-03-13 17:56:51] 2026-03-13 16:56:47,890 | INFO     | all workflow threads have been joined
[2026-03-13 17:56:51] 2026-03-13 16:56:47,890 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 17:56:51] 2026-03-13 16:56:47,890 | INFO     | traces error code: 0
[2026-03-13 17:56:51] 2026-03-13 16:56:47,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 17:56:51] 2026-03-13 16:56:48,208 [wrapper] ==== pilot stdout END ====
[2026-03-13 17:56:51] 2026-03-13 16:56:48,270 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 17:56:51] 2026-03-13 16:56:48,327 [wrapper] pilotpid: 5606
[2026-03-13 17:56:51] 2026-03-13 16:56:48,373 [wrapper] Pilot exit status: 0
[2026-03-13 17:56:51] 2026-03-13 16:56:48,797 [wrapper] pandaids: 7043633744
[2026-03-13 17:56:51] 2026-03-13 16:56:49,668 [wrapper] cleanup supervisor_pilot 17848 5607
[2026-03-13 17:56:51] 2026-03-13 16:56:49,753 [wrapper] Test setup, not cleaning
[2026-03-13 17:56:51] 2026-03-13 16:56:49,861 [wrapper] apfmon messages muted
[2026-03-13 17:56:51] 2026-03-13 16:56:49,929 [wrapper] ==== wrapper stdout END ====
[2026-03-13 17:56:51] 2026-03-13 16:56:49,957 [wrapper] ==== wrapper stderr END ====
[2026-03-13 17:56:51]  *** Error codes and diagnostics ***
[2026-03-13 17:56:51]     "exeErrorCode": 0,
[2026-03-13 17:56:51]     "exeErrorDiag": "",
[2026-03-13 17:56:51]     "pilotErrorCode": 0,
[2026-03-13 17:56:51]     "pilotErrorDiag": "",
[2026-03-13 17:56:51]  *** Listing of results directory ***
[2026-03-13 17:56:51] total 625408
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc    585013 Mar 12 23:18 pilot3.tar.gz
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc      5111 Mar 12 23:19 queuedata.json
[2026-03-13 17:56:51] -rwx------. 1 boinc boinc     36322 Mar 12 23:20 runpilot2-wrapper.sh
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc       100 Mar 13 14:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 17:56:51] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 14:04 run_atlas
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc       105 Mar 13 14:04 job.xml
[2026-03-13 17:56:51] -rw-r--r--. 2 boinc boinc 444545936 Mar 13 14:04 EVNT.46701403._000966.pool.root.1
[2026-03-13 17:56:51] drwxrwx--x. 2 boinc boinc        68 Mar 13 14:04 shared
[2026-03-13 17:56:51] -rw-r--r--. 2 boinc boinc    597528 Mar 13 14:04 input.tar.gz
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc      6391 Mar 13 14:04 init_data.xml
[2026-03-13 17:56:51] -rw-r--r--. 2 boinc boinc     15845 Mar 13 14:04 start_atlas.sh
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc         0 Mar 13 14:04 boinc_lockfile
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc      2564 Mar 13 14:05 pandaJob.out
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc       415 Mar 13 14:10 workernode_map.json
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc   1006473 Mar 13 14:10 agis_schedconf.cvmfs.json
[2026-03-13 17:56:51] drwx------. 5 boinc boinc      4096 Mar 13 14:10 pilot3
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc 187291138 Mar 13 17:54 HITS.48955006._048784.pool.root.1
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc       532 Mar 13 17:54 boinc_task_state.xml
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc        95 Mar 13 17:55 pilot_heartbeat.json
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc      1013 Mar 13 17:55 memory_monitor_summary.json
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc   1511579 Mar 13 17:56 agis_ddmendpoints.agis.ALL.json
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc    443473 Mar 13 17:56 log.48955006._048784.job.log.tgz.1
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc      6327 Mar 13 17:56 heartbeat.json
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc        28 Mar 13 17:56 wrapper_checkpoint.txt
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc      8192 Mar 13 17:56 boinc_mmap_file
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc      4879 Mar 13 17:56 pilotlog.txt
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc   1887584 Mar 13 17:56 log.48955006._048784.job.log.1
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc       357 Mar 13 17:56 output.list
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc       620 Mar 13 17:56 runtime_log
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc   2344960 Mar 13 17:56 result.tar.gz
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc      8816 Mar 13 17:56 runtime_log.err
[2026-03-13 17:56:51] -rw-------. 1 boinc boinc       656 Mar 13 17:56 q7EMDm1Y3K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmBQlLDmMEt1Fn.diag
[2026-03-13 17:56:51] -rw-r--r--. 1 boinc boinc     20658 Mar 13 17:56 stderr.txt
[2026-03-13 17:56:52] HITS file was successfully produced:
[2026-03-13 17:56:52] -rw-------. 1 boinc boinc 187291138 Mar 13 17:54 shared/HITS.pool.root.1
[2026-03-13 17:56:52]  *** Contents of shared directory: ***
[2026-03-13 17:56:52] total 619924
[2026-03-13 17:56:52] -rw-r--r--. 2 boinc boinc 444545936 Mar 13 14:04 ATLAS.root_0
[2026-03-13 17:56:52] -rw-r--r--. 2 boinc boinc    597528 Mar 13 14:04 input.tar.gz
[2026-03-13 17:56:52] -rw-r--r--. 2 boinc boinc     15845 Mar 13 14:04 start_atlas.sh
[2026-03-13 17:56:52] -rw-------. 1 boinc boinc 187291138 Mar 13 17:54 HITS.pool.root.1
[2026-03-13 17:56:52] -rw-------. 1 boinc boinc   2344960 Mar 13 17:56 result.tar.gz
17:56:53 (1493): run_atlas exited; CPU time 51751.558068
17:56:53 (1493): called boinc_finish(0)

</stderr_txt>
]]>

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