Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:53 (2656117): wrapper (7.7.26015): starting
00:01:53 (2656117): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 00:01:53] Arguments: --nthreads 8
[2026-03-13 00:01:53] Threads: 8
[2026-03-13 00:01:53] Checking for CVMFS
[2026-03-13 00:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 00:01:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 00:01:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 00:01:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 00:01:57] 2.13.3.0 9358 181929 346780 157225 3 659 18363163 32935937 27782 16776704 0 774020490 99.701 585966072 32792 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-13 00:01:57] CVMFS is ok
[2026-03-13 00:01:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 00:01:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 00:01:57] Further information can be found at the LHC@home message board.
[2026-03-13 00:01:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 00:01:57] Checking for apptainer binary...
[2026-03-13 00:01:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 00:01:57] Running /usr/bin/apptainer --version
[2026-03-13 00:01:57] apptainer version 1.4.5-2.el9
[2026-03-13 00:01:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 00:01:58] c-6-6.aglt2.org
[2026-03-13 00:01:58] apptainer works
[2026-03-13 00:01:58] Set ATHENA_PROC_NUMBER=8
[2026-03-13 00:01:58] Set ATHENA_CORE_NUMBER=8
[2026-03-13 00:01:58] Starting ATLAS job with PandaID=7043633602
[2026-03-13 00:01:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 03:06:42]  *** The last 200 lines of the pilot log: ***
[2026-03-15 03:06:42] 2026-03-15 04:53:23,758 | INFO     | mean x: 1773462573.1027777
[2026-03-15 03:06:42] 2026-03-15 04:53:23,758 | INFO     | mean y: 2484020.025
[2026-03-15 03:06:42] 2026-03-15 04:53:23,758 | INFO     | intersect: -978843522.9666338
[2026-03-15 03:06:42] 2026-03-15 04:53:23,805 | INFO     | chi2: 9.90674879245044
[2026-03-15 03:06:42] 2026-03-15 04:53:23,808 | INFO     | sum of square deviations: 7368741787791.76
[2026-03-15 03:06:42] 2026-03-15 04:53:24,376 | INFO     | monitor loop #9011: job 0:7043633602 is in state 'finished'
[2026-03-15 03:06:42] 2026-03-15 04:53:24,547 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 03:06:42] 2026-03-15 04:53:25,805 | INFO     | sum of deviations: 5004182303036.116
[2026-03-15 03:06:42] 2026-03-15 04:53:25,806 | INFO     | mean x: 1773462420.603826
[2026-03-15 03:06:42] 2026-03-15 04:53:25,806 | INFO     | mean y: 2487605.4452173915
[2026-03-15 03:06:42] 2026-03-15 04:53:25,806 | INFO     | intersect: -1201887512.5686288
[2026-03-15 03:06:42] 2026-03-15 04:53:25,810 | INFO     | chi2: 6.443035444424449
[2026-03-15 03:06:42] 2026-03-15 04:53:25,810 | INFO     | current chi2=6.443035444424449 (change=34.96316925554382 %)
[2026-03-15 03:06:42] 2026-03-15 04:53:25,814 | INFO     | sum of square deviations: 7330363302381.859
[2026-03-15 03:06:42] 2026-03-15 04:53:27,084 | INFO     | monitor loop #9012: job 0:7043633602 is in state 'finished'
[2026-03-15 03:06:42] 2026-03-15 04:53:27,084 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 03:06:42] 2026-03-15 04:53:29,335 | INFO     | sum of deviations: 4987911299727.3545
[2026-03-15 03:06:42] 2026-03-15 04:53:29,335 | INFO     | mean x: 1773462268.1041813
[2026-03-15 03:06:42] 2026-03-15 04:53:29,335 | INFO     | mean y: 2487540.811498258
[2026-03-15 03:06:42] 2026-03-15 04:53:29,335 | INFO     | intersect: -1204256534.730113
[2026-03-15 03:06:42] 2026-03-15 04:53:29,542 | INFO     | chi2: 6.442767281201483
[2026-03-15 03:06:42] 2026-03-15 04:53:29,558 | INFO     | current chi2=6.442767281201483 (change=0.004162063444770041 %)
[2026-03-15 03:06:42] 2026-03-15 04:53:29,558 | INFO     | right removable region: 2869
[2026-03-15 03:06:42] 2026-03-15 04:53:29,583 | INFO     | sum of square deviations: 7368740728831.762
[2026-03-15 03:06:42] 2026-03-15 04:53:29,677 | INFO     | monitor loop #9013: job 0:7043633602 is in state 'finished'
[2026-03-15 03:06:42] 2026-03-15 04:53:29,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 03:06:42] 2026-03-15 04:53:32,286 | INFO     | monitor loop #9014: job 0:7043633602 is in state 'finished'
[2026-03-15 03:06:42] 2026-03-15 04:53:32,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 03:06:42] 2026-03-15 04:53:32,985 | INFO     | sum of deviations: 3201664468655.2246
[2026-03-15 03:06:42] 2026-03-15 04:53:32,985 | INFO     | mean x: 1773462725.603826
[2026-03-15 03:06:42] 2026-03-15 04:53:32,985 | INFO     | mean y: 2487571.6340869567
[2026-03-15 03:06:42] 2026-03-15 04:53:32,985 | INFO     | intersect: -768069135.9501157
[2026-03-15 03:06:42] 2026-03-15 04:53:33,062 | INFO     | chi2: 6.440832904466413
[2026-03-15 03:06:42] 2026-03-15 04:53:33,062 | INFO     | current chi2=6.440832904466413 (change=34.98540197794529 %)
[2026-03-15 03:06:42] 2026-03-15 04:53:33,107 | INFO     | sum of square deviations: 7330362061457.0625
[2026-03-15 03:06:42] 2026-03-15 04:53:35,014 | INFO     | monitor loop #9015: job 0:7043633602 is in state 'finished'
[2026-03-15 03:06:42] 2026-03-15 04:53:35,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 03:06:42] 2026-03-15 04:53:35,568 | INFO     | PID=2667646 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 03:06:42] 2026-03-15 04:53:35,568 | INFO     | .. there are 43 such processes running
[2026-03-15 03:06:42] 2026-03-15 04:53:35,756 | INFO     | sum of deviations: 2824773296196.3237
[2026-03-15 03:06:42] 2026-03-15 04:53:35,756 | INFO     | mean x: 1773462878.1038327
[2026-03-15 03:06:42] 2026-03-15 04:53:35,756 | INFO     | mean y: 2489068.935191638
[2026-03-15 03:06:42] 2026-03-15 04:53:35,757 | INFO     | intersect: -680919272.6805313
[2026-03-15 03:06:42] 2026-03-15 04:53:35,808 | INFO     | chi2: 5.844144561226922
[2026-03-15 03:06:42] 2026-03-15 04:53:35,809 | INFO     | current chi2=5.844144561226922 (change=9.264148784634923 %)
[2026-03-15 03:06:42] 2026-03-15 04:53:35,809 | INFO     | left removable region: 20
[2026-03-15 03:06:42] 2026-03-15 04:53:35,847 | INFO     | sum of square deviations: 7170626965856.358
[2026-03-15 03:06:42] 2026-03-15 04:53:36,637 | INFO     | time since job start (175765s) is within the limit (345600.0s)
[2026-03-15 03:06:42] 2026-03-15 04:53:37,015 | INFO     | sum of deviations: 3088176741584.839
[2026-03-15 03:06:42] 2026-03-15 04:53:37,015 | INFO     | mean x: 1773462847.6058266
[2026-03-15 03:06:42] 2026-03-15 04:53:37,015 | INFO     | mean y: 2495127.72025272
[2026-03-15 03:06:42] 2026-03-15 04:53:37,015 | INFO     | intersect: -761282815.8430216
[2026-03-15 03:06:42] 2026-03-15 04:53:37,019 | INFO     | chi2: 1.5802078201678935
[2026-03-15 03:06:42] 2026-03-15 04:53:37,019 | INFO     | current memory leak: 0.43 B/s (using 2849 data points, chi2=1.58)
[2026-03-15 03:06:42] 2026-03-15 04:53:37,021 | INFO     | could have reported an average CPU frequency of 2600 MHz (100 samples)
[2026-03-15 03:06:42] 2026-03-15 04:53:37,022 | INFO     | ..............................
[2026-03-15 03:06:42] 2026-03-15 04:53:37,022 | INFO     | . Timing measurements:
[2026-03-15 03:06:42] 2026-03-15 04:53:37,022 | INFO     | . get job = 0 s
[2026-03-15 03:06:42] 2026-03-15 04:53:37,022 | INFO     | . initial setup = 46 s
[2026-03-15 03:06:42] 2026-03-15 04:53:37,022 | INFO     | . payload setup = 54 s
[2026-03-15 03:06:42] 2026-03-15 04:53:37,022 | INFO     | . stage-in = 0 s
[2026-03-15 03:06:42] 2026-03-15 04:53:37,022 | INFO     | . payload execution = 175675 s
[2026-03-15 03:06:42] 2026-03-15 04:53:37,022 | INFO     | . stage-out = 8 s
[2026-03-15 03:06:42] 2026-03-15 04:53:37,022 | INFO     | . log creation = 2 s
[2026-03-15 03:06:42] 2026-03-15 04:53:37,023 | INFO     | ..............................
[2026-03-15 03:06:42] 2026-03-15 04:53:37,727 | INFO     | 
[2026-03-15 03:06:42] 2026-03-15 04:53:37,727 | INFO     | job summary report
[2026-03-15 03:06:42] 2026-03-15 04:53:37,727 | INFO     | --------------------------------------------------
[2026-03-15 03:06:42] 2026-03-15 04:53:37,727 | INFO     | PanDA job id: 7043633602
[2026-03-15 03:06:42] 2026-03-15 04:53:37,727 | INFO     | task id: 48955006
[2026-03-15 03:06:42] 2026-03-15 04:53:37,727 | INFO     | errors: (none)
[2026-03-15 03:06:42] 2026-03-15 04:53:37,727 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 03:06:42] 2026-03-15 04:53:37,728 | INFO     | pilot state: finished 
[2026-03-15 03:06:42] 2026-03-15 04:53:37,728 | INFO     | transexitcode: 0
[2026-03-15 03:06:42] 2026-03-15 04:53:37,728 | INFO     | exeerrorcode: 0
[2026-03-15 03:06:42] 2026-03-15 04:53:37,728 | INFO     | exeerrordiag: 
[2026-03-15 03:06:42] 2026-03-15 04:53:37,728 | INFO     | exitcode: 0
[2026-03-15 03:06:42] 2026-03-15 04:53:37,728 | INFO     | exitmsg: OK
[2026-03-15 03:06:42] 2026-03-15 04:53:37,728 | INFO     | cpuconsumptiontime: 46567 s
[2026-03-15 03:06:42] 2026-03-15 04:53:37,728 | INFO     | nevents: 400
[2026-03-15 03:06:42] 2026-03-15 04:53:37,728 | INFO     | neventsw: 0
[2026-03-15 03:06:42] 2026-03-15 04:53:37,729 | INFO     | pid: 2685691
[2026-03-15 03:06:42] 2026-03-15 04:53:37,729 | INFO     | pgrp: 2685691
[2026-03-15 03:06:42] 2026-03-15 04:53:37,729 | INFO     | corecount: 8
[2026-03-15 03:06:42] 2026-03-15 04:53:37,729 | INFO     | event service: False
[2026-03-15 03:06:42] 2026-03-15 04:53:37,729 | INFO     | sizes: {0: 2279741, 1: 2279797, 2: 2279853, 3: 2280314, 175735: 2383821, 175736: 2383820, 175745: 2393002, 175747: 2393058, 175763: 2393252}
[2026-03-15 03:06:42] 2026-03-15 04:53:37,729 | INFO     | --------------------------------------------------
[2026-03-15 03:06:42] 2026-03-15 04:53:37,729 | INFO     | 
[2026-03-15 03:06:42] 2026-03-15 04:53:37,729 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-15 03:06:42] 2026-03-15 04:53:37,882 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,883 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,883 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,883 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,884 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 03:06:42] 2026-03-15 04:53:37,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,884 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 03:06:42] 2026-03-15 04:53:37,885 | INFO     | job 7043633602 has completed (purged errors)
[2026-03-15 03:06:42] 2026-03-15 04:53:37,885 | INFO     | overall cleanup function is called
[2026-03-15 03:06:42] 2026-03-15 04:53:38,935 | INFO     | --- collectZombieJob: --- 10, [2685691]
[2026-03-15 03:06:42] 2026-03-15 04:53:38,935 | INFO     | zombie collector waiting for pid 2685691
[2026-03-15 03:06:42] 2026-03-15 04:53:38,935 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 03:06:42] 2026-03-15 04:53:38,935 | INFO     | collected zombie processes
[2026-03-15 03:06:42] 2026-03-15 04:53:38,935 | INFO     | will attempt to kill all subprocesses of pid=2685691
[2026-03-15 03:06:42] 2026-03-15 04:53:42,495 | INFO     | process IDs to be killed: [2685691] (in reverse order)
[2026-03-15 03:06:42] 2026-03-15 04:53:44,702 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 03:06:42] 2026-03-15 04:53:44,702 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 03:06:42] 2026-03-15 04:53:44,827 | INFO     | did not find any defunct processes belonging to 2685691
[2026-03-15 03:06:42] 2026-03-15 04:53:44,909 | INFO     | did not find any defunct processes belonging to 2685691
[2026-03-15 03:06:42] 2026-03-15 04:53:44,910 | INFO     | ready for new job
[2026-03-15 03:06:42] 2026-03-15 04:53:44,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 03:06:42] 2026-03-15 04:53:44,967 | INFO     | **************************************
[2026-03-15 03:06:42] 2026-03-15 04:53:44,967 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 03:06:42] 2026-03-15 04:53:44,967 | INFO     | **************************************
[2026-03-15 03:06:42] 2026-03-15 04:53:44,967 | INFO     | 
[2026-03-15 03:06:42] 2026-03-15 04:53:44,969 | INFO     | architecture information:
[2026-03-15 03:06:42] 2026-03-15 04:53:44,998 | INFO     | executing command: cat /etc/os-release
[2026-03-15 03:06:42] 2026-03-15 04:53:45,125 | INFO     | cat /etc/os-release:
[2026-03-15 03:06:42] NAME="CentOS Linux"
[2026-03-15 03:06:42] VERSION="7 (Core)"
[2026-03-15 03:06:42] ID="centos"
[2026-03-15 03:06:42] ID_LIKE="rhel fedora"
[2026-03-15 03:06:42] VERSION_ID="7"
[2026-03-15 03:06:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 03:06:42] ANSI_COLOR="0;31"
[2026-03-15 03:06:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 03:06:42] HOME_URL="https://www.centos.org/"
[2026-03-15 03:06:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 03:06:42] 
[2026-03-15 03:06:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 03:06:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 03:06:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 03:06:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 03:06:42] 
[2026-03-15 03:06:42] 2026-03-15 04:53:45,125 | INFO     | **************************************
[2026-03-15 03:06:42] 2026-03-15 04:53:45,629 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-15 03:06:42] 2026-03-15 04:53:45,824 | INFO     | sufficient remaining disk space (74263298048 B)
[2026-03-15 03:06:42] 2026-03-15 04:53:45,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 03:06:42] 2026-03-15 04:53:45,824 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 03:06:42] 2026-03-15 04:53:45,825 | INFO     | update_server=False
[2026-03-15 03:06:42] 2026-03-15 04:53:45,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 03:06:42] 2026-03-15 04:53:45,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 03:06:42] 2026-03-15 04:53:45,870 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 03:06:42] 2026-03-15 04:53:45,937 | INFO     | all data control threads have been joined
[2026-03-15 03:06:42] 2026-03-15 04:53:46,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 03:06:42] 2026-03-15 04:53:46,197 | INFO     | aborting loop
[2026-03-15 03:06:42] 2026-03-15 04:53:46,420 | INFO     | all payload control threads have been joined
[2026-03-15 03:06:42] 2026-03-15 04:53:46,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 03:06:42] 2026-03-15 04:53:46,831 | INFO     | [job] retrieve thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:46,943 | INFO     | [data] control thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:47,089 | INFO     | all job control threads have been joined
[2026-03-15 03:06:42] 2026-03-15 04:53:47,145 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:47,213 | INFO     | [job] job monitor thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:47,235 | INFO     | [data] copytool_in thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:47,426 | INFO     | [payload] control thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:47,496 | INFO     | [payload] validate_post thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:47,779 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:47,788 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:47,808 | INFO     | [job] queue monitor thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:47,837 | INFO     | [data] copytool_out thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:48,097 | INFO     | [job] control thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:48,126 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:48,126 | INFO     | [job] validate thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:48,367 | INFO     | [payload] failed_post thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:49,063 | INFO     | [monitor] cgroup control has ended
[2026-03-15 03:06:42] 2026-03-15 04:53:49,917 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 03:06:42] 2026-03-15 04:53:50,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018786363200)>', '<ExcThread(monitor, started 140017544460032)>']
[2026-03-15 03:06:42] 2026-03-15 04:53:55,917 | INFO     | all workflow threads have been joined
[2026-03-15 03:06:42] 2026-03-15 04:53:55,917 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 03:06:42] 2026-03-15 04:53:55,917 | INFO     | traces error code: 0
[2026-03-15 03:06:42] 2026-03-15 04:53:55,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 03:06:42] 2026-03-15 04:54:11,914 | INFO     | PID=2667646 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 03:06:42] 2026-03-15 04:54:11,915 | INFO     | .. there are 43 such processes running
[2026-03-15 03:06:42] 2026-03-15 04:54:11,915 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 03:06:42] 2026-03-15 04:54:11,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 03:06:42] 2026-03-15 04:54:11,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 03:06:42] 2026-03-15 04:54:11,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 03:06:42] 2026-03-15 04:54:11,916 | INFO     | [monitor] control thread has ended
[2026-03-15 03:06:42] 2026-03-15 04:54:12,100 [wrapper] ==== pilot stdout END ====
[2026-03-15 03:06:42] 2026-03-15 04:54:12,125 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 03:06:42] 2026-03-15 04:54:12,161 [wrapper] pilotpid: 2667646
[2026-03-15 03:06:42] 2026-03-15 04:54:12,184 [wrapper] Pilot exit status: 0
[2026-03-15 03:06:42] 2026-03-15 04:54:12,381 [wrapper] pandaids: 7043633602
[2026-03-15 03:06:42] 2026-03-15 04:54:13,369 [wrapper] cleanup supervisor_pilot 2165017 2667647
[2026-03-15 03:06:42] 2026-03-15 04:54:13,416 [wrapper] Test setup, not cleaning
[2026-03-15 03:06:42] 2026-03-15 04:54:13,482 [wrapper] apfmon messages muted
[2026-03-15 03:06:42] 2026-03-15 04:54:13,571 [wrapper] ==== wrapper stdout END ====
[2026-03-15 03:06:42] 2026-03-15 04:54:13,604 [wrapper] ==== wrapper stderr END ====
[2026-03-15 03:06:42]  *** Error codes and diagnostics ***
[2026-03-15 03:06:42]     "exeErrorCode": 0,
[2026-03-15 03:06:42]     "exeErrorDiag": "",
[2026-03-15 03:06:42]     "pilotErrorCode": 0,
[2026-03-15 03:06:42]     "pilotErrorDiag": "",
[2026-03-15 03:06:42]  *** Listing of results directory ***
[2026-03-15 03:06:42] total 655680
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 18:18 pilot3.tar.gz
[2026-03-15 03:06:42] -rwx------. 1 boincer umatlas     36322 Mar 12 18:19 runpilot2-wrapper.sh
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 18:19 queuedata.json
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas       100 Mar 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 03:06:42] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 13 00:01 run_atlas
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas       105 Mar 13 00:01 job.xml
[2026-03-15 03:06:42] -rw-r--r--. 2 boincer umatlas 437503244 Mar 13 00:01 EVNT.46701403._000963.pool.root.1
[2026-03-15 03:06:42] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 00:01 start_atlas.sh
[2026-03-15 03:06:42] drwxrwx--x. 2 boincer umatlas      4096 Mar 13 00:01 shared
[2026-03-15 03:06:42] -rw-r--r--. 2 boincer umatlas    597523 Mar 13 00:01 input.tar.gz
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas         0 Mar 13 00:01 boinc_lockfile
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas      2564 Mar 13 00:01 pandaJob.out
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas        57 Mar 13 00:02 setup.sh.local
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas   1006514 Mar 13 00:03 agis_schedconf.cvmfs.json
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas       438 Mar 13 00:04 workernode_map.json
[2026-03-15 03:06:42] drwx------. 5 boincer umatlas      4096 Mar 13 00:04 pilot3
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas 185953827 Mar 15 00:48 HITS.48955006._048642.pool.root.1
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas       531 Mar 15 00:48 boinc_task_state.xml
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas      1054 Mar 15 00:53 memory_monitor_summary.json
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas   1511579 Mar 15 00:53 agis_ddmendpoints.agis.ALL.json
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas   2307185 Mar 15 00:53 log.48955006._048642.job.log.tgz.1
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas        95 Mar 15 00:53 pilot_heartbeat.json
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas      6412 Mar 15 00:53 heartbeat.json
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas       823 Mar 15 00:54 pilotlog.txt
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas  19705232 Mar 15 00:54 log.48955006._048642.job.log.1
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas       357 Mar 15 00:54 output.list
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas       620 Mar 15 00:54 runtime_log
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas  22026240 Mar 15 00:54 result.tar.gz
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas      9328 Mar 15 00:54 runtime_log.err
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas       661 Mar 15 00:54 aUKLDmtY3K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmzPlLDm4iewwn.diag
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas      6658 Mar 15 03:01 init_data.xml
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas      8192 Mar 15 03:06 boinc_mmap_file
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas     21490 Mar 15 03:06 stderr.txt
[2026-03-15 03:06:42] -rw-r--r--. 1 boincer umatlas        27 Mar 15 03:06 wrapper_checkpoint.txt
[2026-03-15 03:06:42] HITS file was successfully produced:
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas 185953827 Mar 15 00:48 shared/HITS.pool.root.1
[2026-03-15 03:06:42]  *** Contents of shared directory: ***
[2026-03-15 03:06:42] total 630968
[2026-03-15 03:06:42] -rw-r--r--. 2 boincer umatlas 437503244 Mar 13 00:01 ATLAS.root_0
[2026-03-15 03:06:42] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 00:01 start_atlas.sh
[2026-03-15 03:06:42] -rw-r--r--. 2 boincer umatlas    597523 Mar 13 00:01 input.tar.gz
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas 185953827 Mar 15 00:48 HITS.pool.root.1
[2026-03-15 03:06:42] -rw-------. 1 boincer umatlas  22026240 Mar 15 00:54 result.tar.gz
03:06:44 (2656117): run_atlas exited; CPU time 55551.238326
03:06:44 (2656117): called boinc_finish(0)

</stderr_txt>
]]>

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