Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:12 (3223183): wrapper (7.7.26015): starting
00:01:12 (3223183): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 00:01:12] Arguments: --nthreads 8
[2026-03-13 00:01:12] Threads: 8
[2026-03-13 00:01:12] Checking for CVMFS
[2026-03-13 00:01:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 00:01:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 00:01:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 00:01:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 00:01:17] 2.13.3.0 10819 182189 365480 157225 1 433 26639458 32935936 27672 16776704 0 752704526 99.699 591955020 33102 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-13 00:01:17] CVMFS is ok
[2026-03-13 00:01:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 00:01:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 00:01:17] Further information can be found at the LHC@home message board.
[2026-03-13 00:01:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 00:01:17] Checking for apptainer binary...
[2026-03-13 00:01:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 00:01:17] Running /usr/bin/apptainer --version
[2026-03-13 00:01:17] apptainer version 1.4.5-2.el9
[2026-03-13 00:01:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 00:01:19] c-8-37.aglt2.org
[2026-03-13 00:01:19] apptainer works
[2026-03-13 00:01:19] Set ATHENA_PROC_NUMBER=8
[2026-03-13 00:01:19] Set ATHENA_CORE_NUMBER=8
[2026-03-13 00:01:19] Starting ATLAS job with PandaID=7043586135
[2026-03-13 00:01:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 13:54:33]  *** The last 200 lines of the pilot log: ***
[2026-03-14 13:54:33] 2026-03-14 17:53:50,644 | INFO     | total size of present files: 0 B (workdir size: 5685319 B)
[2026-03-14 13:54:33] 2026-03-14 17:53:50,644 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7043586135/HITS.48955010._025320.pool.root.1 since it does not exist
[2026-03-14 13:54:33] 2026-03-14 17:53:50,731 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 13:54:33] 2026-03-14 17:53:51,729 | INFO     | job 7043586135 has state=finished
[2026-03-14 13:54:33] 2026-03-14 17:53:51,729 | INFO     | preparing for final server update for job 7043586135 in state='finished'
[2026-03-14 13:54:33] 2026-03-14 17:53:51,729 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7043586135/jobReport.json
[2026-03-14 13:54:33] 2026-03-14 17:53:51,732 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 13:54:33] 2026-03-14 17:53:51,732 | INFO     | this job has now completed (state=finished)
[2026-03-14 13:54:33] 2026-03-14 17:53:51,799 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 13:54:33] 2026-03-14 17:53:51,799 | INFO     | log transfer has been attempted: DONE
[2026-03-14 13:54:33] 2026-03-14 17:53:51,799 | INFO     | job 7043586135 has finished - writing final server update
[2026-03-14 13:54:33] 2026-03-14 17:53:51,799 | INFO     | total number of processed events: 400 (read)
[2026-03-14 13:54:33] 2026-03-14 17:53:51,829 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7043586135/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 13:54:33] 2026-03-14 17:53:51,829 | INFO     | extracted standard info from prmon json
[2026-03-14 13:54:33] 2026-03-14 17:53:51,829 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 13:54:33] 2026-03-14 17:53:51,830 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 13:54:33] 2026-03-14 17:53:51,830 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 13:54:33] 2026-03-14 17:53:51,830 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 13:54:33] 2026-03-14 17:53:51,872 | INFO     | fitting pss+swap vs Time
[2026-03-14 13:54:33] 2026-03-14 17:53:51,875 | INFO     | sum of square deviations: 3447935086940.386
[2026-03-14 13:54:33] 2026-03-14 17:53:53,473 | INFO     | sum of deviations: 5358968023976.536
[2026-03-14 13:54:33] 2026-03-14 17:53:53,474 | INFO     | mean x: 1773442715.860215
[2026-03-14 13:54:33] 2026-03-14 17:53:53,474 | INFO     | mean y: 2460841.8382616485
[2026-03-14 13:54:33] 2026-03-14 17:53:53,474 | INFO     | intersect: -2753920170.857212
[2026-03-14 13:54:33] 2026-03-14 17:53:53,501 | INFO     | chi2: 15.092165568225393
[2026-03-14 13:54:33] 2026-03-14 17:53:53,535 | INFO     | sum of square deviations: 3424815494019.7397
[2026-03-14 13:54:33] 2026-03-14 17:53:54,807 | INFO     | PID=3233341 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-14 13:54:33] 2026-03-14 17:53:54,875 | INFO     | .. there are 42 such processes running
[2026-03-14 13:54:33] 2026-03-14 17:53:55,411 | INFO     | sum of deviations: 6067269733050.642
[2026-03-14 13:54:33] 2026-03-14 17:53:55,411 | INFO     | mean x: 1773442563.361024
[2026-03-14 13:54:33] 2026-03-14 17:53:55,412 | INFO     | mean y: 2465514.032779524
[2026-03-14 13:54:33] 2026-03-14 17:53:55,412 | INFO     | intersect: -3139296255.8414335
[2026-03-14 13:54:33] 2026-03-14 17:53:55,440 | INFO     | chi2: 11.490994790770051
[2026-03-14 13:54:33] 2026-03-14 17:53:55,440 | INFO     | current chi2=11.490994790770051 (change=23.861193154659944 %)
[2026-03-14 13:54:33] 2026-03-14 17:53:55,440 | INFO     | right removable region: 2226
[2026-03-14 13:54:33] 2026-03-14 17:53:55,469 | INFO     | sum of square deviations: 3424815139731.4604
[2026-03-14 13:54:33] 2026-03-14 17:53:55,879 | INFO     | time since job start (136243s) is within the limit (345600.0s)
[2026-03-14 13:54:33] 2026-03-14 17:53:56,096 | INFO     | sum of deviations: 4656093280927.264
[2026-03-14 13:54:33] 2026-03-14 17:53:56,096 | INFO     | mean x: 1773442868.3605747
[2026-03-14 13:54:33] 2026-03-14 17:53:56,096 | INFO     | mean y: 2465477.424337674
[2026-03-14 13:54:33] 2026-03-14 17:53:56,096 | INFO     | intersect: -2408559668.9225397
[2026-03-14 13:54:33] 2026-03-14 17:53:56,107 | INFO     | chi2: 11.486321073014576
[2026-03-14 13:54:33] 2026-03-14 17:53:56,108 | INFO     | current chi2=11.486321073014576 (change=23.89216099512225 %)
[2026-03-14 13:54:33] 2026-03-14 17:53:56,108 | INFO     | left removable region: 10
[2026-03-14 13:54:33] 2026-03-14 17:53:56,114 | INFO     | sum of square deviations: 3374315966063.7534
[2026-03-14 13:54:33] 2026-03-14 17:53:56,825 | INFO     | sum of deviations: 4790353840640.691
[2026-03-14 13:54:33] 2026-03-14 17:53:56,825 | INFO     | mean x: 1773442837.8619134
[2026-03-14 13:54:33] 2026-03-14 17:53:56,825 | INFO     | mean y: 2473945.43366426
[2026-03-14 13:54:33] 2026-03-14 17:53:56,866 | INFO     | intersect: -2515197427.0604534
[2026-03-14 13:54:33] 2026-03-14 17:53:56,937 | INFO     | chi2: 5.563625037453344
[2026-03-14 13:54:33] 2026-03-14 17:53:56,937 | INFO     | current memory leak: 1.42 B/s (using 2216 data points, chi2=5.56)
[2026-03-14 13:54:33] 2026-03-14 17:53:56,957 | INFO     | could have reported an average CPU frequency of 2599 MHz (79 samples)
[2026-03-14 13:54:33] 2026-03-14 17:53:56,957 | INFO     | ..............................
[2026-03-14 13:54:33] 2026-03-14 17:53:56,958 | INFO     | . Timing measurements:
[2026-03-14 13:54:33] 2026-03-14 17:53:56,958 | INFO     | . get job = 0 s
[2026-03-14 13:54:33] 2026-03-14 17:53:56,958 | INFO     | . initial setup = 46 s
[2026-03-14 13:54:33] 2026-03-14 17:53:56,958 | INFO     | . payload setup = 44 s
[2026-03-14 13:54:33] 2026-03-14 17:53:56,958 | INFO     | . stage-in = 0 s
[2026-03-14 13:54:33] 2026-03-14 17:53:56,958 | INFO     | . payload execution = 136174 s
[2026-03-14 13:54:33] 2026-03-14 17:53:56,958 | INFO     | . stage-out = 8 s
[2026-03-14 13:54:33] 2026-03-14 17:53:56,958 | INFO     | . log creation = 2 s
[2026-03-14 13:54:33] 2026-03-14 17:53:56,958 | INFO     | ..............................
[2026-03-14 13:54:33] 2026-03-14 17:53:57,060 | INFO     | number of running child processes to parent process 3245355: 1
[2026-03-14 13:54:33] 2026-03-14 17:53:57,060 | INFO     | maximum number of monitored processes: 7
[2026-03-14 13:54:33] 2026-03-14 17:53:57,060 | INFO     | aborting job monitoring since job object (job id=7043586135) has expired
[2026-03-14 13:54:33] 2026-03-14 17:53:57,125 | INFO     | 
[2026-03-14 13:54:33] 2026-03-14 17:53:57,125 | INFO     | job summary report
[2026-03-14 13:54:33] 2026-03-14 17:53:57,125 | INFO     | --------------------------------------------------
[2026-03-14 13:54:33] 2026-03-14 17:53:57,126 | INFO     | PanDA job id: 7043586135
[2026-03-14 13:54:33] 2026-03-14 17:53:57,126 | INFO     | task id: 48955010
[2026-03-14 13:54:33] 2026-03-14 17:53:57,126 | INFO     | errors: (none)
[2026-03-14 13:54:33] 2026-03-14 17:53:57,126 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 13:54:33] 2026-03-14 17:53:57,126 | INFO     | pilot state: finished 
[2026-03-14 13:54:33] 2026-03-14 17:53:57,126 | INFO     | transexitcode: 0
[2026-03-14 13:54:33] 2026-03-14 17:53:57,126 | INFO     | exeerrorcode: 0
[2026-03-14 13:54:33] 2026-03-14 17:53:57,126 | INFO     | exeerrordiag: 
[2026-03-14 13:54:33] 2026-03-14 17:53:57,126 | INFO     | exitcode: 0
[2026-03-14 13:54:33] 2026-03-14 17:53:57,126 | INFO     | exitmsg: OK
[2026-03-14 13:54:33] 2026-03-14 17:53:57,127 | INFO     | cpuconsumptiontime: 46578 s
[2026-03-14 13:54:33] 2026-03-14 17:53:57,127 | INFO     | nevents: 400
[2026-03-14 13:54:33] 2026-03-14 17:53:57,127 | INFO     | neventsw: 0
[2026-03-14 13:54:33] 2026-03-14 17:53:57,127 | INFO     | pid: 3245355
[2026-03-14 13:54:33] 2026-03-14 17:53:57,127 | INFO     | pgrp: 3245355
[2026-03-14 13:54:33] 2026-03-14 17:53:57,127 | INFO     | corecount: 8
[2026-03-14 13:54:33] 2026-03-14 17:53:57,127 | INFO     | event service: False
[2026-03-14 13:54:33] 2026-03-14 17:53:57,127 | INFO     | sizes: {0: 2279746, 1: 2280179, 2: 2280235, 4: 2280235, 136223: 2367478, 136232: 2376476, 136234: 2376688, 136240: 2376882}
[2026-03-14 13:54:33] 2026-03-14 17:53:57,127 | INFO     | --------------------------------------------------
[2026-03-14 13:54:33] 2026-03-14 17:53:57,128 | INFO     | 
[2026-03-14 13:54:33] 2026-03-14 17:53:57,128 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 13:54:33] 2026-03-14 17:53:57,424 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,424 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,424 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,425 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,426 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,426 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,426 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,426 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 13:54:33] 2026-03-14 17:53:57,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,426 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 13:54:33] 2026-03-14 17:53:57,426 | INFO     | job 7043586135 has completed (purged errors)
[2026-03-14 13:54:33] 2026-03-14 17:53:57,427 | INFO     | overall cleanup function is called
[2026-03-14 13:54:33] 2026-03-14 17:53:58,444 | INFO     | --- collectZombieJob: --- 10, [3245355]
[2026-03-14 13:54:33] 2026-03-14 17:53:58,444 | INFO     | zombie collector waiting for pid 3245355
[2026-03-14 13:54:33] 2026-03-14 17:53:58,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 13:54:33] 2026-03-14 17:53:58,444 | INFO     | collected zombie processes
[2026-03-14 13:54:33] 2026-03-14 17:53:58,444 | INFO     | will attempt to kill all subprocesses of pid=3245355
[2026-03-14 13:54:33] 2026-03-14 17:54:01,097 | INFO     | process IDs to be killed: [3245355] (in reverse order)
[2026-03-14 13:54:33] 2026-03-14 17:54:01,828 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 13:54:33] 2026-03-14 17:54:01,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 13:54:33] 2026-03-14 17:54:01,849 | INFO     | did not find any defunct processes belonging to 3245355
[2026-03-14 13:54:33] 2026-03-14 17:54:01,869 | INFO     | did not find any defunct processes belonging to 3245355
[2026-03-14 13:54:33] 2026-03-14 17:54:01,870 | INFO     | ready for new job
[2026-03-14 13:54:33] 2026-03-14 17:54:01,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 13:54:33] 2026-03-14 17:54:01,926 | INFO     | **************************************
[2026-03-14 13:54:33] 2026-03-14 17:54:01,983 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 13:54:33] 2026-03-14 17:54:01,983 | INFO     | **************************************
[2026-03-14 13:54:33] 2026-03-14 17:54:01,983 | INFO     | 
[2026-03-14 13:54:33] 2026-03-14 17:54:01,985 | INFO     | architecture information:
[2026-03-14 13:54:33] 2026-03-14 17:54:02,033 | INFO     | executing command: cat /etc/os-release
[2026-03-14 13:54:33] 2026-03-14 17:54:02,293 | INFO     | cat /etc/os-release:
[2026-03-14 13:54:33] NAME="CentOS Linux"
[2026-03-14 13:54:33] VERSION="7 (Core)"
[2026-03-14 13:54:33] ID="centos"
[2026-03-14 13:54:33] ID_LIKE="rhel fedora"
[2026-03-14 13:54:33] VERSION_ID="7"
[2026-03-14 13:54:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 13:54:33] ANSI_COLOR="0;31"
[2026-03-14 13:54:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 13:54:33] HOME_URL="https://www.centos.org/"
[2026-03-14 13:54:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 13:54:33] 
[2026-03-14 13:54:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 13:54:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 13:54:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 13:54:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 13:54:33] 
[2026-03-14 13:54:33] 2026-03-14 17:54:02,293 | INFO     | **************************************
[2026-03-14 13:54:33] 2026-03-14 17:54:02,797 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 13:54:33] 2026-03-14 17:54:02,918 | INFO     | sufficient remaining disk space (73348939776 B)
[2026-03-14 13:54:33] 2026-03-14 17:54:02,919 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 13:54:33] 2026-03-14 17:54:02,919 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 13:54:33] 2026-03-14 17:54:02,919 | INFO     | update_server=False
[2026-03-14 13:54:33] 2026-03-14 17:54:02,919 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 13:54:33] 2026-03-14 17:54:02,924 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:54:33] 2026-03-14 17:54:02,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 13:54:33] 2026-03-14 17:54:02,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 13:54:33] 2026-03-14 17:54:02,960 | INFO     | all data control threads have been joined
[2026-03-14 13:54:33] 2026-03-14 17:54:02,973 | INFO     | all payload control threads have been joined
[2026-03-14 13:54:33] 2026-03-14 17:54:03,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:54:33] 2026-03-14 17:54:03,093 | INFO     | aborting loop
[2026-03-14 13:54:33] 2026-03-14 17:54:03,496 | INFO     | all job control threads have been joined
[2026-03-14 13:54:33] 2026-03-14 17:54:03,925 | INFO     | [job] retrieve thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:03,940 | INFO     | [job] queue monitor thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:03,966 | INFO     | [data] control thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:03,979 | INFO     | [payload] control thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:04,099 | INFO     | [job] job monitor thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:04,502 | INFO     | [job] control thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:04,651 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:04,655 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:04,656 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:04,657 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:04,681 | INFO     | [data] copytool_in thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:04,819 | INFO     | [job] validate thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:04,948 | INFO     | [data] copytool_out thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:05,137 | INFO     | [payload] failed_post thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:05,286 | INFO     | [payload] validate_post thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:06,963 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 13:54:33] 2026-03-14 17:54:21,582 | INFO     | [monitor] cgroup control has ended
[2026-03-14 13:54:33] 2026-03-14 17:54:22,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019520796480)>', '<ExcThread(monitor, started 140019238188800)>']
[2026-03-14 13:54:33] 2026-03-14 17:54:27,185 | INFO     | all workflow threads have been joined
[2026-03-14 13:54:33] 2026-03-14 17:54:27,209 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 13:54:33] 2026-03-14 17:54:27,209 | INFO     | traces error code: 0
[2026-03-14 13:54:33] 2026-03-14 17:54:27,209 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 13:54:33] 2026-03-14 17:54:30,649 | INFO     | PID=3233341 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 13:54:33] 2026-03-14 17:54:30,650 | INFO     | .. there are 42 such processes running
[2026-03-14 13:54:33] 2026-03-14 17:54:30,651 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 13:54:33] 2026-03-14 17:54:30,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 13:54:33] 2026-03-14 17:54:30,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 13:54:33] 2026-03-14 17:54:30,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 13:54:33] 2026-03-14 17:54:30,652 | INFO     | [monitor] control thread has ended
[2026-03-14 13:54:33] 2026-03-14 17:54:31,169 [wrapper] ==== pilot stdout END ====
[2026-03-14 13:54:33] 2026-03-14 17:54:31,203 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 13:54:33] 2026-03-14 17:54:31,256 [wrapper] pilotpid: 3233341
[2026-03-14 13:54:33] 2026-03-14 17:54:31,300 [wrapper] Pilot exit status: 0
[2026-03-14 13:54:33] 2026-03-14 17:54:31,576 [wrapper] pandaids: 7043586135
[2026-03-14 13:54:33] 2026-03-14 17:54:31,855 [wrapper] cleanup supervisor_pilot 1081889 3233342
[2026-03-14 13:54:33] 2026-03-14 17:54:31,860 [wrapper] Test setup, not cleaning
[2026-03-14 13:54:33] 2026-03-14 17:54:31,862 [wrapper] apfmon messages muted
[2026-03-14 13:54:33] 2026-03-14 17:54:31,865 [wrapper] ==== wrapper stdout END ====
[2026-03-14 13:54:33] 2026-03-14 17:54:31,868 [wrapper] ==== wrapper stderr END ====
[2026-03-14 13:54:33]  *** Error codes and diagnostics ***
[2026-03-14 13:54:33]     "exeErrorCode": 0,
[2026-03-14 13:54:33]     "exeErrorDiag": "",
[2026-03-14 13:54:33]     "pilotErrorCode": 0,
[2026-03-14 13:54:33]     "pilotErrorDiag": "",
[2026-03-14 13:54:33]  *** Listing of results directory ***
[2026-03-14 13:54:33] total 652716
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 17:12 pilot3.tar.gz
[2026-03-14 13:54:33] -rwx------. 1 boincer umatlas     36322 Mar 12 17:13 runpilot2-wrapper.sh
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 17:15 queuedata.json
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas       100 Mar 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 13:54:33] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 13 00:01 run_atlas
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas       105 Mar 13 00:01 job.xml
[2026-03-14 13:54:33] -rw-r--r--. 2 boincer umatlas 439774084 Mar 13 00:01 EVNT.46701403._001500.pool.root.1
[2026-03-14 13:54:33] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 00:01 start_atlas.sh
[2026-03-14 13:54:33] drwxrwx--x. 2 boincer umatlas      4096 Mar 13 00:01 shared
[2026-03-14 13:54:33] -rw-r--r--. 2 boincer umatlas    597534 Mar 13 00:01 input.tar.gz
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas         0 Mar 13 00:01 boinc_lockfile
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas      2563 Mar 13 00:01 pandaJob.out
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas        57 Mar 13 00:01 setup.sh.local
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas   1006514 Mar 13 00:02 agis_schedconf.cvmfs.json
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas       432 Mar 13 00:03 workernode_map.json
[2026-03-14 13:54:33] drwx------. 5 boincer umatlas      4096 Mar 13 00:03 pilot3
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas      6660 Mar 14 13:46 init_data.xml
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas 187370767 Mar 14 13:47 HITS.48955010._025320.pool.root.1
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas       531 Mar 14 13:48 boinc_task_state.xml
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas      1068 Mar 14 13:53 memory_monitor_summary.json
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas   1511579 Mar 14 13:53 agis_ddmendpoints.agis.ALL.json
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas   2003039 Mar 14 13:53 log.48955010._025320.job.log.tgz.1
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas      6410 Mar 14 13:53 heartbeat.json
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas        95 Mar 14 13:54 pilot_heartbeat.json
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas       823 Mar 14 13:54 pilotlog.txt
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas  16642191 Mar 14 13:54 log.48955010._025320.job.log.1
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas       357 Mar 14 13:54 output.list
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas      8192 Mar 14 13:54 boinc_mmap_file
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas       620 Mar 14 13:54 runtime_log
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas        28 Mar 14 13:54 wrapper_checkpoint.txt
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas  18667520 Mar 14 13:54 result.tar.gz
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas       662 Mar 14 13:54 SanNDmvW2K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmHNlLDmorgbcn.diag
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas      9333 Mar 14 13:54 runtime_log.err
[2026-03-14 13:54:33] -rw-r--r--. 1 boincer umatlas     21701 Mar 14 13:54 stderr.txt
[2026-03-14 13:54:33] HITS file was successfully produced:
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas 187370767 Mar 14 13:47 shared/HITS.pool.root.1
[2026-03-14 13:54:33]  *** Contents of shared directory: ***
[2026-03-14 13:54:33] total 631288
[2026-03-14 13:54:33] -rw-r--r--. 2 boincer umatlas 439774084 Mar 13 00:01 ATLAS.root_0
[2026-03-14 13:54:33] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 00:01 start_atlas.sh
[2026-03-14 13:54:33] -rw-r--r--. 2 boincer umatlas    597534 Mar 13 00:01 input.tar.gz
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas 187370767 Mar 14 13:47 HITS.pool.root.1
[2026-03-14 13:54:33] -rw-------. 1 boincer umatlas  18667520 Mar 14 13:54 result.tar.gz
13:54:35 (3223183): run_atlas exited; CPU time 54155.685879
13:54:35 (3223183): called boinc_finish(0)

</stderr_txt>
]]>

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