Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:46:11 (7338): wrapper (7.7.26015): starting
13:46:11 (7338): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 13:46:11] Arguments: --nthreads 8
[2026-03-13 13:46:11] Threads: 8
[2026-03-13 13:46:11] Checking for CVMFS
[2026-03-13 13:46:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 13:46:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 13:46:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 13:46:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 13:46:15] 2.11.2.0 11184 126152 132780 157240 0 53 16133684 25165825 4822 130560 156 40509269 99.830 26927950 970 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 13:46:15] CVMFS is ok
[2026-03-13 13:46:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 13:46:15] Checking for apptainer binary...
[2026-03-13 13:46:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 13:46:15] Running /usr/bin/apptainer --version
[2026-03-13 13:46:15] apptainer version 1.3.2-1.el7
[2026-03-13 13:46:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 13:46:36] cg-vwn432.simple-grid.lan
[2026-03-13 13:46:36] apptainer works
[2026-03-13 13:46:36] Set ATHENA_PROC_NUMBER=8
[2026-03-13 13:46:36] Set ATHENA_CORE_NUMBER=8
[2026-03-13 13:46:36] Starting ATLAS job with PandaID=7043587155
[2026-03-13 13:46:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 17:41:06]  *** The last 200 lines of the pilot log: ***
[2026-03-13 17:41:06] 2026-03-13 16:40:16,335 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-13 17:41:06] 2026-03-13 16:40:16,452 | INFO     | job 7043587155 has state=finished
[2026-03-13 17:41:06] 2026-03-13 16:40:16,453 | INFO     | preparing for final server update for job 7043587155 in state='finished'
[2026-03-13 17:41:06] 2026-03-13 16:40:16,453 | INFO     | reading metadata from: /var/lib/boinc/slots/7/PanDA_Pilot-7043587155/jobReport.json
[2026-03-13 17:41:06] 2026-03-13 16:40:16,457 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/7/workernode_map.json
[2026-03-13 17:41:06] 2026-03-13 16:40:16,457 | INFO     | this job has now completed (state=finished)
[2026-03-13 17:41:06] 2026-03-13 16:40:16,457 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 17:41:06] 2026-03-13 16:40:16,457 | INFO     | log transfer has been attempted: DONE
[2026-03-13 17:41:06] 2026-03-13 16:40:16,458 | INFO     | job 7043587155 has finished - writing final server update
[2026-03-13 17:41:06] 2026-03-13 16:40:16,458 | INFO     | total number of processed events: 400 (read)
[2026-03-13 17:41:06] 2026-03-13 16:40:16,460 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7043587155/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 17:41:06] 2026-03-13 16:40:16,461 | INFO     | extracted standard info from prmon json
[2026-03-13 17:41:06] 2026-03-13 16:40:16,461 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 17:41:06] 2026-03-13 16:40:16,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 17:41:06] 2026-03-13 16:40:16,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 17:41:06] 2026-03-13 16:40:16,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 17:41:06] 2026-03-13 16:40:16,467 | INFO     | fitting pss+swap vs Time
[2026-03-13 17:41:06] 2026-03-13 16:40:16,467 | INFO     | sum of square deviations: 3346927870.0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,469 | INFO     | sum of deviations: 59446885953.99999
[2026-03-13 17:41:06] 2026-03-13 16:40:16,470 | INFO     | mean x: 1773413262.0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,470 | INFO     | mean y: 2444510.045248869
[2026-03-13 17:41:06] 2026-03-13 16:40:16,470 | INFO     | intersect: -31496261177.754677
[2026-03-13 17:41:06] 2026-03-13 16:40:16,470 | INFO     | chi2: 4.898561245225441
[2026-03-13 17:41:06] 2026-03-13 16:40:16,471 | INFO     | sum of square deviations: 3124858590.0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,473 | INFO     | sum of deviations: 72457388531.5
[2026-03-13 17:41:06] 2026-03-13 16:40:16,473 | INFO     | mean x: 1773413109.5
[2026-03-13 17:41:06] 2026-03-13 16:40:16,473 | INFO     | mean y: 2453260.550925926
[2026-03-13 17:41:06] 2026-03-13 16:40:16,473 | INFO     | intersect: -41118409972.462456
[2026-03-13 17:41:06] 2026-03-13 16:40:16,474 | INFO     | chi2: 4.164599848288472
[2026-03-13 17:41:06] 2026-03-13 16:40:16,474 | INFO     | current chi2=4.164599848288472 (change=14.983203438608642 %)
[2026-03-13 17:41:06] 2026-03-13 16:40:16,474 | INFO     | right removable region: 215
[2026-03-13 17:41:06] 2026-03-13 16:40:16,475 | INFO     | sum of square deviations: 3124858590.0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,476 | INFO     | sum of deviations: -9694440006.000004
[2026-03-13 17:41:06] 2026-03-13 16:40:16,477 | INFO     | mean x: 1773413414.5
[2026-03-13 17:41:06] 2026-03-13 16:40:16,477 | INFO     | mean y: 2491895.962962963
[2026-03-13 17:41:06] 2026-03-13 16:40:16,477 | INFO     | intersect: 5504260842.475793
[2026-03-13 17:41:06] 2026-03-13 16:40:16,477 | INFO     | chi2: 1.049226057046871
[2026-03-13 17:41:06] 2026-03-13 16:40:16,478 | INFO     | current chi2=1.049226057046871 (change=78.5809341861442 %)
[2026-03-13 17:41:06] 2026-03-13 16:40:16,478 | INFO     | sum of square deviations: 2912836010.0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,480 | INFO     | sum of deviations: -21794947542.000004
[2026-03-13 17:41:06] 2026-03-13 16:40:16,480 | INFO     | mean x: 1773413567.0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,480 | INFO     | mean y: 2500510.6492890995
[2026-03-13 17:41:06] 2026-03-13 16:40:16,480 | INFO     | intersect: 13271855713.05085
[2026-03-13 17:41:06] 2026-03-13 16:40:16,481 | INFO     | chi2: 0.8568202397088929
[2026-03-13 17:41:06] 2026-03-13 16:40:16,481 | INFO     | current chi2=0.8568202397088929 (change=18.337880197096837 %)
[2026-03-13 17:41:06] 2026-03-13 16:40:16,481 | INFO     | left removable region: 20
[2026-03-13 17:41:06] 2026-03-13 16:40:16,481 | INFO     | sum of square deviations: 2299168690.0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,483 | INFO     | sum of deviations: 4172489914.0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,483 | INFO     | mean x: 1773413689.0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,483 | INFO     | mean y: 2501462.153846154
[2026-03-13 17:41:06] 2026-03-13 16:40:16,483 | INFO     | intersect: -3215857748.6711903
[2026-03-13 17:41:06] 2026-03-13 16:40:16,484 | INFO     | chi2: 0.0007619350140709845
[2026-03-13 17:41:06] 2026-03-13 16:40:16,484 | INFO     | current memory leak: 1.81 B/s (using 195 data points, chi2=0.00)
[2026-03-13 17:41:06] 2026-03-13 16:40:16,485 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-13 17:41:06] 2026-03-13 16:40:16,485 | INFO     | ..............................
[2026-03-13 17:41:06] 2026-03-13 16:40:16,485 | INFO     | . Timing measurements:
[2026-03-13 17:41:06] 2026-03-13 16:40:16,485 | INFO     | . get job = 0 s
[2026-03-13 17:41:06] 2026-03-13 16:40:16,485 | INFO     | . initial setup = 102 s
[2026-03-13 17:41:06] 2026-03-13 16:40:16,485 | INFO     | . payload setup = 125 s
[2026-03-13 17:41:06] 2026-03-13 16:40:16,486 | INFO     | . stage-in = 0 s
[2026-03-13 17:41:06] 2026-03-13 16:40:16,486 | INFO     | . payload execution = 13583 s
[2026-03-13 17:41:06] 2026-03-13 16:40:16,486 | INFO     | . stage-out = 5 s
[2026-03-13 17:41:06] 2026-03-13 16:40:16,486 | INFO     | . log creation = 1 s
[2026-03-13 17:41:06] 2026-03-13 16:40:16,486 | INFO     | ..............................
[2026-03-13 17:41:06] 2026-03-13 16:40:16,672 | INFO     | 
[2026-03-13 17:41:06] 2026-03-13 16:40:16,673 | INFO     | job summary report
[2026-03-13 17:41:06] 2026-03-13 16:40:16,673 | INFO     | --------------------------------------------------
[2026-03-13 17:41:06] 2026-03-13 16:40:16,673 | INFO     | PanDA job id: 7043587155
[2026-03-13 17:41:06] 2026-03-13 16:40:16,673 | INFO     | task id: 48955010
[2026-03-13 17:41:06] 2026-03-13 16:40:16,673 | INFO     | errors: (none)
[2026-03-13 17:41:06] 2026-03-13 16:40:16,673 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 17:41:06] 2026-03-13 16:40:16,673 | INFO     | pilot state: finished 
[2026-03-13 17:41:06] 2026-03-13 16:40:16,673 | INFO     | transexitcode: 0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,673 | INFO     | exeerrorcode: 0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,674 | INFO     | exeerrordiag: 
[2026-03-13 17:41:06] 2026-03-13 16:40:16,674 | INFO     | exitcode: 0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,674 | INFO     | exitmsg: OK
[2026-03-13 17:41:06] 2026-03-13 16:40:16,674 | INFO     | cpuconsumptiontime: 52344 s
[2026-03-13 17:41:06] 2026-03-13 16:40:16,674 | INFO     | nevents: 400
[2026-03-13 17:41:06] 2026-03-13 16:40:16,674 | INFO     | neventsw: 0
[2026-03-13 17:41:06] 2026-03-13 16:40:16,674 | INFO     | pid: 15934
[2026-03-13 17:41:06] 2026-03-13 16:40:16,674 | INFO     | pgrp: 15934
[2026-03-13 17:41:06] 2026-03-13 16:40:16,674 | INFO     | corecount: 8
[2026-03-13 17:41:06] 2026-03-13 16:40:16,674 | INFO     | event service: False
[2026-03-13 17:41:06] 2026-03-13 16:40:16,675 | INFO     | sizes: {0: 2279091, 1: 2279776, 2: 2280237, 13713: 2310411, 13718: 2319409, 13720: 2319787}
[2026-03-13 17:41:06] 2026-03-13 16:40:16,675 | INFO     | --------------------------------------------------
[2026-03-13 17:41:06] 2026-03-13 16:40:16,675 | INFO     | 
[2026-03-13 17:41:06] 2026-03-13 16:40:16,675 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-13 17:41:06] 2026-03-13 16:40:17,024 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,025 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,025 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,025 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,026 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 17:41:06] 2026-03-13 16:40:17,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,027 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 17:41:06] 2026-03-13 16:40:17,027 | INFO     | job 7043587155 has completed (purged errors)
[2026-03-13 17:41:06] 2026-03-13 16:40:17,027 | INFO     | overall cleanup function is called
[2026-03-13 17:41:06] 2026-03-13 16:40:18,036 | INFO     | --- collectZombieJob: --- 10, [15934]
[2026-03-13 17:41:06] 2026-03-13 16:40:18,037 | INFO     | zombie collector waiting for pid 15934
[2026-03-13 17:41:06] 2026-03-13 16:40:18,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 17:41:06] 2026-03-13 16:40:18,037 | INFO     | collected zombie processes
[2026-03-13 17:41:06] 2026-03-13 16:40:18,037 | INFO     | will attempt to kill all subprocesses of pid=15934
[2026-03-13 17:41:06] 2026-03-13 16:40:18,156 | INFO     | process IDs to be killed: [15934] (in reverse order)
[2026-03-13 17:41:06] 2026-03-13 16:40:18,878 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 17:41:06] 2026-03-13 16:40:18,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 17:41:06] 2026-03-13 16:40:18,881 | INFO     | did not find any defunct processes belonging to 15934
[2026-03-13 17:41:06] 2026-03-13 16:40:18,885 | INFO     | did not find any defunct processes belonging to 15934
[2026-03-13 17:41:06] 2026-03-13 16:40:18,885 | INFO     | ready for new job
[2026-03-13 17:41:06] 2026-03-13 16:40:18,885 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 17:41:06] 2026-03-13 16:40:18,887 | INFO     | **************************************
[2026-03-13 17:41:06] 2026-03-13 16:40:18,888 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 17:41:06] 2026-03-13 16:40:18,888 | INFO     | **************************************
[2026-03-13 17:41:06] 2026-03-13 16:40:18,888 | INFO     | 
[2026-03-13 17:41:06] 2026-03-13 16:40:18,903 | INFO     | pilot is running in a VM
[2026-03-13 17:41:06] 2026-03-13 16:40:18,903 | INFO     | architecture information:
[2026-03-13 17:41:06] 2026-03-13 16:40:18,913 | INFO     | executing command: cat /etc/os-release
[2026-03-13 17:41:06] 2026-03-13 16:40:19,166 | INFO     | cat /etc/os-release:
[2026-03-13 17:41:06] NAME="CentOS Linux"
[2026-03-13 17:41:06] VERSION="7 (Core)"
[2026-03-13 17:41:06] ID="centos"
[2026-03-13 17:41:06] ID_LIKE="rhel fedora"
[2026-03-13 17:41:06] VERSION_ID="7"
[2026-03-13 17:41:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 17:41:06] ANSI_COLOR="0;31"
[2026-03-13 17:41:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 17:41:06] HOME_URL="https://www.centos.org/"
[2026-03-13 17:41:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 17:41:06] 
[2026-03-13 17:41:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 17:41:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 17:41:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 17:41:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 17:41:06] 
[2026-03-13 17:41:06] 2026-03-13 16:40:19,166 | INFO     | **************************************
[2026-03-13 17:41:06] 2026-03-13 16:40:19,670 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-13 17:41:06] 2026-03-13 16:40:19,926 | INFO     | sufficient remaining disk space (496527998976 B)
[2026-03-13 17:41:06] 2026-03-13 16:40:19,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 17:41:06] 2026-03-13 16:40:19,927 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 17:41:06] 2026-03-13 16:40:19,927 | INFO     | update_server=False
[2026-03-13 17:41:06] 2026-03-13 16:40:19,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 17:41:06] 2026-03-13 16:40:19,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 17:41:06] 2026-03-13 16:40:19,928 | INFO     | aborting loop
[2026-03-13 17:41:06] 2026-03-13 16:40:19,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 17:41:06] 2026-03-13 16:40:20,432 | INFO     | all payload control threads have been joined
[2026-03-13 17:41:06] 2026-03-13 16:40:20,839 | INFO     | all data control threads have been joined
[2026-03-13 17:41:06] 2026-03-13 16:40:20,934 | INFO     | [job] retrieve thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:20,934 | INFO     | [job] job monitor thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:20,995 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:21,164 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:21,167 | INFO     | [data] copytool_in thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:21,272 | INFO     | all job control threads have been joined
[2026-03-13 17:41:06] 2026-03-13 16:40:21,438 | INFO     | [payload] control thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:21,544 | INFO     | [payload] validate_post thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:21,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 17:41:06] 2026-03-13 16:40:21,666 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:21,845 | INFO     | [data] control thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:21,981 | INFO     | [data] copytool_out thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:22,051 | INFO     | [payload] failed_post thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:22,061 | INFO     | [job] validate thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:22,270 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:22,278 | INFO     | [job] control thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:22,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 17:41:06] 2026-03-13 16:40:22,624 | INFO     | [job] queue monitor thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:26,472 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 17:41:06] 2026-03-13 16:40:49,252 | INFO     | PID=11461 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 17:41:06] 2026-03-13 16:40:49,252 | INFO     | .. there are 9 such processes running
[2026-03-13 17:41:06] 2026-03-13 16:40:49,252 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 17:41:06] 2026-03-13 16:40:49,252 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 17:41:06] 2026-03-13 16:40:49,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 17:41:06] 2026-03-13 16:40:58,021 | INFO     | [monitor] cgroup control has ended
[2026-03-13 17:41:06] 2026-03-13 16:40:59,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870148810560)>', '<ExcThread(monitor, started 139869854603008)>']
[2026-03-13 17:41:06] 2026-03-13 16:40:59,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 17:41:06] 2026-03-13 16:40:59,313 | INFO     | [monitor] control thread has ended
[2026-03-13 17:41:06] 2026-03-13 16:41:04,054 | INFO     | all workflow threads have been joined
[2026-03-13 17:41:06] 2026-03-13 16:41:04,055 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 17:41:06] 2026-03-13 16:41:04,055 | INFO     | traces error code: 0
[2026-03-13 17:41:06] 2026-03-13 16:41:04,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 17:41:06] 2026-03-13 16:41:04,401 [wrapper] ==== pilot stdout END ====
[2026-03-13 17:41:06] 2026-03-13 16:41:04,525 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 17:41:06] 2026-03-13 16:41:04,617 [wrapper] pilotpid: 11461
[2026-03-13 17:41:06] 2026-03-13 16:41:04,704 [wrapper] Pilot exit status: 0
[2026-03-13 17:41:06] 2026-03-13 16:41:05,217 [wrapper] pandaids: 7043587155
[2026-03-13 17:41:06] 2026-03-13 16:41:05,853 [wrapper] cleanup supervisor_pilot 23463 11462
[2026-03-13 17:41:06] 2026-03-13 16:41:05,859 [wrapper] Test setup, not cleaning
[2026-03-13 17:41:06] 2026-03-13 16:41:05,955 [wrapper] apfmon messages muted
[2026-03-13 17:41:06] 2026-03-13 16:41:06,088 [wrapper] ==== wrapper stdout END ====
[2026-03-13 17:41:06] 2026-03-13 16:41:06,098 [wrapper] ==== wrapper stderr END ====
[2026-03-13 17:41:06]  *** Error codes and diagnostics ***
[2026-03-13 17:41:06]     "exeErrorCode": 0,
[2026-03-13 17:41:06]     "exeErrorDiag": "",
[2026-03-13 17:41:06]     "pilotErrorCode": 0,
[2026-03-13 17:41:06]     "pilotErrorDiag": "",
[2026-03-13 17:41:06]  *** Listing of results directory ***
[2026-03-13 17:41:06] total 621984
[2026-03-13 17:41:06] -rwx------. 1 boinc boinc     36322 Mar 12 22:11 runpilot2-wrapper.sh
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc      5111 Mar 12 22:12 queuedata.json
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc    585013 Mar 12 22:12 pilot3.tar.gz
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc       100 Mar 13 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 17:41:06] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 13:46 run_atlas
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc       105 Mar 13 13:46 job.xml
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc      6390 Mar 13 13:46 init_data.xml
[2026-03-13 17:41:06] -rw-r--r--. 2 boinc boinc 441160052 Mar 13 13:46 EVNT.46701403._001506.pool.root.1
[2026-03-13 17:41:06] -rw-r--r--. 2 boinc boinc     15845 Mar 13 13:46 start_atlas.sh
[2026-03-13 17:41:06] drwxrwx--x. 2 boinc boinc        68 Mar 13 13:46 shared
[2026-03-13 17:41:06] -rw-r--r--. 2 boinc boinc    597526 Mar 13 13:46 input.tar.gz
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc         0 Mar 13 13:46 boinc_lockfile
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc      2564 Mar 13 13:46 pandaJob.out
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc       415 Mar 13 13:51 workernode_map.json
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc   1006473 Mar 13 13:51 agis_schedconf.cvmfs.json
[2026-03-13 17:41:06] drwx------. 5 boinc boinc      4096 Mar 13 13:51 pilot3
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc 186995489 Mar 13 17:38 HITS.48955010._025625.pool.root.1
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc       532 Mar 13 17:39 boinc_task_state.xml
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc      1011 Mar 13 17:40 memory_monitor_summary.json
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc   1511579 Mar 13 17:40 agis_ddmendpoints.agis.ALL.json
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc    491511 Mar 13 17:40 log.48955010._025625.job.log.tgz.1
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc        95 Mar 13 17:40 pilot_heartbeat.json
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc      6320 Mar 13 17:40 heartbeat.json
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc      8192 Mar 13 17:40 boinc_mmap_file
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc        28 Mar 13 17:40 wrapper_checkpoint.txt
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc      4880 Mar 13 17:41 pilotlog.txt
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc   1923889 Mar 13 17:41 log.48955010._025625.job.log.1
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc       357 Mar 13 17:41 output.list
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc       620 Mar 13 17:41 runtime_log
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc   2437120 Mar 13 17:41 result.tar.gz
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc      8816 Mar 13 17:41 runtime_log.err
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc       655 Mar 13 17:41 mbDODm6U2K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmdqnLDmG0swOm.diag
[2026-03-13 17:41:06] -rw-r--r--. 1 boinc boinc     20901 Mar 13 17:41 stderr.txt
[2026-03-13 17:41:06] HITS file was successfully produced:
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc 186995489 Mar 13 17:38 shared/HITS.pool.root.1
[2026-03-13 17:41:06]  *** Contents of shared directory: ***
[2026-03-13 17:41:06] total 616420
[2026-03-13 17:41:06] -rw-r--r--. 2 boinc boinc 441160052 Mar 13 13:46 ATLAS.root_0
[2026-03-13 17:41:06] -rw-r--r--. 2 boinc boinc     15845 Mar 13 13:46 start_atlas.sh
[2026-03-13 17:41:06] -rw-r--r--. 2 boinc boinc    597526 Mar 13 13:46 input.tar.gz
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc 186995489 Mar 13 17:38 HITS.pool.root.1
[2026-03-13 17:41:06] -rw-------. 1 boinc boinc   2437120 Mar 13 17:41 result.tar.gz
17:41:08 (7338): run_atlas exited; CPU time 52549.010956
17:41:08 (7338): called boinc_finish(0)

</stderr_txt>
]]>

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