Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:23:16 (27895): wrapper (7.7.26015): starting
13:23:16 (27895): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 13:23:16] Arguments: --nthreads 8
[2026-03-13 13:23:16] Threads: 8
[2026-03-13 13:23:16] Checking for CVMFS
[2026-03-13 13:23:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 13:23:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 13:23:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 13:23:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 13:23:20] 2.11.2.0 20422 126129 137136 157240 1 53 23269563 25165824 4457 130560 162 28166896 99.795 26029049 901 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 13:23:20] CVMFS is ok
[2026-03-13 13:23:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 13:23:20] Checking for apptainer binary...
[2026-03-13 13:23:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 13:23:20] Running /usr/bin/apptainer --version
[2026-03-13 13:23:21] apptainer version 1.3.2-1.el7
[2026-03-13 13:23:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 13:23:26] cg-vwn357.simple-grid.lan
[2026-03-13 13:23:26] apptainer works
[2026-03-13 13:23:26] Set ATHENA_PROC_NUMBER=8
[2026-03-13 13:23:26] Set ATHENA_CORE_NUMBER=8
[2026-03-13 13:23:26] Starting ATLAS job with PandaID=7043586527
[2026-03-13 13:23:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 17:18:33]  *** The last 200 lines of the pilot log: ***
[2026-03-13 17:18:33] 2026-03-13 16:17:34,761 | INFO     | chi2: 2.7338396812908883
[2026-03-13 17:18:33] 2026-03-13 16:17:34,762 | INFO     | sum of square deviations: 3124858590.0
[2026-03-13 17:18:33] 2026-03-13 16:17:34,763 | INFO     | sum of deviations: -9384087469.499989
[2026-03-13 17:18:33] 2026-03-13 16:17:34,763 | INFO     | mean x: 1773411763.5
[2026-03-13 17:18:33] 2026-03-13 16:17:34,764 | INFO     | mean y: 2518716.337962963
[2026-03-13 17:18:33] 2026-03-13 16:17:34,764 | INFO     | intersect: 5328152062.237377
[2026-03-13 17:18:33] 2026-03-13 16:17:34,764 | INFO     | chi2: 1.8993349558978296
[2026-03-13 17:18:33] 2026-03-13 16:17:34,764 | INFO     | current chi2=1.8993349558978296 (change=30.52500595056894 %)
[2026-03-13 17:18:33] 2026-03-13 16:17:34,765 | INFO     | sum of square deviations: 2912836010.0
[2026-03-13 17:18:33] 2026-03-13 16:17:34,766 | INFO     | sum of deviations: -8819336385.0
[2026-03-13 17:18:33] 2026-03-13 16:17:34,766 | INFO     | mean x: 1773411611.0
[2026-03-13 17:18:33] 2026-03-13 16:17:34,767 | INFO     | mean y: 2519122.654028436
[2026-03-13 17:18:33] 2026-03-13 16:17:34,767 | INFO     | intersect: 5371964396.187902
[2026-03-13 17:18:33] 2026-03-13 16:17:34,767 | INFO     | chi2: 1.8991808581753593
[2026-03-13 17:18:33] 2026-03-13 16:17:34,767 | INFO     | current chi2=1.8991808581753593 (change=0.008113246270323202 %)
[2026-03-13 17:18:33] 2026-03-13 16:17:34,767 | INFO     | right removable region: 210
[2026-03-13 17:18:33] 2026-03-13 16:17:34,768 | INFO     | sum of square deviations: 3124858590.0
[2026-03-13 17:18:33] 2026-03-13 16:17:34,769 | INFO     | sum of deviations: -63956814081.999985
[2026-03-13 17:18:33] 2026-03-13 16:17:34,770 | INFO     | mean x: 1773412068.5
[2026-03-13 17:18:33] 2026-03-13 16:17:34,770 | INFO     | mean y: 2534099.287037037
[2026-03-13 17:18:33] 2026-03-13 16:17:34,770 | INFO     | intersect: 36299148070.49062
[2026-03-13 17:18:33] 2026-03-13 16:17:34,770 | INFO     | chi2: 1.0468845137974914
[2026-03-13 17:18:33] 2026-03-13 16:17:34,770 | INFO     | current chi2=1.0468845137974914 (change=61.706440909396555 %)
[2026-03-13 17:18:33] 2026-03-13 16:17:34,771 | INFO     | sum of square deviations: 2912836010.0
[2026-03-13 17:18:33] 2026-03-13 16:17:34,772 | INFO     | sum of deviations: -60337142951.00001
[2026-03-13 17:18:33] 2026-03-13 16:17:34,773 | INFO     | mean x: 1773412221.0
[2026-03-13 17:18:33] 2026-03-13 16:17:34,773 | INFO     | mean y: 2531467.4549763035
[2026-03-13 17:18:33] 2026-03-13 16:17:34,773 | INFO     | intersect: 36737392723.69419
[2026-03-13 17:18:33] 2026-03-13 16:17:34,773 | INFO     | chi2: 1.0376356843753494
[2026-03-13 17:18:33] 2026-03-13 16:17:34,773 | INFO     | current chi2=1.0376356843753494 (change=0.8834622444258536 %)
[2026-03-13 17:18:33] 2026-03-13 16:17:34,773 | INFO     | left removable region: 20
[2026-03-13 17:18:33] 2026-03-13 16:17:34,774 | INFO     | sum of square deviations: 2126802667.5
[2026-03-13 17:18:33] 2026-03-13 16:17:34,775 | INFO     | sum of deviations: -30579593654.0
[2026-03-13 17:18:33] 2026-03-13 16:17:34,775 | INFO     | mean x: 1773412190.5
[2026-03-13 17:18:33] 2026-03-13 16:17:34,775 | INFO     | mean y: 2534222.7684210525
[2026-03-13 17:18:33] 2026-03-13 16:17:34,776 | INFO     | intersect: 25501008996.77565
[2026-03-13 17:18:33] 2026-03-13 16:17:34,776 | INFO     | chi2: 0.15289683964688502
[2026-03-13 17:18:33] 2026-03-13 16:17:34,776 | INFO     | current memory leak: -14.38 B/s (using 190 data points, chi2=0.15)
[2026-03-13 17:18:33] 2026-03-13 16:17:34,777 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-13 17:18:33] 2026-03-13 16:17:34,777 | INFO     | ..............................
[2026-03-13 17:18:33] 2026-03-13 16:17:34,777 | INFO     | . Timing measurements:
[2026-03-13 17:18:33] 2026-03-13 16:17:34,777 | INFO     | . get job = 0 s
[2026-03-13 17:18:33] 2026-03-13 16:17:34,777 | INFO     | . initial setup = 98 s
[2026-03-13 17:18:33] 2026-03-13 16:17:34,777 | INFO     | . payload setup = 136 s
[2026-03-13 17:18:33] 2026-03-13 16:17:34,777 | INFO     | . stage-in = 0 s
[2026-03-13 17:18:33] 2026-03-13 16:17:34,777 | INFO     | . payload execution = 13567 s
[2026-03-13 17:18:33] 2026-03-13 16:17:34,778 | INFO     | . stage-out = 3 s
[2026-03-13 17:18:33] 2026-03-13 16:17:34,778 | INFO     | . log creation = 1 s
[2026-03-13 17:18:33] 2026-03-13 16:17:34,778 | INFO     | ..............................
[2026-03-13 17:18:33] 2026-03-13 16:17:34,847 | WARNING  | process 4165 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 17:18:33] 2026-03-13 16:17:34,848 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-7043586527/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 17:18:33] 2026-03-13 16:17:34,849 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3098548 B
[2026-03-13 17:18:33] 2026-03-13 16:17:34,849 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15596 B
[2026-03-13 17:18:33] 2026-03-13 16:17:34,849 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2026-03-13 17:18:33] 2026-03-13 16:17:34,941 | INFO     | 
[2026-03-13 17:18:33] 2026-03-13 16:17:34,942 | INFO     | job summary report
[2026-03-13 17:18:33] 2026-03-13 16:17:34,942 | INFO     | --------------------------------------------------
[2026-03-13 17:18:33] 2026-03-13 16:17:34,942 | INFO     | PanDA job id: 7043586527
[2026-03-13 17:18:33] 2026-03-13 16:17:34,942 | INFO     | task id: 48955006
[2026-03-13 17:18:33] 2026-03-13 16:17:34,942 | INFO     | errors: (none)
[2026-03-13 17:18:33] 2026-03-13 16:17:34,943 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 17:18:33] 2026-03-13 16:17:34,943 | INFO     | pilot state: finished 
[2026-03-13 17:18:33] 2026-03-13 16:17:34,943 | INFO     | transexitcode: 0
[2026-03-13 17:18:33] 2026-03-13 16:17:34,943 | INFO     | exeerrorcode: 0
[2026-03-13 17:18:33] 2026-03-13 16:17:34,943 | INFO     | exeerrordiag: 
[2026-03-13 17:18:33] 2026-03-13 16:17:34,943 | INFO     | exitcode: 0
[2026-03-13 17:18:33] 2026-03-13 16:17:34,943 | INFO     | exitmsg: OK
[2026-03-13 17:18:33] 2026-03-13 16:17:34,943 | INFO     | cpuconsumptiontime: 52849 s
[2026-03-13 17:18:33] 2026-03-13 16:17:34,943 | INFO     | nevents: 400
[2026-03-13 17:18:33] 2026-03-13 16:17:34,943 | INFO     | neventsw: 0
[2026-03-13 17:18:33] 2026-03-13 16:17:34,944 | INFO     | pid: 4165
[2026-03-13 17:18:33] 2026-03-13 16:17:34,944 | INFO     | pgrp: 4165
[2026-03-13 17:18:33] 2026-03-13 16:17:34,944 | INFO     | corecount: 8
[2026-03-13 17:18:33] 2026-03-13 16:17:34,944 | INFO     | event service: False
[2026-03-13 17:18:33] 2026-03-13 16:17:34,944 | INFO     | sizes: {0: 2279140, 1: 2280199, 2: 2280287, 13708: 2310540, 13711: 2319596, 13713: 2319734}
[2026-03-13 17:18:33] 2026-03-13 16:17:34,944 | INFO     | --------------------------------------------------
[2026-03-13 17:18:33] 2026-03-13 16:17:34,944 | INFO     | 
[2026-03-13 17:18:33] 2026-03-13 16:17:34,945 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2026-03-13 17:18:33] 2026-03-13 16:17:35,182 | INFO     | sufficient remaining disk space (495281242112 B)
[2026-03-13 17:18:33] 2026-03-13 16:17:35,182 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-13 17:18:33] 2026-03-13 16:17:35,183 | INFO     | size of work directory /var/lib/boinc/slots/20/PanDA_Pilot-7043586527: 3515181 B (within 5033164800 B limit)
[2026-03-13 17:18:33] 2026-03-13 16:17:35,184 | INFO     | pfn file=/var/lib/boinc/slots/20/PanDA_Pilot-7043586527/HITS.48955006._048277.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-13 17:18:33] 2026-03-13 16:17:35,184 | INFO     | total size of present files: 0 B (workdir size: 3515181 B)
[2026-03-13 17:18:33] 2026-03-13 16:17:35,184 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/20/PanDA_Pilot-7043586527/HITS.48955006._048277.pool.root.1 since it does not exist
[2026-03-13 17:18:33] 2026-03-13 16:17:35,404 | INFO     | number of running child processes to parent process 4165: 1
[2026-03-13 17:18:33] 2026-03-13 16:17:35,405 | INFO     | maximum number of monitored processes: 7
[2026-03-13 17:18:33] 2026-03-13 16:17:35,405 | INFO     | aborting job monitoring since job object (job id=7043586527) has expired
[2026-03-13 17:18:33] 2026-03-13 16:17:35,647 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,648 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,648 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,648 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,648 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,648 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,648 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,649 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,649 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,649 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,649 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,650 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 17:18:33] 2026-03-13 16:17:35,650 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,650 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 17:18:33] 2026-03-13 16:17:35,650 | INFO     | job 7043586527 has completed (purged errors)
[2026-03-13 17:18:33] 2026-03-13 16:17:35,650 | INFO     | overall cleanup function is called
[2026-03-13 17:18:33] 2026-03-13 16:17:36,658 | INFO     | --- collectZombieJob: --- 10, [4165]
[2026-03-13 17:18:33] 2026-03-13 16:17:36,659 | INFO     | zombie collector waiting for pid 4165
[2026-03-13 17:18:33] 2026-03-13 16:17:36,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 17:18:33] 2026-03-13 16:17:36,659 | INFO     | collected zombie processes
[2026-03-13 17:18:33] 2026-03-13 16:17:36,659 | INFO     | will attempt to kill all subprocesses of pid=4165
[2026-03-13 17:18:33] 2026-03-13 16:17:36,760 | INFO     | process IDs to be killed: [4165] (in reverse order)
[2026-03-13 17:18:33] 2026-03-13 16:17:37,549 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 17:18:33] 2026-03-13 16:17:37,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 17:18:33] 2026-03-13 16:17:37,553 | INFO     | did not find any defunct processes belonging to 4165
[2026-03-13 17:18:33] 2026-03-13 16:17:37,556 | INFO     | did not find any defunct processes belonging to 4165
[2026-03-13 17:18:33] 2026-03-13 16:17:37,556 | INFO     | ready for new job
[2026-03-13 17:18:33] 2026-03-13 16:17:37,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 17:18:33] 2026-03-13 16:17:37,558 | INFO     | **************************************
[2026-03-13 17:18:33] 2026-03-13 16:17:37,558 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 17:18:33] 2026-03-13 16:17:37,559 | INFO     | **************************************
[2026-03-13 17:18:33] 2026-03-13 16:17:37,559 | INFO     | 
[2026-03-13 17:18:33] 2026-03-13 16:17:37,559 | INFO     | pilot is running in a VM
[2026-03-13 17:18:33] 2026-03-13 16:17:37,560 | INFO     | architecture information:
[2026-03-13 17:18:33] 2026-03-13 16:17:37,560 | INFO     | executing command: cat /etc/os-release
[2026-03-13 17:18:33] 2026-03-13 16:17:37,910 | INFO     | cat /etc/os-release:
[2026-03-13 17:18:33] NAME="CentOS Linux"
[2026-03-13 17:18:33] VERSION="7 (Core)"
[2026-03-13 17:18:33] ID="centos"
[2026-03-13 17:18:33] ID_LIKE="rhel fedora"
[2026-03-13 17:18:33] VERSION_ID="7"
[2026-03-13 17:18:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 17:18:33] ANSI_COLOR="0;31"
[2026-03-13 17:18:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 17:18:33] HOME_URL="https://www.centos.org/"
[2026-03-13 17:18:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 17:18:33] 
[2026-03-13 17:18:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 17:18:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 17:18:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 17:18:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 17:18:33] 
[2026-03-13 17:18:33] 2026-03-13 16:17:37,910 | INFO     | **************************************
[2026-03-13 17:18:33] 2026-03-13 16:17:38,414 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2026-03-13 17:18:33] 2026-03-13 16:17:38,644 | INFO     | sufficient remaining disk space (495287533568 B)
[2026-03-13 17:18:33] 2026-03-13 16:17:38,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 17:18:33] 2026-03-13 16:17:38,645 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 17:18:33] 2026-03-13 16:17:38,645 | INFO     | update_server=False
[2026-03-13 17:18:33] 2026-03-13 16:17:38,645 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 17:18:33] 2026-03-13 16:17:38,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 17:18:33] 2026-03-13 16:17:38,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 17:18:33] 2026-03-13 16:17:38,915 | INFO     | aborting loop
[2026-03-13 17:18:33] 2026-03-13 16:17:39,466 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 17:18:33] 2026-03-13 16:17:39,555 | INFO     | all data control threads have been joined
[2026-03-13 17:18:33] 2026-03-13 16:17:39,652 | INFO     | [job] retrieve thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:39,740 | INFO     | all payload control threads have been joined
[2026-03-13 17:18:33] 2026-03-13 16:17:39,795 | INFO     | [payload] failed_post thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:39,921 | INFO     | [job] job monitor thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:39,936 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:39,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 17:18:33] 2026-03-13 16:17:40,242 | INFO     | all job control threads have been joined
[2026-03-13 17:18:33] 2026-03-13 16:17:40,479 | INFO     | [data] copytool_in thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:40,561 | INFO     | [data] control thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:40,706 | INFO     | [payload] validate_post thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:40,727 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:40,746 | INFO     | [payload] control thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:40,821 | INFO     | [data] copytool_out thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:40,964 | INFO     | [job] queue monitor thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:40,989 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:41,011 | INFO     | [job] validate thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:41,248 | INFO     | [job] control thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:43,475 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:17:49,432 | INFO     | job.realtimelogging is not enabled
[2026-03-13 17:18:33] 2026-03-13 16:17:50,438 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 17:18:33] 2026-03-13 16:18:07,318 | INFO     | PID=32048 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 17:18:33] 2026-03-13 16:18:07,318 | INFO     | .. there are 9 such processes running
[2026-03-13 17:18:33] 2026-03-13 16:18:07,318 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 17:18:33] 2026-03-13 16:18:07,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 17:18:33] 2026-03-13 16:18:07,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 17:18:33] 2026-03-13 16:18:22,534 | INFO     | [monitor] cgroup control has ended
[2026-03-13 17:18:33] 2026-03-13 16:18:23,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140305789392704)>', '<ExcThread(monitor, started 140304829114112)>']
[2026-03-13 17:18:33] 2026-03-13 16:18:24,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 17:18:33] 2026-03-13 16:18:24,421 | INFO     | [monitor] control thread has ended
[2026-03-13 17:18:33] 2026-03-13 16:18:28,951 | INFO     | all workflow threads have been joined
[2026-03-13 17:18:33] 2026-03-13 16:18:28,952 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 17:18:33] 2026-03-13 16:18:28,952 | INFO     | traces error code: 0
[2026-03-13 17:18:33] 2026-03-13 16:18:28,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 17:18:33] 2026-03-13 16:18:29,165 [wrapper] ==== pilot stdout END ====
[2026-03-13 17:18:33] 2026-03-13 16:18:29,213 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 17:18:33] 2026-03-13 16:18:29,234 [wrapper] pilotpid: 32048
[2026-03-13 17:18:33] 2026-03-13 16:18:29,288 [wrapper] Pilot exit status: 0
[2026-03-13 17:18:33] 2026-03-13 16:18:29,727 [wrapper] pandaids: 7043586527
[2026-03-13 17:18:33] 2026-03-13 16:18:30,558 [wrapper] cleanup supervisor_pilot 26763 32049
[2026-03-13 17:18:33] 2026-03-13 16:18:30,594 [wrapper] Test setup, not cleaning
[2026-03-13 17:18:33] 2026-03-13 16:18:30,684 [wrapper] apfmon messages muted
[2026-03-13 17:18:33] 2026-03-13 16:18:30,742 [wrapper] ==== wrapper stdout END ====
[2026-03-13 17:18:33] 2026-03-13 16:18:30,802 [wrapper] ==== wrapper stderr END ====
[2026-03-13 17:18:33]  *** Error codes and diagnostics ***
[2026-03-13 17:18:33]     "exeErrorCode": 0,
[2026-03-13 17:18:33]     "exeErrorDiag": "",
[2026-03-13 17:18:33]     "pilotErrorCode": 0,
[2026-03-13 17:18:33]     "pilotErrorDiag": "",
[2026-03-13 17:18:33]  *** Listing of results directory ***
[2026-03-13 17:18:33] total 622616
[2026-03-13 17:18:33] -rwx------. 1 boinc boinc     36322 Mar 12 22:11 runpilot2-wrapper.sh
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc      5111 Mar 12 22:12 queuedata.json
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc    585013 Mar 12 22:12 pilot3.tar.gz
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc       100 Mar 13 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 17:18:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 13:23 run_atlas
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc       105 Mar 13 13:23 job.xml
[2026-03-13 17:18:33] -rw-r--r--. 2 boinc boinc 445256160 Mar 13 13:23 EVNT.46701403._000956.pool.root.1
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc      6392 Mar 13 13:23 init_data.xml
[2026-03-13 17:18:33] -rw-r--r--. 2 boinc boinc     15845 Mar 13 13:23 start_atlas.sh
[2026-03-13 17:18:33] drwxrwx--x. 2 boinc boinc        68 Mar 13 13:23 shared
[2026-03-13 17:18:33] -rw-r--r--. 2 boinc boinc    597529 Mar 13 13:23 input.tar.gz
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc         0 Mar 13 13:23 boinc_lockfile
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc      2564 Mar 13 13:23 pandaJob.out
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc       415 Mar 13 13:28 workernode_map.json
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc   1006473 Mar 13 13:28 agis_schedconf.cvmfs.json
[2026-03-13 17:18:33] drwx------. 5 boinc boinc      4096 Mar 13 13:29 pilot3
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc 183666343 Mar 13 17:16 HITS.48955006._048277.pool.root.1
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc       532 Mar 13 17:16 boinc_task_state.xml
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc      1013 Mar 13 17:17 memory_monitor_summary.json
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc        95 Mar 13 17:17 pilot_heartbeat.json
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc   1511579 Mar 13 17:17 agis_ddmendpoints.agis.ALL.json
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc    445554 Mar 13 17:17 log.48955006._048277.job.log.tgz.1
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc      6317 Mar 13 17:17 heartbeat.json
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc      8192 Mar 13 17:18 boinc_mmap_file
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc        28 Mar 13 17:18 wrapper_checkpoint.txt
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc      4953 Mar 13 17:18 pilotlog.txt
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc   1909440 Mar 13 17:18 log.48955006._048277.job.log.1
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc       357 Mar 13 17:18 output.list
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc       620 Mar 13 17:18 runtime_log
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc   2375680 Mar 13 17:18 result.tar.gz
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc      8832 Mar 13 17:18 runtime_log.err
[2026-03-13 17:18:33] -rw-------. 1 boinc boinc       655 Mar 13 17:18 3hTLDmvU2K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZJlLDm0hf2zn.diag
[2026-03-13 17:18:33] -rw-r--r--. 1 boinc boinc     21247 Mar 13 17:18 stderr.txt
[2026-03-13 17:18:34] HITS file was successfully produced:
[2026-03-13 17:18:34] -rw-------. 1 boinc boinc 183666343 Mar 13 17:16 shared/HITS.pool.root.1
[2026-03-13 17:18:34]  *** Contents of shared directory: ***
[2026-03-13 17:18:34] total 617108
[2026-03-13 17:18:34] -rw-r--r--. 2 boinc boinc 445256160 Mar 13 13:23 ATLAS.root_0
[2026-03-13 17:18:34] -rw-r--r--. 2 boinc boinc     15845 Mar 13 13:23 start_atlas.sh
[2026-03-13 17:18:34] -rw-r--r--. 2 boinc boinc    597529 Mar 13 13:23 input.tar.gz
[2026-03-13 17:18:34] -rw-------. 1 boinc boinc 183666343 Mar 13 17:16 HITS.pool.root.1
[2026-03-13 17:18:34] -rw-------. 1 boinc boinc   2375680 Mar 13 17:18 result.tar.gz
17:18:35 (27895): run_atlas exited; CPU time 53060.431520
17:18:35 (27895): called boinc_finish(0)

</stderr_txt>
]]>

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