Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:46:16 (3738332): wrapper (7.7.26015): starting
16:46:16 (3738332): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 16:46:16] Arguments: --nthreads 4
[2026-03-14 16:46:16] Threads: 4
[2026-03-14 16:46:16] Checking for CVMFS
[2026-03-14 16:46:16] No cvmfs_config command found, will try listing directly
[2026-03-14 16:46:16] CVMFS is ok
[2026-03-14 16:46:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 16:46:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 16:46:16] Further information can be found at the LHC@home message board.
[2026-03-14 16:46:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 16:46:16] Checking for apptainer binary...
[2026-03-14 16:46:16] which: no apptainer in ((null))
[2026-03-14 16:46:16] apptainer is not installed, using version from CVMFS
[2026-03-14 16:46:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 16:46:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot164/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-14 16:46:17] apptainer works
[2026-03-14 16:46:17] Set ATHENA_PROC_NUMBER=4
[2026-03-14 16:46:17] Set ATHENA_CORE_NUMBER=4
[2026-03-14 16:46:17] Starting ATLAS job with PandaID=7052862469
[2026-03-14 16:46:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot164/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 18:23:47]  *** The last 200 lines of the pilot log: ***
[2026-03-14 18:23:47]  guid=f8404a88-fc2d-4116-a582-7aa9a59f2ca2
[2026-03-14 18:23:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 18:23:47]  is_altstaged=None
[2026-03-14 18:23:47]  is_tar=False
[2026-03-14 18:23:47]  lfn=log.48967085._017220.job.log.tgz.1
[2026-03-14 18:23:47]  mtime=0
[2026-03-14 18:23:47]  protocol_id=None
[2026-03-14 18:23:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 18:23:47]  replicas=None
[2026-03-14 18:23:47]  scope=mc23_13p6TeV
[2026-03-14 18:23:47]  status=None
[2026-03-14 18:23:47]  status_code=0
[2026-03-14 18:23:47]  storage_token=
[2026-03-14 18:23:47]  surl=/var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7052862469/log.48967085._017220.job.log.tgz.1
[2026-03-14 18:23:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/0f/log.48967085._017220.job.log.tgz.1
[2026-03-14 18:23:47]  workdir=None
[2026-03-14 18:23:47] ]
[2026-03-14 18:23:47] 2026-03-14 17:22:54,004 | INFO     | transferring file log.48967085._017220.job.log.tgz.1 from /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7052862469/log.48967085._017220.job.log.tgz.1 to /var/lib/
[2026-03-14 18:23:47] 2026-03-14 17:22:54,005 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7052862469/log.48967085._017220.job.log.tgz.1 /var/lib/boinc/var/slot164/slots/0/
[2026-03-14 18:23:47] 2026-03-14 17:22:54,018 | INFO     | adding to output.list: log.48967085._017220.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/0f/log.48967085._017220.job.log.tg
[2026-03-14 18:23:47] 2026-03-14 17:22:54,019 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 18:23:47] 2026-03-14 17:22:54,019 | INFO     | summary of transferred files:
[2026-03-14 18:23:47] 2026-03-14 17:22:54,019 | INFO     |  -- lfn=log.48967085._017220.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 18:23:47] 2026-03-14 17:22:54,019 | INFO     | stage-out finished correctly
[2026-03-14 18:23:47] 2026-03-14 17:22:55,063 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 18:23:47] 2026-03-14 17:22:55,791 | INFO     | time since job start (5784s) is within the limit (345600.0s)
[2026-03-14 18:23:47] 2026-03-14 17:22:56,096 | INFO     | monitor loop #417: job 0:7052862469 is in state 'finished'
[2026-03-14 18:23:47] 2026-03-14 17:22:56,096 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 18:23:47] 2026-03-14 17:22:57,748 | INFO     | job 7052862469 has state=finished
[2026-03-14 18:23:47] 2026-03-14 17:22:57,748 | INFO     | preparing for final server update for job 7052862469 in state='finished'
[2026-03-14 18:23:47] 2026-03-14 17:22:57,751 | INFO     | reading metadata from: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7052862469/jobReport.json
[2026-03-14 18:23:47] 2026-03-14 17:22:57,754 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot164/slots/0/workernode_map.json
[2026-03-14 18:23:47] 2026-03-14 17:22:57,754 | INFO     | this job has now completed (state=finished)
[2026-03-14 18:23:47] 2026-03-14 17:22:57,754 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 18:23:47] 2026-03-14 17:22:57,754 | INFO     | log transfer has been attempted: DONE
[2026-03-14 18:23:47] 2026-03-14 17:22:57,754 | INFO     | job 7052862469 has finished - writing final server update
[2026-03-14 18:23:47] 2026-03-14 17:22:57,754 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2833472/.job.ad'
[2026-03-14 18:23:47] 2026-03-14 17:22:57,754 | INFO     | total number of processed events: 400 (read)
[2026-03-14 18:23:47] 2026-03-14 17:22:57,772 | INFO     | using path: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7052862469/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 18:23:47] 2026-03-14 17:22:57,772 | INFO     | extracted standard info from prmon json
[2026-03-14 18:23:47] 2026-03-14 17:22:57,772 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 18:23:47] 2026-03-14 17:22:57,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 18:23:47] 2026-03-14 17:22:57,773 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 18:23:47] 2026-03-14 17:22:57,773 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 18:23:47] 2026-03-14 17:22:57,774 | INFO     | fitting pss+swap vs Time
[2026-03-14 18:23:47] 2026-03-14 17:22:57,774 | INFO     | sum of square deviations: 211285822.0
[2026-03-14 18:23:47] 2026-03-14 17:22:57,774 | INFO     | sum of deviations: -222261918.00000003
[2026-03-14 18:23:47] 2026-03-14 17:22:57,774 | INFO     | mean x: 1773506171.5
[2026-03-14 18:23:47] 2026-03-14 17:22:57,774 | INFO     | mean y: 2328814.227272727
[2026-03-14 18:23:47] 2026-03-14 17:22:57,774 | INFO     | intersect: 1867966931.9729445
[2026-03-14 18:23:47] 2026-03-14 17:22:57,774 | INFO     | chi2: 0.0006808900882550704
[2026-03-14 18:23:47] 2026-03-14 17:22:57,774 | INFO     | current memory leak: -1.05 B/s (using 88 data points, chi2=0.00)
[2026-03-14 18:23:47] 2026-03-14 17:22:57,775 | INFO     | could have reported an average CPU frequency of 3571 MHz (7 samples)
[2026-03-14 18:23:47] 2026-03-14 17:22:57,775 | INFO     | ..............................
[2026-03-14 18:23:47] 2026-03-14 17:22:57,775 | INFO     | . Timing measurements:
[2026-03-14 18:23:47] 2026-03-14 17:22:57,775 | INFO     | . get job = 0 s
[2026-03-14 18:23:47] 2026-03-14 17:22:57,775 | INFO     | . initial setup = 5 s
[2026-03-14 18:23:47] 2026-03-14 17:22:57,775 | INFO     | . payload setup = 5 s
[2026-03-14 18:23:47] 2026-03-14 17:22:57,775 | INFO     | . stage-in = 0 s
[2026-03-14 18:23:47] 2026-03-14 17:22:57,775 | INFO     | . payload execution = 5761 s
[2026-03-14 18:23:47] 2026-03-14 17:22:57,775 | INFO     | . stage-out = 0 s
[2026-03-14 18:23:47] 2026-03-14 17:22:57,775 | INFO     | . log creation = 0 s
[2026-03-14 18:23:47] 2026-03-14 17:22:57,775 | INFO     | ..............................
[2026-03-14 18:23:47] 2026-03-14 17:22:57,801 | INFO     | time since job start (5786s) is within the limit (345600.0s)
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | 
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | job summary report
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | --------------------------------------------------
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | PanDA job id: 7052862469
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | task id: 48967085
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | errors: (none)
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | pilot state: finished 
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | transexitcode: 0
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | exeerrorcode: 0
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | exeerrordiag: 
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | exitcode: 0
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | exitmsg: OK
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | cpuconsumptiontime: 22273 s
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | nevents: 400
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | neventsw: 0
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | pid: 3756189
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | pgrp: 3756189
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | corecount: 4
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | event service: False
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | sizes: {0: 2279821, 1: 2280282, 11: 2280282, 5771: 2306988, 5772: 2316010, 5773: 2316066, 5776: 2316388}
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | --------------------------------------------------
[2026-03-14 18:23:47] 2026-03-14 17:22:57,823 | INFO     | 
[2026-03-14 18:23:47] 2026-03-14 17:22:57,824 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot164/slots/0
[2026-03-14 18:23:47] 2026-03-14 17:22:57,845 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,845 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,845 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,845 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | job 7052862469 has completed (purged errors)
[2026-03-14 18:23:47] 2026-03-14 17:22:57,846 | INFO     | overall cleanup function is called
[2026-03-14 18:23:47] 2026-03-14 17:22:58,857 | INFO     | --- collectZombieJob: --- 10, [3756189]
[2026-03-14 18:23:47] 2026-03-14 17:22:58,857 | INFO     | zombie collector waiting for pid 3756189
[2026-03-14 18:23:47] 2026-03-14 17:22:58,857 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 18:23:47] 2026-03-14 17:22:58,857 | INFO     | collected zombie processes
[2026-03-14 18:23:47] 2026-03-14 17:22:58,857 | INFO     | will attempt to kill all subprocesses of pid=3756189
[2026-03-14 18:23:47] 2026-03-14 17:22:59,322 | INFO     | process IDs to be killed: [3756189] (in reverse order)
[2026-03-14 18:23:47] 2026-03-14 17:22:59,557 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 18:23:47] 2026-03-14 17:22:59,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 18:23:47] 2026-03-14 17:22:59,588 | INFO     | did not find any defunct processes belonging to 3756189
[2026-03-14 18:23:47] 2026-03-14 17:22:59,618 | INFO     | did not find any defunct processes belonging to 3756189
[2026-03-14 18:23:47] 2026-03-14 17:22:59,619 | INFO     | ready for new job
[2026-03-14 18:23:47] 2026-03-14 17:22:59,619 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 18:23:47] 2026-03-14 17:22:59,620 | INFO     | **************************************
[2026-03-14 18:23:47] 2026-03-14 17:22:59,620 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 18:23:47] 2026-03-14 17:22:59,620 | INFO     | **************************************
[2026-03-14 18:23:47] 2026-03-14 17:22:59,620 | INFO     | 
[2026-03-14 18:23:47] 2026-03-14 17:22:59,626 | INFO     | architecture information:
[2026-03-14 18:23:47] 2026-03-14 17:22:59,626 | INFO     | executing command: cat /etc/os-release
[2026-03-14 18:23:47] 2026-03-14 17:22:59,640 | INFO     | cat /etc/os-release:
[2026-03-14 18:23:47] NAME="CentOS Linux"
[2026-03-14 18:23:47] VERSION="7 (Core)"
[2026-03-14 18:23:47] ID="centos"
[2026-03-14 18:23:47] ID_LIKE="rhel fedora"
[2026-03-14 18:23:47] VERSION_ID="7"
[2026-03-14 18:23:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 18:23:47] ANSI_COLOR="0;31"
[2026-03-14 18:23:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 18:23:47] HOME_URL="https://www.centos.org/"
[2026-03-14 18:23:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 18:23:47] 
[2026-03-14 18:23:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 18:23:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 18:23:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 18:23:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 18:23:47] 
[2026-03-14 18:23:47] 2026-03-14 17:22:59,640 | INFO     | **************************************
[2026-03-14 18:23:47] 2026-03-14 17:23:00,143 | INFO     | executing command: df -mP /var/lib/boinc/var/slot164/slots/0
[2026-03-14 18:23:47] 2026-03-14 17:23:00,157 | INFO     | sufficient remaining disk space (20448280576 B)
[2026-03-14 18:23:47] 2026-03-14 17:23:00,157 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 18:23:47] 2026-03-14 17:23:00,157 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 18:23:47] 2026-03-14 17:23:00,157 | INFO     | update_server=False
[2026-03-14 18:23:47] 2026-03-14 17:23:00,157 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 18:23:47] 2026-03-14 17:23:00,157 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 18:23:47] 2026-03-14 17:23:00,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:23:47] 2026-03-14 17:23:00,158 | INFO     | aborting loop
[2026-03-14 18:23:47] 2026-03-14 17:23:00,561 | INFO     | all data control threads have been joined
[2026-03-14 18:23:47] 2026-03-14 17:23:00,898 | INFO     | all job control threads have been joined
[2026-03-14 18:23:47] 2026-03-14 17:23:01,101 | INFO     | all payload control threads have been joined
[2026-03-14 18:23:47] 2026-03-14 17:23:01,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 18:23:47] 2026-03-14 17:23:01,162 | INFO     | [job] retrieve thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:01,163 | INFO     | [job] job monitor thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:01,567 | INFO     | [data] control thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:01,583 | INFO     | [job] validate thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:01,756 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:01,904 | INFO     | [job] control thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:01,940 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:01,951 | INFO     | [payload] failed_post thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:02,066 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:02,107 | INFO     | [payload] control thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:02,163 | INFO     | [data] copytool_out thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:02,381 | INFO     | [data] copytool_in thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:02,497 | INFO     | [payload] validate_post thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:02,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:23:47] 2026-03-14 17:23:03,837 | INFO     | [job] queue monitor thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:05,123 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:10,700 | INFO     | job.realtimelogging is not enabled
[2026-03-14 18:23:47] 2026-03-14 17:23:11,705 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 18:23:47] 2026-03-14 17:23:31,440 | INFO     | PID=3743252 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 18:23:47] 2026-03-14 17:23:31,440 | INFO     | .. there are 49 such processes running
[2026-03-14 18:23:47] 2026-03-14 17:23:31,441 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 18:23:47] 2026-03-14 17:23:31,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 18:23:47] 2026-03-14 17:23:31,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 18:23:47] 2026-03-14 17:23:40,749 | INFO     | [monitor] cgroup control has ended
[2026-03-14 18:23:47] 2026-03-14 17:23:41,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23228333938496)>', '<ExcThread(monitor, started 23228094621440)>']
[2026-03-14 18:23:47] 2026-03-14 17:23:42,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 18:23:47] 2026-03-14 17:23:42,494 | INFO     | [monitor] control thread has ended
[2026-03-14 18:23:47] 2026-03-14 17:23:46,829 | INFO     | all workflow threads have been joined
[2026-03-14 18:23:47] 2026-03-14 17:23:46,829 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 18:23:47] 2026-03-14 17:23:46,829 | INFO     | traces error code: 0
[2026-03-14 18:23:47] 2026-03-14 17:23:46,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 18:23:47] 2026-03-14 17:23:47,039 [wrapper] ==== pilot stdout END ====
[2026-03-14 18:23:47] 2026-03-14 17:23:47,042 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 18:23:47] 2026-03-14 17:23:47,045 [wrapper] pilotpid: 3743252
[2026-03-14 18:23:47] 2026-03-14 17:23:47,047 [wrapper] Pilot exit status: 0
[2026-03-14 18:23:47] 2026-03-14 17:23:47,057 [wrapper] pandaids: 7052862469
[2026-03-14 18:23:47] 2026-03-14 17:23:47,190 [wrapper] cleanup supervisor_pilot  467143 3743253
[2026-03-14 18:23:47] 2026-03-14 17:23:47,192 [wrapper] Test setup, not cleaning
[2026-03-14 18:23:47] 2026-03-14 17:23:47,195 [wrapper] apfmon messages muted
[2026-03-14 18:23:47] 2026-03-14 17:23:47,197 [wrapper] ==== wrapper stdout END ====
[2026-03-14 18:23:47] 2026-03-14 17:23:47,200 [wrapper] ==== wrapper stderr END ====
[2026-03-14 18:23:47]  *** Error codes and diagnostics ***
[2026-03-14 18:23:47]     "exeErrorCode": 0,
[2026-03-14 18:23:47]     "exeErrorDiag": "",
[2026-03-14 18:23:47]     "pilotErrorCode": 0,
[2026-03-14 18:23:47]     "pilotErrorDiag": "",
[2026-03-14 18:23:47]  *** Listing of results directory ***
[2026-03-14 18:23:47] total 403588
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc    585013 Mar 13 04:13 pilot3.tar.gz
[2026-03-14 18:23:47] -rwx------. 1 boinc boinc     36322 Mar 13 04:16 runpilot2-wrapper.sh
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc      5111 Mar 13 04:18 queuedata.json
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc       100 Mar 14 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 18:23:47] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 16:46 run_atlas
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc       105 Mar 14 16:46 job.xml
[2026-03-14 18:23:47] -rw-r--r--. 2 boinc boinc 210972908 Mar 14 16:46 EVNT.48967083._000698.pool.root.1
[2026-03-14 18:23:47] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:46 start_atlas.sh
[2026-03-14 18:23:47] drwxrwx--x. 2 boinc boinc      4096 Mar 14 16:46 shared
[2026-03-14 18:23:47] -rw-r--r--. 2 boinc boinc    597525 Mar 14 16:46 input.tar.gz
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc      6709 Mar 14 16:46 init_data.xml
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc         0 Mar 14 16:46 boinc_lockfile
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc      2563 Mar 14 16:46 pandaJob.out
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc   1004579 Mar 14 16:46 agis_schedconf.cvmfs.json
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc   1511579 Mar 14 16:46 agis_ddmendpoints.agis.ALL.json
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc       444 Mar 14 16:46 workernode_map.json
[2026-03-14 18:23:47] drwx------. 5 boinc boinc      4096 Mar 14 16:46 pilot3
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc 196097099 Mar 14 18:22 HITS.48967085._017220.pool.root.1
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc       529 Mar 14 18:22 boinc_task_state.xml
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc      1032 Mar 14 18:22 memory_monitor_summary.json
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc    296369 Mar 14 18:22 log.48967085._017220.job.log.tgz.1
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc      6356 Mar 14 18:22 heartbeat.json
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc        95 Mar 14 18:23 pilot_heartbeat.json
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc      4902 Mar 14 18:23 pilotlog.txt
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc      8192 Mar 14 18:23 boinc_mmap_file
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc        27 Mar 14 18:23 wrapper_checkpoint.txt
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc    836389 Mar 14 18:23 log.48967085._017220.job.log.1
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc       357 Mar 14 18:23 output.list
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc       620 Mar 14 18:23 runtime_log
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc   1146880 Mar 14 18:23 result.tar.gz
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc      9221 Mar 14 18:23 runtime_log.err
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc       663 Mar 14 18:23 hYYMDmtB8K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmHzlLDmRHiMFo.diag
[2026-03-14 18:23:47] -rw-r--r--. 1 boinc boinc     21253 Mar 14 18:23 stderr.txt
[2026-03-14 18:23:47] HITS file was successfully produced:
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc 196097099 Mar 14 18:22 shared/HITS.pool.root.1
[2026-03-14 18:23:47]  *** Contents of shared directory: ***
[2026-03-14 18:23:47] total 399264
[2026-03-14 18:23:47] -rw-r--r--. 2 boinc boinc 210972908 Mar 14 16:46 ATLAS.root_0
[2026-03-14 18:23:47] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:46 start_atlas.sh
[2026-03-14 18:23:47] -rw-r--r--. 2 boinc boinc    597525 Mar 14 16:46 input.tar.gz
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc 196097099 Mar 14 18:22 HITS.pool.root.1
[2026-03-14 18:23:47] -rw-------. 1 boinc boinc   1146880 Mar 14 18:23 result.tar.gz
18:23:49 (3738332): run_atlas exited; CPU time 22540.263846
18:23:49 (3738332): called boinc_finish(0)

</stderr_txt>
]]>

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