Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:07:09 (101528): wrapper (7.7.26015): starting
18:07:09 (101528): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 18:07:09] Arguments: --nthreads 4
[2026-03-14 18:07:09] Threads: 4
[2026-03-14 18:07:09] Checking for CVMFS
[2026-03-14 18:07:09] No cvmfs_config command found, will try listing directly
[2026-03-14 18:07:09] CVMFS is ok
[2026-03-14 18:07:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 18:07:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 18:07:09] Further information can be found at the LHC@home message board.
[2026-03-14 18:07:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 18:07:09] Checking for apptainer binary...
[2026-03-14 18:07:09] which: no apptainer in ((null))
[2026-03-14 18:07:09] apptainer is not installed, using version from CVMFS
[2026-03-14 18:07:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 18:07:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-14 18:07:09] apptainer works
[2026-03-14 18:07:09] Set ATHENA_PROC_NUMBER=4
[2026-03-14 18:07:09] Set ATHENA_CORE_NUMBER=4
[2026-03-14 18:07:09] Starting ATLAS job with PandaID=7052859807
[2026-03-14 18:07:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 19:51:39]  *** The last 200 lines of the pilot log: ***
[2026-03-14 19:51:39] 2026-03-14 18:50:46,040 | INFO     | mean y: 2269448.5
[2026-03-14 19:51:39] 2026-03-14 18:50:46,040 | INFO     | intersect: -26713176385.577225
[2026-03-14 19:51:39] 2026-03-14 18:50:46,040 | INFO     | chi2: 1.9447602627917875
[2026-03-14 19:51:39] 2026-03-14 18:50:46,040 | INFO     | sum of square deviations: 282974608.0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,041 | INFO     | sum of deviations: 10836965004.0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,041 | INFO     | mean x: 1773510991.0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,041 | INFO     | mean y: 2288074.9175257734
[2026-03-14 19:51:39] 2026-03-14 18:50:46,041 | INFO     | intersect: -67917150632.02242
[2026-03-14 19:51:39] 2026-03-14 18:50:46,041 | INFO     | chi2: 1.118009919273253
[2026-03-14 19:51:39] 2026-03-14 18:50:46,041 | INFO     | current chi2=1.118009919273253 (change=42.511684310728285 %)
[2026-03-14 19:51:39] 2026-03-14 18:50:46,041 | INFO     | sum of square deviations: 241429643.0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,041 | INFO     | sum of deviations: 10191622549.500002
[2026-03-14 19:51:39] 2026-03-14 18:50:46,041 | INFO     | mean x: 1773510838.5
[2026-03-14 19:51:39] 2026-03-14 18:50:46,041 | INFO     | mean y: 2285705.054347826
[2026-03-14 19:51:39] 2026-03-14 18:50:46,041 | INFO     | intersect: -74864051455.7029
[2026-03-14 19:51:39] 2026-03-14 18:50:46,041 | INFO     | chi2: 1.1198620584386236
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | current chi2=1.1198620584386236 (change=-0.16566392958073958 %)
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | right removable region: 91
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | sum of square deviations: 282974608.0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | sum of deviations: -4931775885.0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | mean x: 1773511296.0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | mean y: 2301206.597938144
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | intersect: 30911647819.732563
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | chi2: 0.8608793157609458
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | current chi2=0.8608793157609458 (change=55.73339643802079 %)
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | sum of square deviations: 241429643.0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | sum of deviations: -5007700785.500001
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | mean x: 1773511448.5
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | mean y: 2301480.7282608696
[2026-03-14 19:51:39] 2026-03-14 18:50:46,042 | INFO     | intersect: 36788234489.57049
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | chi2: 0.8619952255670393
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | current chi2=0.8619952255670393 (change=-0.12962441838983896 %)
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | left removable region: 20
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | sum of square deviations: 110960220.0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | sum of deviations: 336402373.00000006
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | mean x: 1773511418.0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | mean y: 2325304.4507042253
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | intersect: -5374497574.575626
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | chi2: 3.141766694520863e-05
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | current memory leak: 3.03 B/s (using 71 data points, chi2=0.00)
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | could have reported an average CPU frequency of 3586 MHz (7 samples)
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | ..............................
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | . Timing measurements:
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | . get job = 0 s
[2026-03-14 19:51:39] 2026-03-14 18:50:46,043 | INFO     | . initial setup = 5 s
[2026-03-14 19:51:39] 2026-03-14 18:50:46,044 | INFO     | . payload setup = 5 s
[2026-03-14 19:51:39] 2026-03-14 18:50:46,044 | INFO     | . stage-in = 0 s
[2026-03-14 19:51:39] 2026-03-14 18:50:46,044 | INFO     | . payload execution = 6182 s
[2026-03-14 19:51:39] 2026-03-14 18:50:46,044 | INFO     | . stage-out = 0 s
[2026-03-14 19:51:39] 2026-03-14 18:50:46,044 | INFO     | . log creation = 0 s
[2026-03-14 19:51:39] 2026-03-14 18:50:46,044 | INFO     | ..............................
[2026-03-14 19:51:39] 2026-03-14 18:50:46,091 | INFO     | 
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | job summary report
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | --------------------------------------------------
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | PanDA job id: 7052859807
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | task id: 48967085
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | errors: (none)
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | pilot state: finished 
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | transexitcode: 0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | exeerrorcode: 0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | exeerrordiag: 
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | exitcode: 0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | exitmsg: OK
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | cpuconsumptiontime: 23501 s
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | nevents: 400
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | neventsw: 0
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | pid: 119119
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | pgrp: 119119
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | corecount: 4
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | event service: False
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | sizes: {0: 2280254, 11: 2280254, 6191: 2307127, 6193: 2316343}
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | --------------------------------------------------
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | 
[2026-03-14 19:51:39] 2026-03-14 18:50:46,092 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/1
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,111 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 19:51:39] 2026-03-14 18:50:46,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,112 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 19:51:39] 2026-03-14 18:50:46,112 | INFO     | job 7052859807 has completed (purged errors)
[2026-03-14 19:51:39] 2026-03-14 18:50:46,112 | INFO     | overall cleanup function is called
[2026-03-14 19:51:39] 2026-03-14 18:50:47,118 | INFO     | --- collectZombieJob: --- 10, [119119]
[2026-03-14 19:51:39] 2026-03-14 18:50:47,118 | INFO     | zombie collector waiting for pid 119119
[2026-03-14 19:51:39] 2026-03-14 18:50:47,118 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 19:51:39] 2026-03-14 18:50:47,118 | INFO     | collected zombie processes
[2026-03-14 19:51:39] 2026-03-14 18:50:47,118 | INFO     | will attempt to kill all subprocesses of pid=119119
[2026-03-14 19:51:39] 2026-03-14 18:50:47,592 | INFO     | process IDs to be killed: [119119] (in reverse order)
[2026-03-14 19:51:39] 2026-03-14 18:50:47,832 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 19:51:39] 2026-03-14 18:50:47,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 19:51:39] 2026-03-14 18:50:47,863 | INFO     | did not find any defunct processes belonging to 119119
[2026-03-14 19:51:39] 2026-03-14 18:50:47,893 | INFO     | did not find any defunct processes belonging to 119119
[2026-03-14 19:51:39] 2026-03-14 18:50:47,893 | INFO     | ready for new job
[2026-03-14 19:51:39] 2026-03-14 18:50:47,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 19:51:39] 2026-03-14 18:50:47,895 | INFO     | **************************************
[2026-03-14 19:51:39] 2026-03-14 18:50:47,895 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 19:51:39] 2026-03-14 18:50:47,895 | INFO     | **************************************
[2026-03-14 19:51:39] 2026-03-14 18:50:47,895 | INFO     | 
[2026-03-14 19:51:39] 2026-03-14 18:50:47,902 | INFO     | architecture information:
[2026-03-14 19:51:39] 2026-03-14 18:50:47,902 | INFO     | executing command: cat /etc/os-release
[2026-03-14 19:51:39] 2026-03-14 18:50:47,916 | INFO     | cat /etc/os-release:
[2026-03-14 19:51:39] NAME="CentOS Linux"
[2026-03-14 19:51:39] VERSION="7 (Core)"
[2026-03-14 19:51:39] ID="centos"
[2026-03-14 19:51:39] ID_LIKE="rhel fedora"
[2026-03-14 19:51:39] VERSION_ID="7"
[2026-03-14 19:51:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 19:51:39] ANSI_COLOR="0;31"
[2026-03-14 19:51:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 19:51:39] HOME_URL="https://www.centos.org/"
[2026-03-14 19:51:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 19:51:39] 
[2026-03-14 19:51:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 19:51:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 19:51:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 19:51:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 19:51:39] 
[2026-03-14 19:51:39] 2026-03-14 18:50:47,916 | INFO     | **************************************
[2026-03-14 19:51:39] 2026-03-14 18:50:48,419 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/1
[2026-03-14 19:51:39] 2026-03-14 18:50:48,438 | INFO     | sufficient remaining disk space (20822622208 B)
[2026-03-14 19:51:39] 2026-03-14 18:50:48,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 19:51:39] 2026-03-14 18:50:48,438 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 19:51:39] 2026-03-14 18:50:48,438 | INFO     | update_server=False
[2026-03-14 19:51:39] 2026-03-14 18:50:48,438 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 19:51:39] 2026-03-14 18:50:48,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 19:51:39] 2026-03-14 18:50:48,837 | INFO     | all job control threads have been joined
[2026-03-14 19:51:39] 2026-03-14 18:50:48,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 19:51:39] 2026-03-14 18:50:48,980 | INFO     | all data control threads have been joined
[2026-03-14 19:51:39] 2026-03-14 18:50:49,210 | INFO     | job.realtimelogging is not enabled
[2026-03-14 19:51:39] 2026-03-14 18:50:49,303 | WARNING  | process 119119 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 19:51:39] 2026-03-14 18:50:49,443 | INFO     | [job] retrieve thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:49,621 | INFO     | using path: /var/lib/boinc/var/slot116/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 19:51:39] 2026-03-14 18:50:49,621 | INFO     | using path: /var/lib/boinc/var/slot116/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 19:51:39] 2026-03-14 18:50:49,622 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 19:51:39] 2026-03-14 18:50:49,622 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 19:51:39] 2026-03-14 18:50:49,622 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7052859807/payload.stdout) since it has not been created yet
[2026-03-14 19:51:39] 2026-03-14 18:50:49,622 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/1
[2026-03-14 19:51:39] 2026-03-14 18:50:49,637 | INFO     | sufficient remaining disk space (21033385984 B)
[2026-03-14 19:51:39] 2026-03-14 18:50:49,637 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 19:51:39] 2026-03-14 18:50:49,637 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7052859807/HITS.48967085._017110.pool.root.1 since it does not exist
[2026-03-14 19:51:39] 2026-03-14 18:50:49,678 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:49,803 | INFO     | all payload control threads have been joined
[2026-03-14 19:51:39] 2026-03-14 18:50:49,842 | INFO     | [job] control thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:49,866 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:49,971 | INFO     | [job] validate thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:49,985 | INFO     | [data] control thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:50,115 | INFO     | number of running child processes to parent process 119119: 1
[2026-03-14 19:51:39] 2026-03-14 18:50:50,115 | INFO     | maximum number of monitored processes: 6
[2026-03-14 19:51:39] 2026-03-14 18:50:50,115 | INFO     | aborting job monitoring since job object (job id=7052859807) has expired
[2026-03-14 19:51:39] 2026-03-14 18:50:50,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 19:51:39] 2026-03-14 18:50:50,115 | INFO     | will abort loop
[2026-03-14 19:51:39] 2026-03-14 18:50:50,133 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:50,215 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:50,244 | INFO     | [data] copytool_in thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:50,279 | INFO     | [payload] validate_post thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:50,808 | INFO     | [payload] control thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:50,932 | INFO     | [data] copytool_out thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:51,018 | INFO     | [payload] failed_post thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:51,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 19:51:39] 2026-03-14 18:50:51,120 | INFO     | [job] job monitor thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:52,107 | INFO     | [job] queue monitor thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:50:52,446 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 19:51:39] 2026-03-14 18:51:18,102 | INFO     | PID=106194 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 19:51:39] 2026-03-14 18:51:18,103 | INFO     | .. there are 48 such processes running
[2026-03-14 19:51:39] 2026-03-14 18:51:18,103 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 19:51:39] 2026-03-14 18:51:18,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 19:51:39] 2026-03-14 18:51:18,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 19:51:39] 2026-03-14 18:51:31,915 | INFO     | [monitor] cgroup control has ended
[2026-03-14 19:51:39] 2026-03-14 18:51:33,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22716695209792)>', '<ExcThread(monitor, started 22716458747648)>']
[2026-03-14 19:51:39] 2026-03-14 18:51:34,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 19:51:39] 2026-03-14 18:51:34,178 | INFO     | [monitor] control thread has ended
[2026-03-14 19:51:39] 2026-03-14 18:51:38,930 | INFO     | all workflow threads have been joined
[2026-03-14 19:51:39] 2026-03-14 18:51:38,930 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 19:51:39] 2026-03-14 18:51:38,930 | INFO     | traces error code: 0
[2026-03-14 19:51:39] 2026-03-14 18:51:38,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 19:51:39] 2026-03-14 18:51:39,157 [wrapper] ==== pilot stdout END ====
[2026-03-14 19:51:39] 2026-03-14 18:51:39,160 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 19:51:39] 2026-03-14 18:51:39,162 [wrapper] pilotpid: 106194
[2026-03-14 19:51:39] 2026-03-14 18:51:39,163 [wrapper] Pilot exit status: 0
[2026-03-14 19:51:39] 2026-03-14 18:51:39,171 [wrapper] pandaids: 7052859807
[2026-03-14 19:51:39] 2026-03-14 18:51:39,304 [wrapper] cleanup supervisor_pilot  842838 106195
[2026-03-14 19:51:39] 2026-03-14 18:51:39,306 [wrapper] Test setup, not cleaning
[2026-03-14 19:51:39] 2026-03-14 18:51:39,308 [wrapper] apfmon messages muted
[2026-03-14 19:51:39] 2026-03-14 18:51:39,310 [wrapper] ==== wrapper stdout END ====
[2026-03-14 19:51:39] 2026-03-14 18:51:39,312 [wrapper] ==== wrapper stderr END ====
[2026-03-14 19:51:39]  *** Error codes and diagnostics ***
[2026-03-14 19:51:39]     "exeErrorCode": 0,
[2026-03-14 19:51:39]     "exeErrorDiag": "",
[2026-03-14 19:51:39]     "pilotErrorCode": 0,
[2026-03-14 19:51:39]     "pilotErrorDiag": "",
[2026-03-14 19:51:39]  *** Listing of results directory ***
[2026-03-14 19:51:39] total 410428
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc    585013 Mar 13 04:13 pilot3.tar.gz
[2026-03-14 19:51:39] -rwx------. 1 boinc boinc     36322 Mar 13 04:16 runpilot2-wrapper.sh
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc      5111 Mar 13 04:17 queuedata.json
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc       100 Mar 14 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 19:51:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 18:07 run_atlas
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc       105 Mar 14 18:07 job.xml
[2026-03-14 19:51:39] -rw-r--r--. 2 boinc boinc 214666385 Mar 14 18:07 EVNT.48967083._000692.pool.root.1
[2026-03-14 19:51:39] -rw-r--r--. 2 boinc boinc     15845 Mar 14 18:07 start_atlas.sh
[2026-03-14 19:51:39] drwxrwx--x. 2 boinc boinc      4096 Mar 14 18:07 shared
[2026-03-14 19:51:39] -rw-r--r--. 2 boinc boinc    597530 Mar 14 18:07 input.tar.gz
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc      6709 Mar 14 18:07 init_data.xml
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc         0 Mar 14 18:07 boinc_lockfile
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc      2563 Mar 14 18:07 pandaJob.out
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc   1004579 Mar 14 18:07 agis_schedconf.cvmfs.json
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc   1511579 Mar 14 18:07 agis_ddmendpoints.agis.ALL.json
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc       445 Mar 14 18:07 workernode_map.json
[2026-03-14 19:51:39] drwx------. 5 boinc boinc      4096 Mar 14 18:07 pilot3
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc 199308269 Mar 14 19:50 HITS.48967085._017110.pool.root.1
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc       529 Mar 14 19:50 boinc_task_state.xml
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc      1043 Mar 14 19:50 memory_monitor_summary.json
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc    289782 Mar 14 19:50 log.48967085._017110.job.log.tgz.1
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc      6355 Mar 14 19:50 heartbeat.json
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc        95 Mar 14 19:51 pilot_heartbeat.json
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc      8192 Mar 14 19:51 boinc_mmap_file
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc        27 Mar 14 19:51 wrapper_checkpoint.txt
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc      6444 Mar 14 19:51 pilotlog.txt
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc    894320 Mar 14 19:51 log.48967085._017110.job.log.1
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc       357 Mar 14 19:51 output.list
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc       620 Mar 14 19:51 runtime_log
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc   1198080 Mar 14 19:51 result.tar.gz
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc      9221 Mar 14 19:51 runtime_log.err
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc       663 Mar 14 19:51 TEtLDmtB8K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4VoLDm2WlGwm.diag
[2026-03-14 19:51:39] -rw-r--r--. 1 boinc boinc     21217 Mar 14 19:51 stderr.txt
[2026-03-14 19:51:39] HITS file was successfully produced:
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc 199308269 Mar 14 19:50 shared/HITS.pool.root.1
[2026-03-14 19:51:39]  *** Contents of shared directory: ***
[2026-03-14 19:51:39] total 406056
[2026-03-14 19:51:39] -rw-r--r--. 2 boinc boinc 214666385 Mar 14 18:07 ATLAS.root_0
[2026-03-14 19:51:39] -rw-r--r--. 2 boinc boinc     15845 Mar 14 18:07 start_atlas.sh
[2026-03-14 19:51:39] -rw-r--r--. 2 boinc boinc    597530 Mar 14 18:07 input.tar.gz
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc 199308269 Mar 14 19:50 HITS.pool.root.1
[2026-03-14 19:51:39] -rw-------. 1 boinc boinc   1198080 Mar 14 19:51 result.tar.gz
19:51:41 (101528): run_atlas exited; CPU time 23789.897981
19:51:41 (101528): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN