Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-13 09:52:46 (2321626): vboxwrapper version 26210
2026-03-13 09:52:46 (2321626): BOINC client version: 8.2.8
2026-03-13 09:52:46 (2321626): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-03-13 09:52:47 (2321626): Successfully copied 'init_data.xml' to the shared directory.
2026-03-13 09:52:47 (2321626): Create VM. (boinc_054a1e630a590ef5, slot#42)
2026-03-13 09:52:48 (2321626): Setting Memory Size for VM. (4608MB)
2026-03-13 09:52:48 (2321626): Setting CPU Count for VM. (2)
2026-03-13 09:52:49 (2321626): Setting Chipset Options for VM.
2026-03-13 09:52:49 (2321626): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-13 09:52:50 (2321626): Setting Boot Options for VM.
2026-03-13 09:52:51 (2321626): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-13 09:52:51 (2321626): Enabling VM Network Access.
2026-03-13 09:52:52 (2321626): Disabling USB Support for VM.
2026-03-13 09:52:52 (2321626): Disabling COM Port Support for VM.
2026-03-13 09:52:53 (2321626): Disabling LPT Port Support for VM.
2026-03-13 09:52:53 (2321626): Disabling Audio Support for VM.
2026-03-13 09:52:54 (2321626): Disabling Clipboard Support for VM.
2026-03-13 09:52:54 (2321626): Disabling Drag and Drop Support for VM.
2026-03-13 09:52:55 (2321626): Adding storage controller(s) to VM.
2026-03-13 09:52:55 (2321626): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-13 09:52:56 (2321626): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-13 09:52:56 (2321626): forwarding host port 54265 to guest port 80
2026-03-13 09:52:56 (2321626): Enabling remote desktop for VM.
2026-03-13 09:52:57 (2321626): Enabling shared directory for VM.
2026-03-13 09:52:58 (2321626): Starting VM using VBoxManage interface. (boinc_054a1e630a590ef5, slot#42)
2026-03-13 09:52:59 (2321626): Successfully started VM. (PID = '2322716')
2026-03-13 09:52:59 (2321626): Reporting VM Process ID to BOINC.
2026-03-13 09:52:59 (2321626): Guest Log: BIOS: VirtualBox 7.2.2
2026-03-13 09:52:59 (2321626): Guest Log: CPUID EDX: 0x178bfbff
2026-03-13 09:52:59 (2321626): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-13 09:52:59 (2321626): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-13 09:52:59 (2321626): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-13 09:52:59 (2321626): Detected: Web Application Enabled (http://localhost:54265)
2026-03-13 09:52:59 (2321626): Detected: Remote Desktop Enabled (localhost:43613)
2026-03-13 09:52:59 (2321626): Preference change detected
2026-03-13 09:52:59 (2321626): Setting CPU throttle for VM. (100%)
2026-03-13 09:52:59 (2321626): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-13 09:53:01 (2321626): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-13 09:53:01 (2321626): Guest Log: BIOS: Booting from Hard Disk...
2026-03-13 09:53:04 (2321626): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-13 09:53:04 (2321626): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-13 09:53:04 (2321626): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-13 09:54:10 (2321626): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-13 09:54:10 (2321626): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-13 09:54:19 (2321626): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-13 09:54:19 (2321626): Guest Log: 00:00:00.000308 main     Log opened 2026-03-13T08:54:18.865786000Z
2026-03-13 09:54:19 (2321626): Guest Log: 00:00:00.000489 main     OS Product: Linux
2026-03-13 09:54:19 (2321626): Guest Log: 00:00:00.000568 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-13 09:54:19 (2321626): Guest Log: 00:00:00.000601 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-13 09:54:19 (2321626): Guest Log: 00:00:00.000647 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-13 09:54:19 (2321626): Guest Log: 00:00:00.000648 main     Process ID: 1272
2026-03-13 09:54:19 (2321626): Guest Log: 00:00:00.000648 main     Package type: LINUX_64BITS_GENERIC
2026-03-13 09:54:19 (2321626): Guest Log: 00:00:00.002482 main     5.2.32 r132073 started. Verbose level = 0
2026-03-13 09:54:19 (2321626): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-13 09:54:19 (2321626): Guest Log: [INFO] Mounting shared directory
2026-03-13 09:54:19 (2321626): Guest Log: [INFO] Checking for init_data.xml
2026-03-13 09:54:22 (2321626): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-13 09:54:22 (2321626): Guest Log: [INFO] Detected branch: prod
2026-03-13 09:54:22 (2321626): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-13 09:54:22 (2321626): Guest Log: Copying input files
2026-03-13 09:54:24 (2321626): Guest Log: Copied input files into RunAtlas.
2026-03-13 09:54:24 (2321626): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-03-13 09:55:07 (2321626): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-13 09:55:08 (2321626): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-13 09:55:08 (2321626): Guest Log: 2.6.3.0 1546 0 29536 157233 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-03-13 09:55:08 (2321626): Guest Log: copied the webapp to /var/www
2026-03-13 09:55:08 (2321626): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-13 09:55:08 (2321626): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-13 09:55:08 (2321626): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-13 09:55:09 (2321626): Guest Log:  *** Starting ATLAS job. (PandaID=7052862502 taskID=48967085) ***
2026-03-13 11:32:00 (2321626): Status Report: Elapsed Time: '6000.000000'
2026-03-13 11:32:00 (2321626): Status Report: CPU Time: '11204.040000'
2026-03-13 13:11:00 (2321626): Status Report: Elapsed Time: '12000.000000'
2026-03-13 13:11:00 (2321626): Status Report: CPU Time: '23088.120000'
2026-03-13 14:50:01 (2321626): Status Report: Elapsed Time: '18000.000000'
2026-03-13 14:50:01 (2321626): Status Report: CPU Time: '34971.570000'
2026-03-13 16:29:01 (2321626): Status Report: Elapsed Time: '24000.000000'
2026-03-13 16:29:01 (2321626): Status Report: CPU Time: '46855.510000'
2026-03-13 18:08:02 (2321626): Status Report: Elapsed Time: '30000.000000'
2026-03-13 18:08:02 (2321626): Status Report: CPU Time: '58740.360000'
2026-03-13 19:47:02 (2321626): Status Report: Elapsed Time: '36000.000000'
2026-03-13 19:47:02 (2321626): Status Report: CPU Time: '70523.120000'
2026-03-13 19:47:39 (2321626): Guest Log:  *** Job finished ***
2026-03-13 19:47:39 (2321626): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:08,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:08,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:19,411 | INFO     | [monitor] cgroup control has ended
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:19,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187390187328)>', '<ExcThread(monitor, started 140186574903040)>']
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:20,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:20,550 | INFO     | [monitor] control thread has ended
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,662 | INFO     | all workflow threads have been joined
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,662 | INFO     | end of generic workflow (traces error code: 0)
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,663 | INFO     | traces error code: 0
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,815 [wrapper] ==== pilot stdout END ====
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,836 [wrapper] ==== wrapper stdout RESUME ====
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,846 [wrapper] pilotpid: 5925
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,854 [wrapper] Pilot exit status: 0
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,908 [wrapper] pandaids: 7052862502
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,956 [wrapper] cleanup supervisor_pilot  2544 5926
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,963 [wrapper] Test setup, not cleaning
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,972 [wrapper] apfmon messages muted
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,982 [wrapper] ==== wrapper stdout END ====
2026-03-13 19:47:39 (2321626): Guest Log: 2026-03-13 18:57:24,990 [wrapper] ==== wrapper stderr END ====
2026-03-13 19:47:39 (2321626): Guest Log:  *** Error codes and diagnostics ***
2026-03-13 19:47:39 (2321626): Guest Log:     "exeErrorCode": 0,
2026-03-13 19:47:39 (2321626): Guest Log:     "exeErrorDiag": "",
2026-03-13 19:47:39 (2321626): Guest Log:     "pilotErrorCode": 0,
2026-03-13 19:47:39 (2321626): Guest Log:     "pilotErrorDiag": "",
2026-03-13 19:47:39 (2321626): Guest Log:  *** Listing of results directory ***
2026-03-13 19:47:40 (2321626): Guest Log: total 207608
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 13 03:13 pilot3.tar.gz
2026-03-13 19:47:40 (2321626): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 13 03:14 runpilot2-wrapper.sh
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 13 03:15 queuedata.json
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 atlas atlas    597524 Mar 13 08:54 input.tar.gz
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Mar 13 08:54 start_atlas.sh
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 atlas atlas     10312 Mar 13 08:54 init_data.xml
2026-03-13 19:47:40 (2321626): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 13 08:54 EVNT.48967083._000700.pool.root.1 -> /data/./ATLAS.root_0
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Mar 13 08:55 pandaJob.out
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas        50 Mar 13 08:55 setup.sh.local
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas   1006487 Mar 13 08:55 agis_schedconf.cvmfs.json
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas       428 Mar 13 08:55 workernode_map.json
2026-03-13 19:47:40 (2321626): Guest Log: drwx------. 5 atlas atlas      4096 Mar 13 08:55 pilot3
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas 197490500 Mar 13 18:56 HITS.48967085._017253.pool.root.1
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas        95 Mar 13 18:56 pilot_heartbeat.json
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas      1027 Mar 13 18:56 memory_monitor_summary.json
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 13 18:56 agis_ddmendpoints.agis.ALL.json
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas    659037 Mar 13 18:56 log.48967085._017253.job.log.tgz.1
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas      6377 Mar 13 18:56 heartbeat.json
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 13 18:57 pilotlog.txt
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas   4957631 Mar 13 18:57 log.48967085._017253.job.log.1
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas       357 Mar 13 18:57 output.list
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 13 18:57 runtime_log
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas   5632000 Mar 13 18:57 result.tar.gz
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 atlas atlas      9232 Mar 13 18:57 runtime_log.err
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas       656 Mar 13 18:57 3WKODmx97K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmvwlLDmhRWSpm.diag
2026-03-13 19:47:40 (2321626): Guest Log: Looking for outputfile HITS.48967085._017253.pool.root.1
2026-03-13 19:47:40 (2321626): Guest Log: HITS file was successfully produced
2026-03-13 19:47:40 (2321626): Guest Log: -rw-------. 1 atlas atlas 197490500 Mar 13 18:56 /home/atlas/RunAtlas/HITS.48967085._017253.pool.root.1
2026-03-13 19:47:40 (2321626): Guest Log: Successfully finished the ATLAS job!
2026-03-13 19:47:40 (2321626): Guest Log: Copying the results back to the shared directory!
2026-03-13 19:47:40 (2321626): Guest Log:  *** Contents of shared directory: ***
2026-03-13 19:47:40 (2321626): Guest Log: total 214272
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 root root 213149050 Mar 13 08:52 ATLAS.root_0
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 root root     10312 Mar 13 08:52 init_data.xml
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 root root    597524 Mar 13 08:52 input.tar.gz
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 root root   5632000 Mar 13 18:47 result.tar.gz
2026-03-13 19:47:40 (2321626): Guest Log: -rw-r--r--. 1 root root     15845 Mar 13 08:52 start_atlas.sh
2026-03-13 19:47:40 (2321626): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-13 19:47:40 (2321626): VM Completion File Detected.
2026-03-13 19:47:40 (2321626): Powering off VM.
2026-03-13 19:47:41 (2321626): Successfully stopped VM.
2026-03-13 19:47:41 (2321626): Deregistering VM. (boinc_054a1e630a590ef5, slot#42)
2026-03-13 19:47:41 (2321626): Removing network bandwidth throttle group from VM.
2026-03-13 19:47:42 (2321626): Removing VM from VirtualBox.
2026-03-13 19:47:47 (2321626): called boinc_finish(0)

</stderr_txt>
]]>

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