Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-14 00:40:14 (2568): vboxwrapper version 26210
2026-03-14 00:40:14 (2568): BOINC client version: 8.0.2
2026-03-14 00:40:15 (2568): Detected: VirtualBox VboxManage Interface (Version: 7.0.8)
2026-03-14 00:40:15 (2568): Successfully copied 'init_data.xml' to the shared directory.
2026-03-14 00:40:15 (2568): Create VM. (boinc_c045cf6e6ae9d6b6, slot#0)
2026-03-14 00:40:16 (2568): Setting Memory Size for VM. (4800MB)
2026-03-14 00:40:16 (2568): Setting CPU Count for VM. (8)
2026-03-14 00:40:16 (2568): Setting Chipset Options for VM.
2026-03-14 00:40:17 (2568): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-14 00:40:17 (2568): Setting Boot Options for VM.
2026-03-14 00:40:17 (2568): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-14 00:40:18 (2568): Enabling VM Network Access.
2026-03-14 00:40:18 (2568): Disabling USB Support for VM.
2026-03-14 00:40:18 (2568): Disabling COM Port Support for VM.
2026-03-14 00:40:18 (2568): Disabling LPT Port Support for VM.
2026-03-14 00:40:19 (2568): Disabling Audio Support for VM.
2026-03-14 00:40:19 (2568): Disabling Clipboard Support for VM.
2026-03-14 00:40:19 (2568): Disabling Drag and Drop Support for VM.
2026-03-14 00:40:19 (2568): Adding storage controller(s) to VM.
2026-03-14 00:40:20 (2568): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-14 00:40:22 (2568): Adding VirtualBox Guest Additions to VM.
2026-03-14 00:40:22 (2568): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-14 00:40:22 (2568): forwarding host port 60595 to guest port 80
2026-03-14 00:40:23 (2568): Enabling remote desktop for VM.
2026-03-14 00:40:23 (2568): Required extension pack not installed, remote desktop not enabled.
2026-03-14 00:40:23 (2568): Enabling shared directory for VM.
2026-03-14 00:40:23 (2568): Starting VM using VBoxManage interface. (boinc_c045cf6e6ae9d6b6, slot#0)
2026-03-14 00:40:30 (2568): Successfully started VM. (PID = '4604')
2026-03-14 00:40:30 (2568): Reporting VM Process ID to BOINC.
2026-03-14 00:40:30 (2568): Guest Log: BIOS: VirtualBox 7.0.8
2026-03-14 00:40:30 (2568): Guest Log: CPUID EDX: 0x178bfbff
2026-03-14 00:40:30 (2568): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-14 00:40:30 (2568): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-14 00:40:30 (2568): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-14 00:40:30 (2568): Detected: Web Application Enabled (http://localhost:60595)
2026-03-14 00:40:30 (2568): Preference change detected
2026-03-14 00:40:30 (2568): Setting CPU throttle for VM. (99%)
2026-03-14 00:40:30 (2568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-14 00:40:32 (2568): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-14 00:40:32 (2568): Guest Log: BIOS: Booting from Hard Disk...
2026-03-14 00:40:35 (2568): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-14 00:40:35 (2568): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-14 00:40:35 (2568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-14 00:40:46 (2568): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-14 00:40:46 (2568): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-14 00:40:55 (2568): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-14 00:40:55 (2568): Guest Log: 00:00:00.000237 main     Log opened 2026-03-14T00:40:52.982800000Z
2026-03-14 00:40:55 (2568): Guest Log: 00:00:00.000377 main     OS Product: Linux
2026-03-14 00:40:55 (2568): Guest Log: 00:00:00.000442 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-14 00:40:55 (2568): Guest Log: 00:00:00.000510 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-14 00:40:55 (2568): Guest Log: 00:00:00.000584 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-14 00:40:55 (2568): Guest Log: 00:00:00.000586 main     Process ID: 1368
2026-03-14 00:40:55 (2568): Guest Log: 00:00:00.000587 main     Package type: LINUX_64BITS_GENERIC
2026-03-14 00:40:55 (2568): Guest Log: 00:00:00.001841 main     5.2.32 r132073 started. Verbose level = 0
2026-03-14 00:40:55 (2568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-14 00:40:55 (2568): Guest Log: [INFO] Mounting shared directory
2026-03-14 00:40:55 (2568): Guest Log: [INFO] Checking for init_data.xml
2026-03-14 00:41:05 (2568): Guest Log: 00:00:10.014308 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 588 775 462 000ns (GuestNow=1 773 409 264 210 675 000 ns GuestLast=1 773 448 852 986 137 000 ns fSetTimeLastLoop=true )
2026-03-14 00:41:06 (2568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-14 00:41:06 (2568): Guest Log: [INFO] Detected branch: prod
2026-03-14 00:41:06 (2568): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-14 00:41:06 (2568): Guest Log: Copying input files
2026-03-14 00:41:08 (2568): Guest Log: Copied input files into RunAtlas.
2026-03-14 00:41:08 (2568): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-14 00:41:08 (2568): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-14 00:41:08 (2568): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-14 00:41:08 (2568): Guest Log: Further information can be found at the LHC@home message board.
2026-03-14 00:41:20 (2568): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-14 00:41:20 (2568): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-14 00:41:20 (2568): Guest Log: 2.6.3.0 1668 0 30176 157241 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-14 00:41:21 (2568): Guest Log: copied the webapp to /var/www
2026-03-14 00:41:21 (2568): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-14 00:41:21 (2568): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-14 00:41:21 (2568): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-14 00:41:21 (2568): Guest Log:  *** Starting ATLAS job. (PandaID=7052859854 taskID=48967085) ***
2026-03-14 02:20:50 (2568): Status Report: Elapsed Time: '6000.000000'
2026-03-14 02:20:50 (2568): Status Report: CPU Time: '35432.656250'
2026-03-14 04:01:16 (2568): Status Report: Elapsed Time: '12000.000000'
2026-03-14 04:01:16 (2568): Status Report: CPU Time: '78622.062500'
2026-03-14 05:30:17 (2568): Guest Log:  *** Job finished ***
2026-03-14 05:30:17 (2568): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:07,184 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:07,184 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:07,984 | INFO     | [monitor] cgroup control has ended
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:09,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140362084501312)>', '<ExcThread(monitor, started 140361208952576)>']
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:10,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:10,417 | INFO     | [monitor] control thread has ended
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:14,992 | INFO     | all workflow threads have been joined
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:14,992 | INFO     | end of generic workflow (traces error code: 0)
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:14,992 | INFO     | traces error code: 0
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:14,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:15,131 [wrapper] ==== pilot stdout END ====
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:15,139 [wrapper] ==== wrapper stdout RESUME ====
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:15,144 [wrapper] pilotpid: 6119
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:15,151 [wrapper] Pilot exit status: 0
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:16,092 [wrapper] pandaids: 7052859854
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:16,132 [wrapper] cleanup supervisor_pilot 28741 6120
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:16,142 [wrapper] Test setup, not cleaning
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:16,148 [wrapper] apfmon messages muted
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:16,154 [wrapper] ==== wrapper stdout END ====
2026-03-14 05:30:17 (2568): Guest Log: 2026-03-13 18:30:16,160 [wrapper] ==== wrapper stderr END ====
2026-03-14 05:30:17 (2568): Guest Log:  *** Error codes and diagnostics ***
2026-03-14 05:30:17 (2568): Guest Log:     "exeErrorCode": 0,
2026-03-14 05:30:17 (2568): Guest Log:     "exeErrorDiag": "",
2026-03-14 05:30:17 (2568): Guest Log:     "pilotErrorCode": 0,
2026-03-14 05:30:17 (2568): Guest Log:     "pilotErrorDiag": "",
2026-03-14 05:30:17 (2568): Guest Log:  *** Listing of results directory ***
2026-03-14 05:30:17 (2568): Guest Log: total 206492
2026-03-14 05:30:17 (2568): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 13 03:13 pilot3.tar.gz
2026-03-14 05:30:17 (2568): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 13 03:14 runpilot2-wrapper.sh
2026-03-14 05:30:17 (2568): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 13 03:15 queuedata.json
2026-03-14 05:30:17 (2568): Guest Log: -rwxr-xr-x. 1 atlas atlas      8837 Mar 13 13:41 init_data.xml
2026-03-14 05:30:17 (2568): Guest Log: -rwxr-xr-x. 1 atlas atlas    597521 Mar 13 13:41 input.tar.gz
2026-03-14 05:30:17 (2568): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 13 13:41 start_atlas.sh
2026-03-14 05:30:17 (2568): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 13 13:41 EVNT.48967083._000694.pool.root.1 -> /data/./ATLAS.root_0
2026-03-14 05:30:17 (2568): Guest Log: -rw-r--r--. 1 atlas atlas      2571 Mar 13 13:41 pandaJob.out
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas   1006481 Mar 13 13:44 agis_schedconf.cvmfs.json
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas       425 Mar 13 13:44 workernode_map.json
2026-03-14 05:30:17 (2568): Guest Log: drwx------. 5 atlas atlas      4096 Mar 13 13:44 pilot3
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas 201903576 Mar 13 18:28 HITS.48967085._017157.pool.root.1
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas      1033 Mar 13 18:29 memory_monitor_summary.json
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 13 18:29 agis_ddmendpoints.agis.ALL.json
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas    500067 Mar 13 18:29 log.48967085._017157.job.log.tgz.1
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas      6381 Mar 13 18:29 heartbeat.json
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas        95 Mar 13 18:30 pilot_heartbeat.json
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 13 18:30 pilotlog.txt
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas   2335762 Mar 13 18:30 log.48967085._017157.job.log.1
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas       357 Mar 13 18:30 output.list
2026-03-14 05:30:17 (2568): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 13 18:30 runtime_log
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas   2856960 Mar 13 18:30 result.tar.gz
2026-03-14 05:30:17 (2568): Guest Log: -rw-r--r--. 1 atlas atlas      8755 Mar 13 18:30 runtime_log.err
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas       661 Mar 13 18:30 6KuMDmw97K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmuvlLDmJAj9Xo.diag
2026-03-14 05:30:17 (2568): Guest Log: Looking for outputfile HITS.48967085._017157.pool.root.1
2026-03-14 05:30:17 (2568): Guest Log: HITS file was successfully produced
2026-03-14 05:30:17 (2568): Guest Log: -rw-------. 1 atlas atlas 201903576 Mar 13 18:28 /home/atlas/RunAtlas/HITS.48967085._017157.pool.root.1
2026-03-14 05:30:18 (2568): Guest Log: Successfully finished the ATLAS job!
2026-03-14 05:30:18 (2568): Guest Log: Copying the results back to the shared directory!
2026-03-14 05:30:18 (2568): Guest Log:  *** Contents of shared directory: ***
2026-03-14 05:30:18 (2568): Guest Log: total 408196
2026-03-14 05:30:18 (2568): Guest Log: -rwxrwxrwx. 1 root root 212600834 Mar 13 13:40 ATLAS.root_0
2026-03-14 05:30:18 (2568): Guest Log: -rwxrwxrwx. 1 root root 201903576 Mar 13 18:30 HITS.pool.root.1
2026-03-14 05:30:18 (2568): Guest Log: -rwxrwxrwx. 1 root root      8837 Mar 13 13:40 init_data.xml
2026-03-14 05:30:18 (2568): Guest Log: -rwxrwxrwx. 1 root root    597521 Mar 13 08:45 input.tar.gz
2026-03-14 05:30:18 (2568): Guest Log: -rwxrwxrwx. 1 root root   2856960 Mar 13 18:30 result.tar.gz
2026-03-14 05:30:18 (2568): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 13 08:45 start_atlas.sh
2026-03-14 05:30:18 (2568): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-14 05:30:18 (2568): VM Completion File Detected.
2026-03-14 05:30:18 (2568): Powering off VM.
2026-03-14 05:30:19 (2568): Successfully stopped VM.
2026-03-14 05:30:19 (2568): Deregistering VM. (boinc_c045cf6e6ae9d6b6, slot#0)
2026-03-14 05:30:19 (2568): Removing network bandwidth throttle group from VM.
2026-03-14 05:30:19 (2568): Removing VM from VirtualBox.
2026-03-14 05:30:24 (2568): called boinc_finish(0)

</stderr_txt>
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