Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:54:30 (4192832): wrapper (7.7.26015): starting
18:54:30 (4192832): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 18:54:30] Arguments: --nthreads 4
[2026-03-14 18:54:30] Threads: 4
[2026-03-14 18:54:30] Checking for CVMFS
[2026-03-14 18:54:30] No cvmfs_config command found, will try listing directly
[2026-03-14 18:54:30] CVMFS is ok
[2026-03-14 18:54:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 18:54:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 18:54:30] Further information can be found at the LHC@home message board.
[2026-03-14 18:54:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 18:54:30] Checking for apptainer binary...
[2026-03-14 18:54:30] which: no apptainer in ((null))
[2026-03-14 18:54:30] apptainer is not installed, using version from CVMFS
[2026-03-14 18:54:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 18:54:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot180/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-14 18:54:30] apptainer works
[2026-03-14 18:54:30] Set ATHENA_PROC_NUMBER=4
[2026-03-14 18:54:30] Set ATHENA_CORE_NUMBER=4
[2026-03-14 18:54:30] Starting ATLAS job with PandaID=7052859843
[2026-03-14 18:54:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot180/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 20:36:00]  *** The last 200 lines of the pilot log: ***
[2026-03-14 20:36:00]  storage_token=
[2026-03-14 20:36:00]  surl=/var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7052859843/log.48967085._017146.job.log.tgz.1
[2026-03-14 20:36:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/2e/log.48967085._017146.job.log.tgz.1
[2026-03-14 20:36:00]  workdir=None
[2026-03-14 20:36:00] ]
[2026-03-14 20:36:00] 2026-03-14 19:35:07,254 | INFO     | transferring file log.48967085._017146.job.log.tgz.1 from /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7052859843/log.48967085._017146.job.log.tgz.1 to /var/lib/
[2026-03-14 20:36:00] 2026-03-14 19:35:07,254 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7052859843/log.48967085._017146.job.log.tgz.1 /var/lib/boinc/var/slot180/slots/0/
[2026-03-14 20:36:00] 2026-03-14 19:35:07,272 | INFO     | adding to output.list: log.48967085._017146.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/2e/log.48967085._017146.job.log.tg
[2026-03-14 20:36:00] 2026-03-14 19:35:07,272 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 20:36:00] 2026-03-14 19:35:07,272 | INFO     | summary of transferred files:
[2026-03-14 20:36:00] 2026-03-14 19:35:07,272 | INFO     |  -- lfn=log.48967085._017146.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 20:36:00] 2026-03-14 19:35:07,273 | INFO     | stage-out finished correctly
[2026-03-14 20:36:00] 2026-03-14 19:35:08,921 | INFO     | time since job start (6024s) is within the limit (345600.0s)
[2026-03-14 20:36:00] 2026-03-14 19:35:09,561 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 20:36:00] 2026-03-14 19:35:09,607 | INFO     | job 7052859843 has state=finished
[2026-03-14 20:36:00] 2026-03-14 19:35:09,607 | INFO     | preparing for final server update for job 7052859843 in state='finished'
[2026-03-14 20:36:00] 2026-03-14 19:35:09,607 | INFO     | reading metadata from: /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7052859843/jobReport.json
[2026-03-14 20:36:00] 2026-03-14 19:35:09,609 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot180/slots/0/workernode_map.json
[2026-03-14 20:36:00] 2026-03-14 19:35:09,609 | INFO     | this job has now completed (state=finished)
[2026-03-14 20:36:00] 2026-03-14 19:35:09,609 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 20:36:00] 2026-03-14 19:35:09,609 | INFO     | log transfer has been attempted: DONE
[2026-03-14 20:36:00] 2026-03-14 19:35:09,609 | INFO     | job 7052859843 has finished - writing final server update
[2026-03-14 20:36:00] 2026-03-14 19:35:09,609 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_901012/.job.ad'
[2026-03-14 20:36:00] 2026-03-14 19:35:09,609 | INFO     | total number of processed events: 400 (read)
[2026-03-14 20:36:00] 2026-03-14 19:35:09,627 | INFO     | using path: /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7052859843/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 20:36:00] 2026-03-14 19:35:09,627 | INFO     | extracted standard info from prmon json
[2026-03-14 20:36:00] 2026-03-14 19:35:09,628 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 20:36:00] 2026-03-14 19:35:09,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 20:36:00] 2026-03-14 19:35:09,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 20:36:00] 2026-03-14 19:35:09,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 20:36:00] 2026-03-14 19:35:09,629 | INFO     | fitting pss+swap vs Time
[2026-03-14 20:36:00] 2026-03-14 19:35:09,629 | INFO     | sum of square deviations: 241429643.0
[2026-03-14 20:36:00] 2026-03-14 19:35:09,629 | INFO     | sum of deviations: 289522561.49999994
[2026-03-14 20:36:00] 2026-03-14 19:35:09,629 | INFO     | mean x: 1773513986.5
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | mean y: 2329811.3804347827
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | intersect: -2124469142.7461567
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | chi2: 0.00038886002634226126
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | current memory leak: 1.20 B/s (using 92 data points, chi2=0.00)
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | could have reported an average CPU frequency of 3578 MHz (7 samples)
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | ..............................
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | . Timing measurements:
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | . get job = 0 s
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | . initial setup = 5 s
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | . payload setup = 5 s
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | . stage-in = 0 s
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | . payload execution = 6001 s
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | . stage-out = 0 s
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | . log creation = 0 s
[2026-03-14 20:36:00] 2026-03-14 19:35:09,630 | INFO     | ..............................
[2026-03-14 20:36:00] 2026-03-14 19:35:09,676 | INFO     | 
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | job summary report
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | --------------------------------------------------
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | PanDA job id: 7052859843
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | task id: 48967085
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | errors: (none)
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | pilot state: finished 
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | transexitcode: 0
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | exeerrorcode: 0
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | exeerrordiag: 
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | exitcode: 0
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | exitmsg: OK
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | cpuconsumptiontime: 23027 s
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | nevents: 400
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | neventsw: 0
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | pid: 17903
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | pgrp: 17903
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | corecount: 4
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | event service: False
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | sizes: {0: 2279829, 1: 2280290, 11: 2280290, 6010: 2307134, 6012: 2316156, 6014: 2316534}
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | --------------------------------------------------
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | 
[2026-03-14 20:36:00] 2026-03-14 19:35:09,677 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot180/slots/0
[2026-03-14 20:36:00] 2026-03-14 19:35:09,697 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,697 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | job 7052859843 has completed (purged errors)
[2026-03-14 20:36:00] 2026-03-14 19:35:09,698 | INFO     | overall cleanup function is called
[2026-03-14 20:36:00] 2026-03-14 19:35:10,511 | INFO     | PID=10949 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 20:36:00] 2026-03-14 19:35:10,511 | INFO     | .. there are 50 such processes running
[2026-03-14 20:36:00] 2026-03-14 19:35:10,705 | INFO     | --- collectZombieJob: --- 10, [17903]
[2026-03-14 20:36:00] 2026-03-14 19:35:10,705 | INFO     | zombie collector waiting for pid 17903
[2026-03-14 20:36:00] 2026-03-14 19:35:10,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 20:36:00] 2026-03-14 19:35:10,705 | INFO     | collected zombie processes
[2026-03-14 20:36:00] 2026-03-14 19:35:10,705 | INFO     | will attempt to kill all subprocesses of pid=17903
[2026-03-14 20:36:00] 2026-03-14 19:35:11,180 | INFO     | process IDs to be killed: [17903] (in reverse order)
[2026-03-14 20:36:00] 2026-03-14 19:35:11,437 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 20:36:00] 2026-03-14 19:35:11,437 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 20:36:00] 2026-03-14 19:35:11,494 | INFO     | did not find any defunct processes belonging to 17903
[2026-03-14 20:36:00] 2026-03-14 19:35:11,548 | INFO     | did not find any defunct processes belonging to 17903
[2026-03-14 20:36:00] 2026-03-14 19:35:11,548 | INFO     | ready for new job
[2026-03-14 20:36:00] 2026-03-14 19:35:11,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 20:36:00] 2026-03-14 19:35:11,550 | INFO     | **************************************
[2026-03-14 20:36:00] 2026-03-14 19:35:11,550 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 20:36:00] 2026-03-14 19:35:11,550 | INFO     | **************************************
[2026-03-14 20:36:00] 2026-03-14 19:35:11,550 | INFO     | 
[2026-03-14 20:36:00] 2026-03-14 19:35:11,556 | INFO     | architecture information:
[2026-03-14 20:36:00] 2026-03-14 19:35:11,557 | INFO     | executing command: cat /etc/os-release
[2026-03-14 20:36:00] 2026-03-14 19:35:11,570 | INFO     | cat /etc/os-release:
[2026-03-14 20:36:00] NAME="CentOS Linux"
[2026-03-14 20:36:00] VERSION="7 (Core)"
[2026-03-14 20:36:00] ID="centos"
[2026-03-14 20:36:00] ID_LIKE="rhel fedora"
[2026-03-14 20:36:00] VERSION_ID="7"
[2026-03-14 20:36:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 20:36:00] ANSI_COLOR="0;31"
[2026-03-14 20:36:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 20:36:00] HOME_URL="https://www.centos.org/"
[2026-03-14 20:36:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 20:36:00] 
[2026-03-14 20:36:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 20:36:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 20:36:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 20:36:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 20:36:00] 
[2026-03-14 20:36:00] 2026-03-14 19:35:11,570 | INFO     | **************************************
[2026-03-14 20:36:00] 2026-03-14 19:35:11,816 | WARNING  | process 17903 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 20:36:00] 2026-03-14 19:35:12,073 | INFO     | executing command: df -mP /var/lib/boinc/var/slot180/slots/0
[2026-03-14 20:36:00] 2026-03-14 19:35:12,089 | INFO     | sufficient remaining disk space (20187185152 B)
[2026-03-14 20:36:00] 2026-03-14 19:35:12,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 20:36:00] 2026-03-14 19:35:12,090 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 20:36:00] 2026-03-14 19:35:12,090 | INFO     | update_server=False
[2026-03-14 20:36:00] 2026-03-14 19:35:12,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 20:36:00] 2026-03-14 19:35:12,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 20:36:00] 2026-03-14 19:35:12,157 | INFO     | using path: /var/lib/boinc/var/slot180/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 20:36:00] 2026-03-14 19:35:12,157 | INFO     | using path: /var/lib/boinc/var/slot180/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 20:36:00] 2026-03-14 19:35:12,158 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 20:36:00] 2026-03-14 19:35:12,158 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 20:36:00] 2026-03-14 19:35:12,158 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7052859843/payload.stdout) since it has not been created yet
[2026-03-14 20:36:00] 2026-03-14 19:35:12,158 | INFO     | executing command: df -mP /var/lib/boinc/var/slot180/slots/0
[2026-03-14 20:36:00] 2026-03-14 19:35:12,172 | INFO     | sufficient remaining disk space (20187185152 B)
[2026-03-14 20:36:00] 2026-03-14 19:35:12,173 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 20:36:00] 2026-03-14 19:35:12,173 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7052859843/HITS.48967085._017146.pool.root.1 since it does not exist
[2026-03-14 20:36:00] 2026-03-14 19:35:12,339 | INFO     | job.realtimelogging is not enabled
[2026-03-14 20:36:00] 2026-03-14 19:35:12,568 | INFO     | all payload control threads have been joined
[2026-03-14 20:36:00] 2026-03-14 19:35:12,656 | INFO     | number of running child processes to parent process 17903: 1
[2026-03-14 20:36:00] 2026-03-14 19:35:12,656 | INFO     | maximum number of monitored processes: 6
[2026-03-14 20:36:00] 2026-03-14 19:35:12,656 | INFO     | aborting job monitoring since job object (job id=7052859843) has expired
[2026-03-14 20:36:00] 2026-03-14 19:35:12,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 20:36:00] 2026-03-14 19:35:12,656 | INFO     | will abort loop
[2026-03-14 20:36:00] 2026-03-14 19:35:12,833 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 20:36:00] 2026-03-14 19:35:13,095 | INFO     | [job] retrieve thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:13,144 | INFO     | all data control threads have been joined
[2026-03-14 20:36:00] 2026-03-14 19:35:13,213 | INFO     | all job control threads have been joined
[2026-03-14 20:36:00] 2026-03-14 19:35:13,345 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:13,539 | INFO     | [job] validate thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:13,573 | INFO     | [payload] control thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:13,661 | INFO     | [job] job monitor thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:13,729 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:13,859 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:14,058 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:14,067 | INFO     | [data] copytool_in thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:14,149 | INFO     | [data] control thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:14,218 | INFO     | [job] control thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:14,319 | INFO     | [payload] failed_post thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:14,609 | INFO     | [payload] validate_post thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:14,686 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 20:36:00] 2026-03-14 19:35:14,838 | INFO     | [data] copytool_out thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:15,691 | INFO     | [job] queue monitor thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:16,095 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 20:36:00] 2026-03-14 19:35:43,233 | INFO     | PID=10949 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 20:36:00] 2026-03-14 19:35:43,233 | INFO     | .. there are 50 such processes running
[2026-03-14 20:36:00] 2026-03-14 19:35:43,234 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 20:36:00] 2026-03-14 19:35:43,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 20:36:00] 2026-03-14 19:35:43,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 20:36:00] 2026-03-14 19:35:54,060 | INFO     | [monitor] cgroup control has ended
[2026-03-14 20:36:00] 2026-03-14 19:35:55,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23352243894080)>', '<ExcThread(monitor, started 23351921702656)>']
[2026-03-14 20:36:00] 2026-03-14 19:35:55,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 20:36:00] 2026-03-14 19:35:55,294 | INFO     | [monitor] control thread has ended
[2026-03-14 20:36:00] 2026-03-14 19:36:00,090 | INFO     | all workflow threads have been joined
[2026-03-14 20:36:00] 2026-03-14 19:36:00,090 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 20:36:00] 2026-03-14 19:36:00,090 | INFO     | traces error code: 0
[2026-03-14 20:36:00] 2026-03-14 19:36:00,090 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 20:36:00] 2026-03-14 19:36:00,200 [wrapper] ==== pilot stdout END ====
[2026-03-14 20:36:00] 2026-03-14 19:36:00,203 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 20:36:00] 2026-03-14 19:36:00,204 [wrapper] pilotpid: 10949
[2026-03-14 20:36:00] 2026-03-14 19:36:00,205 [wrapper] Pilot exit status: 0
[2026-03-14 20:36:00] 2026-03-14 19:36:00,212 [wrapper] pandaids: 7052859843
[2026-03-14 20:36:00] 2026-03-14 19:36:00,352 [wrapper] cleanup supervisor_pilot  732098 10950
[2026-03-14 20:36:00] 2026-03-14 19:36:00,354 [wrapper] Test setup, not cleaning
[2026-03-14 20:36:00] 2026-03-14 19:36:00,356 [wrapper] apfmon messages muted
[2026-03-14 20:36:00] 2026-03-14 19:36:00,357 [wrapper] ==== wrapper stdout END ====
[2026-03-14 20:36:00] 2026-03-14 19:36:00,358 [wrapper] ==== wrapper stderr END ====
[2026-03-14 20:36:00]  *** Error codes and diagnostics ***
[2026-03-14 20:36:00]     "exeErrorCode": 0,
[2026-03-14 20:36:00]     "exeErrorDiag": "",
[2026-03-14 20:36:00]     "pilotErrorCode": 0,
[2026-03-14 20:36:00]     "pilotErrorDiag": "",
[2026-03-14 20:36:00]  *** Listing of results directory ***
[2026-03-14 20:36:00] total 408168
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc    585013 Mar 13 04:13 pilot3.tar.gz
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc      5111 Mar 13 04:13 queuedata.json
[2026-03-14 20:36:00] -rwx------. 1 boinc boinc     36322 Mar 13 04:13 runpilot2-wrapper.sh
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc       100 Mar 14 18:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 20:36:00] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 18:54 run_atlas
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc       105 Mar 14 18:54 job.xml
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc      6708 Mar 14 18:54 init_data.xml
[2026-03-14 20:36:00] -rw-r--r--. 2 boinc boinc 215018386 Mar 14 18:54 EVNT.48967083._000693.pool.root.1
[2026-03-14 20:36:00] -rw-r--r--. 2 boinc boinc     15845 Mar 14 18:54 start_atlas.sh
[2026-03-14 20:36:00] drwxrwx--x. 2 boinc boinc      4096 Mar 14 18:54 shared
[2026-03-14 20:36:00] -rw-r--r--. 2 boinc boinc    597524 Mar 14 18:54 input.tar.gz
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc         0 Mar 14 18:54 boinc_lockfile
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc      2571 Mar 14 18:54 pandaJob.out
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc   1005897 Mar 14 18:54 agis_schedconf.cvmfs.json
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc   1511579 Mar 14 18:54 agis_ddmendpoints.agis.ALL.json
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc       445 Mar 14 18:54 workernode_map.json
[2026-03-14 20:36:00] drwx------. 5 boinc boinc      4096 Mar 14 18:54 pilot3
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc 196672194 Mar 14 20:34 HITS.48967085._017146.pool.root.1
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc       529 Mar 14 20:34 boinc_task_state.xml
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc      1031 Mar 14 20:35 memory_monitor_summary.json
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc    300549 Mar 14 20:35 log.48967085._017146.job.log.tgz.1
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc      6354 Mar 14 20:35 heartbeat.json
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc        95 Mar 14 20:35 pilot_heartbeat.json
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc        27 Mar 14 20:35 wrapper_checkpoint.txt
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc      8192 Mar 14 20:35 boinc_mmap_file
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc      6441 Mar 14 20:36 pilotlog.txt
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc    866105 Mar 14 20:36 log.48967085._017146.job.log.1
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc       357 Mar 14 20:36 output.list
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc       620 Mar 14 20:36 runtime_log
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc   1187840 Mar 14 20:36 result.tar.gz
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc      9221 Mar 14 20:36 runtime_log.err
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc       663 Mar 14 20:36 aUBMDms87K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNPoLDmeQOWUn.diag
[2026-03-14 20:36:00] -rw-r--r--. 1 boinc boinc     22336 Mar 14 20:36 stderr.txt
[2026-03-14 20:36:00] HITS file was successfully produced:
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc 196672194 Mar 14 20:34 shared/HITS.pool.root.1
[2026-03-14 20:36:00]  *** Contents of shared directory: ***
[2026-03-14 20:36:00] total 403812
[2026-03-14 20:36:00] -rw-r--r--. 2 boinc boinc 215018386 Mar 14 18:54 ATLAS.root_0
[2026-03-14 20:36:00] -rw-r--r--. 2 boinc boinc     15845 Mar 14 18:54 start_atlas.sh
[2026-03-14 20:36:00] -rw-r--r--. 2 boinc boinc    597524 Mar 14 18:54 input.tar.gz
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc 196672194 Mar 14 20:34 HITS.pool.root.1
[2026-03-14 20:36:00] -rw-------. 1 boinc boinc   1187840 Mar 14 20:36 result.tar.gz
20:36:02 (4192832): run_atlas exited; CPU time 23288.051036
20:36:02 (4192832): called boinc_finish(0)

</stderr_txt>
]]>

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