Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:32:36 (3713): wrapper (7.7.26015): starting
17:32:36 (3713): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 17:32:36] Arguments: --nthreads 8
[2026-03-13 17:32:36] Threads: 8
[2026-03-13 17:32:36] Checking for CVMFS
[2026-03-13 17:32:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 17:32:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 17:32:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 17:32:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 17:32:37] 2.11.2.0 26122 126379 130728 157247 2 125 21155426 25165825 741 130560 155 42803360 99.824 34059848 1115 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 17:32:37] CVMFS is ok
[2026-03-13 17:32:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 17:32:37] Checking for apptainer binary...
[2026-03-13 17:32:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 17:32:37] Running /usr/bin/apptainer --version
[2026-03-13 17:32:37] apptainer version 1.3.2-1.el7
[2026-03-13 17:32:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 17:32:38] cg-vwn399.simple-grid.lan
[2026-03-13 17:32:38] apptainer works
[2026-03-13 17:32:38] Set ATHENA_PROC_NUMBER=8
[2026-03-13 17:32:38] Set ATHENA_CORE_NUMBER=8
[2026-03-13 17:32:38] Starting ATLAS job with PandaID=7052859385
[2026-03-13 17:32:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 22:35:48]  *** The last 200 lines of the pilot log: ***
[2026-03-13 22:35:48] 2026-03-13 21:34:37,465 | INFO     | job 7052859385 has finished - writing final server update
[2026-03-13 22:35:48] 2026-03-13 21:34:37,465 | INFO     | total number of processed events: 400 (read)
[2026-03-13 22:35:48] 2026-03-13 21:34:37,467 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7052859385/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 22:35:48] 2026-03-13 21:34:37,468 | INFO     | extracted standard info from prmon json
[2026-03-13 22:35:48] 2026-03-13 21:34:37,468 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 22:35:48] 2026-03-13 21:34:37,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 22:35:48] 2026-03-13 21:34:37,469 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 22:35:48] 2026-03-13 21:34:37,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 22:35:48] 2026-03-13 21:34:37,475 | INFO     | fitting pss+swap vs Time
[2026-03-13 22:35:48] 2026-03-13 21:34:37,475 | INFO     | sum of square deviations: 8123493708.0
[2026-03-13 22:35:48] 2026-03-13 21:34:37,479 | INFO     | sum of deviations: 6939818781.000015
[2026-03-13 22:35:48] 2026-03-13 21:34:37,479 | INFO     | mean x: 1773428634.0
[2026-03-13 22:35:48] 2026-03-13 21:34:37,479 | INFO     | mean y: 2468339.797979798
[2026-03-13 22:35:48] 2026-03-13 21:34:37,479 | INFO     | intersect: -1512553864.1185722
[2026-03-13 22:35:48] 2026-03-13 21:34:37,480 | INFO     | chi2: 4.4436862103791555
[2026-03-13 22:35:48] 2026-03-13 21:34:37,480 | INFO     | sum of square deviations: 7720081493.0
[2026-03-13 22:35:48] 2026-03-13 21:34:37,483 | INFO     | sum of deviations: 46810840690.99999
[2026-03-13 22:35:48] 2026-03-13 21:34:37,483 | INFO     | mean x: 1773428481.5
[2026-03-13 22:35:48] 2026-03-13 21:34:37,483 | INFO     | mean y: 2483258.0684931506
[2026-03-13 22:35:48] 2026-03-13 21:34:37,484 | INFO     | intersect: -10750729411.985704
[2026-03-13 22:35:48] 2026-03-13 21:34:37,484 | INFO     | chi2: 2.8303707033506122
[2026-03-13 22:35:48] 2026-03-13 21:34:37,484 | INFO     | current chi2=2.8303707033506122 (change=36.305792773133 %)
[2026-03-13 22:35:48] 2026-03-13 21:34:37,485 | INFO     | sum of square deviations: 7330250928.0
[2026-03-13 22:35:48] 2026-03-13 21:34:37,487 | INFO     | sum of deviations: 45921330882.999985
[2026-03-13 22:35:48] 2026-03-13 21:34:37,488 | INFO     | mean x: 1773428329.0
[2026-03-13 22:35:48] 2026-03-13 21:34:37,488 | INFO     | mean y: 2482910.0662020906
[2026-03-13 22:35:48] 2026-03-13 21:34:37,488 | INFO     | intersect: -11107394486.111082
[2026-03-13 22:35:48] 2026-03-13 21:34:37,489 | INFO     | chi2: 2.831969775055127
[2026-03-13 22:35:48] 2026-03-13 21:34:37,489 | INFO     | current chi2=2.831969775055127 (change=-0.05649689995101724 %)
[2026-03-13 22:35:48] 2026-03-13 21:34:37,489 | INFO     | right removable region: 286
[2026-03-13 22:35:48] 2026-03-13 21:34:37,489 | INFO     | sum of square deviations: 7720081493.0
[2026-03-13 22:35:48] 2026-03-13 21:34:37,492 | INFO     | sum of deviations: -67173428353.5
[2026-03-13 22:35:48] 2026-03-13 21:34:37,493 | INFO     | mean x: 1773428786.5
[2026-03-13 22:35:48] 2026-03-13 21:34:37,493 | INFO     | mean y: 2496267.558219178
[2026-03-13 22:35:48] 2026-03-13 21:34:37,493 | INFO     | intersect: 15433329690.49657
[2026-03-13 22:35:48] 2026-03-13 21:34:37,494 | INFO     | chi2: 1.8926931504577886
[2026-03-13 22:35:48] 2026-03-13 21:34:37,494 | INFO     | current chi2=1.8926931504577886 (change=57.407137658887585 %)
[2026-03-13 22:35:48] 2026-03-13 21:34:37,494 | INFO     | sum of square deviations: 7330250928.0
[2026-03-13 22:35:48] 2026-03-13 21:34:37,497 | INFO     | sum of deviations: -75397106479.00003
[2026-03-13 22:35:48] 2026-03-13 21:34:37,497 | INFO     | mean x: 1773428939.0
[2026-03-13 22:35:48] 2026-03-13 21:34:37,497 | INFO     | mean y: 2499464.1951219514
[2026-03-13 22:35:48] 2026-03-13 21:34:37,498 | INFO     | intersect: 18243540850.10101
[2026-03-13 22:35:48] 2026-03-13 21:34:37,498 | INFO     | chi2: 1.8346243035910477
[2026-03-13 22:35:48] 2026-03-13 21:34:37,498 | INFO     | current chi2=1.8346243035910477 (change=3.068053944861361 %)
[2026-03-13 22:35:48] 2026-03-13 21:34:37,498 | INFO     | left removable region: 20
[2026-03-13 22:35:48] 2026-03-13 21:34:37,499 | INFO     | sum of square deviations: 5836025702.5
[2026-03-13 22:35:48] 2026-03-13 21:34:37,501 | INFO     | sum of deviations: -20114259621.000004
[2026-03-13 22:35:48] 2026-03-13 21:34:37,502 | INFO     | mean x: 1773428908.5
[2026-03-13 22:35:48] 2026-03-13 21:34:37,502 | INFO     | mean y: 2509100.4060150376
[2026-03-13 22:35:48] 2026-03-13 21:34:37,502 | INFO     | intersect: 6114752483.719947
[2026-03-13 22:35:48] 2026-03-13 21:34:37,502 | INFO     | chi2: 0.12240872384558149
[2026-03-13 22:35:48] 2026-03-13 21:34:37,503 | INFO     | current memory leak: -3.45 B/s (using 266 data points, chi2=0.12)
[2026-03-13 22:35:48] 2026-03-13 21:34:37,503 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-13 22:35:48] 2026-03-13 21:34:37,504 | INFO     | ..............................
[2026-03-13 22:35:48] 2026-03-13 21:34:37,504 | INFO     | . Timing measurements:
[2026-03-13 22:35:48] 2026-03-13 21:34:37,504 | INFO     | . get job = 0 s
[2026-03-13 22:35:48] 2026-03-13 21:34:37,504 | INFO     | . initial setup = 8 s
[2026-03-13 22:35:48] 2026-03-13 21:34:37,504 | INFO     | . payload setup = 10 s
[2026-03-13 22:35:48] 2026-03-13 21:34:37,504 | INFO     | . stage-in = 0 s
[2026-03-13 22:35:48] 2026-03-13 21:34:37,504 | INFO     | . payload execution = 18068 s
[2026-03-13 22:35:48] 2026-03-13 21:34:37,504 | INFO     | . stage-out = 4 s
[2026-03-13 22:35:48] 2026-03-13 21:34:37,504 | INFO     | . log creation = 1 s
[2026-03-13 22:35:48] 2026-03-13 21:34:37,505 | INFO     | ..............................
[2026-03-13 22:35:48] 2026-03-13 21:34:38,058 | INFO     | 
[2026-03-13 22:35:48] 2026-03-13 21:34:38,058 | INFO     | job summary report
[2026-03-13 22:35:48] 2026-03-13 21:34:38,058 | INFO     | --------------------------------------------------
[2026-03-13 22:35:48] 2026-03-13 21:34:38,058 | INFO     | PanDA job id: 7052859385
[2026-03-13 22:35:48] 2026-03-13 21:34:38,059 | INFO     | task id: 48967085
[2026-03-13 22:35:48] 2026-03-13 21:34:38,059 | INFO     | errors: (none)
[2026-03-13 22:35:48] 2026-03-13 21:34:38,059 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 22:35:48] 2026-03-13 21:34:38,059 | INFO     | pilot state: finished 
[2026-03-13 22:35:48] 2026-03-13 21:34:38,059 | INFO     | transexitcode: 0
[2026-03-13 22:35:48] 2026-03-13 21:34:38,059 | INFO     | exeerrorcode: 0
[2026-03-13 22:35:48] 2026-03-13 21:34:38,059 | INFO     | exeerrordiag: 
[2026-03-13 22:35:48] 2026-03-13 21:34:38,059 | INFO     | exitcode: 0
[2026-03-13 22:35:48] 2026-03-13 21:34:38,059 | INFO     | exitmsg: OK
[2026-03-13 22:35:48] 2026-03-13 21:34:38,059 | INFO     | cpuconsumptiontime: 67648 s
[2026-03-13 22:35:48] 2026-03-13 21:34:38,060 | INFO     | nevents: 400
[2026-03-13 22:35:48] 2026-03-13 21:34:38,060 | INFO     | neventsw: 0
[2026-03-13 22:35:48] 2026-03-13 21:34:38,060 | INFO     | pid: 12014
[2026-03-13 22:35:48] 2026-03-13 21:34:38,060 | INFO     | pgrp: 12014
[2026-03-13 22:35:48] 2026-03-13 21:34:38,060 | INFO     | corecount: 8
[2026-03-13 22:35:48] 2026-03-13 21:34:38,060 | INFO     | event service: False
[2026-03-13 22:35:48] 2026-03-13 21:34:38,060 | INFO     | sizes: {0: 2279152, 1: 2280270, 2: 2280270, 18082: 2312556, 18083: 2312555, 18087: 2321637, 18090: 2322015}
[2026-03-13 22:35:48] 2026-03-13 21:34:38,060 | INFO     | --------------------------------------------------
[2026-03-13 22:35:48] 2026-03-13 21:34:38,060 | INFO     | 
[2026-03-13 22:35:48] 2026-03-13 21:34:38,061 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-13 22:35:48] 2026-03-13 21:34:38,091 | INFO     | time since job start (18093s) is within the limit (345600.0s)
[2026-03-13 22:35:48] 2026-03-13 21:34:38,683 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,683 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,683 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,683 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,684 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,684 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,684 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,684 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,684 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,684 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,684 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,684 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,684 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,685 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 22:35:48] 2026-03-13 21:34:38,685 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,685 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 22:35:48] 2026-03-13 21:34:38,685 | INFO     | job 7052859385 has completed (purged errors)
[2026-03-13 22:35:48] 2026-03-13 21:34:38,685 | INFO     | overall cleanup function is called
[2026-03-13 22:35:48] 2026-03-13 21:34:39,694 | INFO     | --- collectZombieJob: --- 10, [12014]
[2026-03-13 22:35:48] 2026-03-13 21:34:39,694 | INFO     | zombie collector waiting for pid 12014
[2026-03-13 22:35:48] 2026-03-13 21:34:39,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 22:35:48] 2026-03-13 21:34:39,695 | INFO     | collected zombie processes
[2026-03-13 22:35:48] 2026-03-13 21:34:39,695 | INFO     | will attempt to kill all subprocesses of pid=12014
[2026-03-13 22:35:48] 2026-03-13 21:34:39,789 | INFO     | process IDs to be killed: [12014] (in reverse order)
[2026-03-13 22:35:48] 2026-03-13 21:34:40,716 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 22:35:48] 2026-03-13 21:34:40,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 22:35:48] 2026-03-13 21:34:40,725 | INFO     | did not find any defunct processes belonging to 12014
[2026-03-13 22:35:48] 2026-03-13 21:34:40,727 | INFO     | did not find any defunct processes belonging to 12014
[2026-03-13 22:35:48] 2026-03-13 21:34:40,727 | INFO     | ready for new job
[2026-03-13 22:35:48] 2026-03-13 21:34:40,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 22:35:48] 2026-03-13 21:34:40,730 | INFO     | **************************************
[2026-03-13 22:35:48] 2026-03-13 21:34:40,730 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 22:35:48] 2026-03-13 21:34:40,730 | INFO     | **************************************
[2026-03-13 22:35:48] 2026-03-13 21:34:40,730 | INFO     | 
[2026-03-13 22:35:48] 2026-03-13 21:34:40,731 | INFO     | pilot is running in a VM
[2026-03-13 22:35:48] 2026-03-13 21:34:40,731 | INFO     | architecture information:
[2026-03-13 22:35:48] 2026-03-13 21:34:40,737 | INFO     | executing command: cat /etc/os-release
[2026-03-13 22:35:48] 2026-03-13 21:34:40,997 | INFO     | cat /etc/os-release:
[2026-03-13 22:35:48] NAME="CentOS Linux"
[2026-03-13 22:35:48] VERSION="7 (Core)"
[2026-03-13 22:35:48] ID="centos"
[2026-03-13 22:35:48] ID_LIKE="rhel fedora"
[2026-03-13 22:35:48] VERSION_ID="7"
[2026-03-13 22:35:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 22:35:48] ANSI_COLOR="0;31"
[2026-03-13 22:35:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 22:35:48] HOME_URL="https://www.centos.org/"
[2026-03-13 22:35:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 22:35:48] 
[2026-03-13 22:35:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 22:35:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 22:35:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 22:35:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 22:35:48] 
[2026-03-13 22:35:48] 2026-03-13 21:34:40,997 | INFO     | **************************************
[2026-03-13 22:35:48] 2026-03-13 21:34:41,500 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-13 22:35:48] 2026-03-13 21:34:41,646 | INFO     | sufficient remaining disk space (495414411264 B)
[2026-03-13 22:35:48] 2026-03-13 21:34:41,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 22:35:48] 2026-03-13 21:34:41,647 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 22:35:48] 2026-03-13 21:34:41,647 | INFO     | update_server=False
[2026-03-13 22:35:48] 2026-03-13 21:34:41,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 22:35:48] 2026-03-13 21:34:41,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 22:35:48] 2026-03-13 21:34:41,649 | INFO     | aborting loop
[2026-03-13 22:35:48] 2026-03-13 21:34:42,007 | INFO     | all data control threads have been joined
[2026-03-13 22:35:48] 2026-03-13 21:34:42,274 | INFO     | all job control threads have been joined
[2026-03-13 22:35:48] 2026-03-13 21:34:42,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 22:35:48] 2026-03-13 21:34:42,528 | INFO     | all payload control threads have been joined
[2026-03-13 22:35:48] 2026-03-13 21:34:42,637 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 22:35:48] 2026-03-13 21:34:42,653 | INFO     | [job] retrieve thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:42,654 | INFO     | [job] job monitor thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:43,013 | INFO     | [data] control thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:43,135 | INFO     | [data] copytool_in thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:43,136 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:43,146 | INFO     | [job] validate thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:43,280 | INFO     | [job] control thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:43,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 22:35:48] 2026-03-13 21:34:43,502 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:43,534 | INFO     | [payload] control thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:43,549 | INFO     | [payload] failed_post thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:43,644 | INFO     | [job] queue monitor thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:43,871 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:43,892 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:43,926 | INFO     | [payload] validate_post thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:44,457 | INFO     | [data] copytool_out thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:34:47,486 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 22:35:48] 2026-03-13 21:35:11,225 | INFO     | PID=7586 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 22:35:48] 2026-03-13 21:35:11,225 | INFO     | .. there are 2 such processes running
[2026-03-13 22:35:48] 2026-03-13 21:35:11,225 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 22:35:48] 2026-03-13 21:35:11,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 22:35:48] 2026-03-13 21:35:11,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 22:35:48] 2026-03-13 21:35:36,684 | INFO     | [monitor] cgroup control has ended
[2026-03-13 22:35:48] 2026-03-13 21:35:37,692 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686822569792)>', '<ExcThread(monitor, started 140685797742336)>']
[2026-03-13 22:35:48] 2026-03-13 21:35:38,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 22:35:48] 2026-03-13 21:35:38,386 | INFO     | [monitor] control thread has ended
[2026-03-13 22:35:48] 2026-03-13 21:35:42,718 | INFO     | all workflow threads have been joined
[2026-03-13 22:35:48] 2026-03-13 21:35:42,718 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 22:35:48] 2026-03-13 21:35:42,719 | INFO     | traces error code: 0
[2026-03-13 22:35:48] 2026-03-13 21:35:42,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 22:35:48] 2026-03-13 21:35:42,997 [wrapper] ==== pilot stdout END ====
[2026-03-13 22:35:48] 2026-03-13 21:35:43,116 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 22:35:48] 2026-03-13 21:35:43,272 [wrapper] pilotpid: 7586
[2026-03-13 22:35:48] 2026-03-13 21:35:43,390 [wrapper] Pilot exit status: 0
[2026-03-13 22:35:48] 2026-03-13 21:35:43,776 [wrapper] pandaids: 7052859385
[2026-03-13 22:35:48] 2026-03-13 21:35:44,577 [wrapper] cleanup supervisor_pilot 19535 7587
[2026-03-13 22:35:48] 2026-03-13 21:35:44,701 [wrapper] Test setup, not cleaning
[2026-03-13 22:35:48] 2026-03-13 21:35:44,800 [wrapper] apfmon messages muted
[2026-03-13 22:35:48] 2026-03-13 21:35:44,868 [wrapper] ==== wrapper stdout END ====
[2026-03-13 22:35:48] 2026-03-13 21:35:44,944 [wrapper] ==== wrapper stderr END ====
[2026-03-13 22:35:48]  *** Error codes and diagnostics ***
[2026-03-13 22:35:48]     "exeErrorCode": 0,
[2026-03-13 22:35:48]     "exeErrorDiag": "",
[2026-03-13 22:35:48]     "pilotErrorCode": 0,
[2026-03-13 22:35:48]     "pilotErrorDiag": "",
[2026-03-13 22:35:48]  *** Listing of results directory ***
[2026-03-13 22:35:48] total 408400
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc    585013 Mar 13 04:13 pilot3.tar.gz
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc      5111 Mar 13 04:13 queuedata.json
[2026-03-13 22:35:48] -rwx------. 1 boinc boinc     36322 Mar 13 04:13 runpilot2-wrapper.sh
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc       100 Mar 13 17:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 22:35:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 17:32 run_atlas
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc       105 Mar 13 17:32 job.xml
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc      6392 Mar 13 17:32 init_data.xml
[2026-03-13 22:35:48] -rw-r--r--. 2 boinc boinc 211948145 Mar 13 17:32 EVNT.48967083._000672.pool.root.1
[2026-03-13 22:35:48] -rw-r--r--. 2 boinc boinc     15845 Mar 13 17:32 start_atlas.sh
[2026-03-13 22:35:48] drwxrwx--x. 2 boinc boinc        68 Mar 13 17:32 shared
[2026-03-13 22:35:48] -rw-r--r--. 2 boinc boinc    597518 Mar 13 17:32 input.tar.gz
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc         0 Mar 13 17:32 boinc_lockfile
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc      2563 Mar 13 17:32 pandaJob.out
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc   1006597 Mar 13 17:32 agis_schedconf.cvmfs.json
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc       415 Mar 13 17:33 workernode_map.json
[2026-03-13 22:35:48] drwx------. 5 boinc boinc      4096 Mar 13 17:33 pilot3
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc 196260479 Mar 13 22:33 HITS.48967085._016750.pool.root.1
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc       530 Mar 13 22:33 boinc_task_state.xml
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc        95 Mar 13 22:34 pilot_heartbeat.json
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc      1013 Mar 13 22:34 memory_monitor_summary.json
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc   1511579 Mar 13 22:34 agis_ddmendpoints.agis.ALL.json
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc    504295 Mar 13 22:34 log.48967085._016750.job.log.tgz.1
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc      6309 Mar 13 22:34 heartbeat.json
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc      8192 Mar 13 22:35 boinc_mmap_file
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc        28 Mar 13 22:35 wrapper_checkpoint.txt
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc      4879 Mar 13 22:35 pilotlog.txt
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc   2529381 Mar 13 22:35 log.48967085._016750.job.log.1
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc       357 Mar 13 22:35 output.list
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc       620 Mar 13 22:35 runtime_log
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc   3051520 Mar 13 22:35 result.tar.gz
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc      8816 Mar 13 22:35 runtime_log.err
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc       655 Mar 13 22:35 fqhLDmk87K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3OoLDmjEQJPn.diag
[2026-03-13 22:35:48] -rw-r--r--. 1 boinc boinc     20723 Mar 13 22:35 stderr.txt
[2026-03-13 22:35:48] HITS file was successfully produced:
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc 196260479 Mar 13 22:33 shared/HITS.pool.root.1
[2026-03-13 22:35:48]  *** Contents of shared directory: ***
[2026-03-13 22:35:48] total 402228
[2026-03-13 22:35:48] -rw-r--r--. 2 boinc boinc 211948145 Mar 13 17:32 ATLAS.root_0
[2026-03-13 22:35:48] -rw-r--r--. 2 boinc boinc     15845 Mar 13 17:32 start_atlas.sh
[2026-03-13 22:35:48] -rw-r--r--. 2 boinc boinc    597518 Mar 13 17:32 input.tar.gz
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc 196260479 Mar 13 22:33 HITS.pool.root.1
[2026-03-13 22:35:48] -rw-------. 1 boinc boinc   3051520 Mar 13 22:35 result.tar.gz
22:35:49 (3713): run_atlas exited; CPU time 67838.919661
22:35:49 (3713): called boinc_finish(0)

</stderr_txt>
]]>

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