Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:12:56 (5650): wrapper (7.7.26015): starting
11:12:56 (5650): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 11:12:56] Arguments: --nthreads 8
[2026-03-13 11:12:56] Threads: 8
[2026-03-13 11:12:56] Checking for CVMFS
[2026-03-13 11:12:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 11:12:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 11:12:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 11:12:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 11:12:59] 2.11.2.0 28971 126000 105740 157234 1 94 20037622 25165824 1081 130560 153 43893166 99.845 30150794 1073 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 11:12:59] CVMFS is ok
[2026-03-13 11:12:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 11:12:59] Checking for apptainer binary...
[2026-03-13 11:12:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 11:12:59] Running /usr/bin/apptainer --version
[2026-03-13 11:12:59] apptainer version 1.3.2-1.el7
[2026-03-13 11:12:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 11:13:29] cg-vwn489.simple-grid.lan
[2026-03-13 11:13:29] apptainer works
[2026-03-13 11:13:29] Set ATHENA_PROC_NUMBER=8
[2026-03-13 11:13:29] Set ATHENA_CORE_NUMBER=8
[2026-03-13 11:13:29] Starting ATLAS job with PandaID=7043550216
[2026-03-13 11:13:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 15:02:57]  *** The last 200 lines of the pilot log: ***
[2026-03-13 15:02:57] 2026-03-13 14:02:17,183 | INFO     | total number of processed events: 400 (read)
[2026-03-13 15:02:57] 2026-03-13 14:02:17,185 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7043550216/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 15:02:57] 2026-03-13 14:02:17,186 | INFO     | extracted standard info from prmon json
[2026-03-13 15:02:57] 2026-03-13 14:02:17,186 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 15:02:57] 2026-03-13 14:02:17,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 15:02:57] 2026-03-13 14:02:17,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 15:02:57] 2026-03-13 14:02:17,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 15:02:57] 2026-03-13 14:02:17,197 | INFO     | fitting pss+swap vs Time
[2026-03-13 15:02:57] 2026-03-13 14:02:17,198 | INFO     | sum of square deviations: 3038856977.5
[2026-03-13 15:02:57] 2026-03-13 14:02:17,200 | INFO     | sum of deviations: 83823539881.49998
[2026-03-13 15:02:57] 2026-03-13 14:02:17,200 | INFO     | mean x: 1773404006.5
[2026-03-13 15:02:57] 2026-03-13 14:02:17,200 | INFO     | mean y: 2418353.023364486
[2026-03-13 15:02:57] 2026-03-13 14:02:17,200 | INFO     | intersect: -48914987949.90772
[2026-03-13 15:02:57] 2026-03-13 14:02:17,200 | INFO     | chi2: 8.591479459694224
[2026-03-13 15:02:57] 2026-03-13 14:02:17,201 | INFO     | sum of square deviations: 2830787960.0
[2026-03-13 15:02:57] 2026-03-13 14:02:17,202 | INFO     | sum of deviations: 95838693625.0
[2026-03-13 15:02:57] 2026-03-13 14:02:17,203 | INFO     | mean x: 1773403854.0
[2026-03-13 15:02:57] 2026-03-13 14:02:17,203 | INFO     | mean y: 2426963.248803828
[2026-03-13 15:02:57] 2026-03-13 14:02:17,203 | INFO     | intersect: -60037643518.36376
[2026-03-13 15:02:57] 2026-03-13 14:02:17,203 | INFO     | chi2: 7.913510666983783
[2026-03-13 15:02:57] 2026-03-13 14:02:17,203 | INFO     | current chi2=7.913510666983783 (change=7.891176320574823 %)
[2026-03-13 15:02:57] 2026-03-13 14:02:17,203 | INFO     | right removable region: 208
[2026-03-13 15:02:57] 2026-03-13 14:02:17,204 | INFO     | sum of square deviations: 2830787960.0
[2026-03-13 15:02:57] 2026-03-13 14:02:17,205 | INFO     | sum of deviations: 10481252654.000004
[2026-03-13 15:02:57] 2026-03-13 14:02:17,205 | INFO     | mean x: 1773404159.0
[2026-03-13 15:02:57] 2026-03-13 14:02:17,206 | INFO     | mean y: 2472063.1818181816
[2026-03-13 15:02:57] 2026-03-13 14:02:17,206 | INFO     | intersect: -6563719863.158505
[2026-03-13 15:02:57] 2026-03-13 14:02:17,206 | INFO     | chi2: 3.519877557390248
[2026-03-13 15:02:57] 2026-03-13 14:02:17,206 | INFO     | current chi2=3.519877557390248 (change=59.03060033020759 %)
[2026-03-13 15:02:57] 2026-03-13 14:02:17,207 | INFO     | sum of square deviations: 2632440055.0
[2026-03-13 15:02:57] 2026-03-13 14:02:17,208 | INFO     | sum of deviations: -41991502171.5
[2026-03-13 15:02:57] 2026-03-13 14:02:17,208 | INFO     | mean x: 1773404311.5
[2026-03-13 15:02:57] 2026-03-13 14:02:17,208 | INFO     | mean y: 2512311.004901961
[2026-03-13 15:02:57] 2026-03-13 14:02:17,208 | INFO     | intersect: 28291061885.32739
[2026-03-13 15:02:57] 2026-03-13 14:02:17,209 | INFO     | chi2: 1.0486898468547103
[2026-03-13 15:02:57] 2026-03-13 14:02:17,209 | INFO     | current chi2=1.0486898468547103 (change=70.20663844817821 %)
[2026-03-13 15:02:57] 2026-03-13 14:02:17,209 | INFO     | sum of square deviations: 2443580700.0
[2026-03-13 15:02:57] 2026-03-13 14:02:17,211 | INFO     | sum of deviations: -47278203963.99999
[2026-03-13 15:02:57] 2026-03-13 14:02:17,211 | INFO     | mean x: 1773404464.0
[2026-03-13 15:02:57] 2026-03-13 14:02:17,211 | INFO     | mean y: 2516500.2311557787
[2026-03-13 15:02:57] 2026-03-13 14:02:17,211 | INFO     | intersect: 34314204245.86611
[2026-03-13 15:02:57] 2026-03-13 14:02:17,219 | INFO     | chi2: 0.957449066345325
[2026-03-13 15:02:57] 2026-03-13 14:02:17,220 | INFO     | current chi2=0.957449066345325 (change=8.700454265199555 %)
[2026-03-13 15:02:57] 2026-03-13 14:02:17,220 | INFO     | left removable region: 30
[2026-03-13 15:02:57] 2026-03-13 14:02:17,220 | INFO     | sum of square deviations: 1748737904.5
[2026-03-13 15:02:57] 2026-03-13 14:02:17,221 | INFO     | sum of deviations: -13912959788.000002
[2026-03-13 15:02:57] 2026-03-13 14:02:17,222 | INFO     | mean x: 1773404738.5
[2026-03-13 15:02:57] 2026-03-13 14:02:17,222 | INFO     | mean y: 2510231.9775280897
[2026-03-13 15:02:57] 2026-03-13 14:02:17,222 | INFO     | intersect: 14111719365.666296
[2026-03-13 15:02:57] 2026-03-13 14:02:17,222 | INFO     | chi2: 0.11034813057522083
[2026-03-13 15:02:57] 2026-03-13 14:02:17,222 | INFO     | current memory leak: -7.96 B/s (using 178 data points, chi2=0.11)
[2026-03-13 15:02:57] 2026-03-13 14:02:17,223 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-03-13 15:02:57] 2026-03-13 14:02:17,223 | INFO     | ..............................
[2026-03-13 15:02:57] 2026-03-13 14:02:17,223 | INFO     | . Timing measurements:
[2026-03-13 15:02:57] 2026-03-13 14:02:17,223 | INFO     | . get job = 0 s
[2026-03-13 15:02:57] 2026-03-13 14:02:17,223 | INFO     | . initial setup = 122 s
[2026-03-13 15:02:57] 2026-03-13 14:02:17,223 | INFO     | . payload setup = 158 s
[2026-03-13 15:02:57] 2026-03-13 14:02:17,224 | INFO     | . stage-in = 0 s
[2026-03-13 15:02:57] 2026-03-13 14:02:17,224 | INFO     | . payload execution = 13165 s
[2026-03-13 15:02:57] 2026-03-13 14:02:17,224 | INFO     | . stage-out = 4 s
[2026-03-13 15:02:57] 2026-03-13 14:02:17,224 | INFO     | . log creation = 1 s
[2026-03-13 15:02:57] 2026-03-13 14:02:17,224 | INFO     | ..............................
[2026-03-13 15:02:57] 2026-03-13 14:02:17,798 | INFO     | 
[2026-03-13 15:02:57] 2026-03-13 14:02:17,798 | INFO     | job summary report
[2026-03-13 15:02:57] 2026-03-13 14:02:17,799 | INFO     | --------------------------------------------------
[2026-03-13 15:02:57] 2026-03-13 14:02:17,799 | INFO     | PanDA job id: 7043550216
[2026-03-13 15:02:57] 2026-03-13 14:02:17,799 | INFO     | task id: 48955006
[2026-03-13 15:02:57] 2026-03-13 14:02:17,799 | INFO     | errors: (none)
[2026-03-13 15:02:57] 2026-03-13 14:02:17,799 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 15:02:57] 2026-03-13 14:02:17,799 | INFO     | pilot state: finished 
[2026-03-13 15:02:57] 2026-03-13 14:02:17,799 | INFO     | transexitcode: 0
[2026-03-13 15:02:57] 2026-03-13 14:02:17,799 | INFO     | exeerrorcode: 0
[2026-03-13 15:02:57] 2026-03-13 14:02:17,799 | INFO     | exeerrordiag: 
[2026-03-13 15:02:57] 2026-03-13 14:02:17,800 | INFO     | exitcode: 0
[2026-03-13 15:02:57] 2026-03-13 14:02:17,800 | INFO     | exitmsg: OK
[2026-03-13 15:02:57] 2026-03-13 14:02:17,800 | INFO     | cpuconsumptiontime: 47315 s
[2026-03-13 15:02:57] 2026-03-13 14:02:17,800 | INFO     | nevents: 400
[2026-03-13 15:02:57] 2026-03-13 14:02:17,800 | INFO     | neventsw: 0
[2026-03-13 15:02:57] 2026-03-13 14:02:17,800 | INFO     | pid: 14098
[2026-03-13 15:02:57] 2026-03-13 14:02:17,800 | INFO     | pgrp: 14098
[2026-03-13 15:02:57] 2026-03-13 14:02:17,800 | INFO     | corecount: 8
[2026-03-13 15:02:57] 2026-03-13 14:02:17,800 | INFO     | event service: False
[2026-03-13 15:02:57] 2026-03-13 14:02:17,800 | INFO     | sizes: {0: 2279744, 1: 2280261, 2: 2280261, 13327: 2310412, 13332: 2319606}
[2026-03-13 15:02:57] 2026-03-13 14:02:17,801 | INFO     | --------------------------------------------------
[2026-03-13 15:02:57] 2026-03-13 14:02:17,801 | INFO     | 
[2026-03-13 15:02:57] 2026-03-13 14:02:17,801 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-13 15:02:57] 2026-03-13 14:02:18,347 | INFO     | time since job start (13336s) is within the limit (345600.0s)
[2026-03-13 15:02:57] 2026-03-13 14:02:18,415 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,415 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,415 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,415 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,417 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 15:02:57] 2026-03-13 14:02:18,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,417 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 15:02:57] 2026-03-13 14:02:18,417 | INFO     | job 7043550216 has completed (purged errors)
[2026-03-13 15:02:57] 2026-03-13 14:02:18,417 | INFO     | overall cleanup function is called
[2026-03-13 15:02:57] 2026-03-13 14:02:19,426 | INFO     | --- collectZombieJob: --- 10, [14098]
[2026-03-13 15:02:57] 2026-03-13 14:02:19,426 | INFO     | zombie collector waiting for pid 14098
[2026-03-13 15:02:57] 2026-03-13 14:02:19,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 15:02:57] 2026-03-13 14:02:19,427 | INFO     | collected zombie processes
[2026-03-13 15:02:57] 2026-03-13 14:02:19,427 | INFO     | will attempt to kill all subprocesses of pid=14098
[2026-03-13 15:02:57] 2026-03-13 14:02:19,512 | INFO     | process IDs to be killed: [14098] (in reverse order)
[2026-03-13 15:02:57] 2026-03-13 14:02:19,862 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 15:02:57] 2026-03-13 14:02:19,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 15:02:57] 2026-03-13 14:02:19,870 | INFO     | did not find any defunct processes belonging to 14098
[2026-03-13 15:02:57] 2026-03-13 14:02:19,873 | INFO     | did not find any defunct processes belonging to 14098
[2026-03-13 15:02:57] 2026-03-13 14:02:19,873 | INFO     | ready for new job
[2026-03-13 15:02:57] 2026-03-13 14:02:19,873 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 15:02:57] 2026-03-13 14:02:19,875 | INFO     | **************************************
[2026-03-13 15:02:57] 2026-03-13 14:02:19,875 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 15:02:57] 2026-03-13 14:02:19,875 | INFO     | **************************************
[2026-03-13 15:02:57] 2026-03-13 14:02:19,876 | INFO     | 
[2026-03-13 15:02:57] 2026-03-13 14:02:19,876 | INFO     | pilot is running in a VM
[2026-03-13 15:02:57] 2026-03-13 14:02:19,876 | INFO     | architecture information:
[2026-03-13 15:02:57] 2026-03-13 14:02:19,887 | INFO     | executing command: cat /etc/os-release
[2026-03-13 15:02:57] 2026-03-13 14:02:20,175 | INFO     | cat /etc/os-release:
[2026-03-13 15:02:57] NAME="CentOS Linux"
[2026-03-13 15:02:57] VERSION="7 (Core)"
[2026-03-13 15:02:57] ID="centos"
[2026-03-13 15:02:57] ID_LIKE="rhel fedora"
[2026-03-13 15:02:57] VERSION_ID="7"
[2026-03-13 15:02:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 15:02:57] ANSI_COLOR="0;31"
[2026-03-13 15:02:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 15:02:57] HOME_URL="https://www.centos.org/"
[2026-03-13 15:02:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 15:02:57] 
[2026-03-13 15:02:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 15:02:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 15:02:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 15:02:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 15:02:57] 
[2026-03-13 15:02:57] 2026-03-13 14:02:20,175 | INFO     | **************************************
[2026-03-13 15:02:57] 2026-03-13 14:02:20,678 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-13 15:02:57] 2026-03-13 14:02:20,930 | INFO     | sufficient remaining disk space (495867396096 B)
[2026-03-13 15:02:57] 2026-03-13 14:02:20,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 15:02:57] 2026-03-13 14:02:20,930 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 15:02:57] 2026-03-13 14:02:20,930 | INFO     | update_server=False
[2026-03-13 15:02:57] 2026-03-13 14:02:20,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 15:02:57] 2026-03-13 14:02:20,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 15:02:57] 2026-03-13 14:02:20,935 | INFO     | aborting loop
[2026-03-13 15:02:57] 2026-03-13 14:02:21,713 | INFO     | all data control threads have been joined
[2026-03-13 15:02:57] 2026-03-13 14:02:21,936 | INFO     | [job] retrieve thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:21,940 | INFO     | [job] job monitor thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:22,003 | INFO     | all payload control threads have been joined
[2026-03-13 15:02:57] 2026-03-13 14:02:22,046 | INFO     | [data] copytool_in thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:22,256 | INFO     | [job] validate thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:22,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 15:02:57] 2026-03-13 14:02:22,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 15:02:57] 2026-03-13 14:02:22,500 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:22,515 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:22,546 | INFO     | all job control threads have been joined
[2026-03-13 15:02:57] 2026-03-13 14:02:22,667 | INFO     | [payload] failed_post thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:22,719 | INFO     | [data] control thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:22,811 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:23,009 | INFO     | [payload] control thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:23,187 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:23,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 15:02:57] 2026-03-13 14:02:23,258 | INFO     | [payload] validate_post thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:23,402 | INFO     | [job] queue monitor thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:23,552 | INFO     | [job] control thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:24,332 | INFO     | [data] copytool_out thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:24,767 | INFO     | [monitor] cgroup control has ended
[2026-03-13 15:02:57] 2026-03-13 14:02:27,206 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 15:02:57] 2026-03-13 14:02:28,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140000664119104)>', '<ExcThread(monitor, started 140000079369984)>']
[2026-03-13 15:02:57] 2026-03-13 14:02:33,057 | INFO     | all workflow threads have been joined
[2026-03-13 15:02:57] 2026-03-13 14:02:33,058 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 15:02:57] 2026-03-13 14:02:33,058 | INFO     | traces error code: 0
[2026-03-13 15:02:57] 2026-03-13 14:02:33,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 15:02:57] 2026-03-13 14:02:51,476 | INFO     | PID=9643 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 15:02:57] 2026-03-13 14:02:51,476 | INFO     | .. there are 2 such processes running
[2026-03-13 15:02:57] 2026-03-13 14:02:51,477 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 15:02:57] 2026-03-13 14:02:51,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 15:02:57] 2026-03-13 14:02:51,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 15:02:57] 2026-03-13 14:02:51,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 15:02:57] 2026-03-13 14:02:51,478 | CRITICAL | thread 'MainThread' is not alive
[2026-03-13 15:02:57] 2026-03-13 14:02:51,478 | INFO     | [monitor] control thread has ended
[2026-03-13 15:02:57] 2026-03-13 14:02:51,962 [wrapper] ==== pilot stdout END ====
[2026-03-13 15:02:57] 2026-03-13 14:02:52,077 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 15:02:57] 2026-03-13 14:02:52,163 [wrapper] pilotpid: 9643
[2026-03-13 15:02:57] 2026-03-13 14:02:52,260 [wrapper] Pilot exit status: 0
[2026-03-13 15:02:57] 2026-03-13 14:02:52,844 [wrapper] pandaids: 7043550216
[2026-03-13 15:02:57] 2026-03-13 14:02:53,668 [wrapper] cleanup supervisor_pilot 20845 9644
[2026-03-13 15:02:57] 2026-03-13 14:02:53,772 [wrapper] Test setup, not cleaning
[2026-03-13 15:02:57] 2026-03-13 14:02:53,885 [wrapper] apfmon messages muted
[2026-03-13 15:02:57] 2026-03-13 14:02:53,984 [wrapper] ==== wrapper stdout END ====
[2026-03-13 15:02:57] 2026-03-13 14:02:54,093 [wrapper] ==== wrapper stderr END ====
[2026-03-13 15:02:57]  *** Error codes and diagnostics ***
[2026-03-13 15:02:57]     "exeErrorCode": 0,
[2026-03-13 15:02:57]     "exeErrorDiag": "",
[2026-03-13 15:02:57]     "pilotErrorCode": 0,
[2026-03-13 15:02:57]     "pilotErrorDiag": "",
[2026-03-13 15:02:57]  *** Listing of results directory ***
[2026-03-13 15:02:57] total 608856
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc    585013 Mar 12 20:59 pilot3.tar.gz
[2026-03-13 15:02:57] -rwx------. 1 boinc boinc     36322 Mar 12 21:02 runpilot2-wrapper.sh
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc      5111 Mar 12 21:04 queuedata.json
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc       100 Mar 13 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 15:02:57] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 11:12 run_atlas
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc       105 Mar 13 11:12 job.xml
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc      6391 Mar 13 11:12 init_data.xml
[2026-03-13 15:02:57] -rw-r--r--. 2 boinc boinc 436976988 Mar 13 11:12 EVNT.46701403._000941.pool.root.1
[2026-03-13 15:02:57] -rw-r--r--. 2 boinc boinc     15845 Mar 13 11:12 start_atlas.sh
[2026-03-13 15:02:57] drwxrwx--x. 2 boinc boinc        68 Mar 13 11:12 shared
[2026-03-13 15:02:57] -rw-r--r--. 2 boinc boinc    597531 Mar 13 11:12 input.tar.gz
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc         0 Mar 13 11:12 boinc_lockfile
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc      2565 Mar 13 11:13 pandaJob.out
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc       415 Mar 13 11:19 workernode_map.json
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc   1006495 Mar 13 11:20 agis_schedconf.cvmfs.json
[2026-03-13 15:02:57] drwx------. 5 boinc boinc      4096 Mar 13 11:20 pilot3
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc 177867363 Mar 13 15:00 HITS.48955006._047542.pool.root.1
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc       531 Mar 13 15:01 boinc_task_state.xml
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc      1012 Mar 13 15:02 memory_monitor_summary.json
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc   1511578 Mar 13 15:02 agis_ddmendpoints.agis.ALL.json
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc    470660 Mar 13 15:02 log.48955006._047542.job.log.tgz.1
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc      6323 Mar 13 15:02 heartbeat.json
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc      8192 Mar 13 15:02 boinc_mmap_file
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc        28 Mar 13 15:02 wrapper_checkpoint.txt
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc        95 Mar 13 15:02 pilot_heartbeat.json
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc       889 Mar 13 15:02 pilotlog.txt
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc   1882880 Mar 13 15:02 log.48955006._047542.job.log.1
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc       357 Mar 13 15:02 output.list
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc       620 Mar 13 15:02 runtime_log
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc   2375680 Mar 13 15:02 result.tar.gz
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc      8832 Mar 13 15:02 runtime_log.err
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc       656 Mar 13 15:02 ex4NDm9P1K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYinLDm9qaUdm.diag
[2026-03-13 15:02:57] -rw-r--r--. 1 boinc boinc     20659 Mar 13 15:02 stderr.txt
[2026-03-13 15:02:57] HITS file was successfully produced:
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc 177867363 Mar 13 15:00 shared/HITS.pool.root.1
[2026-03-13 15:02:57]  *** Contents of shared directory: ***
[2026-03-13 15:02:57] total 603356
[2026-03-13 15:02:57] -rw-r--r--. 2 boinc boinc 436976988 Mar 13 11:12 ATLAS.root_0
[2026-03-13 15:02:57] -rw-r--r--. 2 boinc boinc     15845 Mar 13 11:12 start_atlas.sh
[2026-03-13 15:02:57] -rw-r--r--. 2 boinc boinc    597531 Mar 13 11:12 input.tar.gz
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc 177867363 Mar 13 15:00 HITS.pool.root.1
[2026-03-13 15:02:57] -rw-------. 1 boinc boinc   2375680 Mar 13 15:02 result.tar.gz
15:02:59 (5650): run_atlas exited; CPU time 47455.824816
15:02:59 (5650): called boinc_finish(0)

</stderr_txt>
]]>

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