Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:29:32 (21651): wrapper (7.7.26015): starting
16:29:32 (21651): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 16:29:32] Arguments: --nthreads 8
[2026-03-13 16:29:32] Threads: 8
[2026-03-13 16:29:32] Checking for CVMFS
[2026-03-13 16:29:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 16:29:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 16:29:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 16:29:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 16:29:36] 2.11.2.0 24551 126315 109208 157242 0 54 14855374 25165825 4466 130560 161 38224948 99.833 26609191 899 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 16:29:36] CVMFS is ok
[2026-03-13 16:29:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 16:29:36] Checking for apptainer binary...
[2026-03-13 16:29:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 16:29:36] Running /usr/bin/apptainer --version
[2026-03-13 16:29:37] apptainer version 1.3.2-1.el7
[2026-03-13 16:29:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 16:29:57] cg-vwn415.simple-grid.lan
[2026-03-13 16:29:57] apptainer works
[2026-03-13 16:29:57] Set ATHENA_PROC_NUMBER=8
[2026-03-13 16:29:57] Set ATHENA_CORE_NUMBER=8
[2026-03-13 16:29:57] Starting ATLAS job with PandaID=7043586983
[2026-03-13 16:29:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 20:20:39]  *** The last 200 lines of the pilot log: ***
[2026-03-13 20:20:39] 2026-03-13 19:19:37,189 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7043586983/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 20:20:39] 2026-03-13 19:19:37,190 | INFO     | extracted standard info from prmon json
[2026-03-13 20:20:39] 2026-03-13 19:19:37,190 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 20:20:39] 2026-03-13 19:19:37,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 20:20:39] 2026-03-13 19:19:37,190 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 20:20:39] 2026-03-13 19:19:37,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 20:20:39] 2026-03-13 19:19:37,195 | INFO     | fitting pss+swap vs Time
[2026-03-13 20:20:39] 2026-03-13 19:19:37,196 | INFO     | sum of square deviations: 3168461268.0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,198 | INFO     | sum of deviations: 62668483285.0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,198 | INFO     | mean x: 1773422969.0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,198 | INFO     | mean y: 2443370.732718894
[2026-03-13 20:20:39] 2026-03-13 19:19:37,198 | INFO     | intersect: -35073802885.597275
[2026-03-13 20:20:39] 2026-03-13 19:19:37,199 | INFO     | chi2: 5.730470273886342
[2026-03-13 20:20:39] 2026-03-13 19:19:37,199 | INFO     | sum of square deviations: 2954447953.0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,201 | INFO     | sum of deviations: 75402712836.50002
[2026-03-13 20:20:39] 2026-03-13 19:19:37,201 | INFO     | mean x: 1773422816.5
[2026-03-13 20:20:39] 2026-03-13 19:19:37,201 | INFO     | mean y: 2452255.2783018867
[2026-03-13 20:20:39] 2026-03-13 19:19:37,202 | INFO     | intersect: -45258419994.80277
[2026-03-13 20:20:39] 2026-03-13 19:19:37,202 | INFO     | chi2: 5.012851232668874
[2026-03-13 20:20:39] 2026-03-13 19:19:37,202 | INFO     | current chi2=5.012851232668874 (change=12.522864737430814 %)
[2026-03-13 20:20:39] 2026-03-13 19:19:37,202 | INFO     | right removable region: 211
[2026-03-13 20:20:39] 2026-03-13 19:19:37,203 | INFO     | sum of square deviations: 2954447953.0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,205 | INFO     | sum of deviations: -8950472629.500008
[2026-03-13 20:20:39] 2026-03-13 19:19:37,205 | INFO     | mean x: 1773423121.5
[2026-03-13 20:20:39] 2026-03-13 19:19:37,205 | INFO     | mean y: 2494341.8349056602
[2026-03-13 20:20:39] 2026-03-13 19:19:37,205 | INFO     | intersect: 5375063214.943843
[2026-03-13 20:20:39] 2026-03-13 19:19:37,205 | INFO     | chi2: 1.4237155711013343
[2026-03-13 20:20:39] 2026-03-13 19:19:37,206 | INFO     | current chi2=1.4237155711013343 (change=75.1553449707403 %)
[2026-03-13 20:20:39] 2026-03-13 19:19:37,206 | INFO     | sum of square deviations: 2750295288.0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,208 | INFO     | sum of deviations: -28452095068.0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,208 | INFO     | mean x: 1773423274.0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,208 | INFO     | mean y: 2508760.7584541063
[2026-03-13 20:20:39] 2026-03-13 19:19:37,208 | INFO     | intersect: 18348759727.993435
[2026-03-13 20:20:39] 2026-03-13 19:19:37,209 | INFO     | chi2: 0.9073343341568144
[2026-03-13 20:20:39] 2026-03-13 19:19:37,209 | INFO     | current chi2=0.9073343341568144 (change=36.26997185575952 %)
[2026-03-13 20:20:39] 2026-03-13 19:19:37,209 | INFO     | sum of square deviations: 2555770710.5
[2026-03-13 20:20:39] 2026-03-13 19:19:37,211 | INFO     | sum of deviations: -22830764172.5
[2026-03-13 20:20:39] 2026-03-13 19:19:37,211 | INFO     | mean x: 1773423426.5
[2026-03-13 20:20:39] 2026-03-13 19:19:37,211 | INFO     | mean y: 2504337.50990099
[2026-03-13 20:20:39] 2026-03-13 19:19:37,211 | INFO     | intersect: 15844540503.769655
[2026-03-13 20:20:39] 2026-03-13 19:19:37,212 | INFO     | chi2: 0.8910248666175988
[2026-03-13 20:20:39] 2026-03-13 19:19:37,212 | INFO     | current chi2=0.8910248666175988 (change=1.7975146454004707 %)
[2026-03-13 20:20:39] 2026-03-13 19:19:37,212 | INFO     | left removable region: 30
[2026-03-13 20:20:39] 2026-03-13 19:19:37,213 | INFO     | sum of square deviations: 1838657730.0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,214 | INFO     | sum of deviations: 5984303557.000001
[2026-03-13 20:20:39] 2026-03-13 19:19:37,214 | INFO     | mean x: 1773423701.0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,214 | INFO     | mean y: 2501911.2430939227
[2026-03-13 20:20:39] 2026-03-13 19:19:37,214 | INFO     | intersect: -5769483591.443373
[2026-03-13 20:20:39] 2026-03-13 19:19:37,215 | INFO     | chi2: 0.0015239137479609718
[2026-03-13 20:20:39] 2026-03-13 19:19:37,215 | INFO     | current memory leak: 3.25 B/s (using 181 data points, chi2=0.00)
[2026-03-13 20:20:39] 2026-03-13 19:19:37,215 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-13 20:20:39] 2026-03-13 19:19:37,216 | INFO     | ..............................
[2026-03-13 20:20:39] 2026-03-13 19:19:37,216 | INFO     | . Timing measurements:
[2026-03-13 20:20:39] 2026-03-13 19:19:37,216 | INFO     | . get job = 0 s
[2026-03-13 20:20:39] 2026-03-13 19:19:37,216 | INFO     | . initial setup = 111 s
[2026-03-13 20:20:39] 2026-03-13 19:19:37,216 | INFO     | . payload setup = 136 s
[2026-03-13 20:20:39] 2026-03-13 19:19:37,216 | INFO     | . stage-in = 0 s
[2026-03-13 20:20:39] 2026-03-13 19:19:37,216 | INFO     | . payload execution = 13312 s
[2026-03-13 20:20:39] 2026-03-13 19:19:37,216 | INFO     | . stage-out = 3 s
[2026-03-13 20:20:39] 2026-03-13 19:19:37,217 | INFO     | . log creation = 1 s
[2026-03-13 20:20:39] 2026-03-13 19:19:37,217 | INFO     | ..............................
[2026-03-13 20:20:39] 2026-03-13 19:19:37,266 | INFO     | time since job start (13471s) is within the limit (345600.0s)
[2026-03-13 20:20:39] 2026-03-13 19:19:37,355 | INFO     | 
[2026-03-13 20:20:39] 2026-03-13 19:19:37,355 | INFO     | job summary report
[2026-03-13 20:20:39] 2026-03-13 19:19:37,355 | INFO     | --------------------------------------------------
[2026-03-13 20:20:39] 2026-03-13 19:19:37,356 | INFO     | PanDA job id: 7043586983
[2026-03-13 20:20:39] 2026-03-13 19:19:37,356 | INFO     | task id: 48955010
[2026-03-13 20:20:39] 2026-03-13 19:19:37,356 | INFO     | errors: (none)
[2026-03-13 20:20:39] 2026-03-13 19:19:37,356 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 20:20:39] 2026-03-13 19:19:37,356 | INFO     | pilot state: finished 
[2026-03-13 20:20:39] 2026-03-13 19:19:37,356 | INFO     | transexitcode: 0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,356 | INFO     | exeerrorcode: 0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,357 | INFO     | exeerrordiag: 
[2026-03-13 20:20:39] 2026-03-13 19:19:37,357 | INFO     | exitcode: 0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,357 | INFO     | exitmsg: OK
[2026-03-13 20:20:39] 2026-03-13 19:19:37,357 | INFO     | cpuconsumptiontime: 51172 s
[2026-03-13 20:20:39] 2026-03-13 19:19:37,357 | INFO     | nevents: 400
[2026-03-13 20:20:39] 2026-03-13 19:19:37,357 | INFO     | neventsw: 0
[2026-03-13 20:20:39] 2026-03-13 19:19:37,357 | INFO     | pid: 30329
[2026-03-13 20:20:39] 2026-03-13 19:19:37,357 | INFO     | pgrp: 30329
[2026-03-13 20:20:39] 2026-03-13 19:19:37,358 | INFO     | corecount: 8
[2026-03-13 20:20:39] 2026-03-13 19:19:37,358 | INFO     | event service: False
[2026-03-13 20:20:39] 2026-03-13 19:19:37,358 | INFO     | sizes: {0: 2279748, 1: 2280209, 12: 2280209, 13452: 2310332, 13453: 2310331, 13457: 2319385, 13458: 2319569, 13459: 2319763}
[2026-03-13 20:20:39] 2026-03-13 19:19:37,358 | INFO     | --------------------------------------------------
[2026-03-13 20:20:39] 2026-03-13 19:19:37,358 | INFO     | 
[2026-03-13 20:20:39] 2026-03-13 19:19:37,358 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-13 20:20:39] 2026-03-13 19:19:37,671 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,671 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,672 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,672 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,673 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,673 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 20:20:39] 2026-03-13 19:19:37,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,674 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 20:20:39] 2026-03-13 19:19:37,674 | INFO     | job 7043586983 has completed (purged errors)
[2026-03-13 20:20:39] 2026-03-13 19:19:37,674 | INFO     | overall cleanup function is called
[2026-03-13 20:20:39] 2026-03-13 19:19:38,681 | INFO     | --- collectZombieJob: --- 10, [30329]
[2026-03-13 20:20:39] 2026-03-13 19:19:38,682 | INFO     | zombie collector waiting for pid 30329
[2026-03-13 20:20:39] 2026-03-13 19:19:38,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 20:20:39] 2026-03-13 19:19:38,682 | INFO     | collected zombie processes
[2026-03-13 20:20:39] 2026-03-13 19:19:38,682 | INFO     | will attempt to kill all subprocesses of pid=30329
[2026-03-13 20:20:39] 2026-03-13 19:19:38,808 | INFO     | process IDs to be killed: [30329] (in reverse order)
[2026-03-13 20:20:39] 2026-03-13 19:19:39,694 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 20:20:39] 2026-03-13 19:19:39,694 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 20:20:39] 2026-03-13 19:19:39,698 | INFO     | did not find any defunct processes belonging to 30329
[2026-03-13 20:20:39] 2026-03-13 19:19:39,700 | INFO     | did not find any defunct processes belonging to 30329
[2026-03-13 20:20:39] 2026-03-13 19:19:39,701 | INFO     | ready for new job
[2026-03-13 20:20:39] 2026-03-13 19:19:39,701 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 20:20:39] 2026-03-13 19:19:39,706 | INFO     | **************************************
[2026-03-13 20:20:39] 2026-03-13 19:19:39,706 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 20:20:39] 2026-03-13 19:19:39,706 | INFO     | **************************************
[2026-03-13 20:20:39] 2026-03-13 19:19:39,706 | INFO     | 
[2026-03-13 20:20:39] 2026-03-13 19:19:39,707 | INFO     | pilot is running in a VM
[2026-03-13 20:20:39] 2026-03-13 19:19:39,707 | INFO     | architecture information:
[2026-03-13 20:20:39] 2026-03-13 19:19:39,718 | INFO     | executing command: cat /etc/os-release
[2026-03-13 20:20:39] 2026-03-13 19:19:40,083 | INFO     | cat /etc/os-release:
[2026-03-13 20:20:39] NAME="CentOS Linux"
[2026-03-13 20:20:39] VERSION="7 (Core)"
[2026-03-13 20:20:39] ID="centos"
[2026-03-13 20:20:39] ID_LIKE="rhel fedora"
[2026-03-13 20:20:39] VERSION_ID="7"
[2026-03-13 20:20:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 20:20:39] ANSI_COLOR="0;31"
[2026-03-13 20:20:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 20:20:39] HOME_URL="https://www.centos.org/"
[2026-03-13 20:20:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 20:20:39] 
[2026-03-13 20:20:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 20:20:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 20:20:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 20:20:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 20:20:39] 
[2026-03-13 20:20:39] 2026-03-13 19:19:40,083 | INFO     | **************************************
[2026-03-13 20:20:39] 2026-03-13 19:19:40,587 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-13 20:20:39] 2026-03-13 19:19:40,855 | INFO     | sufficient remaining disk space (495663972352 B)
[2026-03-13 20:20:39] 2026-03-13 19:19:40,856 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 20:20:39] 2026-03-13 19:19:40,856 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 20:20:39] 2026-03-13 19:19:40,856 | INFO     | update_server=False
[2026-03-13 20:20:39] 2026-03-13 19:19:40,856 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 20:20:39] 2026-03-13 19:19:40,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 20:20:39] 2026-03-13 19:19:41,335 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 20:20:39] 2026-03-13 19:19:41,336 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 20:20:39] 2026-03-13 19:19:41,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 20:20:39] 2026-03-13 19:19:41,336 | INFO     | will abort loop
[2026-03-13 20:20:39] 2026-03-13 19:19:41,423 | INFO     | all data control threads have been joined
[2026-03-13 20:20:39] 2026-03-13 19:19:41,431 | INFO     | all payload control threads have been joined
[2026-03-13 20:20:39] 2026-03-13 19:19:41,529 | INFO     | all job control threads have been joined
[2026-03-13 20:20:39] 2026-03-13 19:19:41,862 | INFO     | [job] retrieve thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:42,244 | INFO     | [payload] validate_post thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:42,291 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:42,342 | INFO     | [job] job monitor thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:42,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 20:20:39] 2026-03-13 19:19:42,376 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:42,430 | INFO     | [data] control thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:42,438 | INFO     | [payload] control thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:42,488 | INFO     | [payload] failed_post thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:42,537 | INFO     | [job] control thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:42,747 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:42,786 | INFO     | [data] copytool_in thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:42,788 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:42,864 | INFO     | [data] copytool_out thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:43,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 20:20:39] 2026-03-13 19:19:43,056 | INFO     | [job] validate thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:43,376 | INFO     | [job] queue monitor thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:19:47,055 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 20:20:39] 2026-03-13 19:20:10,441 | INFO     | PID=25795 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 20:20:39] 2026-03-13 19:20:10,441 | INFO     | .. there are 9 such processes running
[2026-03-13 20:20:39] 2026-03-13 19:20:10,441 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 20:20:39] 2026-03-13 19:20:10,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 20:20:39] 2026-03-13 19:20:10,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 20:20:39] 2026-03-13 19:20:28,635 | INFO     | [monitor] cgroup control has ended
[2026-03-13 20:20:39] 2026-03-13 19:20:30,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140133202184000)>', '<ExcThread(monitor, started 140132619376384)>']
[2026-03-13 20:20:39] 2026-03-13 19:20:30,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 20:20:39] 2026-03-13 19:20:30,561 | INFO     | [monitor] control thread has ended
[2026-03-13 20:20:39] 2026-03-13 19:20:35,070 | INFO     | all workflow threads have been joined
[2026-03-13 20:20:39] 2026-03-13 19:20:35,071 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 20:20:39] 2026-03-13 19:20:35,071 | INFO     | traces error code: 0
[2026-03-13 20:20:39] 2026-03-13 19:20:35,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 20:20:39] 2026-03-13 19:20:35,344 [wrapper] ==== pilot stdout END ====
[2026-03-13 20:20:39] 2026-03-13 19:20:35,424 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 20:20:39] 2026-03-13 19:20:35,542 [wrapper] pilotpid: 25795
[2026-03-13 20:20:39] 2026-03-13 19:20:35,636 [wrapper] Pilot exit status: 0
[2026-03-13 20:20:39] 2026-03-13 19:20:36,081 [wrapper] pandaids: 7043586983
[2026-03-13 20:20:39] 2026-03-13 19:20:36,892 [wrapper] cleanup supervisor_pilot  5661 25796
[2026-03-13 20:20:39] 2026-03-13 19:20:36,967 [wrapper] Test setup, not cleaning
[2026-03-13 20:20:39] 2026-03-13 19:20:37,037 [wrapper] apfmon messages muted
[2026-03-13 20:20:39] 2026-03-13 19:20:37,124 [wrapper] ==== wrapper stdout END ====
[2026-03-13 20:20:39] 2026-03-13 19:20:37,230 [wrapper] ==== wrapper stderr END ====
[2026-03-13 20:20:39]  *** Error codes and diagnostics ***
[2026-03-13 20:20:39]     "exeErrorCode": 0,
[2026-03-13 20:20:39]     "exeErrorDiag": "",
[2026-03-13 20:20:39]     "pilotErrorCode": 0,
[2026-03-13 20:20:39]     "pilotErrorDiag": "",
[2026-03-13 20:20:39]  *** Listing of results directory ***
[2026-03-13 20:20:39] total 613528
[2026-03-13 20:20:39] -rwx------. 1 boinc boinc     36322 Mar 12 22:11 runpilot2-wrapper.sh
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc      5111 Mar 12 22:12 queuedata.json
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc    585013 Mar 12 22:12 pilot3.tar.gz
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc       100 Mar 13 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 20:20:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 16:29 run_atlas
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc       105 Mar 13 16:29 job.xml
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc      6391 Mar 13 16:29 init_data.xml
[2026-03-13 20:20:39] -rw-r--r--. 2 boinc boinc 435965344 Mar 13 16:29 EVNT.46701403._001503.pool.root.1
[2026-03-13 20:20:39] -rw-r--r--. 2 boinc boinc     15845 Mar 13 16:29 start_atlas.sh
[2026-03-13 20:20:39] drwxrwx--x. 2 boinc boinc        68 Mar 13 16:29 shared
[2026-03-13 20:20:39] -rw-r--r--. 2 boinc boinc    597527 Mar 13 16:29 input.tar.gz
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc         0 Mar 13 16:29 boinc_lockfile
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc      2564 Mar 13 16:29 pandaJob.out
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc       415 Mar 13 16:35 workernode_map.json
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc   1006539 Mar 13 16:35 agis_schedconf.cvmfs.json
[2026-03-13 20:20:39] drwx------. 5 boinc boinc      4096 Mar 13 16:35 pilot3
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc 183675968 Mar 13 20:18 HITS.48955010._025453.pool.root.1
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc       531 Mar 13 20:18 boinc_task_state.xml
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc      1013 Mar 13 20:19 memory_monitor_summary.json
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc        95 Mar 13 20:19 pilot_heartbeat.json
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc   1511579 Mar 13 20:19 agis_ddmendpoints.agis.ALL.json
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc    464799 Mar 13 20:19 log.48955010._025453.job.log.tgz.1
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc      6325 Mar 13 20:19 heartbeat.json
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc      8192 Mar 13 20:20 boinc_mmap_file
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc        28 Mar 13 20:20 wrapper_checkpoint.txt
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc      5066 Mar 13 20:20 pilotlog.txt
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc   1878944 Mar 13 20:20 log.48955010._025453.job.log.1
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc       357 Mar 13 20:20 output.list
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc       620 Mar 13 20:20 runtime_log
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc   2365440 Mar 13 20:20 result.tar.gz
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc      8816 Mar 13 20:20 runtime_log.err
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc       656 Mar 13 20:20 2vOKDm4U2K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNKlLDmIwJJJo.diag
[2026-03-13 20:20:39] -rw-r--r--. 1 boinc boinc     20743 Mar 13 20:20 stderr.txt
[2026-03-13 20:20:39] HITS file was successfully produced:
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc 183675968 Mar 13 20:18 shared/HITS.pool.root.1
[2026-03-13 20:20:39]  *** Contents of shared directory: ***
[2026-03-13 20:20:39] total 608032
[2026-03-13 20:20:39] -rw-r--r--. 2 boinc boinc 435965344 Mar 13 16:29 ATLAS.root_0
[2026-03-13 20:20:39] -rw-r--r--. 2 boinc boinc     15845 Mar 13 16:29 start_atlas.sh
[2026-03-13 20:20:39] -rw-r--r--. 2 boinc boinc    597527 Mar 13 16:29 input.tar.gz
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc 183675968 Mar 13 20:18 HITS.pool.root.1
[2026-03-13 20:20:39] -rw-------. 1 boinc boinc   2365440 Mar 13 20:20 result.tar.gz
20:20:41 (21651): run_atlas exited; CPU time 51376.729209
20:20:41 (21651): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN