Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:42:42 (19524): wrapper (7.7.26015): starting
10:42:42 (19524): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 10:42:42] Arguments: --nthreads 8
[2026-03-13 10:42:42] Threads: 8
[2026-03-13 10:42:42] Checking for CVMFS
[2026-03-13 10:42:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 10:42:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 10:42:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 10:42:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 10:42:46] 2.11.2.0 14173 125968 138804 157234 0 53 16216959 25165824 4784 130560 160 39783515 99.819 27404764 982 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 10:42:46] CVMFS is ok
[2026-03-13 10:42:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 10:42:46] Checking for apptainer binary...
[2026-03-13 10:42:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 10:42:46] Running /usr/bin/apptainer --version
[2026-03-13 10:42:46] apptainer version 1.3.2-1.el7
[2026-03-13 10:42:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 10:43:28] cg-vwn375.simple-grid.lan
[2026-03-13 10:43:28] apptainer works
[2026-03-13 10:43:28] Set ATHENA_PROC_NUMBER=8
[2026-03-13 10:43:28] Set ATHENA_CORE_NUMBER=8
[2026-03-13 10:43:28] Starting ATLAS job with PandaID=7043523939
[2026-03-13 10:43:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 14:37:45]  *** The last 200 lines of the pilot log: ***
[2026-03-13 14:37:45] 2026-03-13 13:36:39,950 | INFO     | job 7043523939 has state=finished
[2026-03-13 14:37:45] 2026-03-13 13:36:39,950 | INFO     | preparing for final server update for job 7043523939 in state='finished'
[2026-03-13 14:37:45] 2026-03-13 13:36:39,950 | INFO     | reading metadata from: /var/lib/boinc/slots/9/PanDA_Pilot-7043523939/jobReport.json
[2026-03-13 14:37:45] 2026-03-13 13:36:39,953 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/9/workernode_map.json
[2026-03-13 14:37:45] 2026-03-13 13:36:39,954 | INFO     | this job has now completed (state=finished)
[2026-03-13 14:37:45] 2026-03-13 13:36:39,954 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 14:37:45] 2026-03-13 13:36:39,954 | INFO     | log transfer has been attempted: DONE
[2026-03-13 14:37:45] 2026-03-13 13:36:39,954 | INFO     | job 7043523939 has finished - writing final server update
[2026-03-13 14:37:45] 2026-03-13 13:36:39,954 | INFO     | total number of processed events: 400 (read)
[2026-03-13 14:37:45] 2026-03-13 13:36:39,956 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7043523939/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 14:37:45] 2026-03-13 13:36:39,957 | INFO     | extracted standard info from prmon json
[2026-03-13 14:37:45] 2026-03-13 13:36:39,957 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 14:37:45] 2026-03-13 13:36:39,957 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 14:37:45] 2026-03-13 13:36:39,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 14:37:45] 2026-03-13 13:36:39,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 14:37:45] 2026-03-13 13:36:39,962 | INFO     | fitting pss+swap vs Time
[2026-03-13 14:37:45] 2026-03-13 13:36:39,963 | INFO     | sum of square deviations: 3346927870.0
[2026-03-13 14:37:45] 2026-03-13 13:36:39,965 | INFO     | sum of deviations: 41950345685.0
[2026-03-13 14:37:45] 2026-03-13 13:36:39,965 | INFO     | mean x: 1773402256.0
[2026-03-13 14:37:45] 2026-03-13 13:36:39,965 | INFO     | mean y: 2448071.9366515838
[2026-03-13 14:37:45] 2026-03-13 13:36:39,965 | INFO     | intersect: -22225350245.61683
[2026-03-13 14:37:45] 2026-03-13 13:36:39,966 | INFO     | chi2: 4.841031887037546
[2026-03-13 14:37:45] 2026-03-13 13:36:39,966 | INFO     | sum of square deviations: 3124858590.0
[2026-03-13 14:37:45] 2026-03-13 13:36:39,968 | INFO     | sum of deviations: 55393405972.499985
[2026-03-13 14:37:45] 2026-03-13 13:36:39,968 | INFO     | mean x: 1773402103.5
[2026-03-13 14:37:45] 2026-03-13 13:36:39,968 | INFO     | mean y: 2457119.9768518517
[2026-03-13 14:37:45] 2026-03-13 13:36:39,968 | INFO     | intersect: -31434095876.701614
[2026-03-13 14:37:45] 2026-03-13 13:36:39,968 | INFO     | chi2: 4.107506618667631
[2026-03-13 14:37:45] 2026-03-13 13:36:39,969 | INFO     | current chi2=4.107506618667631 (change=15.152250294694783 %)
[2026-03-13 14:37:45] 2026-03-13 13:36:39,969 | INFO     | right removable region: 215
[2026-03-13 14:37:45] 2026-03-13 13:36:39,969 | INFO     | sum of square deviations: 3124858590.0
[2026-03-13 14:37:45] 2026-03-13 13:36:39,971 | INFO     | sum of deviations: -26813933205.5
[2026-03-13 14:37:45] 2026-03-13 13:36:39,971 | INFO     | mean x: 1773402408.5
[2026-03-13 14:37:45] 2026-03-13 13:36:39,971 | INFO     | mean y: 2495192.087962963
[2026-03-13 14:37:45] 2026-03-13 13:36:39,971 | INFO     | intersect: 15219789785.886469
[2026-03-13 14:37:45] 2026-03-13 13:36:39,975 | INFO     | chi2: 1.0099486107447713
[2026-03-13 14:37:45] 2026-03-13 13:36:39,975 | INFO     | current chi2=1.0099486107447713 (change=79.13774099590147 %)
[2026-03-13 14:37:45] 2026-03-13 13:36:39,975 | INFO     | sum of square deviations: 2912836010.0
[2026-03-13 14:37:45] 2026-03-13 13:36:39,977 | INFO     | sum of deviations: -35090474175.0
[2026-03-13 14:37:45] 2026-03-13 13:36:39,977 | INFO     | mean x: 1773402561.0
[2026-03-13 14:37:45] 2026-03-13 13:36:39,977 | INFO     | mean y: 2501095.2085308055
[2026-03-13 14:37:45] 2026-03-13 13:36:39,977 | INFO     | intersect: 21366400935.43653
[2026-03-13 14:37:45] 2026-03-13 13:36:39,978 | INFO     | chi2: 0.9169895039666535
[2026-03-13 14:37:45] 2026-03-13 13:36:39,978 | INFO     | current chi2=0.9169895039666535 (change=9.204340279211486 %)
[2026-03-13 14:37:45] 2026-03-13 13:36:39,978 | INFO     | left removable region: 20
[2026-03-13 14:37:45] 2026-03-13 13:36:39,978 | INFO     | sum of square deviations: 2299168690.0
[2026-03-13 14:37:45] 2026-03-13 13:36:39,980 | INFO     | sum of deviations: -7106777184.0
[2026-03-13 14:37:45] 2026-03-13 13:36:39,980 | INFO     | mean x: 1773402683.0
[2026-03-13 14:37:45] 2026-03-13 13:36:39,980 | INFO     | mean y: 2500950.8615384614
[2026-03-13 14:37:45] 2026-03-13 13:36:39,980 | INFO     | intersect: 5484124713.574133
[2026-03-13 14:37:45] 2026-03-13 13:36:39,981 | INFO     | chi2: 0.07353799579214873
[2026-03-13 14:37:45] 2026-03-13 13:36:39,981 | INFO     | current memory leak: -3.09 B/s (using 195 data points, chi2=0.07)
[2026-03-13 14:37:45] 2026-03-13 13:36:39,982 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-13 14:37:45] 2026-03-13 13:36:39,982 | INFO     | ..............................
[2026-03-13 14:37:45] 2026-03-13 13:36:39,982 | INFO     | . Timing measurements:
[2026-03-13 14:37:45] 2026-03-13 13:36:39,982 | INFO     | . get job = 0 s
[2026-03-13 14:37:45] 2026-03-13 13:36:39,982 | INFO     | . initial setup = 98 s
[2026-03-13 14:37:45] 2026-03-13 13:36:39,982 | INFO     | . payload setup = 121 s
[2026-03-13 14:37:45] 2026-03-13 13:36:39,982 | INFO     | . stage-in = 0 s
[2026-03-13 14:37:45] 2026-03-13 13:36:39,982 | INFO     | . payload execution = 13575 s
[2026-03-13 14:37:45] 2026-03-13 13:36:39,983 | INFO     | . stage-out = 4 s
[2026-03-13 14:37:45] 2026-03-13 13:36:39,983 | INFO     | . log creation = 1 s
[2026-03-13 14:37:45] 2026-03-13 13:36:39,983 | INFO     | ..............................
[2026-03-13 14:37:45] 2026-03-13 13:36:40,123 | INFO     | 
[2026-03-13 14:37:45] 2026-03-13 13:36:40,123 | INFO     | job summary report
[2026-03-13 14:37:45] 2026-03-13 13:36:40,123 | INFO     | --------------------------------------------------
[2026-03-13 14:37:45] 2026-03-13 13:36:40,123 | INFO     | PanDA job id: 7043523939
[2026-03-13 14:37:45] 2026-03-13 13:36:40,123 | INFO     | task id: 48955015
[2026-03-13 14:37:45] 2026-03-13 13:36:40,123 | INFO     | errors: (none)
[2026-03-13 14:37:45] 2026-03-13 13:36:40,123 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 14:37:45] 2026-03-13 13:36:40,124 | INFO     | pilot state: finished 
[2026-03-13 14:37:45] 2026-03-13 13:36:40,124 | INFO     | transexitcode: 0
[2026-03-13 14:37:45] 2026-03-13 13:36:40,124 | INFO     | exeerrorcode: 0
[2026-03-13 14:37:45] 2026-03-13 13:36:40,124 | INFO     | exeerrordiag: 
[2026-03-13 14:37:45] 2026-03-13 13:36:40,124 | INFO     | exitcode: 0
[2026-03-13 14:37:45] 2026-03-13 13:36:40,124 | INFO     | exitmsg: OK
[2026-03-13 14:37:45] 2026-03-13 13:36:40,124 | INFO     | cpuconsumptiontime: 52505 s
[2026-03-13 14:37:45] 2026-03-13 13:36:40,124 | INFO     | nevents: 400
[2026-03-13 14:37:45] 2026-03-13 13:36:40,124 | INFO     | neventsw: 0
[2026-03-13 14:37:45] 2026-03-13 13:36:40,124 | INFO     | pid: 28153
[2026-03-13 14:37:45] 2026-03-13 13:36:40,125 | INFO     | pgrp: 28153
[2026-03-13 14:37:45] 2026-03-13 13:36:40,125 | INFO     | corecount: 8
[2026-03-13 14:37:45] 2026-03-13 13:36:40,125 | INFO     | event service: False
[2026-03-13 14:37:45] 2026-03-13 13:36:40,125 | INFO     | sizes: {0: 2279749, 1: 2280210, 13700: 2310385, 13701: 2310384, 13705: 2319438, 13706: 2319494, 13708: 2319816}
[2026-03-13 14:37:45] 2026-03-13 13:36:40,125 | INFO     | --------------------------------------------------
[2026-03-13 14:37:45] 2026-03-13 13:36:40,125 | INFO     | 
[2026-03-13 14:37:45] 2026-03-13 13:36:40,125 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-13 14:37:45] 2026-03-13 13:36:40,644 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,645 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,645 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,645 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,646 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,646 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,646 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,646 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,646 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,646 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,646 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,646 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 14:37:45] 2026-03-13 13:36:40,646 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,646 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 14:37:45] 2026-03-13 13:36:40,646 | INFO     | job 7043523939 has completed (purged errors)
[2026-03-13 14:37:45] 2026-03-13 13:36:40,647 | INFO     | overall cleanup function is called
[2026-03-13 14:37:45] 2026-03-13 13:36:41,655 | INFO     | --- collectZombieJob: --- 10, [28153]
[2026-03-13 14:37:45] 2026-03-13 13:36:41,655 | INFO     | zombie collector waiting for pid 28153
[2026-03-13 14:37:45] 2026-03-13 13:36:41,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 14:37:45] 2026-03-13 13:36:41,655 | INFO     | collected zombie processes
[2026-03-13 14:37:45] 2026-03-13 13:36:41,655 | INFO     | will attempt to kill all subprocesses of pid=28153
[2026-03-13 14:37:45] 2026-03-13 13:36:41,816 | INFO     | process IDs to be killed: [28153] (in reverse order)
[2026-03-13 14:37:45] 2026-03-13 13:36:42,324 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 14:37:45] 2026-03-13 13:36:42,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 14:37:45] 2026-03-13 13:36:42,328 | INFO     | did not find any defunct processes belonging to 28153
[2026-03-13 14:37:45] 2026-03-13 13:36:42,331 | INFO     | did not find any defunct processes belonging to 28153
[2026-03-13 14:37:45] 2026-03-13 13:36:42,331 | INFO     | ready for new job
[2026-03-13 14:37:45] 2026-03-13 13:36:42,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 14:37:45] 2026-03-13 13:36:42,333 | INFO     | **************************************
[2026-03-13 14:37:45] 2026-03-13 13:36:42,333 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 14:37:45] 2026-03-13 13:36:42,333 | INFO     | **************************************
[2026-03-13 14:37:45] 2026-03-13 13:36:42,333 | INFO     | 
[2026-03-13 14:37:45] 2026-03-13 13:36:42,334 | INFO     | pilot is running in a VM
[2026-03-13 14:37:45] 2026-03-13 13:36:42,334 | INFO     | architecture information:
[2026-03-13 14:37:45] 2026-03-13 13:36:42,341 | INFO     | executing command: cat /etc/os-release
[2026-03-13 14:37:45] 2026-03-13 13:36:42,618 | INFO     | cat /etc/os-release:
[2026-03-13 14:37:45] NAME="CentOS Linux"
[2026-03-13 14:37:45] VERSION="7 (Core)"
[2026-03-13 14:37:45] ID="centos"
[2026-03-13 14:37:45] ID_LIKE="rhel fedora"
[2026-03-13 14:37:45] VERSION_ID="7"
[2026-03-13 14:37:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 14:37:45] ANSI_COLOR="0;31"
[2026-03-13 14:37:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 14:37:45] HOME_URL="https://www.centos.org/"
[2026-03-13 14:37:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 14:37:45] 
[2026-03-13 14:37:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 14:37:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 14:37:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 14:37:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 14:37:45] 
[2026-03-13 14:37:45] 2026-03-13 13:36:42,618 | INFO     | **************************************
[2026-03-13 14:37:45] 2026-03-13 13:36:43,122 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-13 14:37:45] 2026-03-13 13:36:43,315 | INFO     | sufficient remaining disk space (494754856960 B)
[2026-03-13 14:37:45] 2026-03-13 13:36:43,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 14:37:45] 2026-03-13 13:36:43,316 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 14:37:45] 2026-03-13 13:36:43,316 | INFO     | update_server=False
[2026-03-13 14:37:45] 2026-03-13 13:36:43,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 14:37:45] 2026-03-13 13:36:43,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 14:37:45] 2026-03-13 13:36:43,364 | INFO     | all data control threads have been joined
[2026-03-13 14:37:45] 2026-03-13 13:36:43,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 14:37:45] 2026-03-13 13:36:43,518 | INFO     | aborting loop
[2026-03-13 14:37:45] 2026-03-13 13:36:43,856 | INFO     | all payload control threads have been joined
[2026-03-13 14:37:45] 2026-03-13 13:36:44,322 | INFO     | [job] retrieve thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:44,342 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:44,370 | INFO     | [data] control thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:44,524 | INFO     | [job] job monitor thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:44,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 14:37:45] 2026-03-13 13:36:44,862 | INFO     | [payload] control thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:44,889 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:44,954 | INFO     | all job control threads have been joined
[2026-03-13 14:37:45] 2026-03-13 13:36:45,087 | INFO     | [data] copytool_in thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:45,136 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:45,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 14:37:45] 2026-03-13 13:36:45,150 | INFO     | [payload] validate_post thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:45,203 | INFO     | [job] validate thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:45,324 | INFO     | [data] copytool_out thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:45,535 | INFO     | [payload] failed_post thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:45,960 | INFO     | [job] control thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:46,147 | INFO     | [job] queue monitor thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:48,679 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:36:53,430 | INFO     | job.realtimelogging is not enabled
[2026-03-13 14:37:45] 2026-03-13 13:36:54,436 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 14:37:45] 2026-03-13 13:37:12,379 | INFO     | PID=23647 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 14:37:45] 2026-03-13 13:37:12,380 | INFO     | .. there are 9 such processes running
[2026-03-13 14:37:45] 2026-03-13 13:37:12,381 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 14:37:45] 2026-03-13 13:37:12,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 14:37:45] 2026-03-13 13:37:12,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 14:37:45] 2026-03-13 13:37:33,938 | INFO     | [monitor] cgroup control has ended
[2026-03-13 14:37:45] 2026-03-13 13:37:35,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140046671726400)>', '<ExcThread(monitor, started 140046216697600)>']
[2026-03-13 14:37:45] 2026-03-13 13:37:35,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 14:37:45] 2026-03-13 13:37:35,518 | INFO     | [monitor] control thread has ended
[2026-03-13 14:37:45] 2026-03-13 13:37:40,412 | INFO     | all workflow threads have been joined
[2026-03-13 14:37:45] 2026-03-13 13:37:40,412 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 14:37:45] 2026-03-13 13:37:40,412 | INFO     | traces error code: 0
[2026-03-13 14:37:45] 2026-03-13 13:37:40,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 14:37:45] 2026-03-13 13:37:40,831 [wrapper] ==== pilot stdout END ====
[2026-03-13 14:37:45] 2026-03-13 13:37:40,949 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 14:37:45] 2026-03-13 13:37:41,039 [wrapper] pilotpid: 23647
[2026-03-13 14:37:45] 2026-03-13 13:37:41,144 [wrapper] Pilot exit status: 0
[2026-03-13 14:37:45] 2026-03-13 13:37:41,672 [wrapper] pandaids: 7043523939
[2026-03-13 14:37:45] 2026-03-13 13:37:42,885 [wrapper] cleanup supervisor_pilot  3753 23648
[2026-03-13 14:37:45] 2026-03-13 13:37:42,994 [wrapper] Test setup, not cleaning
[2026-03-13 14:37:45] 2026-03-13 13:37:43,073 [wrapper] apfmon messages muted
[2026-03-13 14:37:45] 2026-03-13 13:37:43,151 [wrapper] ==== wrapper stdout END ====
[2026-03-13 14:37:45] 2026-03-13 13:37:43,213 [wrapper] ==== wrapper stderr END ====
[2026-03-13 14:37:45]  *** Error codes and diagnostics ***
[2026-03-13 14:37:45]     "exeErrorCode": 0,
[2026-03-13 14:37:45]     "exeErrorDiag": "",
[2026-03-13 14:37:45]     "pilotErrorCode": 0,
[2026-03-13 14:37:45]     "pilotErrorDiag": "",
[2026-03-13 14:37:45]  *** Listing of results directory ***
[2026-03-13 14:37:45] total 616516
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc      5111 Mar 12 20:23 queuedata.json
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc    585013 Mar 12 20:23 pilot3.tar.gz
[2026-03-13 14:37:45] -rwx------. 1 boinc boinc     36322 Mar 12 20:24 runpilot2-wrapper.sh
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc       100 Mar 13 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 14:37:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 10:42 run_atlas
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc       105 Mar 13 10:42 job.xml
[2026-03-13 14:37:45] -rw-r--r--. 2 boinc boinc 437964942 Mar 13 10:42 EVNT.46701403._002150.pool.root.1
[2026-03-13 14:37:45] -rw-r--r--. 2 boinc boinc     15845 Mar 13 10:42 start_atlas.sh
[2026-03-13 14:37:45] drwxrwx--x. 2 boinc boinc        68 Mar 13 10:42 shared
[2026-03-13 14:37:45] -rw-r--r--. 2 boinc boinc    597534 Mar 13 10:42 input.tar.gz
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc      6391 Mar 13 10:42 init_data.xml
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc         0 Mar 13 10:42 boinc_lockfile
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc      2569 Mar 13 10:43 pandaJob.out
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc       415 Mar 13 10:48 workernode_map.json
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc   1006487 Mar 13 10:48 agis_schedconf.cvmfs.json
[2026-03-13 14:37:45] drwx------. 5 boinc boinc      4096 Mar 13 10:48 pilot3
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc 184683654 Mar 13 14:35 HITS.48955015._014610.pool.root.1
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc       531 Mar 13 14:35 boinc_task_state.xml
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc      1025 Mar 13 14:36 memory_monitor_summary.json
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc   1511578 Mar 13 14:36 agis_ddmendpoints.agis.ALL.json
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc    457629 Mar 13 14:36 log.48955015._014610.job.log.tgz.1
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc      6317 Mar 13 14:36 heartbeat.json
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc        95 Mar 13 14:37 pilot_heartbeat.json
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc      8192 Mar 13 14:37 boinc_mmap_file
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc        28 Mar 13 14:37 wrapper_checkpoint.txt
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc      4952 Mar 13 14:37 pilotlog.txt
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc   1912894 Mar 13 14:37 log.48955015._014610.job.log.1
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc       357 Mar 13 14:37 output.list
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc       620 Mar 13 14:37 runtime_log
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc   2385920 Mar 13 14:37 result.tar.gz
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc       655 Mar 13 14:37 whRKDmFp0K9n9Rq4apOajLDm4fhM0noT9bVooX4SDm23kLDmGfyMWn.diag
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc      8816 Mar 13 14:37 runtime_log.err
[2026-03-13 14:37:45] -rw-r--r--. 1 boinc boinc     20877 Mar 13 14:37 stderr.txt
[2026-03-13 14:37:45] HITS file was successfully produced:
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc 184683654 Mar 13 14:35 shared/HITS.pool.root.1
[2026-03-13 14:37:45]  *** Contents of shared directory: ***
[2026-03-13 14:37:45] total 610992
[2026-03-13 14:37:45] -rw-r--r--. 2 boinc boinc 437964942 Mar 13 10:42 ATLAS.root_0
[2026-03-13 14:37:45] -rw-r--r--. 2 boinc boinc     15845 Mar 13 10:42 start_atlas.sh
[2026-03-13 14:37:45] -rw-r--r--. 2 boinc boinc    597534 Mar 13 10:42 input.tar.gz
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc 184683654 Mar 13 14:35 HITS.pool.root.1
[2026-03-13 14:37:45] -rw-------. 1 boinc boinc   2385920 Mar 13 14:37 result.tar.gz
14:37:47 (19524): run_atlas exited; CPU time 52715.670078
14:37:47 (19524): called boinc_finish(0)

</stderr_txt>
]]>

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