Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:00:16 (1748839): wrapper (7.7.26015): starting
21:00:16 (1748839): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 21:00:16] Arguments: --nthreads 8
[2026-03-12 21:00:16] Threads: 8
[2026-03-12 21:00:16] Checking for CVMFS
[2026-03-12 21:00:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 21:00:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 21:00:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 21:00:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 21:00:18] 2.13.3.0 9358 181747 332140 157221 0 344 31565728 32935937 24549 16776704 0 770883628 99.700 585112083 32806 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 21:00:18] CVMFS is ok
[2026-03-12 21:00:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 21:00:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 21:00:18] Further information can be found at the LHC@home message board.
[2026-03-12 21:00:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 21:00:18] Checking for apptainer binary...
[2026-03-12 21:00:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 21:00:18] Running /usr/bin/apptainer --version
[2026-03-12 21:00:18] apptainer version 1.4.5-2.el9
[2026-03-12 21:00:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 21:00:19] c-6-6.aglt2.org
[2026-03-12 21:00:19] apptainer works
[2026-03-12 21:00:19] Set ATHENA_PROC_NUMBER=8
[2026-03-12 21:00:19] Set ATHENA_CORE_NUMBER=8
[2026-03-12 21:00:19] Starting ATLAS job with PandaID=7043489263
[2026-03-12 21:00:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:00:07 (1748839): BOINC client no longer exists - exiting
22:00:07 (1748839): timer handler: client dead, exiting
22:10:44 (2090791): wrapper (7.7.26015): starting
22:10:44 (2090791): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 22:10:44] Arguments: --nthreads 8
[2026-03-12 22:10:44] Threads: 8
[2026-03-12 22:10:44] This job has been restarted, cleaning up previous attempt
[2026-03-12 22:10:44] Checking for CVMFS
[2026-03-12 22:10:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 22:10:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 22:10:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 22:10:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 22:10:45] 2.13.3.0 9358 181818 338072 157222 1 491 17247087 32935936 24709 16776704 0 771807667 99.700 585751771 32800 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 22:10:45] CVMFS is ok
[2026-03-12 22:10:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 22:10:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 22:10:45] Further information can be found at the LHC@home message board.
[2026-03-12 22:10:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 22:10:45] Checking for apptainer binary...
[2026-03-12 22:10:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 22:10:45] Running /usr/bin/apptainer --version
[2026-03-12 22:10:46] apptainer version 1.4.5-2.el9
[2026-03-12 22:10:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 22:10:47] c-6-6.aglt2.org
[2026-03-12 22:10:47] apptainer works
[2026-03-12 22:10:47] Set ATHENA_PROC_NUMBER=8
[2026-03-12 22:10:47] Set ATHENA_CORE_NUMBER=8
[2026-03-12 22:10:47] Starting ATLAS job with PandaID=7043489263
[2026-03-12 22:10:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 19:45:10]  *** The last 200 lines of the pilot log: ***
[2026-03-14 19:45:10] 2026-03-14 23:44:00,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 19:45:10] 2026-03-14 23:44:00,307 | INFO     | time since job start (163933s) is within the limit (345600.0s)
[2026-03-14 19:45:10] 2026-03-14 23:44:01,417 | INFO     | sum of deviations: 992556183970.1841
[2026-03-14 19:45:10] 2026-03-14 23:44:01,417 | INFO     | mean x: 1773449890.493115
[2026-03-14 19:45:10] 2026-03-14 23:44:01,417 | INFO     | mean y: 2497914.9017491625
[2026-03-14 19:45:10] 2026-03-14 23:44:01,417 | INFO     | intersect: -290112774.9893756
[2026-03-14 19:45:10] 2026-03-14 23:44:01,812 | INFO     | chi2: 5.417008166408687
[2026-03-14 19:45:10] 2026-03-14 23:44:01,815 | INFO     | sum of square deviations: 5982148443228.893
[2026-03-14 19:45:10] 2026-03-14 23:44:02,424 | INFO     | time since job start (163935s) is within the limit (345600.0s)
[2026-03-14 19:45:10] 2026-03-14 23:44:02,600 | INFO     | monitor loop #8306: job 0:7043489263 is in state 'finished'
[2026-03-14 19:45:10] 2026-03-14 23:44:02,600 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 19:45:10] 2026-03-14 23:44:03,274 | INFO     | sum of deviations: 1548757759871.273
[2026-03-14 19:45:10] 2026-03-14 23:44:03,323 | INFO     | mean x: 1773449737.9936614
[2026-03-14 19:45:10] 2026-03-14 23:44:03,323 | INFO     | mean y: 2500443.427665921
[2026-03-14 19:45:10] 2026-03-14 23:44:03,323 | INFO     | intersect: -456639624.647416
[2026-03-14 19:45:10] 2026-03-14 23:44:03,332 | INFO     | chi2: 2.8892605288039137
[2026-03-14 19:45:10] 2026-03-14 23:44:03,332 | INFO     | current chi2=2.8892605288039137 (change=46.663168301638244 %)
[2026-03-14 19:45:10] 2026-03-14 23:44:03,335 | INFO     | sum of square deviations: 5948753674167.136
[2026-03-14 19:45:10] 2026-03-14 23:44:04,480 | INFO     | time since job start (163937s) is within the limit (345600.0s)
[2026-03-14 19:45:10] 2026-03-14 23:44:05,474 | INFO     | monitor loop #8307: job 0:7043489263 is in state 'finished'
[2026-03-14 19:45:10] 2026-03-14 23:44:05,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 19:45:10] 2026-03-14 23:44:05,530 | INFO     | sum of deviations: 1547307106333.0527
[2026-03-14 19:45:10] 2026-03-14 23:44:05,530 | INFO     | mean x: 1773449585.4934628
[2026-03-14 19:45:10] 2026-03-14 23:44:05,531 | INFO     | mean y: 2500436.8031378407
[2026-03-14 19:45:10] 2026-03-14 23:44:05,531 | INFO     | intersect: -458784614.93362445
[2026-03-14 19:45:10] 2026-03-14 23:44:05,788 | INFO     | chi2: 2.889160574387445
[2026-03-14 19:45:10] 2026-03-14 23:44:05,789 | INFO     | current chi2=2.889160574387445 (change=0.003459515522124751 %)
[2026-03-14 19:45:10] 2026-03-14 23:44:05,789 | INFO     | right removable region: 2676
[2026-03-14 19:45:10] 2026-03-14 23:44:05,880 | INFO     | sum of square deviations: 5982147798763.903
[2026-03-14 19:45:10] 2026-03-14 23:44:07,420 | INFO     | sum of deviations: 294188921029.4954
[2026-03-14 19:45:10] 2026-03-14 23:44:07,424 | INFO     | mean x: 1773450042.9940343
[2026-03-14 19:45:10] 2026-03-14 23:44:07,424 | INFO     | mean y: 2501091.2184936614
[2026-03-14 19:45:10] 2026-03-14 23:44:07,424 | INFO     | intersect: -84713296.02147602
[2026-03-14 19:45:10] 2026-03-14 23:44:07,435 | INFO     | chi2: 2.8967283832575506
[2026-03-14 19:45:10] 2026-03-14 23:44:07,436 | INFO     | current chi2=2.8967283832575506 (change=46.525308910915044 %)
[2026-03-14 19:45:10] 2026-03-14 23:44:07,448 | INFO     | sum of square deviations: 5948752712685.196
[2026-03-14 19:45:10] 2026-03-14 23:44:08,015 | INFO     | monitor loop #8308: job 0:7043489263 is in state 'finished'
[2026-03-14 19:45:10] 2026-03-14 23:44:08,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 19:45:10] 2026-03-14 23:44:08,593 | INFO     | sum of deviations: 47031887296.86719
[2026-03-14 19:45:10] 2026-03-14 23:44:08,594 | INFO     | mean x: 1773450195.494957
[2026-03-14 19:45:10] 2026-03-14 23:44:08,594 | INFO     | mean y: 2502219.619723571
[2026-03-14 19:45:10] 2026-03-14 23:44:08,594 | INFO     | intersect: -11518990.161490582
[2026-03-14 19:45:10] 2026-03-14 23:44:08,607 | INFO     | chi2: 2.5956863191808366
[2026-03-14 19:45:10] 2026-03-14 23:44:08,607 | INFO     | current chi2=2.5956863191808366 (change=10.392485046809032 %)
[2026-03-14 19:45:10] 2026-03-14 23:44:08,607 | INFO     | left removable region: 20
[2026-03-14 19:45:10] 2026-03-14 23:44:08,662 | INFO     | sum of square deviations: 5809851949833.951
[2026-03-14 19:45:10] 2026-03-14 23:44:09,242 | INFO     | sum of deviations: 527857797994.05066
[2026-03-14 19:45:10] 2026-03-14 23:44:09,243 | INFO     | mean x: 1773450164.996235
[2026-03-14 19:45:10] 2026-03-14 23:44:09,243 | INFO     | mean y: 2505115.9051204817
[2026-03-14 19:45:10] 2026-03-14 23:44:09,243 | INFO     | intersect: -158622827.97886324
[2026-03-14 19:45:10] 2026-03-14 23:44:09,247 | INFO     | chi2: 0.022157758013588533
[2026-03-14 19:45:10] 2026-03-14 23:44:09,247 | INFO     | current memory leak: 0.09 B/s (using 2656 data points, chi2=0.02)
[2026-03-14 19:45:10] 2026-03-14 23:44:09,250 | INFO     | could have reported an average CPU frequency of 2600 MHz (94 samples)
[2026-03-14 19:45:10] 2026-03-14 23:44:09,250 | INFO     | ..............................
[2026-03-14 19:45:10] 2026-03-14 23:44:09,250 | INFO     | . Timing measurements:
[2026-03-14 19:45:10] 2026-03-14 23:44:09,250 | INFO     | . get job = 0 s
[2026-03-14 19:45:10] 2026-03-14 23:44:09,250 | INFO     | . initial setup = 3 s
[2026-03-14 19:45:10] 2026-03-14 23:44:09,251 | INFO     | . payload setup = 35 s
[2026-03-14 19:45:10] 2026-03-14 23:44:09,251 | INFO     | . stage-in = 0 s
[2026-03-14 19:45:10] 2026-03-14 23:44:09,251 | INFO     | . payload execution = 163867 s
[2026-03-14 19:45:10] 2026-03-14 23:44:09,251 | INFO     | . stage-out = 11 s
[2026-03-14 19:45:10] 2026-03-14 23:44:09,251 | INFO     | . log creation = 4 s
[2026-03-14 19:45:10] 2026-03-14 23:44:09,251 | INFO     | ..............................
[2026-03-14 19:45:10] 2026-03-14 23:44:10,047 | INFO     | 
[2026-03-14 19:45:10] 2026-03-14 23:44:10,048 | INFO     | job summary report
[2026-03-14 19:45:10] 2026-03-14 23:44:10,048 | INFO     | --------------------------------------------------
[2026-03-14 19:45:10] 2026-03-14 23:44:10,048 | INFO     | PanDA job id: 7043489263
[2026-03-14 19:45:10] 2026-03-14 23:44:10,048 | INFO     | task id: 48955006
[2026-03-14 19:45:10] 2026-03-14 23:44:10,048 | INFO     | errors: (none)
[2026-03-14 19:45:10] 2026-03-14 23:44:10,048 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 19:45:10] 2026-03-14 23:44:10,048 | INFO     | pilot state: finished 
[2026-03-14 19:45:10] 2026-03-14 23:44:10,049 | INFO     | transexitcode: 0
[2026-03-14 19:45:10] 2026-03-14 23:44:10,049 | INFO     | exeerrorcode: 0
[2026-03-14 19:45:10] 2026-03-14 23:44:10,049 | INFO     | exeerrordiag: 
[2026-03-14 19:45:10] 2026-03-14 23:44:10,049 | INFO     | exitcode: 0
[2026-03-14 19:45:10] 2026-03-14 23:44:10,049 | INFO     | exitmsg: OK
[2026-03-14 19:45:10] 2026-03-14 23:44:10,049 | INFO     | cpuconsumptiontime: 46868 s
[2026-03-14 19:45:10] 2026-03-14 23:44:10,049 | INFO     | nevents: 400
[2026-03-14 19:45:10] 2026-03-14 23:44:10,049 | INFO     | neventsw: 0
[2026-03-14 19:45:10] 2026-03-14 23:44:10,049 | INFO     | pid: 2105565
[2026-03-14 19:45:10] 2026-03-14 23:44:10,049 | INFO     | pgrp: 2105565
[2026-03-14 19:45:10] 2026-03-14 23:44:10,050 | INFO     | corecount: 8
[2026-03-14 19:45:10] 2026-03-14 23:44:10,050 | INFO     | event service: False
[2026-03-14 19:45:10] 2026-03-14 23:44:10,050 | INFO     | sizes: {0: 2279741, 1: 2279825, 2: 2280286, 3: 2280286, 163911: 2377457, 163912: 2377456, 163925: 2386638, 163926: 2386694, 163940: 2386888}
[2026-03-14 19:45:10] 2026-03-14 23:44:10,050 | INFO     | --------------------------------------------------
[2026-03-14 19:45:10] 2026-03-14 23:44:10,050 | INFO     | 
[2026-03-14 19:45:10] 2026-03-14 23:44:10,050 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-14 19:45:10] 2026-03-14 23:44:10,274 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,275 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,275 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,275 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,276 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,276 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,277 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 19:45:10] 2026-03-14 23:44:10,277 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,277 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 19:45:10] 2026-03-14 23:44:10,277 | INFO     | job 7043489263 has completed (purged errors)
[2026-03-14 19:45:10] 2026-03-14 23:44:10,277 | INFO     | overall cleanup function is called
[2026-03-14 19:45:10] 2026-03-14 23:44:10,769 | INFO     | PID=2099676 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-14 19:45:10] 2026-03-14 23:44:10,769 | INFO     | .. there are 45 such processes running
[2026-03-14 19:45:10] 2026-03-14 23:44:11,288 | INFO     | --- collectZombieJob: --- 10, [2105565]
[2026-03-14 19:45:10] 2026-03-14 23:44:11,289 | INFO     | zombie collector waiting for pid 2105565
[2026-03-14 19:45:10] 2026-03-14 23:44:11,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 19:45:10] 2026-03-14 23:44:11,289 | INFO     | collected zombie processes
[2026-03-14 19:45:10] 2026-03-14 23:44:11,289 | INFO     | will attempt to kill all subprocesses of pid=2105565
[2026-03-14 19:45:10] 2026-03-14 23:44:14,770 | INFO     | process IDs to be killed: [2105565] (in reverse order)
[2026-03-14 19:45:10] 2026-03-14 23:44:15,391 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 19:45:10] 2026-03-14 23:44:15,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 19:45:10] 2026-03-14 23:44:15,489 | INFO     | did not find any defunct processes belonging to 2105565
[2026-03-14 19:45:10] 2026-03-14 23:44:15,613 | INFO     | did not find any defunct processes belonging to 2105565
[2026-03-14 19:45:10] 2026-03-14 23:44:15,613 | INFO     | ready for new job
[2026-03-14 19:45:10] 2026-03-14 23:44:15,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 19:45:10] 2026-03-14 23:44:15,624 | INFO     | **************************************
[2026-03-14 19:45:10] 2026-03-14 23:44:15,624 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 19:45:10] 2026-03-14 23:44:15,624 | INFO     | **************************************
[2026-03-14 19:45:10] 2026-03-14 23:44:15,625 | INFO     | 
[2026-03-14 19:45:10] 2026-03-14 23:44:15,626 | INFO     | architecture information:
[2026-03-14 19:45:10] 2026-03-14 23:44:15,664 | INFO     | executing command: cat /etc/os-release
[2026-03-14 19:45:10] 2026-03-14 23:44:15,926 | INFO     | cat /etc/os-release:
[2026-03-14 19:45:10] NAME="CentOS Linux"
[2026-03-14 19:45:10] VERSION="7 (Core)"
[2026-03-14 19:45:10] ID="centos"
[2026-03-14 19:45:10] ID_LIKE="rhel fedora"
[2026-03-14 19:45:10] VERSION_ID="7"
[2026-03-14 19:45:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 19:45:10] ANSI_COLOR="0;31"
[2026-03-14 19:45:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 19:45:10] HOME_URL="https://www.centos.org/"
[2026-03-14 19:45:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 19:45:10] 
[2026-03-14 19:45:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 19:45:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 19:45:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 19:45:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 19:45:10] 
[2026-03-14 19:45:10] 2026-03-14 23:44:15,926 | INFO     | **************************************
[2026-03-14 19:45:10] 2026-03-14 23:44:16,459 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-14 19:45:10] 2026-03-14 23:44:16,685 | INFO     | sufficient remaining disk space (72159854592 B)
[2026-03-14 19:45:10] 2026-03-14 23:44:16,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 19:45:10] 2026-03-14 23:44:16,685 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 19:45:10] 2026-03-14 23:44:16,686 | INFO     | update_server=False
[2026-03-14 19:45:10] 2026-03-14 23:44:16,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 19:45:10] 2026-03-14 23:44:16,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 19:45:10] 2026-03-14 23:44:16,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 19:45:10] 2026-03-14 23:44:16,727 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 19:45:10] 2026-03-14 23:44:16,727 | INFO     | aborting loop
[2026-03-14 19:45:10] 2026-03-14 23:44:16,764 | INFO     | all data control threads have been joined
[2026-03-14 19:45:10] 2026-03-14 23:44:17,486 | INFO     | all payload control threads have been joined
[2026-03-14 19:45:10] 2026-03-14 23:44:17,675 | INFO     | all job control threads have been joined
[2026-03-14 19:45:10] 2026-03-14 23:44:17,692 | INFO     | [job] retrieve thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:17,735 | INFO     | [job] job monitor thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:17,770 | INFO     | [data] control thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:18,303 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:18,473 | INFO     | [payload] failed_post thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:18,502 | INFO     | [payload] control thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:18,570 | INFO     | [payload] validate_post thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:18,580 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:18,660 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:18,682 | INFO     | [job] control thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:18,693 | INFO     | [data] copytool_in thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:18,708 | INFO     | [data] copytool_out thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:18,807 | INFO     | [job] validate thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:18,838 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:18,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 19:45:10] 2026-03-14 23:44:19,921 | INFO     | [job] queue monitor thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:20,720 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 19:45:10] 2026-03-14 23:44:46,077 | INFO     | PID=2099676 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 19:45:10] 2026-03-14 23:44:46,077 | INFO     | .. there are 45 such processes running
[2026-03-14 19:45:10] 2026-03-14 23:44:46,078 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 19:45:10] 2026-03-14 23:44:46,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 19:45:10] 2026-03-14 23:44:46,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 19:45:10] 2026-03-14 23:45:03,151 | INFO     | [monitor] cgroup control has ended
[2026-03-14 19:45:10] 2026-03-14 23:45:03,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794350397248)>', '<ExcThread(monitor, started 139793560217344)>']
[2026-03-14 19:45:10] 2026-03-14 23:45:04,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 19:45:10] 2026-03-14 23:45:04,266 | INFO     | [monitor] control thread has ended
[2026-03-14 19:45:10] 2026-03-14 23:45:08,454 | INFO     | all workflow threads have been joined
[2026-03-14 19:45:10] 2026-03-14 23:45:08,457 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 19:45:10] 2026-03-14 23:45:08,459 | INFO     | traces error code: 0
[2026-03-14 19:45:10] 2026-03-14 23:45:08,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 19:45:10] 2026-03-14 23:45:08,730 [wrapper] ==== pilot stdout END ====
[2026-03-14 19:45:10] 2026-03-14 23:45:08,732 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 19:45:10] 2026-03-14 23:45:08,734 [wrapper] pilotpid: 2099676
[2026-03-14 19:45:10] 2026-03-14 23:45:08,736 [wrapper] Pilot exit status: 0
[2026-03-14 19:45:10] 2026-03-14 23:45:08,872 [wrapper] pandaids: 7043489263 7043489263
[2026-03-14 19:45:10] 2026-03-14 23:45:09,057 [wrapper] cleanup supervisor_pilot 1456789 2099677
[2026-03-14 19:45:10] 2026-03-14 23:45:09,107 [wrapper] Test setup, not cleaning
[2026-03-14 19:45:10] 2026-03-14 23:45:09,122 [wrapper] apfmon messages muted
[2026-03-14 19:45:10] 2026-03-14 23:45:09,145 [wrapper] ==== wrapper stdout END ====
[2026-03-14 19:45:10] 2026-03-14 23:45:09,179 [wrapper] ==== wrapper stderr END ====
[2026-03-14 19:45:10]  *** Error codes and diagnostics ***
[2026-03-14 19:45:10]     "exeErrorCode": 0,
[2026-03-14 19:45:10]     "exeErrorDiag": "",
[2026-03-14 19:45:10]     "pilotErrorCode": 0,
[2026-03-14 19:45:10]     "pilotErrorDiag": "",
[2026-03-14 19:45:10]  *** Listing of results directory ***
[2026-03-14 19:45:10] total 1076048
[2026-03-14 19:45:10] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 15:23 queuedata.json
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 15:23 pilot3.tar.gz
[2026-03-14 19:45:10] -rwx------. 1 boincer umatlas     36322 Mar 12 15:24 runpilot2-wrapper.sh
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas       100 Mar 12 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 19:45:10] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 21:00 run_atlas
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas       105 Mar 12 21:00 job.xml
[2026-03-14 19:45:10] -rw-r--r--. 3 boincer umatlas 435547286 Mar 12 21:00 EVNT.46701403._000932.pool.root.1
[2026-03-14 19:45:10] -rw-r--r--. 3 boincer umatlas 435547286 Mar 12 21:00 ATLAS.root_0
[2026-03-14 19:45:10] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 21:00 start_atlas.sh
[2026-03-14 19:45:10] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 21:00 shared
[2026-03-14 19:45:10] -rw-r--r--. 2 boincer umatlas    597521 Mar 12 21:00 input.tar.gz
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas         0 Mar 12 21:00 boinc_lockfile
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas      2564 Mar 12 22:10 pandaJob.out
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas        57 Mar 12 22:10 setup.sh.local
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas   1006514 Mar 12 22:11 agis_schedconf.cvmfs.json
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas       439 Mar 12 22:11 workernode_map.json
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas      6659 Mar 14 19:39 init_data.xml
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas 185888660 Mar 14 19:40 HITS.48955006._047064.pool.root.1
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas       531 Mar 14 19:41 boinc_task_state.xml
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas      1055 Mar 14 19:43 memory_monitor_summary.json
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas   1511579 Mar 14 19:43 agis_ddmendpoints.agis.ALL.json
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas        96 Mar 14 19:43 pilot_heartbeat.json
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas   2159921 Mar 14 19:43 log.48955006._047064.job.log.tgz.1
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas      6418 Mar 14 19:44 heartbeat.json
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas      4820 Mar 14 19:45 pilotlog.txt
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas  18310165 Mar 14 19:45 log.48955006._047064.job.log.1
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas       357 Mar 14 19:45 output.list
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas        28 Mar 14 19:45 wrapper_checkpoint.txt
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas      8192 Mar 14 19:45 boinc_mmap_file
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas       620 Mar 14 19:45 runtime_log
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas  20490240 Mar 14 19:45 result.tar.gz
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas      9413 Mar 14 19:45 runtime_log.err
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas       787 Mar 14 19:45 NrzLDmto0K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4XnLDmZsAaNm.diag
[2026-03-14 19:45:10] -rw-r--r--. 1 boincer umatlas     23447 Mar 14 19:45 stderr.txt
[2026-03-14 19:45:10] HITS file was successfully produced:
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas 185888660 Mar 14 19:40 shared/HITS.pool.root.1
[2026-03-14 19:45:10]  *** Contents of shared directory: ***
[2026-03-14 19:45:10] total 627492
[2026-03-14 19:45:10] -rw-r--r--. 3 boincer umatlas 435547286 Mar 12 21:00 ATLAS.root_0
[2026-03-14 19:45:10] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 21:00 start_atlas.sh
[2026-03-14 19:45:10] -rw-r--r--. 2 boincer umatlas    597521 Mar 12 21:00 input.tar.gz
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas 185888660 Mar 14 19:40 HITS.pool.root.1
[2026-03-14 19:45:10] -rw-------. 1 boincer umatlas  20490240 Mar 14 19:45 result.tar.gz
19:45:12 (2090791): run_atlas exited; CPU time 55359.738884
19:45:12 (2090791): called boinc_finish(0)

</stderr_txt>
]]>

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