Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:11:08 (12256): wrapper (7.7.26015): starting
09:11:08 (12256): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 09:11:08] Arguments: --nthreads 8
[2026-03-13 09:11:08] Threads: 8
[2026-03-13 09:11:08] Checking for CVMFS
[2026-03-13 09:11:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 09:11:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 09:11:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 09:11:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 09:11:14] 2.11.2.0 20422 125877 136492 157232 1 156 23182265 25165825 4457 130560 162 28079640 99.794 25979659 900 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 09:11:14] CVMFS is ok
[2026-03-13 09:11:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 09:11:14] Checking for apptainer binary...
[2026-03-13 09:11:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 09:11:14] Running /usr/bin/apptainer --version
[2026-03-13 09:11:14] apptainer version 1.3.2-1.el7
[2026-03-13 09:11:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 09:11:38] cg-vwn357.simple-grid.lan
[2026-03-13 09:11:38] apptainer works
[2026-03-13 09:11:38] Set ATHENA_PROC_NUMBER=8
[2026-03-13 09:11:38] Set ATHENA_CORE_NUMBER=8
[2026-03-13 09:11:38] Starting ATLAS job with PandaID=7043488107
[2026-03-13 09:11:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 13:23:10]  *** The last 200 lines of the pilot log: ***
[2026-03-13 13:23:10] 2026-03-13 12:22:04,735 | INFO     | total number of processed events: 400 (read)
[2026-03-13 13:23:10] 2026-03-13 12:22:04,738 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-7043488107/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 13:23:10] 2026-03-13 12:22:04,738 | INFO     | extracted standard info from prmon json
[2026-03-13 13:23:10] 2026-03-13 12:22:04,739 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 13:23:10] 2026-03-13 12:22:04,739 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 13:23:10] 2026-03-13 12:22:04,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 13:23:10] 2026-03-13 12:22:04,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 13:23:10] 2026-03-13 12:22:04,744 | INFO     | fitting pss+swap vs Time
[2026-03-13 13:23:10] 2026-03-13 12:22:04,745 | INFO     | sum of square deviations: 4127772278.0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,747 | INFO     | sum of deviations: 37075848129.0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,748 | INFO     | mean x: 1773397258.0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,748 | INFO     | mean y: 2479577.080168776
[2026-03-13 13:23:10] 2026-03-13 12:22:04,748 | INFO     | intersect: -15926259457.392561
[2026-03-13 13:23:10] 2026-03-13 12:22:04,748 | INFO     | chi2: 6.573926066706663
[2026-03-13 13:23:10] 2026-03-13 12:22:04,749 | INFO     | sum of square deviations: 3871990738.0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,755 | INFO     | sum of deviations: 52969822231.5
[2026-03-13 13:23:10] 2026-03-13 12:22:04,756 | INFO     | mean x: 1773397105.5
[2026-03-13 13:23:10] 2026-03-13 12:22:04,756 | INFO     | mean y: 2488885.021551724
[2026-03-13 13:23:10] 2026-03-13 12:22:04,756 | INFO     | intersect: -24258036457.22467
[2026-03-13 13:23:10] 2026-03-13 12:22:04,756 | INFO     | chi2: 5.785218661746965
[2026-03-13 13:23:10] 2026-03-13 12:22:04,756 | INFO     | current chi2=5.785218661746965 (change=11.99750950887733 %)
[2026-03-13 13:23:10] 2026-03-13 12:22:04,757 | INFO     | right removable region: 231
[2026-03-13 13:23:10] 2026-03-13 12:22:04,757 | INFO     | sum of square deviations: 3871990738.0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,759 | INFO     | sum of deviations: -43708448797.5
[2026-03-13 13:23:10] 2026-03-13 12:22:04,759 | INFO     | mean x: 1773397410.5
[2026-03-13 13:23:10] 2026-03-13 12:22:04,760 | INFO     | mean y: 2527695.745689655
[2026-03-13 13:23:10] 2026-03-13 12:22:04,760 | INFO     | intersect: 20021286819.765667
[2026-03-13 13:23:10] 2026-03-13 12:22:04,760 | INFO     | chi2: 2.044225247230938
[2026-03-13 13:23:10] 2026-03-13 12:22:04,760 | INFO     | current chi2=2.044225247230938 (change=68.90404263011384 %)
[2026-03-13 13:23:10] 2026-03-13 12:22:04,761 | INFO     | sum of square deviations: 3627000098.0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,763 | INFO     | sum of deviations: -74470423026.99998
[2026-03-13 13:23:10] 2026-03-13 12:22:04,763 | INFO     | mean x: 1773397563.0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,763 | INFO     | mean y: 2546700.220264317
[2026-03-13 13:23:10] 2026-03-13 12:22:04,763 | INFO     | intersect: 36414364495.451225
[2026-03-13 13:23:10] 2026-03-13 12:22:04,764 | INFO     | chi2: 1.1048233732937829
[2026-03-13 13:23:10] 2026-03-13 12:22:04,764 | INFO     | current chi2=1.1048233732937829 (change=45.9539317014917 %)
[2026-03-13 13:23:10] 2026-03-13 12:22:04,765 | INFO     | sum of square deviations: 3392567795.5
[2026-03-13 13:23:10] 2026-03-13 12:22:04,767 | INFO     | sum of deviations: -73013604709.5
[2026-03-13 13:23:10] 2026-03-13 12:22:04,767 | INFO     | mean x: 1773397715.5
[2026-03-13 13:23:10] 2026-03-13 12:22:04,767 | INFO     | mean y: 2545716.238738739
[2026-03-13 13:23:10] 2026-03-13 12:22:04,767 | INFO     | intersect: 38168963485.10285
[2026-03-13 13:23:10] 2026-03-13 12:22:04,768 | INFO     | chi2: 1.0861774551989274
[2026-03-13 13:23:10] 2026-03-13 12:22:04,768 | INFO     | current chi2=1.0861774551989274 (change=1.6876831668818588 %)
[2026-03-13 13:23:10] 2026-03-13 12:22:04,768 | INFO     | left removable region: 30
[2026-03-13 13:23:10] 2026-03-13 12:22:04,768 | INFO     | sum of square deviations: 2518000700.0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,770 | INFO     | sum of deviations: -36030872500.99999
[2026-03-13 13:23:10] 2026-03-13 12:22:04,770 | INFO     | mean x: 1773397990.0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,770 | INFO     | mean y: 2542583.0945273633
[2026-03-13 13:23:10] 2026-03-13 12:22:04,771 | INFO     | intersect: 25378658193.87242
[2026-03-13 13:23:10] 2026-03-13 12:22:04,771 | INFO     | chi2: 0.18765933333970153
[2026-03-13 13:23:10] 2026-03-13 12:22:04,775 | INFO     | current memory leak: -14.31 B/s (using 201 data points, chi2=0.19)
[2026-03-13 13:23:10] 2026-03-13 12:22:04,776 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-03-13 13:23:10] 2026-03-13 12:22:04,776 | INFO     | ..............................
[2026-03-13 13:23:10] 2026-03-13 12:22:04,777 | INFO     | . Timing measurements:
[2026-03-13 13:23:10] 2026-03-13 12:22:04,777 | INFO     | . get job = 0 s
[2026-03-13 13:23:10] 2026-03-13 12:22:04,777 | INFO     | . initial setup = 104 s
[2026-03-13 13:23:10] 2026-03-13 12:22:04,777 | INFO     | . payload setup = 130 s
[2026-03-13 13:23:10] 2026-03-13 12:22:04,777 | INFO     | . stage-in = 0 s
[2026-03-13 13:23:10] 2026-03-13 12:22:04,777 | INFO     | . payload execution = 14573 s
[2026-03-13 13:23:10] 2026-03-13 12:22:04,777 | INFO     | . stage-out = 5 s
[2026-03-13 13:23:10] 2026-03-13 12:22:04,777 | INFO     | . log creation = 1 s
[2026-03-13 13:23:10] 2026-03-13 12:22:04,777 | INFO     | ..............................
[2026-03-13 13:23:10] 2026-03-13 12:22:04,922 | INFO     | 
[2026-03-13 13:23:10] 2026-03-13 12:22:04,922 | INFO     | job summary report
[2026-03-13 13:23:10] 2026-03-13 12:22:04,922 | INFO     | --------------------------------------------------
[2026-03-13 13:23:10] 2026-03-13 12:22:04,922 | INFO     | PanDA job id: 7043488107
[2026-03-13 13:23:10] 2026-03-13 12:22:04,922 | INFO     | task id: 48955010
[2026-03-13 13:23:10] 2026-03-13 12:22:04,923 | INFO     | errors: (none)
[2026-03-13 13:23:10] 2026-03-13 12:22:04,923 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 13:23:10] 2026-03-13 12:22:04,923 | INFO     | pilot state: finished 
[2026-03-13 13:23:10] 2026-03-13 12:22:04,923 | INFO     | transexitcode: 0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,923 | INFO     | exeerrorcode: 0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,923 | INFO     | exeerrordiag: 
[2026-03-13 13:23:10] 2026-03-13 12:22:04,923 | INFO     | exitcode: 0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,923 | INFO     | exitmsg: OK
[2026-03-13 13:23:10] 2026-03-13 12:22:04,923 | INFO     | cpuconsumptiontime: 54807 s
[2026-03-13 13:23:10] 2026-03-13 12:22:04,923 | INFO     | nevents: 400
[2026-03-13 13:23:10] 2026-03-13 12:22:04,924 | INFO     | neventsw: 0
[2026-03-13 13:23:10] 2026-03-13 12:22:04,924 | INFO     | pid: 20897
[2026-03-13 13:23:10] 2026-03-13 12:22:04,924 | INFO     | pgrp: 20897
[2026-03-13 13:23:10] 2026-03-13 12:22:04,924 | INFO     | corecount: 8
[2026-03-13 13:23:10] 2026-03-13 12:22:04,924 | INFO     | event service: False
[2026-03-13 13:23:10] 2026-03-13 12:22:04,924 | INFO     | sizes: {0: 2279739, 1: 2280200, 12: 2280200, 14708: 2310958, 14713: 2320014, 14717: 2320152}
[2026-03-13 13:23:10] 2026-03-13 12:22:04,924 | INFO     | --------------------------------------------------
[2026-03-13 13:23:10] 2026-03-13 12:22:04,924 | INFO     | 
[2026-03-13 13:23:10] 2026-03-13 12:22:04,925 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2026-03-13 13:23:10] 2026-03-13 12:22:05,156 | INFO     | PID=16345 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 13:23:10] 2026-03-13 12:22:05,156 | INFO     | .. there are 9 such processes running
[2026-03-13 13:23:10] 2026-03-13 12:22:05,393 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,393 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,393 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,393 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,394 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,394 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,394 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,395 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,395 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 13:23:10] 2026-03-13 12:22:05,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,395 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 13:23:10] 2026-03-13 12:22:05,395 | INFO     | job 7043488107 has completed (purged errors)
[2026-03-13 13:23:10] 2026-03-13 12:22:05,396 | INFO     | overall cleanup function is called
[2026-03-13 13:23:10] 2026-03-13 12:22:06,404 | INFO     | --- collectZombieJob: --- 10, [20897]
[2026-03-13 13:23:10] 2026-03-13 12:22:06,405 | INFO     | zombie collector waiting for pid 20897
[2026-03-13 13:23:10] 2026-03-13 12:22:06,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 13:23:10] 2026-03-13 12:22:06,405 | INFO     | collected zombie processes
[2026-03-13 13:23:10] 2026-03-13 12:22:06,405 | INFO     | will attempt to kill all subprocesses of pid=20897
[2026-03-13 13:23:10] 2026-03-13 12:22:06,516 | INFO     | process IDs to be killed: [20897] (in reverse order)
[2026-03-13 13:23:10] 2026-03-13 12:22:06,993 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 13:23:10] 2026-03-13 12:22:06,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 13:23:10] 2026-03-13 12:22:06,997 | INFO     | did not find any defunct processes belonging to 20897
[2026-03-13 13:23:10] 2026-03-13 12:22:07,000 | INFO     | did not find any defunct processes belonging to 20897
[2026-03-13 13:23:10] 2026-03-13 12:22:07,000 | INFO     | ready for new job
[2026-03-13 13:23:10] 2026-03-13 12:22:07,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 13:23:10] 2026-03-13 12:22:07,006 | INFO     | **************************************
[2026-03-13 13:23:10] 2026-03-13 12:22:07,006 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 13:23:10] 2026-03-13 12:22:07,006 | INFO     | **************************************
[2026-03-13 13:23:10] 2026-03-13 12:22:07,006 | INFO     | 
[2026-03-13 13:23:10] 2026-03-13 12:22:07,007 | INFO     | pilot is running in a VM
[2026-03-13 13:23:10] 2026-03-13 12:22:07,007 | INFO     | architecture information:
[2026-03-13 13:23:10] 2026-03-13 12:22:07,015 | INFO     | executing command: cat /etc/os-release
[2026-03-13 13:23:10] 2026-03-13 12:22:07,230 | INFO     | cat /etc/os-release:
[2026-03-13 13:23:10] NAME="CentOS Linux"
[2026-03-13 13:23:10] VERSION="7 (Core)"
[2026-03-13 13:23:10] ID="centos"
[2026-03-13 13:23:10] ID_LIKE="rhel fedora"
[2026-03-13 13:23:10] VERSION_ID="7"
[2026-03-13 13:23:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 13:23:10] ANSI_COLOR="0;31"
[2026-03-13 13:23:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 13:23:10] HOME_URL="https://www.centos.org/"
[2026-03-13 13:23:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 13:23:10] 
[2026-03-13 13:23:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 13:23:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 13:23:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 13:23:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 13:23:10] 
[2026-03-13 13:23:10] 2026-03-13 12:22:07,230 | INFO     | **************************************
[2026-03-13 13:23:10] 2026-03-13 12:22:07,734 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2026-03-13 13:23:10] 2026-03-13 12:22:07,914 | INFO     | sufficient remaining disk space (495273902080 B)
[2026-03-13 13:23:10] 2026-03-13 12:22:07,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 13:23:10] 2026-03-13 12:22:07,914 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 13:23:10] 2026-03-13 12:22:07,915 | INFO     | update_server=False
[2026-03-13 13:23:10] 2026-03-13 12:22:07,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 13:23:10] 2026-03-13 12:22:07,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 13:23:10] 2026-03-13 12:22:07,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 13:23:10] 2026-03-13 12:22:07,920 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 13:23:10] 2026-03-13 12:22:07,921 | INFO     | aborting loop
[2026-03-13 13:23:10] 2026-03-13 12:22:08,166 | INFO     | all data control threads have been joined
[2026-03-13 13:23:10] 2026-03-13 12:22:08,921 | INFO     | [job] retrieve thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:08,927 | INFO     | [job] job monitor thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:08,994 | INFO     | all payload control threads have been joined
[2026-03-13 13:23:10] 2026-03-13 12:22:09,026 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:09,075 | INFO     | [data] copytool_in thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:09,172 | INFO     | [data] control thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:09,287 | INFO     | all job control threads have been joined
[2026-03-13 13:23:10] 2026-03-13 12:22:09,588 | INFO     | [job] validate thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:09,922 | INFO     | [data] copytool_out thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:09,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 13:23:10] 2026-03-13 12:22:09,963 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:09,981 | INFO     | [payload] validate_post thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:09,999 | INFO     | [payload] control thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:10,158 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:10,293 | INFO     | [job] control thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:10,306 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:10,464 | INFO     | [payload] failed_post thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:10,944 | INFO     | [job] queue monitor thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:11,924 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 13:23:10] 2026-03-13 12:22:37,337 | INFO     | PID=16345 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 13:23:10] 2026-03-13 12:22:37,338 | INFO     | .. there are 9 such processes running
[2026-03-13 13:23:10] 2026-03-13 12:22:37,339 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 13:23:10] 2026-03-13 12:22:37,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 13:23:10] 2026-03-13 12:22:37,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 13:23:10] 2026-03-13 12:23:00,117 | INFO     | [monitor] cgroup control has ended
[2026-03-13 13:23:10] 2026-03-13 12:23:01,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140684771850048)>', '<ExcThread(monitor, started 140684178736896)>']
[2026-03-13 13:23:10] 2026-03-13 12:23:01,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 13:23:10] 2026-03-13 12:23:01,480 | INFO     | [monitor] control thread has ended
[2026-03-13 13:23:10] 2026-03-13 12:23:06,227 | INFO     | all workflow threads have been joined
[2026-03-13 13:23:10] 2026-03-13 12:23:06,228 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 13:23:10] 2026-03-13 12:23:06,228 | INFO     | traces error code: 0
[2026-03-13 13:23:10] 2026-03-13 12:23:06,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 13:23:10] 2026-03-13 12:23:06,705 [wrapper] ==== pilot stdout END ====
[2026-03-13 13:23:10] 2026-03-13 12:23:06,838 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 13:23:10] 2026-03-13 12:23:06,946 [wrapper] pilotpid: 16345
[2026-03-13 13:23:10] 2026-03-13 12:23:06,984 [wrapper] Pilot exit status: 0
[2026-03-13 13:23:10] 2026-03-13 12:23:07,385 [wrapper] pandaids: 7043488107
[2026-03-13 13:23:10] 2026-03-13 12:23:07,914 [wrapper] cleanup supervisor_pilot 27719 16346
[2026-03-13 13:23:10] 2026-03-13 12:23:08,016 [wrapper] Test setup, not cleaning
[2026-03-13 13:23:10] 2026-03-13 12:23:08,114 [wrapper] apfmon messages muted
[2026-03-13 13:23:10] 2026-03-13 12:23:08,167 [wrapper] ==== wrapper stdout END ====
[2026-03-13 13:23:10] 2026-03-13 12:23:08,253 [wrapper] ==== wrapper stderr END ====
[2026-03-13 13:23:10]  *** Error codes and diagnostics ***
[2026-03-13 13:23:10]     "exeErrorCode": 0,
[2026-03-13 13:23:10]     "exeErrorDiag": "",
[2026-03-13 13:23:10]     "pilotErrorCode": 0,
[2026-03-13 13:23:10]     "pilotErrorDiag": "",
[2026-03-13 13:23:10]  *** Listing of results directory ***
[2026-03-13 13:23:10] total 619900
[2026-03-13 13:23:10] -rwx------. 1 boinc boinc     36322 Mar 12 20:23 runpilot2-wrapper.sh
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc      5111 Mar 12 20:23 queuedata.json
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc    585013 Mar 12 20:23 pilot3.tar.gz
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc       100 Mar 13 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 13:23:10] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 09:11 run_atlas
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc       105 Mar 13 09:11 job.xml
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc      6392 Mar 13 09:11 init_data.xml
[2026-03-13 13:23:10] -rw-r--r--. 2 boinc boinc 437306506 Mar 13 09:11 EVNT.46701403._001493.pool.root.1
[2026-03-13 13:23:10] -rw-r--r--. 2 boinc boinc     15845 Mar 13 09:11 start_atlas.sh
[2026-03-13 13:23:10] drwxrwx--x. 2 boinc boinc        68 Mar 13 09:11 shared
[2026-03-13 13:23:10] -rw-r--r--. 2 boinc boinc    597514 Mar 13 09:11 input.tar.gz
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc         0 Mar 13 09:11 boinc_lockfile
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc      2559 Mar 13 09:11 pandaJob.out
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc       415 Mar 13 09:16 workernode_map.json
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc   1006506 Mar 13 09:16 agis_schedconf.cvmfs.json
[2026-03-13 13:23:10] drwx------. 5 boinc boinc      4096 Mar 13 09:16 pilot3
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc 188543901 Mar 13 13:20 HITS.48955010._024920.pool.root.1
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc       532 Mar 13 13:20 boinc_task_state.xml
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc      1015 Mar 13 13:21 memory_monitor_summary.json
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc   1511578 Mar 13 13:21 agis_ddmendpoints.agis.ALL.json
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc    449447 Mar 13 13:22 log.48955010._024920.job.log.tgz.1
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc      6326 Mar 13 13:22 heartbeat.json
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc        95 Mar 13 13:22 pilot_heartbeat.json
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc        28 Mar 13 13:22 wrapper_checkpoint.txt
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc      8192 Mar 13 13:22 boinc_mmap_file
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc      4881 Mar 13 13:23 pilotlog.txt
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc   2053120 Mar 13 13:23 log.48955010._024920.job.log.1
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc       357 Mar 13 13:23 output.list
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc       620 Mar 13 13:23 runtime_log
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc   2519040 Mar 13 13:23 result.tar.gz
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc       656 Mar 13 13:23 sgoLDmjn0K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5WnLDmarGdzm.diag
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc      8832 Mar 13 13:23 runtime_log.err
[2026-03-13 13:23:10] -rw-r--r--. 1 boinc boinc     20780 Mar 13 13:23 stderr.txt
[2026-03-13 13:23:10] HITS file was successfully produced:
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc 188543901 Mar 13 13:20 shared/HITS.pool.root.1
[2026-03-13 13:23:10]  *** Contents of shared directory: ***
[2026-03-13 13:23:10] total 614248
[2026-03-13 13:23:10] -rw-r--r--. 2 boinc boinc 437306506 Mar 13 09:11 ATLAS.root_0
[2026-03-13 13:23:10] -rw-r--r--. 2 boinc boinc     15845 Mar 13 09:11 start_atlas.sh
[2026-03-13 13:23:10] -rw-r--r--. 2 boinc boinc    597514 Mar 13 09:11 input.tar.gz
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc 188543901 Mar 13 13:20 HITS.pool.root.1
[2026-03-13 13:23:10] -rw-------. 1 boinc boinc   2519040 Mar 13 13:23 result.tar.gz
13:23:12 (12256): run_atlas exited; CPU time 55038.943807
13:23:12 (12256): called boinc_finish(0)

</stderr_txt>
]]>

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