Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:21:43 (317636): wrapper (7.7.26015): starting
21:21:43 (317636): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 21:21:43] Arguments: --nthreads 12
[2026-03-12 21:21:43] Threads: 12
[2026-03-12 21:21:43] Checking for CVMFS
[2026-03-12 21:21:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 21:21:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 21:21:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 21:21:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 21:21:45] 2.11.5.0 3841276 146769 255124 157227 2 343 40057884 45568001 22476 130560 0 1369164267 99.826 695267510 20229 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-12 21:21:45] CVMFS is ok
[2026-03-12 21:21:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 21:21:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 21:21:45] Further information can be found at the LHC@home message board.
[2026-03-12 21:21:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 21:21:45] Checking for apptainer binary...
[2026-03-12 21:21:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 21:21:45] Running /usr/bin/apptainer --version
[2026-03-12 21:21:45] apptainer version 1.4.1-1.el9
[2026-03-12 21:21:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 21:21:45] wns0064.triumf.lcg
[2026-03-12 21:21:45] apptainer works
[2026-03-12 21:21:45] Set ATHENA_PROC_NUMBER=12
[2026-03-12 21:21:45] Set ATHENA_CORE_NUMBER=12
[2026-03-12 21:21:46] Starting ATLAS job with PandaID=7043636538
[2026-03-12 21:21:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 21:26:28]  *** The last 200 lines of the pilot log: ***
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | INFO     | will not add max space = 0 B to job metrics
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | WARNING  | wrong length of table data, x=[1773375779.0], y=[1766.0] (must be same and length>=4)
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | could have reported an average CPU frequency of 2786 MHz (4 samples)
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | ..............................
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . Timing measurements:
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . get job = 0 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . initial setup = 16 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . payload setup = 15 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . stage-in = 0 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . payload execution = 30 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . stage-out = 0 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . log creation = 0 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | ..............................
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 21:26:28] 2026-03-13 04:25:21,913 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043636538/pilotlog.txt
[2026-03-12 21:26:28] 2026-03-13 04:25:22,008 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-12 21:26:28] - Log from pilotlog.txt -
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | WARNING  | found no stored workdir sizes
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | INFO     | will not add max space = 0 B to job metrics
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | WARNING  | wrong length of table data, x=[1773375779.0], y=[1766.0] (must be same and length>=4)
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | could have reported an average CPU frequency of 2786 MHz (4 samples)
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | ..............................
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . Timing measurements:
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . get job = 0 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . initial setup = 16 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . payload setup = 15 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . stage-in = 0 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . payload execution = 30 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . stage-out = 0 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . log creation = 0 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | ..............................
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 21:26:28] 2026-03-13 04:25:21,913 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043636538/pilotlog.txt
[2026-03-12 21:26:28] 2026-03-13 04:25:22,008 | WARNING  | 
[2026-03-12 21:26:28] [begin log extracts]
[2026-03-12 21:26:28] - Log from pilotlog.txt -
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | WARNING  | found no stored workdir sizes
[2026-03-12 21:26:28] 2026-03-13 04:25:21,893 | INFO     | will not add max space = 0 B to job metrics
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | WARNING  | wrong length of table data, x=[1773375779.0], y=[1766.0] (must be same and length>=4)
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | could have reported an average CPU frequency of 2786 MHz (4 samples)
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | ..............................
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . Timing measurements:
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . get job = 0 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . initial setup = 16 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . payload setup = 15 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . stage-in = 0 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . payload execution = 30 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . stage-out = 0 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | . log creation = 0 s
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | ..............................
[2026-03-12 21:26:28] 2026-03-13 04:25:21,894 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 21:26:28] 2026-03-13 04:25:21,913 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043636538/pilotlog.txt
[2026-03-12 21:26:28] [end log extracts]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,008 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-12 21:26:28] 2026-03-13 04:25:22,009 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | 
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | job summary report
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | --------------------------------------------------
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | PanDA job id: 7043636538
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | task id: 48955006
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-12 21:23:15,115 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | pilot state: failed 
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | transexitcode: 65
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | exeerrorcode: 65
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | exitcode: 65
[2026-03-12 21:26:28] 2026-03-13 04:25:22,163 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 21:26:28] 2026-03-13 04:25:22,164 | INFO     | cpuconsumptiontime: 14 s
[2026-03-12 21:26:28] 2026-03-13 04:25:22,164 | INFO     | nevents: 0
[2026-03-12 21:26:28] 2026-03-13 04:25:22,164 | INFO     | neventsw: 0
[2026-03-12 21:26:28] 2026-03-13 04:25:22,164 | INFO     | pid: 341002
[2026-03-12 21:26:28] 2026-03-13 04:25:22,164 | INFO     | pgrp: 341002
[2026-03-12 21:26:28] 2026-03-13 04:25:22,164 | INFO     | corecount: 12
[2026-03-12 21:26:28] 2026-03-13 04:25:22,164 | INFO     | event service: False
[2026-03-12 21:26:28] 2026-03-13 04:25:22,164 | INFO     | sizes: {0: 2280227, 11: 2280227, 49: 2303437, 50: 2307733, 168: 2307871}
[2026-03-12 21:26:28] 2026-03-13 04:25:22,164 | INFO     | --------------------------------------------------
[2026-03-12 21:26:28] 2026-03-13 04:25:22,164 | INFO     | 
[2026-03-12 21:26:28] 2026-03-13 04:25:22,164 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-12 21:26:28] 2026-03-13 04:25:22,182 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 21:26:28] 2026-03-13 04:25:22,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,184 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 21:26:28] 2026-03-13 04:25:22,184 | INFO     | job 7043636538 has completed (purged errors)
[2026-03-12 21:26:28] 2026-03-13 04:25:22,184 | INFO     | overall cleanup function is called
[2026-03-12 21:26:28] 2026-03-13 04:25:22,973 | INFO     | PID=326876 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 21:26:28] 2026-03-13 04:25:22,973 | INFO     | .. there are 35 such processes running
[2026-03-12 21:26:28] 2026-03-13 04:25:23,201 | INFO     | --- collectZombieJob: --- 10, [341002]
[2026-03-12 21:26:28] 2026-03-13 04:25:23,201 | INFO     | zombie collector waiting for pid 341002
[2026-03-12 21:26:28] 2026-03-13 04:25:23,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 21:26:28] 2026-03-13 04:25:23,201 | INFO     | collected zombie processes
[2026-03-12 21:26:28] 2026-03-13 04:25:23,202 | INFO     | will attempt to kill all subprocesses of pid=341002
[2026-03-12 21:26:28] 2026-03-13 04:25:23,492 | INFO     | process IDs to be killed: [341002] (in reverse order)
[2026-03-12 21:26:28] 2026-03-13 04:25:23,567 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 21:26:28] 2026-03-13 04:25:23,568 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 21:26:28] 2026-03-13 04:25:23,606 | INFO     | did not find any defunct processes belonging to 341002
[2026-03-12 21:26:28] 2026-03-13 04:25:23,640 | INFO     | did not find any defunct processes belonging to 341002
[2026-03-12 21:26:28] 2026-03-13 04:25:23,651 | INFO     | ready for new job
[2026-03-12 21:26:28] 2026-03-13 04:25:23,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 21:26:28] 2026-03-13 04:25:23,653 | INFO     | **************************************
[2026-03-12 21:26:28] 2026-03-13 04:25:23,653 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 21:26:28] 2026-03-13 04:25:23,653 | INFO     | **************************************
[2026-03-12 21:26:28] 2026-03-13 04:25:23,653 | INFO     | 
[2026-03-12 21:26:28] 2026-03-13 04:25:23,666 | INFO     | architecture information:
[2026-03-12 21:26:28] 2026-03-13 04:25:23,670 | INFO     | executing command: cat /etc/os-release
[2026-03-12 21:26:28] 2026-03-13 04:25:23,777 | INFO     | cat /etc/os-release:
[2026-03-12 21:26:28] NAME="CentOS Linux"
[2026-03-12 21:26:28] VERSION="7 (Core)"
[2026-03-12 21:26:28] ID="centos"
[2026-03-12 21:26:28] ID_LIKE="rhel fedora"
[2026-03-12 21:26:28] VERSION_ID="7"
[2026-03-12 21:26:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 21:26:28] ANSI_COLOR="0;31"
[2026-03-12 21:26:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 21:26:28] HOME_URL="https://www.centos.org/"
[2026-03-12 21:26:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 21:26:28] 
[2026-03-12 21:26:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 21:26:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 21:26:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 21:26:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 21:26:28] 
[2026-03-12 21:26:28] 2026-03-13 04:25:23,777 | INFO     | **************************************
[2026-03-12 21:26:28] 2026-03-13 04:25:24,281 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-12 21:26:28] 2026-03-13 04:25:24,373 | INFO     | sufficient remaining disk space (2111803752448 B)
[2026-03-12 21:26:28] 2026-03-13 04:25:24,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 21:26:28] 2026-03-13 04:25:24,373 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 21:26:28] 2026-03-13 04:25:24,373 | INFO     | update_server=False
[2026-03-12 21:26:28] 2026-03-13 04:25:24,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 21:26:28] 2026-03-13 04:25:24,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 21:26:28] 2026-03-13 04:25:24,610 | INFO     | aborting loop
[2026-03-12 21:26:28] 2026-03-13 04:25:24,899 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 21:26:28] 2026-03-13 04:25:24,923 | INFO     | all payload control threads have been joined
[2026-03-12 21:26:28] 2026-03-13 04:25:25,275 | INFO     | all data control threads have been joined
[2026-03-12 21:26:28] 2026-03-13 04:25:25,380 | INFO     | [job] retrieve thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:25,420 | INFO     | all job control threads have been joined
[2026-03-12 21:26:28] 2026-03-13 04:25:25,616 | INFO     | [job] job monitor thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:25,929 | INFO     | [payload] control thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:26,075 | INFO     | [job] validate thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:26,130 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:26,199 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:26,281 | INFO     | [data] control thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:26,382 | INFO     | [payload] validate_post thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:26,427 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:26,429 | INFO     | [job] control thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:26,582 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:26,663 | INFO     | [data] copytool_in thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:26,839 | INFO     | [payload] failed_post thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:26,907 | INFO     | [data] copytool_out thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:27,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 21:26:28] 2026-03-13 04:25:27,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 21:26:28] 2026-03-13 04:25:28,185 | INFO     | [job] queue monitor thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:31,405 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 21:26:28] 2026-03-13 04:25:56,168 | INFO     | PID=326876 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 21:26:28] 2026-03-13 04:25:56,168 | INFO     | .. there are 35 such processes running
[2026-03-12 21:26:28] 2026-03-13 04:25:56,178 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 21:26:28] 2026-03-13 04:25:56,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 21:26:28] 2026-03-13 04:25:56,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 21:26:28] 2026-03-13 04:26:22,371 | INFO     | [monitor] cgroup control has ended
[2026-03-12 21:26:28] 2026-03-13 04:26:22,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140076040333120)>', '<ExcThread(monitor, started 140075014792960)>']
[2026-03-12 21:26:28] 2026-03-13 04:26:23,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 21:26:28] 2026-03-13 04:26:23,339 | INFO     | [monitor] control thread has ended
[2026-03-12 21:26:28] 2026-03-13 04:26:27,995 | INFO     | all workflow threads have been joined
[2026-03-12 21:26:28] 2026-03-13 04:26:27,995 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 21:26:28] 2026-03-13 04:26:27,995 | INFO     | traces error code: 0
[2026-03-12 21:26:28] 2026-03-13 04:26:27,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 21:26:28] 2026-03-13 04:26:28,141 [wrapper] ==== pilot stdout END ====
[2026-03-12 21:26:28] 2026-03-13 04:26:28,144 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 21:26:28] 2026-03-13 04:26:28,147 [wrapper] pilotpid: 326876
[2026-03-12 21:26:28] 2026-03-13 04:26:28,153 [wrapper] Pilot exit status: 0
[2026-03-12 21:26:28] 2026-03-13 04:26:28,164 [wrapper] pandaids: 7043636538
[2026-03-12 21:26:28] 2026-03-13 04:26:28,210 [wrapper] cleanup supervisor_pilot  326907 326877
[2026-03-12 21:26:28] 2026-03-13 04:26:28,216 [wrapper] Test setup, not cleaning
[2026-03-12 21:26:28] 2026-03-13 04:26:28,219 [wrapper] apfmon messages muted
[2026-03-12 21:26:28] 2026-03-13 04:26:28,220 [wrapper] ==== wrapper stdout END ====
[2026-03-12 21:26:28] 2026-03-13 04:26:28,222 [wrapper] ==== wrapper stderr END ====
[2026-03-12 21:26:28]  *** Error codes and diagnostics ***
[2026-03-12 21:26:28]     "exeErrorCode": 65,
[2026-03-12 21:26:28]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 21:26:28]     "pilotErrorCode": 1305,
[2026-03-12 21:26:28]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 21:26:28]  *** Listing of results directory ***
[2026-03-12 21:26:28] total 430268
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc    585013 Mar 12 16:01 pilot3.tar.gz
[2026-03-12 21:26:28] -rwx------. 1 boinc boinc     36322 Mar 12 16:02 runpilot2-wrapper.sh
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc      5111 Mar 12 16:03 queuedata.json
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc       100 Mar 12 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 21:26:28] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 21:21 run_atlas
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc       105 Mar 12 21:21 job.xml
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc      6594 Mar 12 21:21 init_data.xml
[2026-03-12 21:26:28] -rw-r--r--. 2 boinc boinc 436451781 Mar 12 21:21 EVNT.46701403._000979.pool.root.1
[2026-03-12 21:26:28] -rw-r--r--. 2 boinc boinc     15845 Mar 12 21:21 start_atlas.sh
[2026-03-12 21:26:28] drwxrwx--x. 2 boinc boinc      4096 Mar 12 21:21 shared
[2026-03-12 21:26:28] -rw-r--r--. 2 boinc boinc    597528 Mar 12 21:21 input.tar.gz
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc         0 Mar 12 21:21 boinc_lockfile
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc      2564 Mar 12 21:21 pandaJob.out
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc   1006514 Mar 12 21:22 agis_schedconf.cvmfs.json
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc   1511578 Mar 12 21:22 agis_ddmendpoints.agis.ALL.json
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc       444 Mar 12 21:22 workernode_map.json
[2026-03-12 21:26:28] drwx------. 5 boinc boinc      4096 Mar 12 21:22 pilot3
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc       963 Mar 12 21:23 memory_monitor_summary.json
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc     21346 Mar 12 21:23 log.48955006._049441.job.log.tgz.1
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc        95 Mar 12 21:25 pilot_heartbeat.json
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc      7014 Mar 12 21:25 heartbeat.json
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc       523 Mar 12 21:26 boinc_task_state.xml
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc        22 Mar 12 21:26 wrapper_checkpoint.txt
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc      8192 Mar 12 21:26 boinc_mmap_file
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc      4818 Mar 12 21:26 pilotlog.txt
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc     82394 Mar 12 21:26 log.48955006._049441.job.log.1
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc       188 Mar 12 21:26 output.list
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc       620 Mar 12 21:26 runtime_log
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc    122880 Mar 12 21:26 result.tar.gz
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc       646 Mar 12 21:26 UuSNDm5D4K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmLZlLDm4bzjFn.diag
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc      8635 Mar 12 21:26 runtime_log.err
[2026-03-12 21:26:28] -rw-r--r--. 1 boinc boinc     21735 Mar 12 21:26 stderr.txt
[2026-03-12 21:26:28] No HITS result produced
[2026-03-12 21:26:28]  *** Contents of shared directory: ***
[2026-03-12 21:26:28] total 426948
[2026-03-12 21:26:28] -rw-r--r--. 2 boinc boinc 436451781 Mar 12 21:21 ATLAS.root_0
[2026-03-12 21:26:28] -rw-r--r--. 2 boinc boinc     15845 Mar 12 21:21 start_atlas.sh
[2026-03-12 21:26:28] -rw-r--r--. 2 boinc boinc    597528 Mar 12 21:21 input.tar.gz
[2026-03-12 21:26:28] -rw-------. 1 boinc boinc    122880 Mar 12 21:26 result.tar.gz
21:26:30 (317636): run_atlas exited; CPU time 19.222088
21:26:30 (317636): called boinc_finish(0)

</stderr_txt>
]]>

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