Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:37:32 (3546984): wrapper (7.7.26015): starting
02:37:32 (3546984): wrapper: running run_atlas (--nthreads 3)
[2026-03-14 02:37:32] Arguments: --nthreads 3
[2026-03-14 02:37:32] Threads: 3
[2026-03-14 02:37:32] Checking for CVMFS
[2026-03-14 02:37:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 02:37:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 02:37:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 02:37:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 02:37:34] 2.9.2.0 77542 23672 92616 157260 1 50 25520559 36864001 0 130560 0 9213033 99.982 899020 12285 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 02:37:34] CVMFS is ok
[2026-03-14 02:37:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 02:37:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 02:37:34] Further information can be found at the LHC@home message board.
[2026-03-14 02:37:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 02:37:34] Checking for apptainer binary...
[2026-03-14 02:37:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 02:37:34] Running /usr/bin/apptainer --version
[2026-03-14 02:37:34] apptainer version 1.4.1-1.1
[2026-03-14 02:37:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 02:37:34] thA312
[2026-03-14 02:37:34] apptainer works
[2026-03-14 02:37:35] Set ATHENA_PROC_NUMBER=3
[2026-03-14 02:37:35] Set ATHENA_CORE_NUMBER=3
[2026-03-14 02:37:35] Starting ATLAS job with PandaID=7050005429
[2026-03-14 02:37:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 04:32:59]  *** The last 200 lines of the pilot log: ***
[2026-03-14 04:32:59] 2026-03-14 03:31:55,588 | INFO     | sufficient remaining disk space (329466773504 B)
[2026-03-14 04:32:59] 2026-03-14 03:31:55,589 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 04:32:59] 2026-03-14 03:31:55,589 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7050005429/HITS.48997926._002857.pool.root.1 since it does not exist
[2026-03-14 04:32:59] 2026-03-14 03:31:55,626 | INFO     | number of running child processes to parent process 3555451: 1
[2026-03-14 04:32:59] 2026-03-14 03:31:55,626 | INFO     | maximum number of monitored processes: 6
[2026-03-14 04:32:59] 2026-03-14 03:31:55,626 | INFO     | aborting job monitoring since job object (job id=7050005429) has expired
[2026-03-14 04:32:59] 2026-03-14 03:31:55,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 04:32:59] 2026-03-14 03:31:55,626 | INFO     | will abort loop
[2026-03-14 04:32:59] 2026-03-14 03:31:55,753 | INFO     | all data control threads have been joined
[2026-03-14 04:32:59] 2026-03-14 03:31:55,840 | INFO     | [job] queue monitor thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:55,840 | INFO     | [job] retrieve thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:55,840 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:55,884 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:55,962 | INFO     | [data] copytool_in thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:56,055 | INFO     | all payload control threads have been joined
[2026-03-14 04:32:59] 2026-03-14 03:31:56,256 | INFO     | all job control threads have been joined
[2026-03-14 04:32:59] 2026-03-14 03:31:56,289 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:56,311 | INFO     | [payload] validate_post thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:56,414 | INFO     | [payload] failed_post thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:56,632 | INFO     | [job] job monitor thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:56,759 | INFO     | [data] control thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:57,010 | INFO     | [data] copytool_out thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:57,061 | INFO     | [payload] control thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:57,216 | INFO     | [job] validate thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:57,262 | INFO     | [job] control thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:57,301 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:31:58,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 04:32:59] 2026-03-14 03:32:02,301 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 04:32:59] 2026-03-14 03:32:25,405 | INFO     | PID=3551026 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 04:32:59] 2026-03-14 03:32:25,405 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 04:32:59] 2026-03-14 03:32:25,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 04:32:59] 2026-03-14 03:32:25,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 04:32:59] 2026-03-14 03:32:53,039 | INFO     | [monitor] cgroup control has ended
[2026-03-14 04:32:59] 2026-03-14 03:32:54,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139843484731200)>', '<ExcThread(monitor, started 139842834908928)>']
[2026-03-14 04:32:59] 2026-03-14 03:32:55,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 04:32:59] 2026-03-14 03:32:55,564 | INFO     | [monitor] control thread has ended
[2026-03-14 04:32:59] 2026-03-14 03:32:59,651 | INFO     | all workflow threads have been joined
[2026-03-14 04:32:59] 2026-03-14 03:32:59,652 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 04:32:59] 2026-03-14 03:32:59,652 | INFO     | traces error code: 0
[2026-03-14 04:32:59] 2026-03-14 03:32:59,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 04:32:59] 2026-03-14 03:32:59,702 [wrapper] ==== pilot stdout END ====
[2026-03-14 04:32:59] 2026-03-14 03:32:59,705 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 04:32:59] 2026-03-14 03:32:59,707 [wrapper] pilotpid: 3551026
[2026-03-14 04:32:59] 2026-03-14 03:32:59,710 [wrapper] Pilot exit status: 0
[2026-03-14 04:32:59] 2026-03-14 03:32:59,717 [wrapper] pandaids: 7050005429
[2026-03-14 04:32:59] 2026-03-14 03:32:59,733 [wrapper] cleanup supervisor_pilot 3561016 3551027
[2026-03-14 04:32:59] 2026-03-14 03:32:59,736 [wrapper] Test setup, not cleaning
[2026-03-14 04:32:59] 2026-03-14 03:32:59,738 [wrapper] apfmon messages muted
[2026-03-14 04:32:59] 2026-03-14 03:32:59,740 [wrapper] ==== wrapper stdout END ====
[2026-03-14 04:32:59] 2026-03-14 03:32:59,742 [wrapper] ==== wrapper stderr END ====
[2026-03-14 04:32:59]  *** Error codes and diagnostics ***
[2026-03-14 04:32:59]     "exeErrorCode": 0,
[2026-03-14 04:32:59]     "exeErrorDiag": "",
[2026-03-14 04:32:59]     "pilotErrorCode": 0,
[2026-03-14 04:32:59]     "pilotErrorDiag": "",
[2026-03-14 04:32:59]  *** Listing of results directory ***
[2026-03-14 04:32:59] total 597856
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc    585013 Mar 11 18:00 pilot3.tar.gz
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc      5111 Mar 11 18:02 queuedata.json
[2026-03-14 04:32:59] -rwx------ 1 boinc boinc     36322 Mar 11 18:03 runpilot2-wrapper.sh
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc       100 Mar 14 02:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 04:32:59] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 02:37 run_atlas
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc       105 Mar 14 02:37 job.xml
[2026-03-14 04:32:59] -rw-r--r-- 2 boinc boinc 340276172 Mar 14 02:37 EVNT.48997924._000110.pool.root.1
[2026-03-14 04:32:59] -rw-r--r-- 2 boinc boinc    597544 Mar 14 02:37 input.tar.gz
[2026-03-14 04:32:59] -rw-r--r-- 2 boinc boinc     15845 Mar 14 02:37 start_atlas.sh
[2026-03-14 04:32:59] drwxrwx--x 2 boinc boinc      4096 Mar 14 02:37 shared
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc         0 Mar 14 02:37 boinc_setup_complete
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc      6438 Mar 14 02:37 init_data.xml
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc         0 Mar 14 02:37 boinc_lockfile
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc      2585 Mar 14 02:37 pandaJob.out
[2026-03-14 04:32:59] -rw------- 1 boinc boinc   1006713 Mar 14 02:37 agis_schedconf.cvmfs.json
[2026-03-14 04:32:59] -rw------- 1 boinc boinc   1511579 Mar 14 02:37 agis_ddmendpoints.agis.ALL.json
[2026-03-14 04:32:59] -rw------- 1 boinc boinc       419 Mar 14 02:37 workernode_map.json
[2026-03-14 04:32:59] drwx------ 5 boinc boinc      4096 Mar 14 02:37 pilot3
[2026-03-14 04:32:59] -rw------- 1 boinc boinc 265464542 Mar 14 04:31 HITS.48997926._002857.pool.root.1
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc       529 Mar 14 04:31 boinc_task_state.xml
[2026-03-14 04:32:59] -rw------- 1 boinc boinc      1020 Mar 14 04:31 memory_monitor_summary.json
[2026-03-14 04:32:59] -rw------- 1 boinc boinc    285545 Mar 14 04:31 log.48997926._002857.job.log.tgz.1
[2026-03-14 04:32:59] -rw------- 1 boinc boinc      6303 Mar 14 04:31 heartbeat.json
[2026-03-14 04:32:59] -rw------- 1 boinc boinc        95 Mar 14 04:32 pilot_heartbeat.json
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc        27 Mar 14 04:32 wrapper_checkpoint.txt
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc      8192 Mar 14 04:32 boinc_mmap_file
[2026-03-14 04:32:59] -rw------- 1 boinc boinc      6321 Mar 14 04:32 pilotlog.txt
[2026-03-14 04:32:59] -rw------- 1 boinc boinc    986651 Mar 14 04:32 log.48997926._002857.job.log.1
[2026-03-14 04:32:59] -rw------- 1 boinc boinc       357 Mar 14 04:32 output.list
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc       620 Mar 14 04:32 runtime_log
[2026-03-14 04:32:59] -rw------- 1 boinc boinc   1290240 Mar 14 04:32 result.tar.gz
[2026-03-14 04:32:59] -rw------- 1 boinc boinc       657 Mar 14 04:32 uBwMDmC9bK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzQkLDm2I2mhn.diag
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc      8896 Mar 14 04:32 runtime_log.err
[2026-03-14 04:32:59] -rw-r--r-- 1 boinc boinc      7736 Mar 14 04:32 stderr.txt
[2026-03-14 04:32:59] HITS file was successfully produced:
[2026-03-14 04:32:59] -rw------- 1 boinc boinc 265464542 Mar 14 04:31 shared/HITS.pool.root.1
[2026-03-14 04:32:59]  *** Contents of shared directory: ***
[2026-03-14 04:32:59] total 593416
[2026-03-14 04:32:59] -rw-r--r-- 2 boinc boinc 340276172 Mar 14 02:37 ATLAS.root_0
[2026-03-14 04:32:59] -rw-r--r-- 2 boinc boinc    597544 Mar 14 02:37 input.tar.gz
[2026-03-14 04:32:59] -rw-r--r-- 2 boinc boinc     15845 Mar 14 02:37 start_atlas.sh
[2026-03-14 04:32:59] -rw------- 1 boinc boinc 265464542 Mar 14 04:31 HITS.pool.root.1
[2026-03-14 04:32:59] -rw------- 1 boinc boinc   1290240 Mar 14 04:32 result.tar.gz
04:33:00 (3546984): run_atlas exited; CPU time 19804.970224
04:33:00 (3546984): called boinc_finish(0)

</stderr_txt>
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