Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:26:22 (592838): wrapper (7.7.26015): starting
21:26:22 (592838): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 21:26:22] Arguments: --nthreads 12
[2026-03-12 21:26:22] Threads: 12
[2026-03-12 21:26:22] Checking for CVMFS
[2026-03-12 21:26:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 21:26:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 21:26:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 21:26:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 21:26:26] 2.11.5.0 3810059 146774 246696 157227 1 231 35631511 45568001 26827 130560 0 941036816 99.813 542640442 18407 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-03-12 21:26:26] CVMFS is ok
[2026-03-12 21:26:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 21:26:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 21:26:26] Further information can be found at the LHC@home message board.
[2026-03-12 21:26:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 21:26:26] Checking for apptainer binary...
[2026-03-12 21:26:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 21:26:26] Running /usr/bin/apptainer --version
[2026-03-12 21:26:26] apptainer version 1.4.1-1.el9
[2026-03-12 21:26:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 21:26:27] wns0043.triumf.lcg
[2026-03-12 21:26:27] apptainer works
[2026-03-12 21:26:27] Set ATHENA_PROC_NUMBER=12
[2026-03-12 21:26:27] Set ATHENA_CORE_NUMBER=12
[2026-03-12 21:26:27] Starting ATLAS job with PandaID=7043635389
[2026-03-12 21:26:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 21:32:46]  *** The last 200 lines of the pilot log: ***
[2026-03-12 21:32:46] 2026-03-13 04:32:11,060 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 21:32:46] 2026-03-13 04:32:11,061 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 21:32:46] 2026-03-13 04:32:11,061 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 21:32:46] 2026-03-13 04:32:11,061 | WARNING  | wrong length of table data, x=[1773376162.0], y=[1617.0] (must be same and length>=4)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | could have reported an average CPU frequency of 1586 MHz (4 samples)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | ..............................
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . Timing measurements:
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . get job = 0 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . initial setup = 34 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . payload setup = 50 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . stage-in = 0 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . payload execution = 82 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . stage-out = 1 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,063 | INFO     | . log creation = 0 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,063 | INFO     | ..............................
[2026-03-12 21:32:46] 2026-03-13 04:32:11,067 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 21:32:46] 2026-03-13 04:32:11,067 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043635389/pilotlog.txt
[2026-03-12 21:32:46] 2026-03-13 04:32:11,150 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-12 21:32:46] - Log from pilotlog.txt -
[2026-03-12 21:32:46] 2026-03-13 04:32:11,059 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7043635389/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,060 | INFO     | extracted standard info from prmon json
[2026-03-12 21:32:46] 2026-03-13 04:32:11,060 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 21:32:46] 2026-03-13 04:32:11,060 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 21:32:46] 2026-03-13 04:32:11,061 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 21:32:46] 2026-03-13 04:32:11,061 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 21:32:46] 2026-03-13 04:32:11,061 | WARNING  | wrong length of table data, x=[1773376162.0], y=[1617.0] (must be same and length>=4)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | could have reported an average CPU frequency of 1586 MHz (4 samples)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | ..............................
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . Timing measurements:
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . get job = 0 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . initial setup = 34 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . payload setup = 50 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . stage-in = 0 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . payload execution = 82 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . stage-out = 1 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,063 | INFO     | . log creation = 0 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,063 | INFO     | ..............................
[2026-03-12 21:32:46] 2026-03-13 04:32:11,067 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 21:32:46] 2026-03-13 04:32:11,067 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043635389/pilotlog.txt
[2026-03-12 21:32:46] 2026-03-13 04:32:11,151 | WARNING  | 
[2026-03-12 21:32:46] [begin log extracts]
[2026-03-12 21:32:46] - Log from pilotlog.txt -
[2026-03-12 21:32:46] 2026-03-13 04:32:11,059 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7043635389/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,060 | INFO     | extracted standard info from prmon json
[2026-03-12 21:32:46] 2026-03-13 04:32:11,060 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 21:32:46] 2026-03-13 04:32:11,060 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 21:32:46] 2026-03-13 04:32:11,061 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 21:32:46] 2026-03-13 04:32:11,061 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 21:32:46] 2026-03-13 04:32:11,061 | WARNING  | wrong length of table data, x=[1773376162.0], y=[1617.0] (must be same and length>=4)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | could have reported an average CPU frequency of 1586 MHz (4 samples)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | ..............................
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . Timing measurements:
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . get job = 0 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . initial setup = 34 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . payload setup = 50 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . stage-in = 0 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . payload execution = 82 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,062 | INFO     | . stage-out = 1 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,063 | INFO     | . log creation = 0 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,063 | INFO     | ..............................
[2026-03-12 21:32:46] 2026-03-13 04:32:11,067 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 21:32:46] 2026-03-13 04:32:11,067 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043635389/pilotlog.txt
[2026-03-12 21:32:46] [end log extracts]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,151 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,152 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-12 21:32:46] 2026-03-13 04:32:11,494 | INFO     | 
[2026-03-12 21:32:46] 2026-03-13 04:32:11,494 | INFO     | job summary report
[2026-03-12 21:32:46] 2026-03-13 04:32:11,494 | INFO     | --------------------------------------------------
[2026-03-12 21:32:46] 2026-03-13 04:32:11,494 | INFO     | PanDA job id: 7043635389
[2026-03-12 21:32:46] 2026-03-13 04:32:11,494 | INFO     | task id: 48955006
[2026-03-12 21:32:46] 2026-03-13 04:32:11,494 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-12 21:29:59,625 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-12 21:32:46] 2026-03-13 04:32:11,495 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 21:32:46] 2026-03-13 04:32:11,495 | INFO     | pilot state: failed 
[2026-03-12 21:32:46] 2026-03-13 04:32:11,495 | INFO     | transexitcode: 65
[2026-03-12 21:32:46] 2026-03-13 04:32:11,495 | INFO     | exeerrorcode: 65
[2026-03-12 21:32:46] 2026-03-13 04:32:11,495 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,495 | INFO     | exitcode: 65
[2026-03-12 21:32:46] 2026-03-13 04:32:11,495 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,495 | INFO     | cpuconsumptiontime: 21 s
[2026-03-12 21:32:46] 2026-03-13 04:32:11,495 | INFO     | nevents: 0
[2026-03-12 21:32:46] 2026-03-13 04:32:11,495 | INFO     | neventsw: 0
[2026-03-12 21:32:46] 2026-03-13 04:32:11,495 | INFO     | pid: 601664
[2026-03-12 21:32:46] 2026-03-13 04:32:11,496 | INFO     | pgrp: 601664
[2026-03-12 21:32:46] 2026-03-13 04:32:11,496 | INFO     | corecount: 12
[2026-03-12 21:32:46] 2026-03-13 04:32:11,496 | INFO     | event service: False
[2026-03-12 21:32:46] 2026-03-13 04:32:11,496 | INFO     | sizes: {0: 2279740, 1: 2279824, 2: 2279824, 3: 2280313, 14: 2280313, 138: 2303660, 140: 2307952, 142: 2307980, 259: 2308146}
[2026-03-12 21:32:46] 2026-03-13 04:32:11,496 | INFO     | --------------------------------------------------
[2026-03-12 21:32:46] 2026-03-13 04:32:11,496 | INFO     | 
[2026-03-12 21:32:46] 2026-03-13 04:32:11,496 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-12 21:32:46] 2026-03-13 04:32:11,675 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,676 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,676 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,676 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,677 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,677 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 21:32:46] 2026-03-13 04:32:11,677 | INFO     | job 7043635389 has completed (purged errors)
[2026-03-12 21:32:46] 2026-03-13 04:32:11,677 | INFO     | overall cleanup function is called
[2026-03-12 21:32:46] 2026-03-13 04:32:12,694 | INFO     | --- collectZombieJob: --- 10, [601664]
[2026-03-12 21:32:46] 2026-03-13 04:32:12,694 | INFO     | zombie collector waiting for pid 601664
[2026-03-12 21:32:46] 2026-03-13 04:32:12,694 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 21:32:46] 2026-03-13 04:32:12,694 | INFO     | collected zombie processes
[2026-03-12 21:32:46] 2026-03-13 04:32:12,694 | INFO     | will attempt to kill all subprocesses of pid=601664
[2026-03-12 21:32:46] 2026-03-13 04:32:13,937 | INFO     | process IDs to be killed: [601664] (in reverse order)
[2026-03-12 21:32:46] 2026-03-13 04:32:14,314 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 21:32:46] 2026-03-13 04:32:14,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 21:32:46] 2026-03-13 04:32:14,387 | INFO     | did not find any defunct processes belonging to 601664
[2026-03-12 21:32:46] 2026-03-13 04:32:14,459 | INFO     | did not find any defunct processes belonging to 601664
[2026-03-12 21:32:46] 2026-03-13 04:32:14,484 | INFO     | ready for new job
[2026-03-12 21:32:46] 2026-03-13 04:32:14,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 21:32:46] 2026-03-13 04:32:14,486 | INFO     | **************************************
[2026-03-12 21:32:46] 2026-03-13 04:32:14,486 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 21:32:46] 2026-03-13 04:32:14,486 | INFO     | **************************************
[2026-03-12 21:32:46] 2026-03-13 04:32:14,486 | INFO     | 
[2026-03-12 21:32:46] 2026-03-13 04:32:14,515 | INFO     | architecture information:
[2026-03-12 21:32:46] 2026-03-13 04:32:14,519 | INFO     | executing command: cat /etc/os-release
[2026-03-12 21:32:46] 2026-03-13 04:32:14,598 | INFO     | cat /etc/os-release:
[2026-03-12 21:32:46] NAME="CentOS Linux"
[2026-03-12 21:32:46] VERSION="7 (Core)"
[2026-03-12 21:32:46] ID="centos"
[2026-03-12 21:32:46] ID_LIKE="rhel fedora"
[2026-03-12 21:32:46] VERSION_ID="7"
[2026-03-12 21:32:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 21:32:46] ANSI_COLOR="0;31"
[2026-03-12 21:32:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 21:32:46] HOME_URL="https://www.centos.org/"
[2026-03-12 21:32:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 21:32:46] 
[2026-03-12 21:32:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 21:32:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 21:32:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 21:32:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 21:32:46] 
[2026-03-12 21:32:46] 2026-03-13 04:32:14,599 | INFO     | **************************************
[2026-03-12 21:32:46] 2026-03-13 04:32:15,102 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-12 21:32:46] 2026-03-13 04:32:15,175 | INFO     | sufficient remaining disk space (2192366895104 B)
[2026-03-12 21:32:46] 2026-03-13 04:32:15,176 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 21:32:46] 2026-03-13 04:32:15,176 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 21:32:46] 2026-03-13 04:32:15,176 | INFO     | update_server=False
[2026-03-12 21:32:46] 2026-03-13 04:32:15,176 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 21:32:46] 2026-03-13 04:32:15,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 21:32:46] 2026-03-13 04:32:15,177 | INFO     | aborting loop
[2026-03-12 21:32:46] 2026-03-13 04:32:15,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 21:32:46] 2026-03-13 04:32:15,617 | INFO     | all job control threads have been joined
[2026-03-12 21:32:46] 2026-03-13 04:32:16,005 | INFO     | all data control threads have been joined
[2026-03-12 21:32:46] 2026-03-13 04:32:16,182 | INFO     | [job] retrieve thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:16,183 | INFO     | [job] job monitor thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:16,320 | INFO     | all payload control threads have been joined
[2026-03-12 21:32:46] 2026-03-13 04:32:16,496 | INFO     | [job] validate thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:16,524 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 21:32:46] 2026-03-13 04:32:16,623 | INFO     | [job] control thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:17,011 | INFO     | [data] control thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:17,105 | INFO     | [payload] failed_post thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:17,123 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:17,123 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:17,194 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 21:32:46] 2026-03-13 04:32:17,217 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:17,238 | INFO     | [data] copytool_in thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:17,326 | INFO     | [payload] control thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:17,510 | INFO     | [data] copytool_out thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:17,530 | INFO     | [job] queue monitor thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:17,600 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:17,706 | INFO     | [payload] validate_post thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:21,203 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 21:32:46] 2026-03-13 04:32:37,499 | INFO     | [monitor] cgroup control has ended
[2026-03-12 21:32:46] 2026-03-13 04:32:38,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203155543872)>', '<ExcThread(monitor, started 140202454525696)>']
[2026-03-12 21:32:46] 2026-03-13 04:32:43,732 | INFO     | all workflow threads have been joined
[2026-03-12 21:32:46] 2026-03-13 04:32:43,732 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 21:32:46] 2026-03-13 04:32:43,732 | INFO     | traces error code: 0
[2026-03-12 21:32:46] 2026-03-13 04:32:43,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 21:32:46] 2026-03-13 04:32:44,702 | INFO     | PID=596681 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 21:32:46] 2026-03-13 04:32:44,702 | INFO     | .. there are 42 such processes running
[2026-03-12 21:32:46] 2026-03-13 04:32:44,702 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 21:32:46] 2026-03-13 04:32:44,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 21:32:46] 2026-03-13 04:32:44,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 21:32:46] 2026-03-13 04:32:44,703 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 21:32:46] 2026-03-13 04:32:44,703 | INFO     | [monitor] control thread has ended
[2026-03-12 21:32:46] 2026-03-13 04:32:45,057 [wrapper] ==== pilot stdout END ====
[2026-03-12 21:32:46] 2026-03-13 04:32:45,083 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 21:32:46] 2026-03-13 04:32:45,104 [wrapper] pilotpid: 596681
[2026-03-12 21:32:46] 2026-03-13 04:32:45,126 [wrapper] Pilot exit status: 0
[2026-03-12 21:32:46] 2026-03-13 04:32:45,311 [wrapper] pandaids: 7043635389
[2026-03-12 21:32:46] 2026-03-13 04:32:45,650 [wrapper] cleanup supervisor_pilot  596687 596682
[2026-03-12 21:32:46] 2026-03-13 04:32:45,678 [wrapper] Test setup, not cleaning
[2026-03-12 21:32:46] 2026-03-13 04:32:45,694 [wrapper] apfmon messages muted
[2026-03-12 21:32:46] 2026-03-13 04:32:45,706 [wrapper] ==== wrapper stdout END ====
[2026-03-12 21:32:46] 2026-03-13 04:32:45,724 [wrapper] ==== wrapper stderr END ====
[2026-03-12 21:32:46]  *** Error codes and diagnostics ***
[2026-03-12 21:32:46]     "exeErrorCode": 65,
[2026-03-12 21:32:46]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 21:32:46]     "pilotErrorCode": 1305,
[2026-03-12 21:32:46]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 21:32:46]  *** Listing of results directory ***
[2026-03-12 21:32:46] total 428544
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc    585013 Mar 12 15:18 pilot3.tar.gz
[2026-03-12 21:32:46] -rwx------. 1 boinc boinc     36322 Mar 12 15:20 runpilot2-wrapper.sh
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc      5111 Mar 12 15:21 queuedata.json
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc       100 Mar 12 21:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 21:32:46] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 21:26 run_atlas
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc       105 Mar 12 21:26 job.xml
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc      6594 Mar 12 21:26 init_data.xml
[2026-03-12 21:32:46] -rw-r--r--. 2 boinc boinc 434675332 Mar 12 21:26 EVNT.46701403._000969.pool.root.1
[2026-03-12 21:32:46] -rw-r--r--. 2 boinc boinc     15845 Mar 12 21:26 start_atlas.sh
[2026-03-12 21:32:46] drwxrwx--x. 2 boinc boinc      4096 Mar 12 21:26 shared
[2026-03-12 21:32:46] -rw-r--r--. 2 boinc boinc    597526 Mar 12 21:26 input.tar.gz
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc         0 Mar 12 21:26 boinc_lockfile
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc      2565 Mar 12 21:26 pandaJob.out
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc   1006514 Mar 12 21:27 agis_schedconf.cvmfs.json
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc   1511578 Mar 12 21:27 agis_ddmendpoints.agis.ALL.json
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc       445 Mar 12 21:27 workernode_map.json
[2026-03-12 21:32:46] drwx------. 5 boinc boinc      4096 Mar 12 21:27 pilot3
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc       960 Mar 12 21:30 memory_monitor_summary.json
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc     22299 Mar 12 21:30 log.48955006._048957.job.log.tgz.1
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc      7016 Mar 12 21:32 heartbeat.json
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc        95 Mar 12 21:32 pilot_heartbeat.json
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc      8192 Mar 12 21:32 boinc_mmap_file
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc        23 Mar 12 21:32 wrapper_checkpoint.txt
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc       822 Mar 12 21:32 pilotlog.txt
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc       524 Mar 12 21:32 boinc_task_state.xml
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc     92251 Mar 12 21:32 log.48955006._048957.job.log.1
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc       188 Mar 12 21:32 output.list
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc       620 Mar 12 21:32 runtime_log
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc    133120 Mar 12 21:32 result.tar.gz
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc       644 Mar 12 21:32 wkeLDm8Y3K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmewnLDmiZwbam.diag
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc      8635 Mar 12 21:32 runtime_log.err
[2026-03-12 21:32:46] -rw-r--r--. 1 boinc boinc     21795 Mar 12 21:32 stderr.txt
[2026-03-12 21:32:46] No HITS result produced
[2026-03-12 21:32:46]  *** Contents of shared directory: ***
[2026-03-12 21:32:46] total 425220
[2026-03-12 21:32:46] -rw-r--r--. 2 boinc boinc 434675332 Mar 12 21:26 ATLAS.root_0
[2026-03-12 21:32:46] -rw-r--r--. 2 boinc boinc     15845 Mar 12 21:26 start_atlas.sh
[2026-03-12 21:32:46] -rw-r--r--. 2 boinc boinc    597526 Mar 12 21:26 input.tar.gz
[2026-03-12 21:32:46] -rw-------. 1 boinc boinc    133120 Mar 12 21:32 result.tar.gz
21:32:48 (592838): run_atlas exited; CPU time 35.770712
21:32:48 (592838): called boinc_finish(0)

</stderr_txt>
]]>

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