Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:35:18 (2552924): wrapper (7.7.26015): starting
03:35:18 (2552924): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 03:35:18] Arguments: --nthreads 4
[2026-03-15 03:35:18] Threads: 4
[2026-03-15 03:35:18] Checking for CVMFS
[2026-03-15 03:35:18] No cvmfs_config command found, will try listing directly
[2026-03-15 03:35:18] CVMFS is ok
[2026-03-15 03:35:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 03:35:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 03:35:18] Further information can be found at the LHC@home message board.
[2026-03-15 03:35:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 03:35:18] Checking for apptainer binary...
[2026-03-15 03:35:18] which: no apptainer in ((null))
[2026-03-15 03:35:18] apptainer is not installed, using version from CVMFS
[2026-03-15 03:35:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 03:35:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-03-15 03:35:18] apptainer works
[2026-03-15 03:35:18] Set ATHENA_PROC_NUMBER=4
[2026-03-15 03:35:18] Set ATHENA_CORE_NUMBER=4
[2026-03-15 03:35:18] Starting ATLAS job with PandaID=7043354383
[2026-03-15 03:35:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 06:28:55]  *** The last 200 lines of the pilot log: ***
[2026-03-15 06:28:55] 2026-03-15 05:27:49,795 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 06:28:55] 2026-03-15 05:27:49,795 | INFO     | log transfer has been attempted: DONE
[2026-03-15 06:28:55] 2026-03-15 05:27:49,795 | INFO     | job 7043354383 has finished - writing final server update
[2026-03-15 06:28:55] 2026-03-15 05:27:49,796 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_850327/.job.ad'
[2026-03-15 06:28:55] 2026-03-15 05:27:49,796 | INFO     | total number of processed events: 400 (read)
[2026-03-15 06:28:55] 2026-03-15 05:27:49,807 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7043354383/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 06:28:55] 2026-03-15 05:27:49,808 | INFO     | extracted standard info from prmon json
[2026-03-15 06:28:55] 2026-03-15 05:27:49,808 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 06:28:55] 2026-03-15 05:27:49,808 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 06:28:55] 2026-03-15 05:27:49,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 06:28:55] 2026-03-15 05:27:49,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 06:28:55] 2026-03-15 05:27:49,812 | INFO     | fitting pss+swap vs Time
[2026-03-15 06:28:55] 2026-03-15 05:27:49,812 | INFO     | sum of square deviations: 1496660620.0
[2026-03-15 06:28:55] 2026-03-15 05:27:49,813 | INFO     | sum of deviations: 15643274929.999996
[2026-03-15 06:28:55] 2026-03-15 05:27:49,813 | INFO     | mean x: 1773547279.0
[2026-03-15 06:28:55] 2026-03-15 05:27:49,813 | INFO     | mean y: 2321436.8579881657
[2026-03-15 06:28:55] 2026-03-15 05:27:49,813 | INFO     | intersect: -18535005807.544563
[2026-03-15 06:28:55] 2026-03-15 05:27:49,814 | INFO     | chi2: 1.3836251055775008
[2026-03-15 06:28:55] 2026-03-15 05:27:49,814 | INFO     | sum of square deviations: 1367709365.0
[2026-03-15 06:28:55] 2026-03-15 05:27:49,815 | INFO     | sum of deviations: 15164355969.500002
[2026-03-15 06:28:55] 2026-03-15 05:27:49,815 | INFO     | mean x: 1773547126.5
[2026-03-15 06:28:55] 2026-03-15 05:27:49,815 | INFO     | mean y: 2320870.323170732
[2026-03-15 06:28:55] 2026-03-15 05:27:49,815 | INFO     | intersect: -19661725193.24228
[2026-03-15 06:28:55] 2026-03-15 05:27:49,815 | INFO     | chi2: 1.3848600441221195
[2026-03-15 06:28:55] 2026-03-15 05:27:49,815 | INFO     | current chi2=1.3848600441221195 (change=-0.08925384048327202 %)
[2026-03-15 06:28:55] 2026-03-15 05:27:49,816 | INFO     | right removable region: 163
[2026-03-15 06:28:55] 2026-03-15 05:27:49,816 | INFO     | sum of square deviations: 1367709365.0
[2026-03-15 06:28:55] 2026-03-15 05:27:49,817 | INFO     | sum of deviations: -6976390904.000001
[2026-03-15 06:28:55] 2026-03-15 05:27:49,817 | INFO     | mean x: 1773547431.5
[2026-03-15 06:28:55] 2026-03-15 05:27:49,817 | INFO     | mean y: 2347806.6585365855
[2026-03-15 06:28:55] 2026-03-15 05:27:49,817 | INFO     | intersect: 9048831281.551731
[2026-03-15 06:28:55] 2026-03-15 05:27:49,817 | INFO     | chi2: 0.015197585969437329
[2026-03-15 06:28:55] 2026-03-15 05:27:49,817 | INFO     | current chi2=0.015197585969437329 (change=98.9016109993831 %)
[2026-03-15 06:28:55] 2026-03-15 05:27:49,818 | INFO     | sum of square deviations: 1246386160.0
[2026-03-15 06:28:55] 2026-03-15 05:27:49,818 | INFO     | sum of deviations: -5920510245.0
[2026-03-15 06:28:55] 2026-03-15 05:27:49,819 | INFO     | mean x: 1773547584.0
[2026-03-15 06:28:55] 2026-03-15 05:27:49,819 | INFO     | mean y: 2346472.132075472
[2026-03-15 06:28:55] 2026-03-15 05:27:49,819 | INFO     | intersect: 8426947914.326361
[2026-03-15 06:28:55] 2026-03-15 05:27:49,819 | INFO     | chi2: 0.014718568458427422
[2026-03-15 06:28:55] 2026-03-15 05:27:49,819 | INFO     | current chi2=0.014718568458427422 (change=3.151931576325482 %)
[2026-03-15 06:28:55] 2026-03-15 05:27:49,819 | INFO     | left removable region: 20
[2026-03-15 06:28:55] 2026-03-15 05:27:49,819 | INFO     | sum of square deviations: 906703512.0
[2026-03-15 06:28:55] 2026-03-15 05:27:49,820 | INFO     | sum of deviations: -2495325901.999999
[2026-03-15 06:28:55] 2026-03-15 05:27:49,820 | INFO     | mean x: 1773547706.0
[2026-03-15 06:28:55] 2026-03-15 05:27:49,820 | INFO     | mean y: 2341869.5664335666
[2026-03-15 06:28:55] 2026-03-15 05:27:49,820 | INFO     | intersect: 4883297408.662745
[2026-03-15 06:28:55] 2026-03-15 05:27:49,821 | INFO     | chi2: 0.009251734332004746
[2026-03-15 06:28:55] 2026-03-15 05:27:49,821 | INFO     | current memory leak: -2.75 B/s (using 143 data points, chi2=0.01)
[2026-03-15 06:28:55] 2026-03-15 05:27:49,821 | INFO     | could have reported an average CPU frequency of 2553 MHz (9 samples)
[2026-03-15 06:28:55] 2026-03-15 05:27:49,821 | INFO     | ..............................
[2026-03-15 06:28:55] 2026-03-15 05:27:49,822 | INFO     | . Timing measurements:
[2026-03-15 06:28:55] 2026-03-15 05:27:49,822 | INFO     | . get job = 0 s
[2026-03-15 06:28:55] 2026-03-15 05:27:49,822 | INFO     | . initial setup = 5 s
[2026-03-15 06:28:55] 2026-03-15 05:27:49,822 | INFO     | . payload setup = 6 s
[2026-03-15 06:28:55] 2026-03-15 05:27:49,822 | INFO     | . stage-in = 0 s
[2026-03-15 06:28:55] 2026-03-15 05:27:49,822 | INFO     | . payload execution = 10312 s
[2026-03-15 06:28:55] 2026-03-15 05:27:49,822 | INFO     | . stage-out = 0 s
[2026-03-15 06:28:55] 2026-03-15 05:27:49,822 | INFO     | . log creation = 0 s
[2026-03-15 06:28:55] 2026-03-15 05:27:49,822 | INFO     | ..............................
[2026-03-15 06:28:55] 2026-03-15 05:27:50,034 | INFO     | 
[2026-03-15 06:28:55] 2026-03-15 05:27:50,034 | INFO     | job summary report
[2026-03-15 06:28:55] 2026-03-15 05:27:50,034 | INFO     | --------------------------------------------------
[2026-03-15 06:28:55] 2026-03-15 05:27:50,034 | INFO     | PanDA job id: 7043354383
[2026-03-15 06:28:55] 2026-03-15 05:27:50,034 | INFO     | task id: 48955015
[2026-03-15 06:28:55] 2026-03-15 05:27:50,034 | INFO     | errors: (none)
[2026-03-15 06:28:55] 2026-03-15 05:27:50,034 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 06:28:55] 2026-03-15 05:27:50,034 | INFO     | pilot state: finished 
[2026-03-15 06:28:55] 2026-03-15 05:27:50,034 | INFO     | transexitcode: 0
[2026-03-15 06:28:55] 2026-03-15 05:27:50,034 | INFO     | exeerrorcode: 0
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | exeerrordiag: 
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | exitcode: 0
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | exitmsg: OK
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | cpuconsumptiontime: 39268 s
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | nevents: 400
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | neventsw: 0
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | pid: 2561512
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | pgrp: 2561512
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | corecount: 4
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | event service: False
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | sizes: {0: 2279814, 1: 2280275, 11: 2280275, 10322: 2309038, 10323: 2309037, 10324: 2318113, 10325: 2318297, 10326: 2318555}
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | --------------------------------------------------
[2026-03-15 06:28:55] 2026-03-15 05:27:50,035 | INFO     | 
[2026-03-15 06:28:55] 2026-03-15 05:27:50,036 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-03-15 06:28:55] 2026-03-15 05:27:50,059 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,059 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,059 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,059 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,060 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,060 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,060 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,060 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,060 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,060 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,060 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,060 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,061 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 06:28:55] 2026-03-15 05:27:50,061 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,061 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 06:28:55] 2026-03-15 05:27:50,061 | INFO     | job 7043354383 has completed (purged errors)
[2026-03-15 06:28:55] 2026-03-15 05:27:50,061 | INFO     | overall cleanup function is called
[2026-03-15 06:28:55] 2026-03-15 05:27:51,069 | INFO     | --- collectZombieJob: --- 10, [2561512]
[2026-03-15 06:28:55] 2026-03-15 05:27:51,069 | INFO     | zombie collector waiting for pid 2561512
[2026-03-15 06:28:55] 2026-03-15 05:27:51,069 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 06:28:55] 2026-03-15 05:27:51,069 | INFO     | collected zombie processes
[2026-03-15 06:28:55] 2026-03-15 05:27:51,069 | INFO     | will attempt to kill all subprocesses of pid=2561512
[2026-03-15 06:28:55] 2026-03-15 05:27:51,154 | WARNING  | process 2561512 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 06:28:55] 2026-03-15 05:27:51,842 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 06:28:55] 2026-03-15 05:27:51,941 | INFO     | process IDs to be killed: [2561512] (in reverse order)
[2026-03-15 06:28:55] 2026-03-15 05:27:52,074 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 06:28:55] 2026-03-15 05:27:52,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 06:28:55] 2026-03-15 05:27:52,101 | INFO     | did not find any defunct processes belonging to 2561512
[2026-03-15 06:28:55] 2026-03-15 05:27:52,127 | INFO     | did not find any defunct processes belonging to 2561512
[2026-03-15 06:28:55] 2026-03-15 05:27:52,127 | INFO     | ready for new job
[2026-03-15 06:28:55] 2026-03-15 05:27:52,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 06:28:55] 2026-03-15 05:27:52,129 | INFO     | **************************************
[2026-03-15 06:28:55] 2026-03-15 05:27:52,129 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 06:28:55] 2026-03-15 05:27:52,129 | INFO     | **************************************
[2026-03-15 06:28:55] 2026-03-15 05:27:52,129 | INFO     | 
[2026-03-15 06:28:55] 2026-03-15 05:27:52,134 | INFO     | architecture information:
[2026-03-15 06:28:55] 2026-03-15 05:27:52,134 | INFO     | executing command: cat /etc/os-release
[2026-03-15 06:28:55] 2026-03-15 05:27:52,152 | INFO     | cat /etc/os-release:
[2026-03-15 06:28:55] NAME="CentOS Linux"
[2026-03-15 06:28:55] VERSION="7 (Core)"
[2026-03-15 06:28:55] ID="centos"
[2026-03-15 06:28:55] ID_LIKE="rhel fedora"
[2026-03-15 06:28:55] VERSION_ID="7"
[2026-03-15 06:28:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 06:28:55] ANSI_COLOR="0;31"
[2026-03-15 06:28:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 06:28:55] HOME_URL="https://www.centos.org/"
[2026-03-15 06:28:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 06:28:55] 
[2026-03-15 06:28:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 06:28:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 06:28:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 06:28:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 06:28:55] 
[2026-03-15 06:28:55] 2026-03-15 05:27:52,153 | INFO     | **************************************
[2026-03-15 06:28:55] 2026-03-15 05:27:52,332 | INFO     | number of running child processes to parent process 2561512: 1
[2026-03-15 06:28:55] 2026-03-15 05:27:52,333 | INFO     | maximum number of monitored processes: 6
[2026-03-15 06:28:55] 2026-03-15 05:27:52,333 | INFO     | aborting job monitoring since job object (job id=7043354383) has expired
[2026-03-15 06:28:55] 2026-03-15 05:27:52,656 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-03-15 06:28:55] 2026-03-15 05:27:52,674 | INFO     | sufficient remaining disk space (23015194624 B)
[2026-03-15 06:28:55] 2026-03-15 05:27:52,674 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 06:28:55] 2026-03-15 05:27:52,675 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 06:28:55] 2026-03-15 05:27:52,675 | INFO     | update_server=False
[2026-03-15 06:28:55] 2026-03-15 05:27:52,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 06:28:55] 2026-03-15 05:27:52,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:28:55] 2026-03-15 05:27:52,675 | INFO     | will abort loop
[2026-03-15 06:28:55] 2026-03-15 05:27:53,208 | INFO     | all job control threads have been joined
[2026-03-15 06:28:55] 2026-03-15 05:27:53,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 06:28:55] 2026-03-15 05:27:53,365 | INFO     | all data control threads have been joined
[2026-03-15 06:28:55] 2026-03-15 05:27:53,618 | INFO     | all payload control threads have been joined
[2026-03-15 06:28:55] 2026-03-15 05:27:53,680 | INFO     | [job] retrieve thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:53,680 | INFO     | [job] job monitor thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:53,911 | INFO     | [job] validate thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:53,997 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:54,180 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:54,213 | INFO     | [job] control thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:54,367 | INFO     | [data] control thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:54,401 | INFO     | [payload] validate_post thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:54,623 | INFO     | [payload] control thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:54,834 | INFO     | [payload] failed_post thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:54,875 | INFO     | [data] copytool_in thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:54,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:28:55] 2026-03-15 05:27:55,122 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:55,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 06:28:55] 2026-03-15 05:27:55,364 | INFO     | [data] copytool_out thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:55,925 | INFO     | [job] queue monitor thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:27:59,153 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:28:03,560 | INFO     | job.realtimelogging is not enabled
[2026-03-15 06:28:55] 2026-03-15 05:28:04,565 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 06:28:55] 2026-03-15 05:28:22,801 | INFO     | PID=2556708 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 06:28:55] 2026-03-15 05:28:22,801 | INFO     | .. there are 12 such processes running
[2026-03-15 06:28:55] 2026-03-15 05:28:22,802 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 06:28:55] 2026-03-15 05:28:22,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 06:28:55] 2026-03-15 05:28:22,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 06:28:55] 2026-03-15 05:28:49,974 | INFO     | [monitor] cgroup control has ended
[2026-03-15 06:28:55] 2026-03-15 05:28:50,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23451960670016)>', '<ExcThread(monitor, started 23451651778304)>']
[2026-03-15 06:28:55] 2026-03-15 05:28:50,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 06:28:55] 2026-03-15 05:28:50,924 | INFO     | [monitor] control thread has ended
[2026-03-15 06:28:55] 2026-03-15 05:28:55,463 | INFO     | all workflow threads have been joined
[2026-03-15 06:28:55] 2026-03-15 05:28:55,464 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 06:28:55] 2026-03-15 05:28:55,464 | INFO     | traces error code: 0
[2026-03-15 06:28:55] 2026-03-15 05:28:55,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 06:28:55] 2026-03-15 05:28:55,641 [wrapper] ==== pilot stdout END ====
[2026-03-15 06:28:55] 2026-03-15 05:28:55,644 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 06:28:55] 2026-03-15 05:28:55,646 [wrapper] pilotpid: 2556708
[2026-03-15 06:28:55] 2026-03-15 05:28:55,648 [wrapper] Pilot exit status: 0
[2026-03-15 06:28:55] 2026-03-15 05:28:55,656 [wrapper] pandaids: 7043354383
[2026-03-15 06:28:55] 2026-03-15 05:28:55,727 [wrapper] cleanup supervisor_pilot 2757439 2556709
[2026-03-15 06:28:55] 2026-03-15 05:28:55,730 [wrapper] Test setup, not cleaning
[2026-03-15 06:28:55] 2026-03-15 05:28:55,732 [wrapper] apfmon messages muted
[2026-03-15 06:28:55] 2026-03-15 05:28:55,735 [wrapper] ==== wrapper stdout END ====
[2026-03-15 06:28:55] 2026-03-15 05:28:55,737 [wrapper] ==== wrapper stderr END ====
[2026-03-15 06:28:55]  *** Error codes and diagnostics ***
[2026-03-15 06:28:55]     "exeErrorCode": 0,
[2026-03-15 06:28:55]     "exeErrorDiag": "",
[2026-03-15 06:28:55]     "pilotErrorCode": 0,
[2026-03-15 06:28:55]     "pilotErrorDiag": "",
[2026-03-15 06:28:55]  *** Listing of results directory ***
[2026-03-15 06:28:55] total 615572
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc      5111 Mar 12 18:04 queuedata.json
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc    585013 Mar 12 18:04 pilot3.tar.gz
[2026-03-15 06:28:55] -rwx------. 1 boinc boinc     36322 Mar 12 18:04 runpilot2-wrapper.sh
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc       100 Mar 15 03:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 06:28:55] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 03:35 run_atlas
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc       105 Mar 15 03:35 job.xml
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc      6563 Mar 15 03:35 init_data.xml
[2026-03-15 06:28:55] -rw-r--r--. 2 boinc boinc 439834519 Mar 15 03:35 EVNT.46701403._002339.pool.root.1
[2026-03-15 06:28:55] -rw-r--r--. 2 boinc boinc     15845 Mar 15 03:35 start_atlas.sh
[2026-03-15 06:28:55] drwxrwx--x. 2 boinc boinc      4096 Mar 15 03:35 shared
[2026-03-15 06:28:55] -rw-r--r--. 2 boinc boinc    597534 Mar 15 03:35 input.tar.gz
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc         0 Mar 15 03:35 boinc_lockfile
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc      2571 Mar 15 03:35 pandaJob.out
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc   1006481 Mar 15 03:35 agis_schedconf.cvmfs.json
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc   1511579 Mar 15 03:35 agis_ddmendpoints.agis.ALL.json
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc       451 Mar 15 03:35 workernode_map.json
[2026-03-15 06:28:55] drwx------. 5 boinc boinc      4096 Mar 15 03:35 pilot3
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc 182962087 Mar 15 06:27 HITS.48955015._014182.pool.root.1
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc       530 Mar 15 06:27 boinc_task_state.xml
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc      1035 Mar 15 06:27 memory_monitor_summary.json
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc    343316 Mar 15 06:27 log.48955015._014182.job.log.tgz.1
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc      6403 Mar 15 06:27 heartbeat.json
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc        95 Mar 15 06:28 pilot_heartbeat.json
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc      8192 Mar 15 06:28 boinc_mmap_file
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc        27 Mar 15 06:28 wrapper_checkpoint.txt
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc      5191 Mar 15 06:28 pilotlog.txt
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc   1462956 Mar 15 06:28 log.48955015._014182.job.log.1
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc       357 Mar 15 06:28 output.list
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc       620 Mar 15 06:28 runtime_log
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc   1822720 Mar 15 06:28 result.tar.gz
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc      9205 Mar 15 06:28 runtime_log.err
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc       665 Mar 15 06:28 jLkKDmjdyK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYJnLDm8cOnEo.diag
[2026-03-15 06:28:55] -rw-r--r--. 1 boinc boinc     21143 Mar 15 06:28 stderr.txt
[2026-03-15 06:28:55] HITS file was successfully produced:
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc 182962087 Mar 15 06:27 shared/HITS.pool.root.1
[2026-03-15 06:28:55]  *** Contents of shared directory: ***
[2026-03-15 06:28:55] total 610592
[2026-03-15 06:28:55] -rw-r--r--. 2 boinc boinc 439834519 Mar 15 03:35 ATLAS.root_0
[2026-03-15 06:28:55] -rw-r--r--. 2 boinc boinc     15845 Mar 15 03:35 start_atlas.sh
[2026-03-15 06:28:55] -rw-r--r--. 2 boinc boinc    597534 Mar 15 03:35 input.tar.gz
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc 182962087 Mar 15 06:27 HITS.pool.root.1
[2026-03-15 06:28:55] -rw-------. 1 boinc boinc   1822720 Mar 15 06:28 result.tar.gz
06:28:57 (2552924): run_atlas exited; CPU time 39673.897630
06:28:57 (2552924): called boinc_finish(0)

</stderr_txt>
]]>

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