Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:43:15 (28336): wrapper (7.7.26015): starting
07:43:15 (28336): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 07:43:15] Arguments: --nthreads 8
[2026-03-13 07:43:15] Threads: 8
[2026-03-13 07:43:15] Checking for CVMFS
[2026-03-13 07:43:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 07:43:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 07:43:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 07:43:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 07:43:19] 2.11.2.0 9196 125790 136232 157230 1 53 21424269 25165824 4842 130560 159 43164926 99.809 33911281 1021 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 07:43:19] CVMFS is ok
[2026-03-13 07:43:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 07:43:19] Checking for apptainer binary...
[2026-03-13 07:43:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 07:43:19] Running /usr/bin/apptainer --version
[2026-03-13 07:43:19] apptainer version 1.3.2-1.el7
[2026-03-13 07:43:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 07:43:33] cg-vwn422.simple-grid.lan
[2026-03-13 07:43:33] apptainer works
[2026-03-13 07:43:33] Set ATHENA_PROC_NUMBER=8
[2026-03-13 07:43:33] Set ATHENA_CORE_NUMBER=8
[2026-03-13 07:43:33] Starting ATLAS job with PandaID=7051939402
[2026-03-13 07:43:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 12:42:32]  *** The last 200 lines of the pilot log: ***
[2026-03-13 12:42:32] 2026-03-13 11:41:55,306 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7051939402/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 12:42:32] 2026-03-13 11:41:55,307 | INFO     | extracted standard info from prmon json
[2026-03-13 12:42:32] 2026-03-13 11:41:55,307 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 12:42:32] 2026-03-13 11:41:55,307 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 12:42:32] 2026-03-13 11:41:55,307 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 12:42:32] 2026-03-13 11:41:55,308 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 12:42:32] 2026-03-13 11:41:55,316 | INFO     | fitting pss+swap vs Time
[2026-03-13 12:42:32] 2026-03-13 11:41:55,317 | INFO     | sum of square deviations: 7102775035.0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,320 | INFO     | sum of deviations: 114252464755.5
[2026-03-13 12:42:32] 2026-03-13 11:41:55,320 | INFO     | mean x: 1773393414.5
[2026-03-13 12:42:32] 2026-03-13 11:41:55,320 | INFO     | mean y: 2434590.4683098593
[2026-03-13 12:42:32] 2026-03-13 11:41:55,320 | INFO     | intersect: -28523679159.352436
[2026-03-13 12:42:32] 2026-03-13 11:41:55,321 | INFO     | chi2: 5.421707563768878
[2026-03-13 12:42:32] 2026-03-13 11:41:55,321 | INFO     | sum of square deviations: 6734191380.0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,326 | INFO     | sum of deviations: 131249983392.00003
[2026-03-13 12:42:32] 2026-03-13 11:41:55,326 | INFO     | mean x: 1773393262.0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,326 | INFO     | mean y: 2441508.168458781
[2026-03-13 12:42:32] 2026-03-13 11:41:55,327 | INFO     | intersect: -34561149434.057594
[2026-03-13 12:42:32] 2026-03-13 11:41:55,327 | INFO     | chi2: 4.624517487845787
[2026-03-13 12:42:32] 2026-03-13 11:41:55,327 | INFO     | current chi2=4.624517487845787 (change=14.703671611696592 %)
[2026-03-13 12:42:32] 2026-03-13 11:41:55,327 | INFO     | right removable region: 278
[2026-03-13 12:42:32] 2026-03-13 11:41:55,328 | INFO     | sum of square deviations: 6734191380.0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,334 | INFO     | sum of deviations: 21596215275.999924
[2026-03-13 12:42:32] 2026-03-13 11:41:55,334 | INFO     | mean x: 1773393567.0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,334 | INFO     | mean y: 2472884.663082437
[2026-03-13 12:42:32] 2026-03-13 11:41:55,334 | INFO     | intersect: -5684711675.572181
[2026-03-13 12:42:32] 2026-03-13 11:41:55,335 | INFO     | chi2: 1.3067345719580403
[2026-03-13 12:42:32] 2026-03-13 11:41:55,335 | INFO     | current chi2=1.3067345719580403 (change=75.89809932408694 %)
[2026-03-13 12:42:32] 2026-03-13 11:41:55,336 | INFO     | sum of square deviations: 6378584712.5
[2026-03-13 12:42:32] 2026-03-13 11:41:55,338 | INFO     | sum of deviations: -1617670803.5
[2026-03-13 12:42:32] 2026-03-13 11:41:55,339 | INFO     | mean x: 1773393719.5
[2026-03-13 12:42:32] 2026-03-13 11:41:55,339 | INFO     | mean y: 2482757.0036496352
[2026-03-13 12:42:32] 2026-03-13 11:41:55,339 | INFO     | intersect: 452232563.9668693
[2026-03-13 12:42:32] 2026-03-13 11:41:55,340 | INFO     | chi2: 0.8586679293050566
[2026-03-13 12:42:32] 2026-03-13 11:41:55,340 | INFO     | current chi2=0.8586679293050566 (change=34.28903254481058 %)
[2026-03-13 12:42:32] 2026-03-13 11:41:55,340 | INFO     | sum of square deviations: 6035722470.0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,343 | INFO     | sum of deviations: -2407298205.0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,343 | INFO     | mean x: 1773393872.0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,343 | INFO     | mean y: 2483116.4646840147
[2026-03-13 12:42:32] 2026-03-13 11:41:55,343 | INFO     | intersect: 709786659.0054
[2026-03-13 12:42:32] 2026-03-13 11:41:55,344 | INFO     | chi2: 0.8481684473361106
[2026-03-13 12:42:32] 2026-03-13 11:41:55,344 | INFO     | current chi2=0.8481684473361106 (change=1.2227639592226913 %)
[2026-03-13 12:42:32] 2026-03-13 11:41:55,344 | INFO     | left removable region: 30
[2026-03-13 12:42:32] 2026-03-13 11:41:55,344 | INFO     | sum of square deviations: 4729621702.0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,347 | INFO     | sum of deviations: 10428767857.5
[2026-03-13 12:42:32] 2026-03-13 11:41:55,347 | INFO     | mean x: 1773394146.5
[2026-03-13 12:42:32] 2026-03-13 11:41:55,347 | INFO     | mean y: 2493859.8024193547
[2026-03-13 12:42:32] 2026-03-13 11:41:55,347 | INFO     | intersect: -3907822237.122883
[2026-03-13 12:42:32] 2026-03-13 11:41:55,347 | INFO     | chi2: 0.0003886568499665429
[2026-03-13 12:42:32] 2026-03-13 11:41:55,348 | INFO     | current memory leak: 2.20 B/s (using 248 data points, chi2=0.00)
[2026-03-13 12:42:32] 2026-03-13 11:41:55,348 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-13 12:42:32] 2026-03-13 11:41:55,349 | INFO     | ..............................
[2026-03-13 12:42:32] 2026-03-13 11:41:55,349 | INFO     | . Timing measurements:
[2026-03-13 12:42:32] 2026-03-13 11:41:55,349 | INFO     | . get job = 0 s
[2026-03-13 12:42:32] 2026-03-13 11:41:55,349 | INFO     | . initial setup = 97 s
[2026-03-13 12:42:32] 2026-03-13 11:41:55,349 | INFO     | . payload setup = 119 s
[2026-03-13 12:42:32] 2026-03-13 11:41:55,349 | INFO     | . stage-in = 0 s
[2026-03-13 12:42:32] 2026-03-13 11:41:55,349 | INFO     | . payload execution = 17444 s
[2026-03-13 12:42:32] 2026-03-13 11:41:55,349 | INFO     | . stage-out = 3 s
[2026-03-13 12:42:32] 2026-03-13 11:41:55,349 | INFO     | . log creation = 1 s
[2026-03-13 12:42:32] 2026-03-13 11:41:55,350 | INFO     | ..............................
[2026-03-13 12:42:32] 2026-03-13 11:41:55,510 | INFO     | 
[2026-03-13 12:42:32] 2026-03-13 11:41:55,510 | INFO     | job summary report
[2026-03-13 12:42:32] 2026-03-13 11:41:55,510 | INFO     | --------------------------------------------------
[2026-03-13 12:42:32] 2026-03-13 11:41:55,510 | INFO     | PanDA job id: 7051939402
[2026-03-13 12:42:32] 2026-03-13 11:41:55,510 | INFO     | task id: 48967085
[2026-03-13 12:42:32] 2026-03-13 11:41:55,510 | INFO     | errors: (none)
[2026-03-13 12:42:32] 2026-03-13 11:41:55,511 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 12:42:32] 2026-03-13 11:41:55,511 | INFO     | pilot state: finished 
[2026-03-13 12:42:32] 2026-03-13 11:41:55,511 | INFO     | transexitcode: 0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,511 | INFO     | exeerrorcode: 0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,511 | INFO     | exeerrordiag: 
[2026-03-13 12:42:32] 2026-03-13 11:41:55,511 | INFO     | exitcode: 0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,511 | INFO     | exitmsg: OK
[2026-03-13 12:42:32] 2026-03-13 11:41:55,511 | INFO     | cpuconsumptiontime: 67680 s
[2026-03-13 12:42:32] 2026-03-13 11:41:55,511 | INFO     | nevents: 400
[2026-03-13 12:42:32] 2026-03-13 11:41:55,511 | INFO     | neventsw: 0
[2026-03-13 12:42:32] 2026-03-13 11:41:55,512 | INFO     | pid: 4564
[2026-03-13 12:42:32] 2026-03-13 11:41:55,512 | INFO     | pgrp: 4564
[2026-03-13 12:42:32] 2026-03-13 11:41:55,512 | INFO     | corecount: 8
[2026-03-13 12:42:32] 2026-03-13 11:41:55,512 | INFO     | event service: False
[2026-03-13 12:42:32] 2026-03-13 11:41:55,512 | INFO     | sizes: {0: 2279753, 1: 2255990, 2: 2280298, 13: 2280298, 17567: 2312447, 17568: 2312446, 17571: 2321628, 17574: 2321878}
[2026-03-13 12:42:32] 2026-03-13 11:41:55,512 | INFO     | --------------------------------------------------
[2026-03-13 12:42:32] 2026-03-13 11:41:55,512 | INFO     | 
[2026-03-13 12:42:32] 2026-03-13 11:41:55,512 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-13 12:42:32] 2026-03-13 11:41:55,870 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,871 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,871 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,871 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,872 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,872 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,872 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,872 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 12:42:32] 2026-03-13 11:41:55,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,873 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 12:42:32] 2026-03-13 11:41:55,873 | INFO     | job 7051939402 has completed (purged errors)
[2026-03-13 12:42:32] 2026-03-13 11:41:55,873 | INFO     | overall cleanup function is called
[2026-03-13 12:42:32] 2026-03-13 11:41:56,882 | INFO     | --- collectZombieJob: --- 10, [4564]
[2026-03-13 12:42:32] 2026-03-13 11:41:56,882 | INFO     | zombie collector waiting for pid 4564
[2026-03-13 12:42:32] 2026-03-13 11:41:56,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 12:42:32] 2026-03-13 11:41:56,882 | INFO     | collected zombie processes
[2026-03-13 12:42:32] 2026-03-13 11:41:56,882 | INFO     | will attempt to kill all subprocesses of pid=4564
[2026-03-13 12:42:32] 2026-03-13 11:41:56,993 | INFO     | process IDs to be killed: [4564] (in reverse order)
[2026-03-13 12:42:32] 2026-03-13 11:41:57,417 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 12:42:32] 2026-03-13 11:41:57,418 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 12:42:32] 2026-03-13 11:41:57,433 | INFO     | did not find any defunct processes belonging to 4564
[2026-03-13 12:42:32] 2026-03-13 11:41:57,443 | INFO     | did not find any defunct processes belonging to 4564
[2026-03-13 12:42:32] 2026-03-13 11:41:57,443 | INFO     | ready for new job
[2026-03-13 12:42:32] 2026-03-13 11:41:57,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 12:42:32] 2026-03-13 11:41:57,445 | INFO     | **************************************
[2026-03-13 12:42:32] 2026-03-13 11:41:57,446 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 12:42:32] 2026-03-13 11:41:57,446 | INFO     | **************************************
[2026-03-13 12:42:32] 2026-03-13 11:41:57,446 | INFO     | 
[2026-03-13 12:42:32] 2026-03-13 11:41:57,446 | INFO     | pilot is running in a VM
[2026-03-13 12:42:32] 2026-03-13 11:41:57,447 | INFO     | architecture information:
[2026-03-13 12:42:32] 2026-03-13 11:41:57,454 | INFO     | executing command: cat /etc/os-release
[2026-03-13 12:42:32] 2026-03-13 11:41:57,581 | INFO     | cat /etc/os-release:
[2026-03-13 12:42:32] NAME="CentOS Linux"
[2026-03-13 12:42:32] VERSION="7 (Core)"
[2026-03-13 12:42:32] ID="centos"
[2026-03-13 12:42:32] ID_LIKE="rhel fedora"
[2026-03-13 12:42:32] VERSION_ID="7"
[2026-03-13 12:42:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 12:42:32] ANSI_COLOR="0;31"
[2026-03-13 12:42:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 12:42:32] HOME_URL="https://www.centos.org/"
[2026-03-13 12:42:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 12:42:32] 
[2026-03-13 12:42:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 12:42:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 12:42:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 12:42:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 12:42:32] 
[2026-03-13 12:42:32] 2026-03-13 11:41:57,582 | INFO     | **************************************
[2026-03-13 12:42:32] 2026-03-13 11:41:58,085 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-13 12:42:32] 2026-03-13 11:41:58,263 | INFO     | sufficient remaining disk space (494553530368 B)
[2026-03-13 12:42:32] 2026-03-13 11:41:58,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 12:42:32] 2026-03-13 11:41:58,263 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 12:42:32] 2026-03-13 11:41:58,263 | INFO     | update_server=False
[2026-03-13 12:42:32] 2026-03-13 11:41:58,264 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 12:42:32] 2026-03-13 11:41:58,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 12:42:32] 2026-03-13 11:41:58,435 | INFO     | all data control threads have been joined
[2026-03-13 12:42:32] 2026-03-13 11:41:58,487 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 12:42:32] 2026-03-13 11:41:58,487 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 12:42:32] 2026-03-13 11:41:58,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 12:42:32] 2026-03-13 11:41:58,487 | INFO     | will abort loop
[2026-03-13 12:42:32] 2026-03-13 11:41:59,269 | INFO     | [job] retrieve thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:41:59,441 | INFO     | [data] control thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:41:59,493 | INFO     | [job] job monitor thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:41:59,599 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:41:59,653 | INFO     | all job control threads have been joined
[2026-03-13 12:42:32] 2026-03-13 11:41:59,680 | INFO     | all payload control threads have been joined
[2026-03-13 12:42:32] 2026-03-13 11:41:59,767 | INFO     | [payload] validate_post thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:42:00,045 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:42:00,376 | INFO     | [data] copytool_out thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:42:00,457 | INFO     | [job] validate thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:42:00,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 12:42:32] 2026-03-13 11:42:00,521 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:42:00,629 | INFO     | [data] copytool_in thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:42:00,659 | INFO     | [job] control thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:42:00,672 | INFO     | [payload] failed_post thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:42:00,676 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:42:00,686 | INFO     | [payload] control thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:42:01,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 12:42:32] 2026-03-13 11:42:01,522 | INFO     | [job] queue monitor thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:42:05,103 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 12:42:32] 2026-03-13 11:42:18,084 | INFO     | [monitor] cgroup control has ended
[2026-03-13 12:42:32] 2026-03-13 11:42:19,504 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140499704710976)>', '<ExcThread(monitor, started 140499033773824)>']
[2026-03-13 12:42:32] 2026-03-13 11:42:24,530 | INFO     | all workflow threads have been joined
[2026-03-13 12:42:32] 2026-03-13 11:42:24,530 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 12:42:32] 2026-03-13 11:42:24,530 | INFO     | traces error code: 0
[2026-03-13 12:42:32] 2026-03-13 11:42:24,531 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 12:42:32] 2026-03-13 11:42:27,678 | INFO     | PID=32428 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 12:42:32] 2026-03-13 11:42:27,679 | INFO     | .. there are 9 such processes running
[2026-03-13 12:42:32] 2026-03-13 11:42:27,680 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 12:42:32] 2026-03-13 11:42:27,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 12:42:32] 2026-03-13 11:42:27,680 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 12:42:32] 2026-03-13 11:42:27,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 12:42:32] 2026-03-13 11:42:27,680 | CRITICAL | thread 'MainThread' is not alive
[2026-03-13 12:42:32] 2026-03-13 11:42:27,681 | INFO     | [monitor] control thread has ended
[2026-03-13 12:42:32] 2026-03-13 11:42:28,043 [wrapper] ==== pilot stdout END ====
[2026-03-13 12:42:32] 2026-03-13 11:42:28,125 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 12:42:32] 2026-03-13 11:42:28,195 [wrapper] pilotpid: 32428
[2026-03-13 12:42:32] 2026-03-13 11:42:28,260 [wrapper] Pilot exit status: 0
[2026-03-13 12:42:32] 2026-03-13 11:42:28,621 [wrapper] pandaids: 7051939402
[2026-03-13 12:42:32] 2026-03-13 11:42:29,512 [wrapper] cleanup supervisor_pilot 28570 32429
[2026-03-13 12:42:32] 2026-03-13 11:42:29,620 [wrapper] Test setup, not cleaning
[2026-03-13 12:42:32] 2026-03-13 11:42:29,721 [wrapper] apfmon messages muted
[2026-03-13 12:42:32] 2026-03-13 11:42:29,786 [wrapper] ==== wrapper stdout END ====
[2026-03-13 12:42:32] 2026-03-13 11:42:29,856 [wrapper] ==== wrapper stderr END ====
[2026-03-13 12:42:32]  *** Error codes and diagnostics ***
[2026-03-13 12:42:32]     "exeErrorCode": 0,
[2026-03-13 12:42:32]     "exeErrorDiag": "",
[2026-03-13 12:42:32]     "pilotErrorCode": 0,
[2026-03-13 12:42:32]     "pilotErrorDiag": "",
[2026-03-13 12:42:32]  *** Listing of results directory ***
[2026-03-13 12:42:32] total 417204
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc    585013 Mar 12 17:09 pilot3.tar.gz
[2026-03-13 12:42:32] -rwx------. 1 boinc boinc     36322 Mar 12 17:13 runpilot2-wrapper.sh
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc      5111 Mar 12 17:13 queuedata.json
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc       100 Mar 13 07:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 12:42:32] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 07:43 run_atlas
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc       105 Mar 13 07:43 job.xml
[2026-03-13 12:42:32] -rw-r--r--. 2 boinc boinc 215797976 Mar 13 07:43 EVNT.48967083._000650.pool.root.1
[2026-03-13 12:42:32] -rw-r--r--. 2 boinc boinc    597529 Mar 13 07:43 input.tar.gz
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc      6390 Mar 13 07:43 init_data.xml
[2026-03-13 12:42:32] -rw-r--r--. 2 boinc boinc     15845 Mar 13 07:43 start_atlas.sh
[2026-03-13 12:42:32] drwxrwx--x. 2 boinc boinc        68 Mar 13 07:43 shared
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc         0 Mar 13 07:43 boinc_lockfile
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc      2563 Mar 13 07:43 pandaJob.out
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc       415 Mar 13 07:48 workernode_map.json
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc   1006522 Mar 13 07:48 agis_schedconf.cvmfs.json
[2026-03-13 12:42:32] drwx------. 5 boinc boinc      4096 Mar 13 07:48 pilot3
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc 201593400 Mar 13 12:40 HITS.48967085._016108.pool.root.1
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc       531 Mar 13 12:40 boinc_task_state.xml
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc      1012 Mar 13 12:41 memory_monitor_summary.json
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc   1511578 Mar 13 12:41 agis_ddmendpoints.agis.ALL.json
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc    501088 Mar 13 12:41 log.48967085._016108.job.log.tgz.1
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc      6314 Mar 13 12:41 heartbeat.json
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc        28 Mar 13 12:42 wrapper_checkpoint.txt
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc      8192 Mar 13 12:42 boinc_mmap_file
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc        95 Mar 13 12:42 pilot_heartbeat.json
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc       890 Mar 13 12:42 pilotlog.txt
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc   2452883 Mar 13 12:42 log.48967085._016108.job.log.1
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc       357 Mar 13 12:42 output.list
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc       620 Mar 13 12:42 runtime_log
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc   2969600 Mar 13 12:42 result.tar.gz
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc      8816 Mar 13 12:42 runtime_log.err
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc       656 Mar 13 12:42 CCMMDmtpxK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmXdkLDmkeI3zn.diag
[2026-03-13 12:42:32] -rw-r--r--. 1 boinc boinc     20696 Mar 13 12:42 stderr.txt
[2026-03-13 12:42:32] HITS file was successfully produced:
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc 201593400 Mar 13 12:40 shared/HITS.pool.root.1
[2026-03-13 12:42:32]  *** Contents of shared directory: ***
[2026-03-13 12:42:32] total 411116
[2026-03-13 12:42:32] -rw-r--r--. 2 boinc boinc 215797976 Mar 13 07:43 ATLAS.root_0
[2026-03-13 12:42:32] -rw-r--r--. 2 boinc boinc    597529 Mar 13 07:43 input.tar.gz
[2026-03-13 12:42:32] -rw-r--r--. 2 boinc boinc     15845 Mar 13 07:43 start_atlas.sh
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc 201593400 Mar 13 12:40 HITS.pool.root.1
[2026-03-13 12:42:32] -rw-------. 1 boinc boinc   2969600 Mar 13 12:42 result.tar.gz
12:42:34 (28336): run_atlas exited; CPU time 67951.144432
12:42:34 (28336): called boinc_finish(0)

</stderr_txt>
]]>

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