Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:18:13 (1047698): wrapper (7.7.26015): starting
20:18:13 (1047698): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 20:18:13] Arguments: --nthreads 8
[2026-03-12 20:18:13] Threads: 8
[2026-03-12 20:18:13] Checking for CVMFS
[2026-03-12 20:18:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 20:18:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 20:18:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 20:18:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 20:18:13] 2.11.3.0 3753445 146822 234972 157225 3 17 38330084 45568001 12314 130560 0 857917022 99.820 491048888 19500 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-12 20:18:13] CVMFS is ok
[2026-03-12 20:18:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 20:18:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 20:18:13] Further information can be found at the LHC@home message board.
[2026-03-12 20:18:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 20:18:13] Checking for apptainer binary...
[2026-03-12 20:18:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 20:18:13] Running /usr/bin/apptainer --version
[2026-03-12 20:18:13] apptainer version 1.4.1-1.el9
[2026-03-12 20:18:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 20:18:14] wns0010.triumf.lcg
[2026-03-12 20:18:14] apptainer works
[2026-03-12 20:18:14] Set ATHENA_PROC_NUMBER=8
[2026-03-12 20:18:14] Set ATHENA_CORE_NUMBER=8
[2026-03-12 20:18:14] Starting ATLAS job with PandaID=7043586534
[2026-03-12 20:18:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 20:21:35]  *** The last 200 lines of the pilot log: ***
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | will not add max space = 0 B to job metrics
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | WARNING  | wrong length of table data, x=[1773371927.0], y=[1102.0] (must be same and length>=4)
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | ..............................
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | . Timing measurements:
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | . get job = 0 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | . initial setup = 6 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . payload setup = 4 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . stage-in = 0 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . payload execution = 16 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . stage-out = 0 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . log creation = 0 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | ..............................
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043586534/pilotlog.txt
[2026-03-12 20:21:35] 2026-03-13 03:21:01,742 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-12 20:21:35] - Log from pilotlog.txt -
[2026-03-12 20:21:35] 2026-03-13 03:21:01,727 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 20:21:35] 2026-03-13 03:21:01,727 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 20:21:35] 2026-03-13 03:21:01,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 20:21:35] 2026-03-13 03:21:01,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 20:21:35] 2026-03-13 03:21:01,728 | WARNING  | found no stored workdir sizes
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | will not add max space = 0 B to job metrics
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | WARNING  | wrong length of table data, x=[1773371927.0], y=[1102.0] (must be same and length>=4)
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | ..............................
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | . Timing measurements:
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | . get job = 0 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | . initial setup = 6 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . payload setup = 4 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . stage-in = 0 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . payload execution = 16 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . stage-out = 0 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . log creation = 0 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | ..............................
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043586534/pilotlog.txt
[2026-03-12 20:21:35] 2026-03-13 03:21:01,742 | WARNING  | 
[2026-03-12 20:21:35] [begin log extracts]
[2026-03-12 20:21:35] - Log from pilotlog.txt -
[2026-03-12 20:21:35] 2026-03-13 03:21:01,727 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 20:21:35] 2026-03-13 03:21:01,727 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 20:21:35] 2026-03-13 03:21:01,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 20:21:35] 2026-03-13 03:21:01,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 20:21:35] 2026-03-13 03:21:01,728 | WARNING  | found no stored workdir sizes
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | will not add max space = 0 B to job metrics
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | WARNING  | wrong length of table data, x=[1773371927.0], y=[1102.0] (must be same and length>=4)
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | ..............................
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | . Timing measurements:
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | . get job = 0 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,729 | INFO     | . initial setup = 6 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . payload setup = 4 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . stage-in = 0 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . payload execution = 16 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . stage-out = 0 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | . log creation = 0 s
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | ..............................
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 20:21:35] 2026-03-13 03:21:01,730 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043586534/pilotlog.txt
[2026-03-12 20:21:35] [end log extracts]
[2026-03-12 20:21:35] 2026-03-13 03:21:01,742 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-12 20:21:35] 2026-03-13 03:21:01,743 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-12 20:21:35] 2026-03-13 03:21:02,087 | INFO     | 
[2026-03-12 20:21:35] 2026-03-13 03:21:02,088 | INFO     | job summary report
[2026-03-12 20:21:35] 2026-03-13 03:21:02,088 | INFO     | --------------------------------------------------
[2026-03-12 20:21:35] 2026-03-13 03:21:02,088 | INFO     | PanDA job id: 7043586534
[2026-03-12 20:21:35] 2026-03-13 03:21:02,088 | INFO     | task id: 48955006
[2026-03-12 20:21:35] 2026-03-13 03:21:02,088 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-12 20:18:55,216 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-12 20:21:35] 2026-03-13 03:21:02,088 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 20:21:35] 2026-03-13 03:21:02,088 | INFO     | pilot state: failed 
[2026-03-12 20:21:35] 2026-03-13 03:21:02,088 | INFO     | transexitcode: 65
[2026-03-12 20:21:35] 2026-03-13 03:21:02,088 | INFO     | exeerrorcode: 65
[2026-03-12 20:21:35] 2026-03-13 03:21:02,088 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 20:21:35] 2026-03-13 03:21:02,088 | INFO     | exitcode: 65
[2026-03-12 20:21:35] 2026-03-13 03:21:02,089 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 20:21:35] 2026-03-13 03:21:02,089 | INFO     | cpuconsumptiontime: 14 s
[2026-03-12 20:21:35] 2026-03-13 03:21:02,089 | INFO     | nevents: 0
[2026-03-12 20:21:35] 2026-03-13 03:21:02,089 | INFO     | neventsw: 0
[2026-03-12 20:21:35] 2026-03-13 03:21:02,089 | INFO     | pid: 1055857
[2026-03-12 20:21:35] 2026-03-13 03:21:02,089 | INFO     | pgrp: 1055857
[2026-03-12 20:21:35] 2026-03-13 03:21:02,089 | INFO     | corecount: 8
[2026-03-12 20:21:35] 2026-03-13 03:21:02,089 | INFO     | event service: False
[2026-03-12 20:21:35] 2026-03-13 03:21:02,089 | INFO     | sizes: {0: 2280021, 1: 2280255, 11: 2280255, 24: 2303550, 25: 2307842, 27: 2307870, 144: 2308164}
[2026-03-12 20:21:35] 2026-03-13 03:21:02,089 | INFO     | --------------------------------------------------
[2026-03-12 20:21:35] 2026-03-13 03:21:02,089 | INFO     | 
[2026-03-12 20:21:35] 2026-03-13 03:21:02,089 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-12 20:21:35] 2026-03-13 03:21:02,105 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,106 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,106 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,106 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,106 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,106 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,107 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 20:21:35] 2026-03-13 03:21:02,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,107 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 20:21:35] 2026-03-13 03:21:02,107 | INFO     | job 7043586534 has completed (purged errors)
[2026-03-12 20:21:35] 2026-03-13 03:21:02,107 | INFO     | overall cleanup function is called
[2026-03-12 20:21:35] 2026-03-13 03:21:02,636 | INFO     | PID=1051348 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 20:21:35] 2026-03-13 03:21:02,636 | INFO     | .. there are 19 such processes running
[2026-03-12 20:21:35] 2026-03-13 03:21:03,114 | INFO     | --- collectZombieJob: --- 10, [1055857]
[2026-03-12 20:21:35] 2026-03-13 03:21:03,114 | INFO     | zombie collector waiting for pid 1055857
[2026-03-12 20:21:35] 2026-03-13 03:21:03,114 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 20:21:35] 2026-03-13 03:21:03,114 | INFO     | collected zombie processes
[2026-03-12 20:21:35] 2026-03-13 03:21:03,114 | INFO     | will attempt to kill all subprocesses of pid=1055857
[2026-03-12 20:21:35] 2026-03-13 03:21:03,289 | INFO     | process IDs to be killed: [1055857] (in reverse order)
[2026-03-12 20:21:35] 2026-03-13 03:21:03,342 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 20:21:35] 2026-03-13 03:21:03,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 20:21:35] 2026-03-13 03:21:03,349 | INFO     | did not find any defunct processes belonging to 1055857
[2026-03-12 20:21:35] 2026-03-13 03:21:03,355 | INFO     | did not find any defunct processes belonging to 1055857
[2026-03-12 20:21:35] 2026-03-13 03:21:03,356 | INFO     | ready for new job
[2026-03-12 20:21:35] 2026-03-13 03:21:03,356 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 20:21:35] 2026-03-13 03:21:03,357 | INFO     | **************************************
[2026-03-12 20:21:35] 2026-03-13 03:21:03,358 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 20:21:35] 2026-03-13 03:21:03,358 | INFO     | **************************************
[2026-03-12 20:21:35] 2026-03-13 03:21:03,358 | INFO     | 
[2026-03-12 20:21:35] 2026-03-13 03:21:03,360 | INFO     | architecture information:
[2026-03-12 20:21:35] 2026-03-13 03:21:03,360 | INFO     | executing command: cat /etc/os-release
[2026-03-12 20:21:35] 2026-03-13 03:21:03,372 | INFO     | cat /etc/os-release:
[2026-03-12 20:21:35] NAME="CentOS Linux"
[2026-03-12 20:21:35] VERSION="7 (Core)"
[2026-03-12 20:21:35] ID="centos"
[2026-03-12 20:21:35] ID_LIKE="rhel fedora"
[2026-03-12 20:21:35] VERSION_ID="7"
[2026-03-12 20:21:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 20:21:35] ANSI_COLOR="0;31"
[2026-03-12 20:21:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 20:21:35] HOME_URL="https://www.centos.org/"
[2026-03-12 20:21:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 20:21:35] 
[2026-03-12 20:21:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 20:21:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 20:21:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 20:21:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 20:21:35] 
[2026-03-12 20:21:35] 2026-03-13 03:21:03,373 | INFO     | **************************************
[2026-03-12 20:21:35] 2026-03-13 03:21:03,876 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-12 20:21:35] 2026-03-13 03:21:03,888 | INFO     | sufficient remaining disk space (1372166553600 B)
[2026-03-12 20:21:35] 2026-03-13 03:21:03,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 20:21:35] 2026-03-13 03:21:03,889 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 20:21:35] 2026-03-13 03:21:03,889 | INFO     | update_server=False
[2026-03-12 20:21:35] 2026-03-13 03:21:03,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 20:21:35] 2026-03-13 03:21:03,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 20:21:35] 2026-03-13 03:21:03,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 20:21:35] 2026-03-13 03:21:03,890 | INFO     | aborting loop
[2026-03-12 20:21:35] 2026-03-13 03:21:04,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 20:21:35] 2026-03-13 03:21:04,690 | INFO     | all data control threads have been joined
[2026-03-12 20:21:35] 2026-03-13 03:21:04,891 | INFO     | [job] retrieve thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:04,891 | INFO     | [job] job monitor thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:04,914 | INFO     | all payload control threads have been joined
[2026-03-12 20:21:35] 2026-03-13 03:21:04,943 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:05,028 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:05,147 | INFO     | [data] copytool_in thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:05,193 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:05,377 | INFO     | [payload] failed_post thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:05,545 | INFO     | all job control threads have been joined
[2026-03-12 20:21:35] 2026-03-13 03:21:05,695 | INFO     | [data] control thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:05,919 | INFO     | [payload] control thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:06,106 | INFO     | [data] copytool_out thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:06,125 | INFO     | [job] validate thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:06,322 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:06,324 | INFO     | [payload] validate_post thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:06,550 | INFO     | [job] control thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:06,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 20:21:35] 2026-03-13 03:21:07,828 | INFO     | [job] queue monitor thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:07,895 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 20:21:35] 2026-03-13 03:21:26,903 | INFO     | [monitor] cgroup control has ended
[2026-03-12 20:21:35] 2026-03-13 03:21:28,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140387496392512)>', '<ExcThread(monitor, started 140386357991168)>']
[2026-03-12 20:21:35] 2026-03-13 03:21:33,428 | INFO     | all workflow threads have been joined
[2026-03-12 20:21:35] 2026-03-13 03:21:33,428 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 20:21:35] 2026-03-13 03:21:33,429 | INFO     | traces error code: 0
[2026-03-12 20:21:35] 2026-03-13 03:21:33,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 20:21:35] 2026-03-13 03:21:34,934 | INFO     | PID=1051348 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 20:21:35] 2026-03-13 03:21:34,935 | INFO     | .. there are 19 such processes running
[2026-03-12 20:21:35] 2026-03-13 03:21:34,935 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 20:21:35] 2026-03-13 03:21:34,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 20:21:35] 2026-03-13 03:21:34,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 20:21:35] 2026-03-13 03:21:34,936 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 20:21:35] 2026-03-13 03:21:34,936 | INFO     | [monitor] control thread has ended
[2026-03-12 20:21:35] 2026-03-13 03:21:35,039 [wrapper] ==== pilot stdout END ====
[2026-03-12 20:21:35] 2026-03-13 03:21:35,041 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 20:21:35] 2026-03-13 03:21:35,043 [wrapper] pilotpid: 1051348
[2026-03-12 20:21:35] 2026-03-13 03:21:35,044 [wrapper] Pilot exit status: 0
[2026-03-12 20:21:35] 2026-03-13 03:21:35,050 [wrapper] pandaids: 7043586534
[2026-03-12 20:21:35] 2026-03-13 03:21:35,081 [wrapper] cleanup supervisor_pilot 1051354 1051349
[2026-03-12 20:21:35] 2026-03-13 03:21:35,083 [wrapper] Test setup, not cleaning
[2026-03-12 20:21:35] 2026-03-13 03:21:35,085 [wrapper] apfmon messages muted
[2026-03-12 20:21:35] 2026-03-13 03:21:35,087 [wrapper] ==== wrapper stdout END ====
[2026-03-12 20:21:35] 2026-03-13 03:21:35,089 [wrapper] ==== wrapper stderr END ====
[2026-03-12 20:21:35]  *** Error codes and diagnostics ***
[2026-03-12 20:21:35]     "exeErrorCode": 65,
[2026-03-12 20:21:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 20:21:35]     "pilotErrorCode": 1305,
[2026-03-12 20:21:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 20:21:35]  *** Listing of results directory ***
[2026-03-12 20:21:35] total 438856
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc    585013 Mar 12 14:12 pilot3.tar.gz
[2026-03-12 20:21:35] -rwx------. 1 boinc boinc     36322 Mar 12 14:13 runpilot2-wrapper.sh
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc      5111 Mar 12 14:15 queuedata.json
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc       100 Mar 12 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 20:21:35] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 20:18 run_atlas
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc       105 Mar 12 20:18 job.xml
[2026-03-12 20:21:35] -rw-r--r--. 2 boinc boinc 445256160 Mar 12 20:18 EVNT.46701403._000956.pool.root.1
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc      6444 Mar 12 20:18 init_data.xml
[2026-03-12 20:21:35] -rw-r--r--. 2 boinc boinc     15845 Mar 12 20:18 start_atlas.sh
[2026-03-12 20:21:35] drwxrwx--x. 2 boinc boinc      4096 Mar 12 20:18 shared
[2026-03-12 20:21:35] -rw-r--r--. 2 boinc boinc    597537 Mar 12 20:18 input.tar.gz
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc         0 Mar 12 20:18 boinc_lockfile
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc      2564 Mar 12 20:18 pandaJob.out
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc   1006514 Mar 12 20:18 agis_schedconf.cvmfs.json
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc   1511578 Mar 12 20:18 agis_ddmendpoints.agis.ALL.json
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc       436 Mar 12 20:18 workernode_map.json
[2026-03-12 20:21:35] drwx------. 5 boinc boinc      4096 Mar 12 20:18 pilot3
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc       523 Mar 12 20:18 boinc_task_state.xml
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc       951 Mar 12 20:18 memory_monitor_summary.json
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc     20072 Mar 12 20:19 log.48955006._048284.job.log.tgz.1
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc      6989 Mar 12 20:21 heartbeat.json
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc      8192 Mar 12 20:21 boinc_mmap_file
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc        22 Mar 12 20:21 wrapper_checkpoint.txt
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc       823 Mar 12 20:21 pilotlog.txt
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc        95 Mar 12 20:21 pilot_heartbeat.json
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc     80876 Mar 12 20:21 log.48955006._048284.job.log.1
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc       188 Mar 12 20:21 output.list
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc       620 Mar 12 20:21 runtime_log
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc    122880 Mar 12 20:21 result.tar.gz
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc       646 Mar 12 20:21 tNVMDmvW2K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmMMlLDmU5tzFm.diag
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc      8633 Mar 12 20:21 runtime_log.err
[2026-03-12 20:21:35] -rw-r--r--. 1 boinc boinc     21759 Mar 12 20:21 stderr.txt
[2026-03-12 20:21:35] No HITS result produced
[2026-03-12 20:21:35]  *** Contents of shared directory: ***
[2026-03-12 20:21:35] total 435548
[2026-03-12 20:21:35] -rw-r--r--. 2 boinc boinc 445256160 Mar 12 20:18 ATLAS.root_0
[2026-03-12 20:21:35] -rw-r--r--. 2 boinc boinc     15845 Mar 12 20:18 start_atlas.sh
[2026-03-12 20:21:35] -rw-r--r--. 2 boinc boinc    597537 Mar 12 20:18 input.tar.gz
[2026-03-12 20:21:35] -rw-------. 1 boinc boinc    122880 Mar 12 20:21 result.tar.gz
20:21:36 (1047698): run_atlas exited; CPU time 18.444214
20:21:36 (1047698): called boinc_finish(0)

</stderr_txt>
]]>

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