Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:37:45 (451400): wrapper (7.7.26015): starting
20:37:45 (451400): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 20:37:45] Arguments: --nthreads 12
[2026-03-12 20:37:45] Threads: 12
[2026-03-12 20:37:45] Checking for CVMFS
[2026-03-12 20:37:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 20:37:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 20:37:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 20:37:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 20:37:49] 2.11.5.0 3857663 146756 339332 157225 3 202 43278252 45568001 30206 130560 0 866213256 99.811 498355808 17468 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-03-12 20:37:49] CVMFS is ok
[2026-03-12 20:37:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 20:37:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 20:37:49] Further information can be found at the LHC@home message board.
[2026-03-12 20:37:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 20:37:49] Checking for apptainer binary...
[2026-03-12 20:37:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 20:37:49] Running /usr/bin/apptainer --version
[2026-03-12 20:37:49] apptainer version 1.4.1-1.el9
[2026-03-12 20:37:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 20:37:51] wns0075.triumf.lcg
[2026-03-12 20:37:51] apptainer works
[2026-03-12 20:37:51] Set ATHENA_PROC_NUMBER=12
[2026-03-12 20:37:51] Set ATHENA_CORE_NUMBER=12
[2026-03-12 20:37:51] Starting ATLAS job with PandaID=7043587009
[2026-03-12 20:37:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 20:45:47]  *** The last 200 lines of the pilot log: ***
[2026-03-12 20:45:47] 2026-03-13 03:44:40,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 20:45:47] 2026-03-13 03:44:40,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | WARNING  | wrong length of table data, x=[1773373277.0, 1773373338.0], y=[1506.0, 604416.0] (must be same and length>=4)
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | INFO     | ..............................
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | INFO     | . Timing measurements:
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | INFO     | . get job = 0 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . initial setup = 44 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . payload setup = 49 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . stage-in = 0 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . payload execution = 122 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . stage-out = 2 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . log creation = 0 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | ..............................
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043587009/pilotlog.txt
[2026-03-12 20:45:47] 2026-03-13 03:44:40,504 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-12 20:45:47] - Log from pilotlog.txt -
[2026-03-12 20:45:47] 2026-03-13 03:44:40,432 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7043587009/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 20:45:47] 2026-03-13 03:44:40,433 | INFO     | extracted standard info from prmon json
[2026-03-12 20:45:47] 2026-03-13 03:44:40,433 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 20:45:47] 2026-03-13 03:44:40,433 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 20:45:47] 2026-03-13 03:44:40,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 20:45:47] 2026-03-13 03:44:40,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | WARNING  | wrong length of table data, x=[1773373277.0, 1773373338.0], y=[1506.0, 604416.0] (must be same and length>=4)
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | INFO     | ..............................
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | INFO     | . Timing measurements:
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | INFO     | . get job = 0 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . initial setup = 44 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . payload setup = 49 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . stage-in = 0 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . payload execution = 122 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . stage-out = 2 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . log creation = 0 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | ..............................
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043587009/pilotlog.txt
[2026-03-12 20:45:47] 2026-03-13 03:44:40,504 | WARNING  | 
[2026-03-12 20:45:47] [begin log extracts]
[2026-03-12 20:45:47] - Log from pilotlog.txt -
[2026-03-12 20:45:47] 2026-03-13 03:44:40,432 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7043587009/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 20:45:47] 2026-03-13 03:44:40,433 | INFO     | extracted standard info from prmon json
[2026-03-12 20:45:47] 2026-03-13 03:44:40,433 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 20:45:47] 2026-03-13 03:44:40,433 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 20:45:47] 2026-03-13 03:44:40,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 20:45:47] 2026-03-13 03:44:40,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | WARNING  | wrong length of table data, x=[1773373277.0, 1773373338.0], y=[1506.0, 604416.0] (must be same and length>=4)
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | INFO     | ..............................
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | INFO     | . Timing measurements:
[2026-03-12 20:45:47] 2026-03-13 03:44:40,438 | INFO     | . get job = 0 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . initial setup = 44 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . payload setup = 49 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . stage-in = 0 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . payload execution = 122 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . stage-out = 2 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | . log creation = 0 s
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | ..............................
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 20:45:47] 2026-03-13 03:44:40,439 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043587009/pilotlog.txt
[2026-03-12 20:45:47] [end log extracts]
[2026-03-12 20:45:47] 2026-03-13 03:44:40,505 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-12 20:45:47] 2026-03-13 03:44:40,506 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-12 20:45:47] 2026-03-13 03:44:41,085 | INFO     | time since job start (301s) is within the limit (345600.0s)
[2026-03-12 20:45:47] 2026-03-13 03:44:41,094 | INFO     | 
[2026-03-12 20:45:47] 2026-03-13 03:44:41,094 | INFO     | job summary report
[2026-03-12 20:45:47] 2026-03-13 03:44:41,095 | INFO     | --------------------------------------------------
[2026-03-12 20:45:47] 2026-03-13 03:44:41,095 | INFO     | PanDA job id: 7043587009
[2026-03-12 20:45:47] 2026-03-13 03:44:41,095 | INFO     | task id: 48955010
[2026-03-12 20:45:47] 2026-03-13 03:44:41,095 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-12 20:42:29,662 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-12 20:45:47] 2026-03-13 03:44:41,095 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 20:45:47] 2026-03-13 03:44:41,095 | INFO     | pilot state: failed 
[2026-03-12 20:45:47] 2026-03-13 03:44:41,095 | INFO     | transexitcode: 65
[2026-03-12 20:45:47] 2026-03-13 03:44:41,095 | INFO     | exeerrorcode: 65
[2026-03-12 20:45:47] 2026-03-13 03:44:41,095 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 20:45:47] 2026-03-13 03:44:41,095 | INFO     | exitcode: 65
[2026-03-12 20:45:47] 2026-03-13 03:44:41,095 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 20:45:47] 2026-03-13 03:44:41,095 | INFO     | cpuconsumptiontime: 24 s
[2026-03-12 20:45:47] 2026-03-13 03:44:41,096 | INFO     | nevents: 0
[2026-03-12 20:45:47] 2026-03-13 03:44:41,096 | INFO     | neventsw: 0
[2026-03-12 20:45:47] 2026-03-13 03:44:41,096 | INFO     | pid: 466456
[2026-03-12 20:45:47] 2026-03-13 03:44:41,096 | INFO     | pgrp: 466456
[2026-03-12 20:45:47] 2026-03-13 03:44:41,096 | INFO     | corecount: 12
[2026-03-12 20:45:47] 2026-03-13 03:44:41,096 | INFO     | event service: False
[2026-03-12 20:45:47] 2026-03-13 03:44:41,096 | INFO     | sizes: {0: 2279087, 1: 2279769, 2: 2279797, 3: 2279797, 4: 2280230, 5: 2280258, 176: 2303715, 179: 2308035, 296: 2308173}
[2026-03-12 20:45:47] 2026-03-13 03:44:41,096 | INFO     | --------------------------------------------------
[2026-03-12 20:45:47] 2026-03-13 03:44:41,096 | INFO     | 
[2026-03-12 20:45:47] 2026-03-13 03:44:41,096 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-12 20:45:47] 2026-03-13 03:44:41,315 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,315 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,315 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,315 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,316 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,316 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,316 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,316 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,316 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,317 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 20:45:47] 2026-03-13 03:44:41,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,317 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 20:45:47] 2026-03-13 03:44:41,317 | INFO     | job 7043587009 has completed (purged errors)
[2026-03-12 20:45:47] 2026-03-13 03:44:41,317 | INFO     | overall cleanup function is called
[2026-03-12 20:45:47] 2026-03-13 03:44:42,361 | INFO     | --- collectZombieJob: --- 10, [466456]
[2026-03-12 20:45:47] 2026-03-13 03:44:42,361 | INFO     | zombie collector waiting for pid 466456
[2026-03-12 20:45:47] 2026-03-13 03:44:42,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 20:45:47] 2026-03-13 03:44:42,362 | INFO     | collected zombie processes
[2026-03-12 20:45:47] 2026-03-13 03:44:42,362 | INFO     | will attempt to kill all subprocesses of pid=466456
[2026-03-12 20:45:47] 2026-03-13 03:44:43,737 | INFO     | process IDs to be killed: [466456] (in reverse order)
[2026-03-12 20:45:47] 2026-03-13 03:44:44,799 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 20:45:47] 2026-03-13 03:44:44,799 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 20:45:47] 2026-03-13 03:44:44,882 | INFO     | did not find any defunct processes belonging to 466456
[2026-03-12 20:45:47] 2026-03-13 03:44:44,949 | INFO     | did not find any defunct processes belonging to 466456
[2026-03-12 20:45:47] 2026-03-13 03:44:44,950 | INFO     | ready for new job
[2026-03-12 20:45:47] 2026-03-13 03:44:44,950 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 20:45:47] 2026-03-13 03:44:44,989 | INFO     | **************************************
[2026-03-12 20:45:47] 2026-03-13 03:44:45,011 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 20:45:47] 2026-03-13 03:44:45,011 | INFO     | **************************************
[2026-03-12 20:45:47] 2026-03-13 03:44:45,011 | INFO     | 
[2026-03-12 20:45:47] 2026-03-13 03:44:45,015 | INFO     | architecture information:
[2026-03-12 20:45:47] 2026-03-13 03:44:45,035 | INFO     | executing command: cat /etc/os-release
[2026-03-12 20:45:47] 2026-03-13 03:44:45,088 | INFO     | cat /etc/os-release:
[2026-03-12 20:45:47] NAME="CentOS Linux"
[2026-03-12 20:45:47] VERSION="7 (Core)"
[2026-03-12 20:45:47] ID="centos"
[2026-03-12 20:45:47] ID_LIKE="rhel fedora"
[2026-03-12 20:45:47] VERSION_ID="7"
[2026-03-12 20:45:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 20:45:47] ANSI_COLOR="0;31"
[2026-03-12 20:45:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 20:45:47] HOME_URL="https://www.centos.org/"
[2026-03-12 20:45:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 20:45:47] 
[2026-03-12 20:45:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 20:45:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 20:45:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 20:45:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 20:45:47] 
[2026-03-12 20:45:47] 2026-03-13 03:44:45,089 | INFO     | **************************************
[2026-03-12 20:45:47] 2026-03-13 03:44:45,592 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-12 20:45:47] 2026-03-13 03:44:45,678 | INFO     | sufficient remaining disk space (2150597918720 B)
[2026-03-12 20:45:47] 2026-03-13 03:44:45,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 20:45:47] 2026-03-13 03:44:45,678 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 20:45:47] 2026-03-13 03:44:45,678 | INFO     | update_server=False
[2026-03-12 20:45:47] 2026-03-13 03:44:45,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 20:45:47] 2026-03-13 03:44:45,679 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 20:45:47] 2026-03-13 03:44:45,695 | INFO     | all payload control threads have been joined
[2026-03-12 20:45:47] 2026-03-13 03:44:45,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 20:45:47] 2026-03-13 03:44:45,805 | INFO     | aborting loop
[2026-03-12 20:45:47] 2026-03-13 03:44:45,941 | INFO     | all data control threads have been joined
[2026-03-12 20:45:47] 2026-03-13 03:44:46,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 20:45:47] 2026-03-13 03:44:46,326 | INFO     | all job control threads have been joined
[2026-03-12 20:45:47] 2026-03-13 03:44:46,684 | INFO     | [job] retrieve thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:46,701 | INFO     | [payload] control thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:46,814 | INFO     | [job] job monitor thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:46,947 | INFO     | [data] control thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:47,016 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:47,017 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:47,137 | INFO     | [job] queue monitor thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:47,332 | INFO     | [job] control thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:47,635 | INFO     | [job] validate thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:47,636 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:47,687 | INFO     | [data] copytool_out thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:47,797 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 20:45:47] 2026-03-13 03:44:47,802 | INFO     | [data] copytool_in thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:47,863 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:48,100 | INFO     | [payload] failed_post thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:48,276 | INFO     | [payload] validate_post thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:44:51,812 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 20:45:47] 2026-03-13 03:45:15,541 | INFO     | PID=458272 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 20:45:47] 2026-03-13 03:45:15,541 | INFO     | .. there are 49 such processes running
[2026-03-12 20:45:47] 2026-03-13 03:45:15,542 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 20:45:47] 2026-03-13 03:45:15,542 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 20:45:47] 2026-03-13 03:45:15,542 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 20:45:47] 2026-03-13 03:45:39,756 | INFO     | [monitor] cgroup control has ended
[2026-03-12 20:45:47] 2026-03-13 03:45:40,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140291644737344)>', '<ExcThread(monitor, started 140291256338176)>']
[2026-03-12 20:45:47] 2026-03-13 03:45:40,720 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 20:45:47] 2026-03-13 03:45:40,720 | INFO     | [monitor] control thread has ended
[2026-03-12 20:45:47] 2026-03-13 03:45:45,200 | INFO     | all workflow threads have been joined
[2026-03-12 20:45:47] 2026-03-13 03:45:45,200 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 20:45:47] 2026-03-13 03:45:45,201 | INFO     | traces error code: 0
[2026-03-12 20:45:47] 2026-03-13 03:45:45,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 20:45:47] 2026-03-13 03:45:45,479 [wrapper] ==== pilot stdout END ====
[2026-03-12 20:45:47] 2026-03-13 03:45:45,507 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 20:45:47] 2026-03-13 03:45:45,522 [wrapper] pilotpid: 458272
[2026-03-12 20:45:47] 2026-03-13 03:45:45,537 [wrapper] Pilot exit status: 0
[2026-03-12 20:45:47] 2026-03-13 03:45:45,752 [wrapper] pandaids: 7043587009
[2026-03-12 20:45:47] 2026-03-13 03:45:46,455 [wrapper] cleanup supervisor_pilot  458279 458273
[2026-03-12 20:45:47] 2026-03-13 03:45:46,474 [wrapper] Test setup, not cleaning
[2026-03-12 20:45:47] 2026-03-13 03:45:46,492 [wrapper] apfmon messages muted
[2026-03-12 20:45:47] 2026-03-13 03:45:46,539 [wrapper] ==== wrapper stdout END ====
[2026-03-12 20:45:47] 2026-03-13 03:45:46,577 [wrapper] ==== wrapper stderr END ====
[2026-03-12 20:45:47]  *** Error codes and diagnostics ***
[2026-03-12 20:45:47]     "exeErrorCode": 65,
[2026-03-12 20:45:47]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 20:45:47]     "pilotErrorCode": 1305,
[2026-03-12 20:45:47]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 20:45:47]  *** Listing of results directory ***
[2026-03-12 20:45:47] total 430404
[2026-03-12 20:45:47] -rwx------. 1 boinc boinc     36322 Mar 12 14:11 runpilot2-wrapper.sh
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc      5111 Mar 12 14:12 queuedata.json
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc    585013 Mar 12 14:12 pilot3.tar.gz
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc       100 Mar 12 20:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 20:45:47] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 20:37 run_atlas
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc       105 Mar 12 20:37 job.xml
[2026-03-12 20:45:47] -rw-r--r--. 2 boinc boinc 436567663 Mar 12 20:37 EVNT.46701403._001504.pool.root.1
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc      6593 Mar 12 20:37 init_data.xml
[2026-03-12 20:45:47] -rw-r--r--. 2 boinc boinc     15845 Mar 12 20:37 start_atlas.sh
[2026-03-12 20:45:47] drwxrwx--x. 2 boinc boinc      4096 Mar 12 20:37 shared
[2026-03-12 20:45:47] -rw-r--r--. 2 boinc boinc    597526 Mar 12 20:37 input.tar.gz
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc         0 Mar 12 20:37 boinc_lockfile
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc      2562 Mar 12 20:37 pandaJob.out
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc   1006514 Mar 12 20:38 agis_schedconf.cvmfs.json
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc   1511578 Mar 12 20:38 agis_ddmendpoints.agis.ALL.json
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc       444 Mar 12 20:39 workernode_map.json
[2026-03-12 20:45:47] drwx------. 5 boinc boinc      4096 Mar 12 20:39 pilot3
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc       524 Mar 12 20:42 boinc_task_state.xml
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc       988 Mar 12 20:42 memory_monitor_summary.json
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc     22812 Mar 12 20:42 log.48955010._025479.job.log.tgz.1
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc      7041 Mar 12 20:44 heartbeat.json
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc        95 Mar 12 20:45 pilot_heartbeat.json
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc      4818 Mar 12 20:45 pilotlog.txt
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc      8192 Mar 12 20:45 boinc_mmap_file
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc     96432 Mar 12 20:45 log.48955010._025479.job.log.1
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc       188 Mar 12 20:45 output.list
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc       620 Mar 12 20:45 runtime_log
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc    133120 Mar 12 20:45 result.tar.gz
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc      8635 Mar 12 20:45 runtime_log.err
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc       643 Mar 12 20:45 ojoKDm6U2K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmnKlLDmryaYJo.diag
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc        23 Mar 12 20:45 wrapper_checkpoint.txt
[2026-03-12 20:45:47] -rw-r--r--. 1 boinc boinc     21887 Mar 12 20:45 stderr.txt
[2026-03-12 20:45:47] No HITS result produced
[2026-03-12 20:45:47]  *** Contents of shared directory: ***
[2026-03-12 20:45:47] total 427072
[2026-03-12 20:45:47] -rw-r--r--. 2 boinc boinc 436567663 Mar 12 20:37 ATLAS.root_0
[2026-03-12 20:45:47] -rw-r--r--. 2 boinc boinc     15845 Mar 12 20:37 start_atlas.sh
[2026-03-12 20:45:47] -rw-r--r--. 2 boinc boinc    597526 Mar 12 20:37 input.tar.gz
[2026-03-12 20:45:47] -rw-------. 1 boinc boinc    133120 Mar 12 20:45 result.tar.gz
20:45:49 (451400): run_atlas exited; CPU time 40.464886
20:45:49 (451400): called boinc_finish(0)

</stderr_txt>
]]>

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