Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:34:29 (3739): wrapper (7.7.26015): starting
08:34:29 (3739): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 08:34:29] Arguments: --nthreads 8
[2026-03-13 08:34:29] Threads: 8
[2026-03-13 08:34:29] Checking for CVMFS
[2026-03-13 08:34:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 08:34:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 08:34:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 08:34:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 08:34:31] 2.11.2.0 1035 125842 133176 157232 0 129 14881062 25165824 881 130560 160 36742851 99.808 28006548 997 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 08:34:31] CVMFS is ok
[2026-03-13 08:34:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 08:34:31] Checking for apptainer binary...
[2026-03-13 08:34:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 08:34:31] Running /usr/bin/apptainer --version
[2026-03-13 08:34:31] apptainer version 1.3.2-1.el7
[2026-03-13 08:34:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 08:34:43] cg-vwn358.simple-grid.lan
[2026-03-13 08:34:43] apptainer works
[2026-03-13 08:34:43] Set ATHENA_PROC_NUMBER=8
[2026-03-13 08:34:43] Set ATHENA_CORE_NUMBER=8
[2026-03-13 08:34:44] Starting ATLAS job with PandaID=7051882143
[2026-03-13 08:34:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 14:12:57]  *** The last 200 lines of the pilot log: ***
[2026-03-13 14:12:57] 2026-03-13 13:11:54,883 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 14:12:57] 2026-03-13 13:11:54,883 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 14:12:57] 2026-03-13 13:11:54,883 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 14:12:57] 2026-03-13 13:11:54,889 | INFO     | fitting pss+swap vs Time
[2026-03-13 14:12:57] 2026-03-13 13:11:54,890 | INFO     | sum of square deviations: 10256266720.0
[2026-03-13 14:12:57] 2026-03-13 13:11:54,893 | INFO     | sum of deviations: 143442607393.9999
[2026-03-13 14:12:57] 2026-03-13 13:11:54,894 | INFO     | mean x: 1773397734.0
[2026-03-13 14:12:57] 2026-03-13 13:11:54,894 | INFO     | mean y: 2444474.971962617
[2026-03-13 14:12:57] 2026-03-13 13:11:54,894 | INFO     | intersect: -24800030134.577885
[2026-03-13 14:12:57] 2026-03-13 13:11:54,894 | INFO     | chi2: 7.587243755790104
[2026-03-13 14:12:57] 2026-03-13 13:11:54,895 | INFO     | sum of square deviations: 9784425315.0
[2026-03-13 14:12:57] 2026-03-13 13:11:54,927 | INFO     | sum of deviations: 161896811825.5
[2026-03-13 14:12:57] 2026-03-13 13:11:54,927 | INFO     | mean x: 1773397581.5
[2026-03-13 14:12:57] 2026-03-13 13:11:54,927 | INFO     | mean y: 2450353.110759494
[2026-03-13 14:12:57] 2026-03-13 13:11:54,927 | INFO     | intersect: -29340858558.834496
[2026-03-13 14:12:57] 2026-03-13 13:11:54,928 | INFO     | chi2: 6.864080900389429
[2026-03-13 14:12:57] 2026-03-13 13:11:54,928 | INFO     | current chi2=6.864080900389429 (change=9.531298567398773 %)
[2026-03-13 14:12:57] 2026-03-13 13:11:54,928 | INFO     | right removable region: 315
[2026-03-13 14:12:57] 2026-03-13 13:11:54,929 | INFO     | sum of square deviations: 9784425315.0
[2026-03-13 14:12:57] 2026-03-13 13:11:54,932 | INFO     | sum of deviations: 32860239724.49997
[2026-03-13 14:12:57] 2026-03-13 13:11:54,932 | INFO     | mean x: 1773397886.5
[2026-03-13 14:12:57] 2026-03-13 13:11:54,932 | INFO     | mean y: 2480193.344936709
[2026-03-13 14:12:57] 2026-03-13 13:11:54,932 | INFO     | intersect: -5953340184.574887
[2026-03-13 14:12:57] 2026-03-13 13:11:54,933 | INFO     | chi2: 2.884528185979018
[2026-03-13 14:12:57] 2026-03-13 13:11:54,933 | INFO     | current chi2=2.884528185979018 (change=61.9818701122166 %)
[2026-03-13 14:12:57] 2026-03-13 13:11:54,934 | INFO     | sum of square deviations: 9327281860.0
[2026-03-13 14:12:57] 2026-03-13 13:11:54,937 | INFO     | sum of deviations: -36525821499.0
[2026-03-13 14:12:57] 2026-03-13 13:11:54,937 | INFO     | mean x: 1773398039.0
[2026-03-13 14:12:57] 2026-03-13 13:11:54,937 | INFO     | mean y: 2503272.035369775
[2026-03-13 14:12:57] 2026-03-13 13:11:54,937 | INFO     | intersect: 6947165306.639162
[2026-03-13 14:12:57] 2026-03-13 13:11:54,937 | INFO     | chi2: 0.9290712693030805
[2026-03-13 14:12:57] 2026-03-13 13:11:54,938 | INFO     | current chi2=0.9290712693030805 (change=67.7912223628437 %)
[2026-03-13 14:12:57] 2026-03-13 13:11:54,938 | INFO     | sum of square deviations: 8884603792.5
[2026-03-13 14:12:57] 2026-03-13 13:11:54,941 | INFO     | sum of deviations: -40938068649.500015
[2026-03-13 14:12:57] 2026-03-13 13:11:54,941 | INFO     | mean x: 1773398191.5
[2026-03-13 14:12:57] 2026-03-13 13:11:54,941 | INFO     | mean y: 2504768.6830065357
[2026-03-13 14:12:57] 2026-03-13 13:11:54,942 | INFO     | intersect: 8173887376.403966
[2026-03-13 14:12:57] 2026-03-13 13:11:54,942 | INFO     | chi2: 0.8953265345445125
[2026-03-13 14:12:57] 2026-03-13 13:11:54,942 | INFO     | current chi2=0.8953265345445125 (change=3.6320932390774234 %)
[2026-03-13 14:12:57] 2026-03-13 13:11:54,942 | INFO     | left removable region: 30
[2026-03-13 14:12:57] 2026-03-13 13:11:54,943 | INFO     | sum of square deviations: 7178069470.0
[2026-03-13 14:12:57] 2026-03-13 13:11:54,946 | INFO     | sum of deviations: 7505770619.999998
[2026-03-13 14:12:57] 2026-03-13 13:11:54,946 | INFO     | mean x: 1773398466.0
[2026-03-13 14:12:57] 2026-03-13 13:11:54,946 | INFO     | mean y: 2501235.5368421054
[2026-03-13 14:12:57] 2026-03-13 13:11:54,946 | INFO     | intersect: -1851858374.562594
[2026-03-13 14:12:57] 2026-03-13 13:11:54,947 | INFO     | chi2: 0.001339920915991682
[2026-03-13 14:12:57] 2026-03-13 13:11:54,947 | INFO     | current memory leak: 1.05 B/s (using 285 data points, chi2=0.00)
[2026-03-13 14:12:57] 2026-03-13 13:11:54,948 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-13 14:12:57] 2026-03-13 13:11:54,948 | INFO     | ..............................
[2026-03-13 14:12:57] 2026-03-13 13:11:54,948 | INFO     | . Timing measurements:
[2026-03-13 14:12:57] 2026-03-13 13:11:54,948 | INFO     | . get job = 0 s
[2026-03-13 14:12:57] 2026-03-13 13:11:54,948 | INFO     | . initial setup = 120 s
[2026-03-13 14:12:57] 2026-03-13 13:11:54,949 | INFO     | . payload setup = 149 s
[2026-03-13 14:12:57] 2026-03-13 13:11:54,949 | INFO     | . stage-in = 0 s
[2026-03-13 14:12:57] 2026-03-13 13:11:54,949 | INFO     | . payload execution = 19667 s
[2026-03-13 14:12:57] 2026-03-13 13:11:54,949 | INFO     | . stage-out = 4 s
[2026-03-13 14:12:57] 2026-03-13 13:11:54,949 | INFO     | . log creation = 1 s
[2026-03-13 14:12:57] 2026-03-13 13:11:54,949 | INFO     | ..............................
[2026-03-13 14:12:57] 2026-03-13 13:11:55,019 | INFO     | number of running child processes to parent process 12092: 1
[2026-03-13 14:12:57] 2026-03-13 13:11:55,019 | INFO     | maximum number of monitored processes: 8
[2026-03-13 14:12:57] 2026-03-13 13:11:55,019 | INFO     | aborting job monitoring since job object (job id=7051882143) has expired
[2026-03-13 14:12:57] 2026-03-13 13:11:55,075 | INFO     | 
[2026-03-13 14:12:57] 2026-03-13 13:11:55,076 | INFO     | job summary report
[2026-03-13 14:12:57] 2026-03-13 13:11:55,076 | INFO     | --------------------------------------------------
[2026-03-13 14:12:57] 2026-03-13 13:11:55,076 | INFO     | PanDA job id: 7051882143
[2026-03-13 14:12:57] 2026-03-13 13:11:55,076 | INFO     | task id: 48967094
[2026-03-13 14:12:57] 2026-03-13 13:11:55,076 | INFO     | errors: (none)
[2026-03-13 14:12:57] 2026-03-13 13:11:55,076 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 14:12:57] 2026-03-13 13:11:55,077 | INFO     | pilot state: finished 
[2026-03-13 14:12:57] 2026-03-13 13:11:55,077 | INFO     | transexitcode: 0
[2026-03-13 14:12:57] 2026-03-13 13:11:55,077 | INFO     | exeerrorcode: 0
[2026-03-13 14:12:57] 2026-03-13 13:11:55,077 | INFO     | exeerrordiag: 
[2026-03-13 14:12:57] 2026-03-13 13:11:55,077 | INFO     | exitcode: 0
[2026-03-13 14:12:57] 2026-03-13 13:11:55,077 | INFO     | exitmsg: OK
[2026-03-13 14:12:57] 2026-03-13 13:11:55,077 | INFO     | cpuconsumptiontime: 72483 s
[2026-03-13 14:12:57] 2026-03-13 13:11:55,077 | INFO     | nevents: 400
[2026-03-13 14:12:57] 2026-03-13 13:11:55,078 | INFO     | neventsw: 0
[2026-03-13 14:12:57] 2026-03-13 13:11:55,078 | INFO     | pid: 12092
[2026-03-13 14:12:57] 2026-03-13 13:11:55,078 | INFO     | pgrp: 12092
[2026-03-13 14:12:57] 2026-03-13 13:11:55,078 | INFO     | corecount: 8
[2026-03-13 14:12:57] 2026-03-13 13:11:55,078 | INFO     | event service: False
[2026-03-13 14:12:57] 2026-03-13 13:11:55,078 | INFO     | sizes: {0: 2279134, 1: 2279819, 2: 2280280, 13: 2280280, 19821: 2313551, 19825: 2322549, 19826: 2322733, 19828: 2322955}
[2026-03-13 14:12:57] 2026-03-13 13:11:55,078 | INFO     | --------------------------------------------------
[2026-03-13 14:12:57] 2026-03-13 13:11:55,078 | INFO     | 
[2026-03-13 14:12:57] 2026-03-13 13:11:55,079 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-13 14:12:57] 2026-03-13 13:11:55,318 | INFO     | time since job start (19841s) is within the limit (345600.0s)
[2026-03-13 14:12:57] 2026-03-13 13:11:55,821 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,821 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,821 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,821 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,823 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 14:12:57] 2026-03-13 13:11:55,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,823 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 14:12:57] 2026-03-13 13:11:55,823 | INFO     | job 7051882143 has completed (purged errors)
[2026-03-13 14:12:57] 2026-03-13 13:11:55,823 | INFO     | overall cleanup function is called
[2026-03-13 14:12:57] 2026-03-13 13:11:56,429 | INFO     | PID=7642 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 14:12:57] 2026-03-13 13:11:56,429 | INFO     | .. there are 2 such processes running
[2026-03-13 14:12:57] 2026-03-13 13:11:56,832 | INFO     | --- collectZombieJob: --- 10, [12092]
[2026-03-13 14:12:57] 2026-03-13 13:11:56,833 | INFO     | zombie collector waiting for pid 12092
[2026-03-13 14:12:57] 2026-03-13 13:11:56,833 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 14:12:57] 2026-03-13 13:11:56,833 | INFO     | collected zombie processes
[2026-03-13 14:12:57] 2026-03-13 13:11:56,833 | INFO     | will attempt to kill all subprocesses of pid=12092
[2026-03-13 14:12:57] 2026-03-13 13:11:56,906 | INFO     | process IDs to be killed: [12092] (in reverse order)
[2026-03-13 14:12:57] 2026-03-13 13:11:57,482 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 14:12:57] 2026-03-13 13:11:57,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 14:12:57] 2026-03-13 13:11:57,484 | INFO     | did not find any defunct processes belonging to 12092
[2026-03-13 14:12:57] 2026-03-13 13:11:57,486 | INFO     | did not find any defunct processes belonging to 12092
[2026-03-13 14:12:57] 2026-03-13 13:11:57,486 | INFO     | ready for new job
[2026-03-13 14:12:57] 2026-03-13 13:11:57,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 14:12:57] 2026-03-13 13:11:57,489 | INFO     | **************************************
[2026-03-13 14:12:57] 2026-03-13 13:11:57,489 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 14:12:57] 2026-03-13 13:11:57,489 | INFO     | **************************************
[2026-03-13 14:12:57] 2026-03-13 13:11:57,489 | INFO     | 
[2026-03-13 14:12:57] 2026-03-13 13:11:57,489 | INFO     | pilot is running in a VM
[2026-03-13 14:12:57] 2026-03-13 13:11:57,490 | INFO     | architecture information:
[2026-03-13 14:12:57] 2026-03-13 13:11:57,498 | INFO     | executing command: cat /etc/os-release
[2026-03-13 14:12:57] 2026-03-13 13:11:57,701 | INFO     | cat /etc/os-release:
[2026-03-13 14:12:57] NAME="CentOS Linux"
[2026-03-13 14:12:57] VERSION="7 (Core)"
[2026-03-13 14:12:57] ID="centos"
[2026-03-13 14:12:57] ID_LIKE="rhel fedora"
[2026-03-13 14:12:57] VERSION_ID="7"
[2026-03-13 14:12:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 14:12:57] ANSI_COLOR="0;31"
[2026-03-13 14:12:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 14:12:57] HOME_URL="https://www.centos.org/"
[2026-03-13 14:12:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 14:12:57] 
[2026-03-13 14:12:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 14:12:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 14:12:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 14:12:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 14:12:57] 
[2026-03-13 14:12:57] 2026-03-13 13:11:57,701 | INFO     | **************************************
[2026-03-13 14:12:57] 2026-03-13 13:11:58,205 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-13 14:12:57] 2026-03-13 13:11:58,515 | INFO     | sufficient remaining disk space (494519975936 B)
[2026-03-13 14:12:57] 2026-03-13 13:11:58,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 14:12:57] 2026-03-13 13:11:58,516 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 14:12:57] 2026-03-13 13:11:58,516 | INFO     | update_server=False
[2026-03-13 14:12:57] 2026-03-13 13:11:58,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 14:12:57] 2026-03-13 13:11:58,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 14:12:57] 2026-03-13 13:11:58,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 14:12:57] 2026-03-13 13:11:58,536 | INFO     | aborting loop
[2026-03-13 14:12:57] 2026-03-13 13:11:59,088 | INFO     | all job control threads have been joined
[2026-03-13 14:12:57] 2026-03-13 13:11:59,523 | INFO     | [job] retrieve thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:11:59,542 | INFO     | [job] job monitor thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:11:59,554 | INFO     | all data control threads have been joined
[2026-03-13 14:12:57] 2026-03-13 13:11:59,715 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:11:59,719 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:11:59,801 | INFO     | [payload] failed_post thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:11:59,848 | INFO     | all payload control threads have been joined
[2026-03-13 14:12:57] 2026-03-13 13:11:59,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 14:12:57] 2026-03-13 13:12:00,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 14:12:57] 2026-03-13 13:12:00,094 | INFO     | [job] control thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:12:00,104 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:12:00,284 | INFO     | [data] copytool_in thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:12:00,477 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:12:00,523 | INFO     | [data] copytool_out thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:12:00,560 | INFO     | [data] control thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:12:00,607 | INFO     | [payload] validate_post thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:12:00,721 | INFO     | [job] validate thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:12:00,854 | INFO     | [payload] control thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:12:01,096 | INFO     | [job] queue monitor thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:12:03,913 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 14:12:57] 2026-03-13 13:12:28,554 | INFO     | PID=7642 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 14:12:57] 2026-03-13 13:12:28,554 | INFO     | .. there are 2 such processes running
[2026-03-13 14:12:57] 2026-03-13 13:12:28,555 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 14:12:57] 2026-03-13 13:12:28,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 14:12:57] 2026-03-13 13:12:28,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 14:12:57] 2026-03-13 13:12:48,119 | INFO     | [monitor] cgroup control has ended
[2026-03-13 14:12:57] 2026-03-13 13:12:49,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018041673536)>', '<ExcThread(monitor, started 140017460565760)>']
[2026-03-13 14:12:57] 2026-03-13 13:12:50,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 14:12:57] 2026-03-13 13:12:50,689 | INFO     | [monitor] control thread has ended
[2026-03-13 14:12:57] 2026-03-13 13:12:54,974 | INFO     | all workflow threads have been joined
[2026-03-13 14:12:57] 2026-03-13 13:12:54,975 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 14:12:57] 2026-03-13 13:12:54,975 | INFO     | traces error code: 0
[2026-03-13 14:12:57] 2026-03-13 13:12:54,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 14:12:57] 2026-03-13 13:12:55,349 [wrapper] ==== pilot stdout END ====
[2026-03-13 14:12:57] 2026-03-13 13:12:55,398 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 14:12:57] 2026-03-13 13:12:55,416 [wrapper] pilotpid: 7642
[2026-03-13 14:12:57] 2026-03-13 13:12:55,423 [wrapper] Pilot exit status: 0
[2026-03-13 14:12:57] 2026-03-13 13:12:55,522 [wrapper] pandaids: 7051882143
[2026-03-13 14:12:57] 2026-03-13 13:12:55,628 [wrapper] cleanup supervisor_pilot 19864 7643
[2026-03-13 14:12:57] 2026-03-13 13:12:55,693 [wrapper] Test setup, not cleaning
[2026-03-13 14:12:57] 2026-03-13 13:12:55,745 [wrapper] apfmon messages muted
[2026-03-13 14:12:57] 2026-03-13 13:12:55,802 [wrapper] ==== wrapper stdout END ====
[2026-03-13 14:12:57] 2026-03-13 13:12:55,855 [wrapper] ==== wrapper stderr END ====
[2026-03-13 14:12:57]  *** Error codes and diagnostics ***
[2026-03-13 14:12:58]     "exeErrorCode": 0,
[2026-03-13 14:12:58]     "exeErrorDiag": "",
[2026-03-13 14:12:58]     "pilotErrorCode": 0,
[2026-03-13 14:12:58]     "pilotErrorDiag": "",
[2026-03-13 14:12:58]  *** Listing of results directory ***
[2026-03-13 14:12:58] total 425400
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc    585013 Mar 12 16:14 pilot3.tar.gz
[2026-03-13 14:12:58] -rwx------. 1 boinc boinc     36322 Mar 12 16:18 runpilot2-wrapper.sh
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc      5111 Mar 12 16:19 queuedata.json
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc       100 Mar 13 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 14:12:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 08:34 run_atlas
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc       105 Mar 13 08:34 job.xml
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc      6391 Mar 13 08:34 init_data.xml
[2026-03-13 14:12:58] -rw-r--r--. 2 boinc boinc 218740793 Mar 13 08:34 EVNT.48967092._000334.pool.root.1
[2026-03-13 14:12:58] -rw-r--r--. 2 boinc boinc     15845 Mar 13 08:34 start_atlas.sh
[2026-03-13 14:12:58] drwxrwx--x. 2 boinc boinc        68 Mar 13 08:34 shared
[2026-03-13 14:12:58] -rw-r--r--. 2 boinc boinc    597532 Mar 13 08:34 input.tar.gz
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc         0 Mar 13 08:34 boinc_lockfile
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc      2597 Mar 13 08:34 pandaJob.out
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc       415 Mar 13 08:41 workernode_map.json
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc   1006506 Mar 13 08:41 agis_schedconf.cvmfs.json
[2026-03-13 14:12:58] drwx------. 5 boinc boinc      4096 Mar 13 08:41 pilot3
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc 206311012 Mar 13 14:10 HITS.48967094._008204.pool.root.1
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc       531 Mar 13 14:10 boinc_task_state.xml
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc      1012 Mar 13 14:11 memory_monitor_summary.json
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc   1511578 Mar 13 14:11 agis_ddmendpoints.agis.ALL.json
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc    545310 Mar 13 14:11 log.48967094._008204.job.log.tgz.1
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc      6315 Mar 13 14:11 heartbeat.json
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc      8192 Mar 13 14:12 boinc_mmap_file
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc        28 Mar 13 14:12 wrapper_checkpoint.txt
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc        95 Mar 13 14:12 pilot_heartbeat.json
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc      4879 Mar 13 14:12 pilotlog.txt
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc   2770945 Mar 13 14:12 log.48967094._008204.job.log.1
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc       357 Mar 13 14:12 output.list
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc       620 Mar 13 14:12 runtime_log
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc   3338240 Mar 13 14:12 result.tar.gz
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc      8816 Mar 13 14:12 runtime_log.err
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc       655 Mar 13 14:12 dusKDmvywK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTVkLDm4ZgfFo.diag
[2026-03-13 14:12:58] -rw-r--r--. 1 boinc boinc     20807 Mar 13 14:12 stderr.txt
[2026-03-13 14:12:58] HITS file was successfully produced:
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc 206311012 Mar 13 14:10 shared/HITS.pool.root.1
[2026-03-13 14:12:58]  *** Contents of shared directory: ***
[2026-03-13 14:12:58] total 418952
[2026-03-13 14:12:58] -rw-r--r--. 2 boinc boinc 218740793 Mar 13 08:34 ATLAS.root_0
[2026-03-13 14:12:58] -rw-r--r--. 2 boinc boinc     15845 Mar 13 08:34 start_atlas.sh
[2026-03-13 14:12:58] -rw-r--r--. 2 boinc boinc    597532 Mar 13 08:34 input.tar.gz
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc 206311012 Mar 13 14:10 HITS.pool.root.1
[2026-03-13 14:12:58] -rw-------. 1 boinc boinc   3338240 Mar 13 14:12 result.tar.gz
14:12:59 (3739): run_atlas exited; CPU time 72704.476624
14:12:59 (3739): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN