Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:56:06 (227621): wrapper (7.7.26015): starting
11:56:06 (227621): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 11:56:06] Arguments: --nthreads 4
[2026-03-14 11:56:06] Threads: 4
[2026-03-14 11:56:06] Checking for CVMFS
[2026-03-14 11:56:06] No cvmfs_config command found, will try listing directly
[2026-03-14 11:56:06] CVMFS is ok
[2026-03-14 11:56:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 11:56:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 11:56:06] Further information can be found at the LHC@home message board.
[2026-03-14 11:56:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 11:56:06] Checking for apptainer binary...
[2026-03-14 11:56:06] which: no apptainer in ((null))
[2026-03-14 11:56:06] apptainer is not installed, using version from CVMFS
[2026-03-14 11:56:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 11:56:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot224/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-14 11:56:06] apptainer works
[2026-03-14 11:56:06] Set ATHENA_PROC_NUMBER=4
[2026-03-14 11:56:06] Set ATHENA_CORE_NUMBER=4
[2026-03-14 11:56:06] Starting ATLAS job with PandaID=7051938757
[2026-03-14 11:56:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot224/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 13:37:36]  *** The last 200 lines of the pilot log: ***
[2026-03-14 13:37:36]  filetype=log
[2026-03-14 13:37:36]  guid=b3ab7728-2a37-4bf9-bad1-e3b469c4ee9e
[2026-03-14 13:37:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 13:37:36]  is_altstaged=None
[2026-03-14 13:37:36]  is_tar=False
[2026-03-14 13:37:36]  lfn=log.48967085._015701.job.log.tgz.1
[2026-03-14 13:37:36]  mtime=0
[2026-03-14 13:37:36]  protocol_id=None
[2026-03-14 13:37:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 13:37:36]  replicas=None
[2026-03-14 13:37:36]  scope=mc23_13p6TeV
[2026-03-14 13:37:36]  status=None
[2026-03-14 13:37:36]  status_code=0
[2026-03-14 13:37:36]  storage_token=
[2026-03-14 13:37:36]  surl=/var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7051938757/log.48967085._015701.job.log.tgz.1
[2026-03-14 13:37:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/c1/log.48967085._015701.job.log.tgz.1
[2026-03-14 13:37:36]  workdir=None
[2026-03-14 13:37:36] ]
[2026-03-14 13:37:36] 2026-03-14 12:36:33,172 | INFO     | transferring file log.48967085._015701.job.log.tgz.1 from /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7051938757/log.48967085._015701.job.log.tgz.1 to /var/lib/
[2026-03-14 13:37:36] 2026-03-14 12:36:33,172 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7051938757/log.48967085._015701.job.log.tgz.1 /var/lib/boinc/var/slot224/slots/0/
[2026-03-14 13:37:36] 2026-03-14 12:36:33,189 | INFO     | adding to output.list: log.48967085._015701.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/c1/log.48967085._015701.job.log.tg
[2026-03-14 13:37:36] 2026-03-14 12:36:33,189 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 13:37:36] 2026-03-14 12:36:33,189 | INFO     | summary of transferred files:
[2026-03-14 13:37:36] 2026-03-14 12:36:33,190 | INFO     |  -- lfn=log.48967085._015701.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 13:37:36] 2026-03-14 12:36:33,190 | INFO     | stage-out finished correctly
[2026-03-14 13:37:36] 2026-03-14 12:36:34,215 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 13:37:36] 2026-03-14 12:36:34,580 | INFO     | time since job start (6015s) is within the limit (345600.0s)
[2026-03-14 13:37:36] 2026-03-14 12:36:34,933 | INFO     | monitor loop #433: job 0:7051938757 is in state 'finished'
[2026-03-14 13:37:36] 2026-03-14 12:36:34,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 13:37:36] 2026-03-14 12:36:35,130 | INFO     | job 7051938757 has state=finished
[2026-03-14 13:37:36] 2026-03-14 12:36:35,130 | INFO     | preparing for final server update for job 7051938757 in state='finished'
[2026-03-14 13:37:36] 2026-03-14 12:36:35,131 | INFO     | reading metadata from: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7051938757/jobReport.json
[2026-03-14 13:37:36] 2026-03-14 12:36:35,133 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot224/slots/0/workernode_map.json
[2026-03-14 13:37:36] 2026-03-14 12:36:35,133 | INFO     | this job has now completed (state=finished)
[2026-03-14 13:37:36] 2026-03-14 12:36:35,133 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 13:37:36] 2026-03-14 12:36:35,133 | INFO     | log transfer has been attempted: DONE
[2026-03-14 13:37:36] 2026-03-14 12:36:35,133 | INFO     | job 7051938757 has finished - writing final server update
[2026-03-14 13:37:36] 2026-03-14 12:36:35,134 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_675621/.job.ad'
[2026-03-14 13:37:36] 2026-03-14 12:36:35,134 | INFO     | total number of processed events: 400 (read)
[2026-03-14 13:37:36] 2026-03-14 12:36:35,151 | INFO     | using path: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7051938757/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 13:37:36] 2026-03-14 12:36:35,151 | INFO     | extracted standard info from prmon json
[2026-03-14 13:37:36] 2026-03-14 12:36:35,151 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 13:37:36] 2026-03-14 12:36:35,151 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 13:37:36] 2026-03-14 12:36:35,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 13:37:36] 2026-03-14 12:36:35,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 13:37:36] 2026-03-14 12:36:35,153 | INFO     | fitting pss+swap vs Time
[2026-03-14 13:37:36] 2026-03-14 12:36:35,153 | INFO     | sum of square deviations: 241429643.0
[2026-03-14 13:37:36] 2026-03-14 12:36:35,153 | INFO     | sum of deviations: 380246702.50000006
[2026-03-14 13:37:36] 2026-03-14 12:36:35,153 | INFO     | mean x: 1773488881.5
[2026-03-14 13:37:36] 2026-03-14 12:36:35,153 | INFO     | mean y: 2328796.684782609
[2026-03-14 13:37:36] 2026-03-14 12:36:35,153 | INFO     | intersect: -2790879571.3149514
[2026-03-14 13:37:36] 2026-03-14 12:36:35,153 | INFO     | chi2: 0.00046825036095577186
[2026-03-14 13:37:36] 2026-03-14 12:36:35,153 | INFO     | current memory leak: 1.57 B/s (using 92 data points, chi2=0.00)
[2026-03-14 13:37:36] 2026-03-14 12:36:35,153 | INFO     | could have reported an average CPU frequency of 3604 MHz (7 samples)
[2026-03-14 13:37:36] 2026-03-14 12:36:35,154 | INFO     | ..............................
[2026-03-14 13:37:36] 2026-03-14 12:36:35,154 | INFO     | . Timing measurements:
[2026-03-14 13:37:36] 2026-03-14 12:36:35,154 | INFO     | . get job = 0 s
[2026-03-14 13:37:36] 2026-03-14 12:36:35,154 | INFO     | . initial setup = 5 s
[2026-03-14 13:37:36] 2026-03-14 12:36:35,154 | INFO     | . payload setup = 5 s
[2026-03-14 13:37:36] 2026-03-14 12:36:35,154 | INFO     | . stage-in = 0 s
[2026-03-14 13:37:36] 2026-03-14 12:36:35,154 | INFO     | . payload execution = 5992 s
[2026-03-14 13:37:36] 2026-03-14 12:36:35,154 | INFO     | . stage-out = 0 s
[2026-03-14 13:37:36] 2026-03-14 12:36:35,154 | INFO     | . log creation = 0 s
[2026-03-14 13:37:36] 2026-03-14 12:36:35,154 | INFO     | ..............................
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | 
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | job summary report
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | --------------------------------------------------
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | PanDA job id: 7051938757
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | task id: 48967085
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | errors: (none)
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | pilot state: finished 
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | transexitcode: 0
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | exeerrorcode: 0
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | exeerrordiag: 
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | exitcode: 0
[2026-03-14 13:37:36] 2026-03-14 12:36:35,594 | INFO     | exitmsg: OK
[2026-03-14 13:37:36] 2026-03-14 12:36:35,595 | INFO     | cpuconsumptiontime: 23020 s
[2026-03-14 13:37:36] 2026-03-14 12:36:35,595 | INFO     | nevents: 400
[2026-03-14 13:37:36] 2026-03-14 12:36:35,595 | INFO     | neventsw: 0
[2026-03-14 13:37:36] 2026-03-14 12:36:35,595 | INFO     | pid: 272798
[2026-03-14 13:37:36] 2026-03-14 12:36:35,595 | INFO     | pgrp: 272798
[2026-03-14 13:37:36] 2026-03-14 12:36:35,595 | INFO     | corecount: 4
[2026-03-14 13:37:36] 2026-03-14 12:36:35,595 | INFO     | event service: False
[2026-03-14 13:37:36] 2026-03-14 12:36:35,595 | INFO     | sizes: {0: 2280248, 11: 2280248, 6000: 2307062, 6002: 2316084, 6003: 2316140, 6004: 2316334}
[2026-03-14 13:37:36] 2026-03-14 12:36:35,595 | INFO     | --------------------------------------------------
[2026-03-14 13:37:36] 2026-03-14 12:36:35,595 | INFO     | 
[2026-03-14 13:37:36] 2026-03-14 12:36:35,595 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot224/slots/0
[2026-03-14 13:37:36] 2026-03-14 12:36:35,615 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,615 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,615 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,615 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,615 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,615 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,615 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,615 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,615 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,615 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,615 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,616 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,616 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,616 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,616 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 13:37:36] 2026-03-14 12:36:35,616 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,616 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 13:37:36] 2026-03-14 12:36:35,616 | INFO     | job 7051938757 has completed (purged errors)
[2026-03-14 13:37:36] 2026-03-14 12:36:35,616 | INFO     | overall cleanup function is called
[2026-03-14 13:37:36] 2026-03-14 12:36:36,622 | INFO     | --- collectZombieJob: --- 10, [272798]
[2026-03-14 13:37:36] 2026-03-14 12:36:36,622 | INFO     | zombie collector waiting for pid 272798
[2026-03-14 13:37:36] 2026-03-14 12:36:36,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 13:37:36] 2026-03-14 12:36:36,622 | INFO     | collected zombie processes
[2026-03-14 13:37:36] 2026-03-14 12:36:36,622 | INFO     | will attempt to kill all subprocesses of pid=272798
[2026-03-14 13:37:36] 2026-03-14 12:36:37,103 | INFO     | process IDs to be killed: [272798] (in reverse order)
[2026-03-14 13:37:36] 2026-03-14 12:36:37,323 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 13:37:36] 2026-03-14 12:36:37,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 13:37:36] 2026-03-14 12:36:37,355 | INFO     | did not find any defunct processes belonging to 272798
[2026-03-14 13:37:36] 2026-03-14 12:36:37,387 | INFO     | did not find any defunct processes belonging to 272798
[2026-03-14 13:37:36] 2026-03-14 12:36:37,387 | INFO     | ready for new job
[2026-03-14 13:37:36] 2026-03-14 12:36:37,388 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 13:37:36] 2026-03-14 12:36:37,389 | INFO     | **************************************
[2026-03-14 13:37:36] 2026-03-14 12:36:37,389 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 13:37:36] 2026-03-14 12:36:37,389 | INFO     | **************************************
[2026-03-14 13:37:36] 2026-03-14 12:36:37,389 | INFO     | 
[2026-03-14 13:37:36] 2026-03-14 12:36:37,395 | INFO     | architecture information:
[2026-03-14 13:37:36] 2026-03-14 12:36:37,396 | INFO     | executing command: cat /etc/os-release
[2026-03-14 13:37:36] 2026-03-14 12:36:37,411 | INFO     | cat /etc/os-release:
[2026-03-14 13:37:36] NAME="CentOS Linux"
[2026-03-14 13:37:36] VERSION="7 (Core)"
[2026-03-14 13:37:36] ID="centos"
[2026-03-14 13:37:36] ID_LIKE="rhel fedora"
[2026-03-14 13:37:36] VERSION_ID="7"
[2026-03-14 13:37:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 13:37:36] ANSI_COLOR="0;31"
[2026-03-14 13:37:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 13:37:36] HOME_URL="https://www.centos.org/"
[2026-03-14 13:37:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 13:37:36] 
[2026-03-14 13:37:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 13:37:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 13:37:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 13:37:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 13:37:36] 
[2026-03-14 13:37:36] 2026-03-14 12:36:37,411 | INFO     | **************************************
[2026-03-14 13:37:36] 2026-03-14 12:36:37,914 | INFO     | executing command: df -mP /var/lib/boinc/var/slot224/slots/0
[2026-03-14 13:37:36] 2026-03-14 12:36:37,931 | INFO     | sufficient remaining disk space (20604518400 B)
[2026-03-14 13:37:36] 2026-03-14 12:36:37,932 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 13:37:36] 2026-03-14 12:36:37,932 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 13:37:36] 2026-03-14 12:36:37,932 | INFO     | update_server=False
[2026-03-14 13:37:36] 2026-03-14 12:36:37,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 13:37:36] 2026-03-14 12:36:38,049 | INFO     | all data control threads have been joined
[2026-03-14 13:37:36] 2026-03-14 12:36:38,144 | INFO     | all payload control threads have been joined
[2026-03-14 13:37:36] 2026-03-14 12:36:38,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:37:36] 2026-03-14 12:36:38,442 | INFO     | aborting loop
[2026-03-14 13:37:36] 2026-03-14 12:36:38,749 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 13:37:36] 2026-03-14 12:36:38,937 | INFO     | [job] retrieve thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:39,054 | INFO     | [data] control thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:39,091 | INFO     | [payload] validate_post thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:39,149 | INFO     | [payload] control thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:39,152 | INFO     | all job control threads have been joined
[2026-03-14 13:37:36] 2026-03-14 12:36:39,429 | INFO     | [payload] failed_post thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:39,447 | INFO     | [job] job monitor thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:39,636 | INFO     | [job] validate thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:39,966 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:39,971 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:39,984 | INFO     | [data] copytool_in thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:40,148 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:40,157 | INFO     | [job] control thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:40,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:37:36] 2026-03-14 12:36:40,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 13:37:36] 2026-03-14 12:36:40,754 | INFO     | [data] copytool_out thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:41,213 | INFO     | [job] queue monitor thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:44,277 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:36:48,361 | INFO     | job.realtimelogging is not enabled
[2026-03-14 13:37:36] 2026-03-14 12:36:49,366 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 13:37:36] 2026-03-14 12:37:08,233 | INFO     | PID=240271 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 13:37:36] 2026-03-14 12:37:08,233 | INFO     | .. there are 47 such processes running
[2026-03-14 13:37:36] 2026-03-14 12:37:08,234 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 13:37:36] 2026-03-14 12:37:08,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 13:37:36] 2026-03-14 12:37:08,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 13:37:36] 2026-03-14 12:37:29,370 | INFO     | [monitor] cgroup control has ended
[2026-03-14 13:37:36] 2026-03-14 12:37:31,431 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22590364903232)>', '<ExcThread(monitor, started 22590126307072)>']
[2026-03-14 13:37:36] 2026-03-14 12:37:32,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 13:37:36] 2026-03-14 12:37:32,354 | INFO     | [monitor] control thread has ended
[2026-03-14 13:37:36] 2026-03-14 12:37:36,456 | INFO     | all workflow threads have been joined
[2026-03-14 13:37:36] 2026-03-14 12:37:36,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 13:37:36] 2026-03-14 12:37:36,456 | INFO     | traces error code: 0
[2026-03-14 13:37:36] 2026-03-14 12:37:36,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 13:37:36] 2026-03-14 12:37:36,575 [wrapper] ==== pilot stdout END ====
[2026-03-14 13:37:36] 2026-03-14 12:37:36,578 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 13:37:36] 2026-03-14 12:37:36,580 [wrapper] pilotpid: 240271
[2026-03-14 13:37:36] 2026-03-14 12:37:36,581 [wrapper] Pilot exit status: 0
[2026-03-14 13:37:36] 2026-03-14 12:37:36,590 [wrapper] pandaids: 7051938757
[2026-03-14 13:37:36] 2026-03-14 12:37:36,711 [wrapper] cleanup supervisor_pilot 1039982 240272
[2026-03-14 13:37:36] 2026-03-14 12:37:36,714 [wrapper] Test setup, not cleaning
[2026-03-14 13:37:36] 2026-03-14 12:37:36,717 [wrapper] apfmon messages muted
[2026-03-14 13:37:36] 2026-03-14 12:37:36,719 [wrapper] ==== wrapper stdout END ====
[2026-03-14 13:37:36] 2026-03-14 12:37:36,722 [wrapper] ==== wrapper stderr END ====
[2026-03-14 13:37:36]  *** Error codes and diagnostics ***
[2026-03-14 13:37:36]     "exeErrorCode": 0,
[2026-03-14 13:37:36]     "exeErrorDiag": "",
[2026-03-14 13:37:36]     "pilotErrorCode": 0,
[2026-03-14 13:37:36]     "pilotErrorDiag": "",
[2026-03-14 13:37:36]  *** Listing of results directory ***
[2026-03-14 13:37:36] total 407504
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc      5111 Mar 12 17:09 queuedata.json
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc    585013 Mar 12 17:09 pilot3.tar.gz
[2026-03-14 13:37:36] -rwx------. 1 boinc boinc     36322 Mar 12 17:09 runpilot2-wrapper.sh
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc       100 Mar 14 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 13:37:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 11:56 run_atlas
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc       105 Mar 14 11:56 job.xml
[2026-03-14 13:37:36] -rw-r--r--. 2 boinc boinc 213360098 Mar 14 11:56 EVNT.48967083._000634.pool.root.1
[2026-03-14 13:37:36] -rw-r--r--. 2 boinc boinc     15845 Mar 14 11:56 start_atlas.sh
[2026-03-14 13:37:36] drwxrwx--x. 2 boinc boinc      4096 Mar 14 11:56 shared
[2026-03-14 13:37:36] -rw-r--r--. 2 boinc boinc    597516 Mar 14 11:56 input.tar.gz
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc      6708 Mar 14 11:56 init_data.xml
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc         0 Mar 14 11:56 boinc_lockfile
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc      2560 Mar 14 11:56 pandaJob.out
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc   1004579 Mar 14 11:56 agis_schedconf.cvmfs.json
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc   1511579 Mar 14 11:56 agis_ddmendpoints.agis.ALL.json
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc       444 Mar 14 11:56 workernode_map.json
[2026-03-14 13:37:36] drwx------. 5 boinc boinc      4096 Mar 14 11:56 pilot3
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc 197725264 Mar 14 13:36 HITS.48967085._015701.pool.root.1
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc      1031 Mar 14 13:36 memory_monitor_summary.json
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc       529 Mar 14 13:36 boinc_task_state.xml
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc    268079 Mar 14 13:36 log.48967085._015701.job.log.tgz.1
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc      6352 Mar 14 13:36 heartbeat.json
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc        95 Mar 14 13:37 pilot_heartbeat.json
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc      8192 Mar 14 13:37 boinc_mmap_file
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc        27 Mar 14 13:37 wrapper_checkpoint.txt
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc      4901 Mar 14 13:37 pilotlog.txt
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc    865246 Mar 14 13:37 log.48967085._015701.job.log.1
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc       357 Mar 14 13:37 output.list
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc       620 Mar 14 13:37 runtime_log
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc   1146880 Mar 14 13:37 result.tar.gz
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc      9221 Mar 14 13:37 runtime_log.err
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc       663 Mar 14 13:37 A8mMDmrmxK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5BnLDmhua56n.diag
[2026-03-14 13:37:36] -rw-r--r--. 1 boinc boinc     21144 Mar 14 13:37 stderr.txt
[2026-03-14 13:37:36] HITS file was successfully produced:
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc 197725264 Mar 14 13:36 shared/HITS.pool.root.1
[2026-03-14 13:37:36]  *** Contents of shared directory: ***
[2026-03-14 13:37:36] total 403180
[2026-03-14 13:37:36] -rw-r--r--. 2 boinc boinc 213360098 Mar 14 11:56 ATLAS.root_0
[2026-03-14 13:37:36] -rw-r--r--. 2 boinc boinc     15845 Mar 14 11:56 start_atlas.sh
[2026-03-14 13:37:36] -rw-r--r--. 2 boinc boinc    597516 Mar 14 11:56 input.tar.gz
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc 197725264 Mar 14 13:36 HITS.pool.root.1
[2026-03-14 13:37:36] -rw-------. 1 boinc boinc   1146880 Mar 14 13:37 result.tar.gz
13:37:38 (227621): run_atlas exited; CPU time 23307.160063
13:37:38 (227621): called boinc_finish(0)

</stderr_txt>
]]>

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