Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:59:47 (1963): wrapper (7.7.26015): starting
05:59:47 (1963): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 05:59:47] Arguments: --nthreads 8
[2026-03-13 05:59:47] Threads: 8
[2026-03-13 05:59:47] Checking for CVMFS
[2026-03-13 05:59:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 05:59:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 05:59:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 05:59:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 05:59:51] 2.11.2.0 14173 125686 138704 157227 3 54 16181476 25165824 4784 130560 160 39729072 99.819 27394996 982 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 05:59:51] CVMFS is ok
[2026-03-13 05:59:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 05:59:51] Checking for apptainer binary...
[2026-03-13 05:59:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 05:59:51] Running /usr/bin/apptainer --version
[2026-03-13 05:59:51] apptainer version 1.3.2-1.el7
[2026-03-13 05:59:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 06:00:02] cg-vwn375.simple-grid.lan
[2026-03-13 06:00:02] apptainer works
[2026-03-13 06:00:02] Set ATHENA_PROC_NUMBER=8
[2026-03-13 06:00:02] Set ATHENA_CORE_NUMBER=8
[2026-03-13 06:00:03] Starting ATLAS job with PandaID=7051901975
[2026-03-13 06:00:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 10:42:37]  *** The last 200 lines of the pilot log: ***
[2026-03-13 10:42:37] 2026-03-13 09:41:53,770 | INFO     | total number of processed events: 400 (read)
[2026-03-13 10:42:37] 2026-03-13 09:41:53,772 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7051901975/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 10:42:37] 2026-03-13 09:41:53,773 | INFO     | extracted standard info from prmon json
[2026-03-13 10:42:37] 2026-03-13 09:41:53,773 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 10:42:37] 2026-03-13 09:41:53,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 10:42:37] 2026-03-13 09:41:53,773 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 10:42:37] 2026-03-13 09:41:53,773 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 10:42:37] 2026-03-13 09:41:53,779 | INFO     | fitting pss+swap vs Time
[2026-03-13 10:42:37] 2026-03-13 09:41:53,780 | INFO     | sum of square deviations: 5968658887.0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,786 | INFO     | sum of deviations: 87575164962.00003
[2026-03-13 10:42:37] 2026-03-13 09:41:53,787 | INFO     | mean x: 1773386723.5
[2026-03-13 10:42:37] 2026-03-13 09:41:53,787 | INFO     | mean y: 2472280.582089552
[2026-03-13 10:42:37] 2026-03-13 09:41:53,787 | INFO     | intersect: -26017549602.423073
[2026-03-13 10:42:37] 2026-03-13 09:41:53,787 | INFO     | chi2: 7.51372298162949
[2026-03-13 10:42:37] 2026-03-13 09:41:53,788 | INFO     | sum of square deviations: 5640782972.0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,790 | INFO     | sum of deviations: 103898228222.99992
[2026-03-13 10:42:37] 2026-03-13 09:41:53,791 | INFO     | mean x: 1773386571.0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,791 | INFO     | mean y: 2479746.885931559
[2026-03-13 10:42:37] 2026-03-13 09:41:53,791 | INFO     | intersect: -32661730806.145294
[2026-03-13 10:42:37] 2026-03-13 09:41:53,791 | INFO     | chi2: 6.8025891673936245
[2026-03-13 10:42:37] 2026-03-13 09:41:53,792 | INFO     | current chi2=6.8025891673936245 (change=9.464466762675926 %)
[2026-03-13 10:42:37] 2026-03-13 09:41:53,792 | INFO     | right removable region: 262
[2026-03-13 10:42:37] 2026-03-13 09:41:53,792 | INFO     | sum of square deviations: 5640782972.0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,795 | INFO     | sum of deviations: -5947685684.000004
[2026-03-13 10:42:37] 2026-03-13 09:41:53,795 | INFO     | mean x: 1773386876.0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,795 | INFO     | mean y: 2515750.6311787074
[2026-03-13 10:42:37] 2026-03-13 09:41:53,795 | INFO     | intersect: 1872388742.8975244
[2026-03-13 10:42:37] 2026-03-13 09:41:53,796 | INFO     | chi2: 2.72055946608927
[2026-03-13 10:42:37] 2026-03-13 09:41:53,796 | INFO     | current chi2=2.72055946608927 (change=63.792124453605204 %)
[2026-03-13 10:42:37] 2026-03-13 09:41:53,796 | INFO     | sum of square deviations: 5325139844.5
[2026-03-13 10:42:37] 2026-03-13 09:41:53,799 | INFO     | sum of deviations: -58634934413.0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,799 | INFO     | mean x: 1773387028.5
[2026-03-13 10:42:37] 2026-03-13 09:41:53,799 | INFO     | mean y: 2541083.1317829457
[2026-03-13 10:42:37] 2026-03-13 09:41:53,799 | INFO     | intersect: 19529245571.908604
[2026-03-13 10:42:37] 2026-03-13 09:41:53,799 | INFO     | chi2: 0.9605305116226859
[2026-03-13 10:42:37] 2026-03-13 09:41:53,800 | INFO     | current chi2=0.9605305116226859 (change=64.69364027526947 %)
[2026-03-13 10:42:37] 2026-03-13 09:41:53,800 | INFO     | sum of square deviations: 5021496942.0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,802 | INFO     | sum of deviations: -65788533550.0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,802 | INFO     | mean x: 1773387181.0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,803 | INFO     | mean y: 2544651.9249011856
[2026-03-13 10:42:37] 2026-03-13 09:41:53,803 | INFO     | intersect: 23236361858.61044
[2026-03-13 10:42:37] 2026-03-13 09:41:53,803 | INFO     | chi2: 0.8985077292071706
[2026-03-13 10:42:37] 2026-03-13 09:41:53,803 | INFO     | current chi2=0.8985077292071706 (change=6.457138181975732 %)
[2026-03-13 10:42:37] 2026-03-13 09:41:53,804 | INFO     | left removable region: 30
[2026-03-13 10:42:37] 2026-03-13 09:41:53,804 | INFO     | sum of square deviations: 3871990738.0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,820 | INFO     | monitor loop #1252: job 0:7051901975 is in state 'finished'
[2026-03-13 10:42:37] 2026-03-13 09:41:53,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-13 10:42:37] 2026-03-13 09:41:53,821 | INFO     | sum of deviations: -34641640414.50001
[2026-03-13 10:42:37] 2026-03-13 09:41:53,821 | INFO     | mean x: 1773387455.5
[2026-03-13 10:42:37] 2026-03-13 09:41:53,821 | INFO     | mean y: 2546830.349137931
[2026-03-13 10:42:37] 2026-03-13 09:41:53,821 | INFO     | intersect: 15868558581.38658
[2026-03-13 10:42:37] 2026-03-13 09:41:53,822 | INFO     | chi2: 0.10404427541386727
[2026-03-13 10:42:37] 2026-03-13 09:41:53,822 | INFO     | current memory leak: -8.95 B/s (using 232 data points, chi2=0.10)
[2026-03-13 10:42:37] 2026-03-13 09:41:53,822 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-13 10:42:37] 2026-03-13 09:41:53,823 | INFO     | ..............................
[2026-03-13 10:42:37] 2026-03-13 09:41:53,823 | INFO     | . Timing measurements:
[2026-03-13 10:42:37] 2026-03-13 09:41:53,823 | INFO     | . get job = 0 s
[2026-03-13 10:42:37] 2026-03-13 09:41:53,823 | INFO     | . initial setup = 101 s
[2026-03-13 10:42:37] 2026-03-13 09:41:53,823 | INFO     | . payload setup = 142 s
[2026-03-13 10:42:37] 2026-03-13 09:41:53,823 | INFO     | . stage-in = 0 s
[2026-03-13 10:42:37] 2026-03-13 09:41:53,823 | INFO     | . payload execution = 16444 s
[2026-03-13 10:42:37] 2026-03-13 09:41:53,823 | INFO     | . stage-out = 3 s
[2026-03-13 10:42:37] 2026-03-13 09:41:53,823 | INFO     | . log creation = 1 s
[2026-03-13 10:42:37] 2026-03-13 09:41:53,824 | INFO     | ..............................
[2026-03-13 10:42:37] 2026-03-13 09:41:53,962 | INFO     | 
[2026-03-13 10:42:37] 2026-03-13 09:41:53,962 | INFO     | job summary report
[2026-03-13 10:42:37] 2026-03-13 09:41:53,962 | INFO     | --------------------------------------------------
[2026-03-13 10:42:37] 2026-03-13 09:41:53,962 | INFO     | PanDA job id: 7051901975
[2026-03-13 10:42:37] 2026-03-13 09:41:53,965 | INFO     | task id: 48996069
[2026-03-13 10:42:37] 2026-03-13 09:41:53,965 | INFO     | errors: (none)
[2026-03-13 10:42:37] 2026-03-13 09:41:53,965 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 10:42:37] 2026-03-13 09:41:53,965 | INFO     | pilot state: finished 
[2026-03-13 10:42:37] 2026-03-13 09:41:53,965 | INFO     | transexitcode: 0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,965 | INFO     | exeerrorcode: 0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,965 | INFO     | exeerrordiag: 
[2026-03-13 10:42:37] 2026-03-13 09:41:53,965 | INFO     | exitcode: 0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,965 | INFO     | exitmsg: OK
[2026-03-13 10:42:37] 2026-03-13 09:41:53,965 | INFO     | cpuconsumptiontime: 63310 s
[2026-03-13 10:42:37] 2026-03-13 09:41:53,966 | INFO     | nevents: 400
[2026-03-13 10:42:37] 2026-03-13 09:41:53,966 | INFO     | neventsw: 0
[2026-03-13 10:42:37] 2026-03-13 09:41:53,966 | INFO     | pid: 10581
[2026-03-13 10:42:37] 2026-03-13 09:41:53,966 | INFO     | pgrp: 10581
[2026-03-13 10:42:37] 2026-03-13 09:41:53,966 | INFO     | corecount: 8
[2026-03-13 10:42:37] 2026-03-13 09:41:53,966 | INFO     | event service: False
[2026-03-13 10:42:37] 2026-03-13 09:41:53,966 | INFO     | sizes: {0: 2279608, 1: 2280065, 2: 2280153, 12: 2280153, 16591: 2311645, 16592: 2311644, 16596: 2320826, 16597: 2320882, 16601: 2321076}
[2026-03-13 10:42:37] 2026-03-13 09:41:53,966 | INFO     | --------------------------------------------------
[2026-03-13 10:42:37] 2026-03-13 09:41:53,966 | INFO     | 
[2026-03-13 10:42:37] 2026-03-13 09:41:53,967 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-13 10:42:37] 2026-03-13 09:41:54,316 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,317 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,317 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,317 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,317 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,317 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,317 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,318 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 10:42:37] 2026-03-13 09:41:54,319 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,319 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 10:42:37] 2026-03-13 09:41:54,319 | INFO     | job 7051901975 has completed (purged errors)
[2026-03-13 10:42:37] 2026-03-13 09:41:54,319 | INFO     | overall cleanup function is called
[2026-03-13 10:42:37] 2026-03-13 09:41:55,331 | INFO     | --- collectZombieJob: --- 10, [10581]
[2026-03-13 10:42:37] 2026-03-13 09:41:55,331 | INFO     | zombie collector waiting for pid 10581
[2026-03-13 10:42:37] 2026-03-13 09:41:55,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 10:42:37] 2026-03-13 09:41:55,331 | INFO     | collected zombie processes
[2026-03-13 10:42:37] 2026-03-13 09:41:55,331 | INFO     | will attempt to kill all subprocesses of pid=10581
[2026-03-13 10:42:37] 2026-03-13 09:41:55,450 | INFO     | process IDs to be killed: [10581] (in reverse order)
[2026-03-13 10:42:37] 2026-03-13 09:41:55,925 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 10:42:37] 2026-03-13 09:41:55,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 10:42:37] 2026-03-13 09:41:55,929 | INFO     | did not find any defunct processes belonging to 10581
[2026-03-13 10:42:37] 2026-03-13 09:41:55,931 | INFO     | did not find any defunct processes belonging to 10581
[2026-03-13 10:42:37] 2026-03-13 09:41:55,931 | INFO     | ready for new job
[2026-03-13 10:42:37] 2026-03-13 09:41:55,932 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 10:42:37] 2026-03-13 09:41:55,934 | INFO     | **************************************
[2026-03-13 10:42:37] 2026-03-13 09:41:55,934 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 10:42:37] 2026-03-13 09:41:55,934 | INFO     | **************************************
[2026-03-13 10:42:37] 2026-03-13 09:41:55,934 | INFO     | 
[2026-03-13 10:42:37] 2026-03-13 09:41:55,935 | INFO     | pilot is running in a VM
[2026-03-13 10:42:37] 2026-03-13 09:41:55,935 | INFO     | architecture information:
[2026-03-13 10:42:37] 2026-03-13 09:41:55,939 | INFO     | executing command: cat /etc/os-release
[2026-03-13 10:42:37] 2026-03-13 09:41:56,158 | INFO     | cat /etc/os-release:
[2026-03-13 10:42:37] NAME="CentOS Linux"
[2026-03-13 10:42:37] VERSION="7 (Core)"
[2026-03-13 10:42:37] ID="centos"
[2026-03-13 10:42:37] ID_LIKE="rhel fedora"
[2026-03-13 10:42:37] VERSION_ID="7"
[2026-03-13 10:42:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 10:42:37] ANSI_COLOR="0;31"
[2026-03-13 10:42:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 10:42:37] HOME_URL="https://www.centos.org/"
[2026-03-13 10:42:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 10:42:37] 
[2026-03-13 10:42:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 10:42:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 10:42:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 10:42:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 10:42:37] 
[2026-03-13 10:42:37] 2026-03-13 09:41:56,158 | INFO     | **************************************
[2026-03-13 10:42:37] 2026-03-13 09:41:56,662 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-13 10:42:37] 2026-03-13 09:41:56,909 | INFO     | sufficient remaining disk space (494352203776 B)
[2026-03-13 10:42:37] 2026-03-13 09:41:56,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 10:42:37] 2026-03-13 09:41:56,910 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 10:42:37] 2026-03-13 09:41:56,910 | INFO     | update_server=False
[2026-03-13 10:42:37] 2026-03-13 09:41:56,910 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 10:42:37] 2026-03-13 09:41:56,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 10:42:37] 2026-03-13 09:41:56,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 10:42:37] 2026-03-13 09:41:56,978 | INFO     | all payload control threads have been joined
[2026-03-13 10:42:37] 2026-03-13 09:41:57,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 10:42:37] 2026-03-13 09:41:57,332 | INFO     | aborting loop
[2026-03-13 10:42:37] 2026-03-13 09:41:57,586 | INFO     | all data control threads have been joined
[2026-03-13 10:42:37] 2026-03-13 09:41:57,917 | INFO     | [job] retrieve thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:57,984 | INFO     | [payload] control thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:58,178 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:58,338 | INFO     | [job] job monitor thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:58,419 | INFO     | all job control threads have been joined
[2026-03-13 10:42:37] 2026-03-13 09:41:58,592 | INFO     | [data] control thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:58,775 | INFO     | [payload] validate_post thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:58,904 | INFO     | [payload] failed_post thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:58,919 | INFO     | [data] copytool_out thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:58,930 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:58,971 | INFO     | [job] validate thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:58,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 10:42:37] 2026-03-13 09:41:59,066 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:59,228 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:59,358 | INFO     | [data] copytool_in thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:59,425 | INFO     | [job] control thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:41:59,984 | INFO     | [job] queue monitor thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:42:00,921 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 10:42:37] 2026-03-13 09:42:25,787 | INFO     | PID=6065 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 10:42:37] 2026-03-13 09:42:25,788 | INFO     | .. there are 9 such processes running
[2026-03-13 10:42:37] 2026-03-13 09:42:25,788 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 10:42:37] 2026-03-13 09:42:25,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 10:42:37] 2026-03-13 09:42:25,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 10:42:37] 2026-03-13 09:42:28,692 | INFO     | [monitor] cgroup control has ended
[2026-03-13 10:42:37] 2026-03-13 09:42:28,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692871472960)>', '<ExcThread(monitor, started 140692055652096)>']
[2026-03-13 10:42:37] 2026-03-13 09:42:28,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 10:42:37] 2026-03-13 09:42:28,806 | INFO     | [monitor] control thread has ended
[2026-03-13 10:42:37] 2026-03-13 09:42:33,823 | INFO     | all workflow threads have been joined
[2026-03-13 10:42:37] 2026-03-13 09:42:33,823 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 10:42:37] 2026-03-13 09:42:33,823 | INFO     | traces error code: 0
[2026-03-13 10:42:37] 2026-03-13 09:42:33,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 10:42:37] 2026-03-13 09:42:34,150 [wrapper] ==== pilot stdout END ====
[2026-03-13 10:42:37] 2026-03-13 09:42:34,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 10:42:37] 2026-03-13 09:42:34,330 [wrapper] pilotpid: 6065
[2026-03-13 10:42:37] 2026-03-13 09:42:34,421 [wrapper] Pilot exit status: 0
[2026-03-13 10:42:37] 2026-03-13 09:42:34,767 [wrapper] pandaids: 7051901975
[2026-03-13 10:42:37] 2026-03-13 09:42:35,263 [wrapper] cleanup supervisor_pilot 19301 6066
[2026-03-13 10:42:37] 2026-03-13 09:42:35,338 [wrapper] Test setup, not cleaning
[2026-03-13 10:42:37] 2026-03-13 09:42:35,395 [wrapper] apfmon messages muted
[2026-03-13 10:42:37] 2026-03-13 09:42:35,453 [wrapper] ==== wrapper stdout END ====
[2026-03-13 10:42:37] 2026-03-13 09:42:35,526 [wrapper] ==== wrapper stderr END ====
[2026-03-13 10:42:37]  *** Error codes and diagnostics ***
[2026-03-13 10:42:37]     "exeErrorCode": 0,
[2026-03-13 10:42:37]     "exeErrorDiag": "",
[2026-03-13 10:42:37]     "pilotErrorCode": 0,
[2026-03-13 10:42:37]     "pilotErrorDiag": "",
[2026-03-13 10:42:37]  *** Listing of results directory ***
[2026-03-13 10:42:37] total 729656
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc    585013 Mar 12 16:14 pilot3.tar.gz
[2026-03-13 10:42:37] -rwx------. 1 boinc boinc     36322 Mar 12 16:15 runpilot2-wrapper.sh
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc      5111 Mar 12 16:15 queuedata.json
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc       100 Mar 13 05:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 10:42:37] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 05:59 run_atlas
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc       105 Mar 13 05:59 job.xml
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc      6391 Mar 13 05:59 init_data.xml
[2026-03-13 10:42:37] -rw-r--r--. 2 boinc boinc 533296111 Mar 13 05:59 EVNT.48329618._000074.pool.root.1
[2026-03-13 10:42:37] -rw-r--r--. 2 boinc boinc     15845 Mar 13 05:59 start_atlas.sh
[2026-03-13 10:42:37] drwxrwx--x. 2 boinc boinc        68 Mar 13 05:59 shared
[2026-03-13 10:42:37] -rw-r--r--. 2 boinc boinc    597516 Mar 13 05:59 input.tar.gz
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc         0 Mar 13 05:59 boinc_lockfile
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc      2499 Mar 13 06:00 pandaJob.out
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc       415 Mar 13 06:04 workernode_map.json
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc   1006514 Mar 13 06:05 agis_schedconf.cvmfs.json
[2026-03-13 10:42:37] drwx------. 5 boinc boinc      4096 Mar 13 06:05 pilot3
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc 204272350 Mar 13 10:40 HITS.48996069._004033.pool.root.1
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc       531 Mar 13 10:40 boinc_task_state.xml
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc      1013 Mar 13 10:41 memory_monitor_summary.json
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc   1511578 Mar 13 10:41 agis_ddmendpoints.agis.ALL.json
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc    522896 Mar 13 10:41 log.48996069._004033.job.log.tgz.1
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc        95 Mar 13 10:41 pilot_heartbeat.json
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc      6323 Mar 13 10:41 heartbeat.json
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc      8192 Mar 13 10:42 boinc_mmap_file
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc        28 Mar 13 10:42 wrapper_checkpoint.txt
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc      4879 Mar 13 10:42 pilotlog.txt
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc   2312771 Mar 13 10:42 log.48996069._004033.job.log.1
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc       357 Mar 13 10:42 output.list
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc       620 Mar 13 10:42 runtime_log
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc   2856960 Mar 13 10:42 result.tar.gz
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc       656 Mar 13 10:42 VFOODmAwwK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmb9mLDmpK8q0n.diag
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc      8816 Mar 13 10:42 runtime_log.err
[2026-03-13 10:42:37] -rw-r--r--. 1 boinc boinc     20764 Mar 13 10:42 stderr.txt
[2026-03-13 10:42:37] HITS file was successfully produced:
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc 204272350 Mar 13 10:40 shared/HITS.pool.root.1
[2026-03-13 10:42:37]  *** Contents of shared directory: ***
[2026-03-13 10:42:37] total 723680
[2026-03-13 10:42:37] -rw-r--r--. 2 boinc boinc 533296111 Mar 13 05:59 ATLAS.root_0
[2026-03-13 10:42:37] -rw-r--r--. 2 boinc boinc     15845 Mar 13 05:59 start_atlas.sh
[2026-03-13 10:42:37] -rw-r--r--. 2 boinc boinc    597516 Mar 13 05:59 input.tar.gz
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc 204272350 Mar 13 10:40 HITS.pool.root.1
[2026-03-13 10:42:37] -rw-------. 1 boinc boinc   2856960 Mar 13 10:42 result.tar.gz
10:42:38 (1963): run_atlas exited; CPU time 63566.110195
10:42:38 (1963): called boinc_finish(0)

</stderr_txt>
]]>

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