Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:37:54 (559533): wrapper (7.7.26015): starting
16:37:54 (559533): wrapper: running run_atlas (--nthreads 10)
[2026-03-12 16:37:54] Arguments: --nthreads 10
[2026-03-12 16:37:54] Threads: 10
[2026-03-12 16:37:54] Checking for CVMFS
[2026-03-12 16:37:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 16:37:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 16:37:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 16:37:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 16:37:55] 2.13.3.0 9377 111277 378400 157214 3 58 25660390 39288832 2539 16776704 0 173396868 99.540 257136628 31835 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 16:37:55] CVMFS is ok
[2026-03-12 16:37:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 16:37:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 16:37:55] Further information can be found at the LHC@home message board.
[2026-03-12 16:37:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 16:37:55] Checking for apptainer binary...
[2026-03-12 16:37:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 16:37:55] Running /usr/bin/apptainer --version
[2026-03-12 16:37:55] apptainer version 1.4.5-2.el9
[2026-03-12 16:37:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 16:37:55] c-211-26.aglt2.org
[2026-03-12 16:37:55] apptainer works
[2026-03-12 16:37:55] Set ATHENA_PROC_NUMBER=10
[2026-03-12 16:37:55] Set ATHENA_CORE_NUMBER=10
[2026-03-12 16:37:55] Starting ATLAS job with PandaID=7051858928
[2026-03-12 16:37:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 20:31:48]  *** The last 200 lines of the pilot log: ***
[2026-03-12 20:31:48] 2026-03-13 00:30:42,455 | INFO     | log transfer has been attempted: DONE
[2026-03-12 20:31:48] 2026-03-13 00:30:42,455 | INFO     | job 7051858928 has finished - writing final server update
[2026-03-12 20:31:48] 2026-03-13 00:30:42,456 | INFO     | total number of processed events: 400 (read)
[2026-03-12 20:31:48] 2026-03-13 00:30:42,468 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7051858928/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 20:31:48] 2026-03-13 00:30:42,469 | INFO     | extracted standard info from prmon json
[2026-03-12 20:31:48] 2026-03-13 00:30:42,469 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 20:31:48] 2026-03-13 00:30:42,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 20:31:48] 2026-03-13 00:30:42,470 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 20:31:48] 2026-03-13 00:30:42,470 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 20:31:48] 2026-03-13 00:30:42,477 | INFO     | fitting pss+swap vs Time
[2026-03-12 20:31:48] 2026-03-13 00:30:42,477 | INFO     | sum of square deviations: 3675604819.2456164
[2026-03-12 20:31:48] 2026-03-13 00:30:42,479 | INFO     | sum of deviations: -998786009.1754558
[2026-03-12 20:31:48] 2026-03-13 00:30:42,480 | INFO     | mean x: 1773354854.745614
[2026-03-12 20:31:48] 2026-03-13 00:30:42,480 | INFO     | mean y: 2612531.8245614036
[2026-03-12 20:31:48] 2026-03-13 00:30:42,481 | INFO     | intersect: 484492958.40067375
[2026-03-12 20:31:48] 2026-03-13 00:30:42,481 | INFO     | chi2: 1.995679574036757
[2026-03-12 20:31:48] 2026-03-13 00:30:42,482 | INFO     | sum of square deviations: 3438999526.233188
[2026-03-12 20:31:48] 2026-03-13 00:30:42,484 | INFO     | sum of deviations: -791653778.0179281
[2026-03-12 20:31:48] 2026-03-13 00:30:42,485 | INFO     | mean x: 1773354702.2197309
[2026-03-12 20:31:48] 2026-03-13 00:30:42,485 | INFO     | mean y: 2612665.3677130044
[2026-03-12 20:31:48] 2026-03-13 00:30:42,485 | INFO     | intersect: 410836900.08164203
[2026-03-12 20:31:48] 2026-03-13 00:30:42,485 | INFO     | chi2: 1.995933079819173
[2026-03-12 20:31:48] 2026-03-13 00:30:42,486 | INFO     | current chi2=1.995933079819173 (change=-0.012702729722448866 %)
[2026-03-12 20:31:48] 2026-03-13 00:30:42,486 | INFO     | right removable region: 222
[2026-03-12 20:31:48] 2026-03-13 00:30:42,486 | INFO     | sum of square deviations: 3439062373.9372087
[2026-03-12 20:31:48] 2026-03-13 00:30:42,488 | INFO     | sum of deviations: -42917538485.322876
[2026-03-12 20:31:48] 2026-03-13 00:30:42,488 | INFO     | mean x: 1773355007.251121
[2026-03-12 20:31:48] 2026-03-13 00:30:42,489 | INFO     | mean y: 2639334.291479821
[2026-03-12 20:31:48] 2026-03-13 00:30:42,489 | INFO     | intersect: 22133099179.57419
[2026-03-12 20:31:48] 2026-03-13 00:30:42,489 | INFO     | chi2: 0.3089600115824656
[2026-03-12 20:31:48] 2026-03-13 00:30:42,489 | INFO     | current chi2=0.3089600115824656 (change=84.51855620501657 %)
[2026-03-12 20:31:48] 2026-03-13 00:30:42,490 | INFO     | sum of square deviations: 3212892216.114689
[2026-03-12 20:31:48] 2026-03-13 00:30:42,492 | INFO     | sum of deviations: -45508354613.582596
[2026-03-12 20:31:48] 2026-03-13 00:30:42,492 | INFO     | mean x: 1773355159.7568808
[2026-03-12 20:31:48] 2026-03-13 00:30:42,493 | INFO     | mean y: 2641081.5550458715
[2026-03-12 20:31:48] 2026-03-13 00:30:42,493 | INFO     | intersect: 25120967510.704624
[2026-03-12 20:31:48] 2026-03-13 00:30:42,493 | INFO     | chi2: 0.28846109320277136
[2026-03-12 20:31:48] 2026-03-13 00:30:42,493 | INFO     | current chi2=0.28846109320277136 (change=6.634812794931171 %)
[2026-03-12 20:31:48] 2026-03-13 00:30:42,494 | INFO     | left removable region: 20
[2026-03-12 20:31:48] 2026-03-13 00:30:42,494 | INFO     | sum of square deviations: 2556105197.094046
[2026-03-12 20:31:48] 2026-03-13 00:30:42,496 | INFO     | sum of deviations: -30470145674.440594
[2026-03-12 20:31:48] 2026-03-13 00:30:42,496 | INFO     | mean x: 1773355281.7376237
[2026-03-12 20:31:48] 2026-03-13 00:30:42,496 | INFO     | mean y: 2631444.123762376
[2026-03-12 20:31:48] 2026-03-13 00:30:42,496 | INFO     | intersect: 21141978067.460705
[2026-03-12 20:31:48] 2026-03-13 00:30:42,497 | INFO     | chi2: 0.23350469019972359
[2026-03-12 20:31:48] 2026-03-13 00:30:42,497 | INFO     | current memory leak: -11.92 B/s (using 202 data points, chi2=0.23)
[2026-03-12 20:31:48] 2026-03-13 00:30:42,498 | INFO     | could have reported an average CPU frequency of 2899 MHz (11 samples)
[2026-03-12 20:31:48] 2026-03-13 00:30:42,498 | INFO     | ..............................
[2026-03-12 20:31:48] 2026-03-13 00:30:42,498 | INFO     | . Timing measurements:
[2026-03-12 20:31:48] 2026-03-13 00:30:42,498 | INFO     | . get job = 0 s
[2026-03-12 20:31:48] 2026-03-13 00:30:42,498 | INFO     | . initial setup = 8 s
[2026-03-12 20:31:48] 2026-03-13 00:30:42,499 | INFO     | . payload setup = 15 s
[2026-03-12 20:31:48] 2026-03-13 00:30:42,499 | INFO     | . stage-in = 0 s
[2026-03-12 20:31:48] 2026-03-13 00:30:42,499 | INFO     | . payload execution = 13918 s
[2026-03-12 20:31:48] 2026-03-13 00:30:42,499 | INFO     | . stage-out = 2 s
[2026-03-12 20:31:48] 2026-03-13 00:30:42,499 | INFO     | . log creation = 0 s
[2026-03-12 20:31:48] 2026-03-13 00:30:42,499 | INFO     | ..............................
[2026-03-12 20:31:48] 2026-03-13 00:30:42,699 | INFO     | 
[2026-03-12 20:31:48] 2026-03-13 00:30:42,700 | INFO     | job summary report
[2026-03-12 20:31:48] 2026-03-13 00:30:42,700 | INFO     | --------------------------------------------------
[2026-03-12 20:31:48] 2026-03-13 00:30:42,701 | INFO     | PanDA job id: 7051858928
[2026-03-12 20:31:48] 2026-03-13 00:30:42,701 | INFO     | task id: 48967085
[2026-03-12 20:31:48] 2026-03-13 00:30:42,701 | INFO     | errors: (none)
[2026-03-12 20:31:48] 2026-03-13 00:30:42,701 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 20:31:48] 2026-03-13 00:30:42,702 | INFO     | pilot state: finished 
[2026-03-12 20:31:48] 2026-03-13 00:30:42,702 | INFO     | transexitcode: 0
[2026-03-12 20:31:48] 2026-03-13 00:30:42,702 | INFO     | exeerrorcode: 0
[2026-03-12 20:31:48] 2026-03-13 00:30:42,702 | INFO     | exeerrordiag: 
[2026-03-12 20:31:48] 2026-03-13 00:30:42,702 | INFO     | exitcode: 0
[2026-03-12 20:31:48] 2026-03-13 00:30:42,702 | INFO     | exitmsg: OK
[2026-03-12 20:31:48] 2026-03-13 00:30:42,703 | INFO     | cpuconsumptiontime: 87502 s
[2026-03-12 20:31:48] 2026-03-13 00:30:42,703 | INFO     | nevents: 400
[2026-03-12 20:31:48] 2026-03-13 00:30:42,703 | INFO     | neventsw: 0
[2026-03-12 20:31:48] 2026-03-13 00:30:42,703 | INFO     | pid: 584244
[2026-03-12 20:31:48] 2026-03-13 00:30:42,703 | INFO     | pgrp: 584244
[2026-03-12 20:31:48] 2026-03-13 00:30:42,704 | INFO     | corecount: 10
[2026-03-12 20:31:48] 2026-03-13 00:30:42,704 | INFO     | event service: False
[2026-03-12 20:31:48] 2026-03-13 00:30:42,704 | INFO     | sizes: {0: 2279809, 1: 2280270, 2: 2280298, 13937: 2310621, 13938: 2310620, 13940: 2319674, 13941: 2319858, 13943: 2320052}
[2026-03-12 20:31:48] 2026-03-13 00:30:42,704 | INFO     | --------------------------------------------------
[2026-03-12 20:31:48] 2026-03-13 00:30:42,704 | INFO     | 
[2026-03-12 20:31:48] 2026-03-13 00:30:42,704 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 20:31:48] 2026-03-13 00:30:42,759 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,760 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,760 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,760 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,762 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 20:31:48] 2026-03-13 00:30:42,763 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,763 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 20:31:48] 2026-03-13 00:30:42,763 | INFO     | job 7051858928 has completed (purged errors)
[2026-03-12 20:31:48] 2026-03-13 00:30:42,763 | INFO     | overall cleanup function is called
[2026-03-12 20:31:48] 2026-03-13 00:30:43,457 | WARNING  | process 584244 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 20:31:48] 2026-03-13 00:30:43,790 | INFO     | --- collectZombieJob: --- 10, [584244]
[2026-03-12 20:31:48] 2026-03-13 00:30:43,790 | INFO     | zombie collector waiting for pid 584244
[2026-03-12 20:31:48] 2026-03-13 00:30:43,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 20:31:48] 2026-03-13 00:30:43,790 | INFO     | collected zombie processes
[2026-03-12 20:31:48] 2026-03-13 00:30:43,790 | INFO     | will attempt to kill all subprocesses of pid=584244
[2026-03-12 20:31:48] 2026-03-13 00:30:45,059 | INFO     | PID=567628 has CPU usage=19.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 20:31:48] 2026-03-13 00:30:45,083 | INFO     | .. there are 18 such processes running
[2026-03-12 20:31:48] 2026-03-13 00:30:45,082 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 20:31:48] 2026-03-13 00:30:45,534 | INFO     | process IDs to be killed: [584244] (in reverse order)
[2026-03-12 20:31:48] 2026-03-13 00:30:45,737 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 20:31:48] 2026-03-13 00:30:45,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 20:31:48] 2026-03-13 00:30:45,794 | INFO     | did not find any defunct processes belonging to 584244
[2026-03-12 20:31:48] 2026-03-13 00:30:45,866 | INFO     | did not find any defunct processes belonging to 584244
[2026-03-12 20:31:48] 2026-03-13 00:30:45,867 | INFO     | ready for new job
[2026-03-12 20:31:48] 2026-03-13 00:30:45,867 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 20:31:48] 2026-03-13 00:30:45,869 | INFO     | **************************************
[2026-03-12 20:31:48] 2026-03-13 00:30:45,869 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 20:31:48] 2026-03-13 00:30:45,870 | INFO     | **************************************
[2026-03-12 20:31:48] 2026-03-13 00:30:45,870 | INFO     | 
[2026-03-12 20:31:48] 2026-03-13 00:30:45,872 | INFO     | architecture information:
[2026-03-12 20:31:48] 2026-03-13 00:30:45,879 | INFO     | executing command: cat /etc/os-release
[2026-03-12 20:31:48] 2026-03-13 00:30:45,930 | INFO     | cat /etc/os-release:
[2026-03-12 20:31:48] NAME="CentOS Linux"
[2026-03-12 20:31:48] VERSION="7 (Core)"
[2026-03-12 20:31:48] ID="centos"
[2026-03-12 20:31:48] ID_LIKE="rhel fedora"
[2026-03-12 20:31:48] VERSION_ID="7"
[2026-03-12 20:31:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 20:31:48] ANSI_COLOR="0;31"
[2026-03-12 20:31:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 20:31:48] HOME_URL="https://www.centos.org/"
[2026-03-12 20:31:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 20:31:48] 
[2026-03-12 20:31:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 20:31:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 20:31:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 20:31:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 20:31:48] 
[2026-03-12 20:31:48] 2026-03-13 00:30:45,930 | INFO     | **************************************
[2026-03-12 20:31:48] 2026-03-13 00:30:46,227 | INFO     | number of running child processes to parent process 584244: 1
[2026-03-12 20:31:48] 2026-03-13 00:30:46,227 | INFO     | maximum number of monitored processes: 6
[2026-03-12 20:31:48] 2026-03-13 00:30:46,227 | INFO     | aborting job monitoring since job object (job id=7051858928) has expired
[2026-03-12 20:31:48] 2026-03-13 00:30:46,436 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 20:31:48] 2026-03-13 00:30:46,532 | INFO     | sufficient remaining disk space (51749322752 B)
[2026-03-12 20:31:48] 2026-03-13 00:30:46,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 20:31:48] 2026-03-13 00:30:46,533 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 20:31:48] 2026-03-13 00:30:46,533 | INFO     | update_server=False
[2026-03-12 20:31:48] 2026-03-13 00:30:46,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 20:31:48] 2026-03-13 00:30:46,534 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 20:31:48] 2026-03-13 00:30:46,534 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 20:31:48] 2026-03-13 00:30:46,534 | INFO     | will abort loop
[2026-03-12 20:31:48] 2026-03-13 00:30:46,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 20:31:48] 2026-03-13 00:30:46,856 | INFO     | all job control threads have been joined
[2026-03-12 20:31:48] 2026-03-13 00:30:47,115 | INFO     | all data control threads have been joined
[2026-03-12 20:31:48] 2026-03-13 00:30:47,539 | INFO     | [job] retrieve thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:47,546 | INFO     | [job] job monitor thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:47,674 | INFO     | all payload control threads have been joined
[2026-03-12 20:31:48] 2026-03-13 00:30:47,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 20:31:48] 2026-03-13 00:30:47,861 | INFO     | [job] control thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:48,014 | INFO     | [payload] validate_post thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:48,020 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:48,121 | INFO     | [data] control thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:48,201 | INFO     | [data] copytool_in thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:48,459 | INFO     | [payload] failed_post thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:48,541 | INFO     | [data] copytool_out thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:48,680 | INFO     | [payload] control thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:48,684 | INFO     | [job] validate thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:48,714 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:48,728 | INFO     | [job] queue monitor thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:48,891 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:50,543 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:30:57,109 | INFO     | job.realtimelogging is not enabled
[2026-03-12 20:31:48] 2026-03-13 00:30:58,115 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 20:31:48] 2026-03-13 00:31:18,310 | INFO     | PID=567628 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 20:31:48] 2026-03-13 00:31:18,311 | INFO     | .. there are 18 such processes running
[2026-03-12 20:31:48] 2026-03-13 00:31:18,311 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 20:31:48] 2026-03-13 00:31:18,311 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 20:31:48] 2026-03-13 00:31:18,311 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 20:31:48] 2026-03-13 00:31:41,122 | INFO     | [monitor] cgroup control has ended
[2026-03-12 20:31:48] 2026-03-13 00:31:41,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139650399582016)>', '<ExcThread(monitor, started 139650039535360)>']
[2026-03-12 20:31:48] 2026-03-13 00:31:42,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 20:31:48] 2026-03-13 00:31:42,464 | INFO     | [monitor] control thread has ended
[2026-03-12 20:31:48] 2026-03-13 00:31:46,955 | INFO     | all workflow threads have been joined
[2026-03-12 20:31:48] 2026-03-13 00:31:46,955 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 20:31:48] 2026-03-13 00:31:46,955 | INFO     | traces error code: 0
[2026-03-12 20:31:48] 2026-03-13 00:31:46,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 20:31:48] 2026-03-13 00:31:47,360 [wrapper] ==== pilot stdout END ====
[2026-03-12 20:31:48] 2026-03-13 00:31:47,376 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 20:31:48] 2026-03-13 00:31:47,391 [wrapper] pilotpid: 567628
[2026-03-12 20:31:48] 2026-03-13 00:31:47,407 [wrapper] Pilot exit status: 0
[2026-03-12 20:31:48] 2026-03-13 00:31:47,477 [wrapper] pandaids: 7051858928
[2026-03-12 20:31:48] 2026-03-13 00:31:47,799 [wrapper] cleanup supervisor_pilot  488590 567629
[2026-03-12 20:31:48] 2026-03-13 00:31:47,815 [wrapper] Test setup, not cleaning
[2026-03-12 20:31:48] 2026-03-13 00:31:47,828 [wrapper] apfmon messages muted
[2026-03-12 20:31:48] 2026-03-13 00:31:47,831 [wrapper] ==== wrapper stdout END ====
[2026-03-12 20:31:48] 2026-03-13 00:31:47,834 [wrapper] ==== wrapper stderr END ====
[2026-03-12 20:31:48]  *** Error codes and diagnostics ***
[2026-03-12 20:31:48]     "exeErrorCode": 0,
[2026-03-12 20:31:48]     "exeErrorDiag": "",
[2026-03-12 20:31:48]     "pilotErrorCode": 0,
[2026-03-12 20:31:48]     "pilotErrorDiag": "",
[2026-03-12 20:31:48]  *** Listing of results directory ***
[2026-03-12 20:31:48] total 406160
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 10:32 pilot3.tar.gz
[2026-03-12 20:31:48] -rwx------. 1 boincer umatlas     36322 Mar 12 10:40 runpilot2-wrapper.sh
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 10:41 queuedata.json
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas       100 Mar 12 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 20:31:48] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 16:37 run_atlas
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas       105 Mar 12 16:37 job.xml
[2026-03-12 20:31:48] -rw-r--r--. 2 boincer umatlas 213034461 Mar 12 16:37 EVNT.48967083._000619.pool.root.1
[2026-03-12 20:31:48] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 16:37 start_atlas.sh
[2026-03-12 20:31:48] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 16:37 shared
[2026-03-12 20:31:48] -rw-r--r--. 2 boincer umatlas    597527 Mar 12 16:37 input.tar.gz
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas         0 Mar 12 16:37 boinc_lockfile
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas      2563 Mar 12 16:37 pandaJob.out
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas        57 Mar 12 16:37 setup.sh.local
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas   1006522 Mar 12 16:38 agis_schedconf.cvmfs.json
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas       434 Mar 12 16:38 workernode_map.json
[2026-03-12 20:31:48] drwx------. 5 boincer umatlas      4096 Mar 12 16:38 pilot3
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas      6524 Mar 12 20:28 init_data.xml
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas 194367484 Mar 12 20:29 HITS.48967085._015325.pool.root.1
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas       530 Mar 12 20:30 boinc_task_state.xml
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas        95 Mar 12 20:30 pilot_heartbeat.json
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas      1048 Mar 12 20:30 memory_monitor_summary.json
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas   1511578 Mar 12 20:30 agis_ddmendpoints.agis.ALL.json
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas    486938 Mar 12 20:30 log.48967085._015325.job.log.tgz.1
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas      6388 Mar 12 20:30 heartbeat.json
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 20:31 boinc_mmap_file
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas        28 Mar 12 20:31 wrapper_checkpoint.txt
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas      5180 Mar 12 20:31 pilotlog.txt
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas   1797378 Mar 12 20:31 log.48967085._015325.job.log.1
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas       357 Mar 12 20:31 output.list
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas       620 Mar 12 20:31 runtime_log
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas   2304000 Mar 12 20:31 result.tar.gz
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas      9344 Mar 12 20:31 runtime_log.err
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas       657 Mar 12 20:31 5RbMDmhOwK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmoNkLDmHUQV8n.diag
[2026-03-12 20:31:48] -rw-r--r--. 1 boincer umatlas     21408 Mar 12 20:31 stderr.txt
[2026-03-12 20:31:48] HITS file was successfully produced:
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas 194367484 Mar 12 20:29 shared/HITS.pool.root.1
[2026-03-12 20:31:48]  *** Contents of shared directory: ***
[2026-03-12 20:31:48] total 400712
[2026-03-12 20:31:48] -rw-r--r--. 2 boincer umatlas 213034461 Mar 12 16:37 ATLAS.root_0
[2026-03-12 20:31:48] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 16:37 start_atlas.sh
[2026-03-12 20:31:48] -rw-r--r--. 2 boincer umatlas    597527 Mar 12 16:37 input.tar.gz
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas 194367484 Mar 12 20:29 HITS.pool.root.1
[2026-03-12 20:31:48] -rw-------. 1 boincer umatlas   2304000 Mar 12 20:31 result.tar.gz
20:31:49 (559533): run_atlas exited; CPU time 88452.282601
20:31:49 (559533): called boinc_finish(0)

</stderr_txt>
]]>

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