Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:49:35 (755669): wrapper (7.7.26015): starting
02:49:35 (755669): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 02:49:35] Arguments: --nthreads 4
[2026-03-15 02:49:35] Threads: 4
[2026-03-15 02:49:35] Checking for CVMFS
[2026-03-15 02:49:35] No cvmfs_config command found, will try listing directly
[2026-03-15 02:49:35] CVMFS is ok
[2026-03-15 02:49:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 02:49:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 02:49:35] Further information can be found at the LHC@home message board.
[2026-03-15 02:49:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 02:49:35] Checking for apptainer binary...
[2026-03-15 02:49:35] which: no apptainer in ((null))
[2026-03-15 02:49:35] apptainer is not installed, using version from CVMFS
[2026-03-15 02:49:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 02:49:35] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot168/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-15 02:49:35] apptainer works
[2026-03-15 02:49:35] Set ATHENA_PROC_NUMBER=4
[2026-03-15 02:49:35] Set ATHENA_CORE_NUMBER=4
[2026-03-15 02:49:35] Starting ATLAS job with PandaID=7043304865
[2026-03-15 02:49:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot168/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 04:10:16]  *** The last 200 lines of the pilot log: ***
[2026-03-15 04:10:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 04:10:16]  is_altstaged=None
[2026-03-15 04:10:16]  is_tar=False
[2026-03-15 04:10:16]  lfn=log.48955006._046184.job.log.tgz.1
[2026-03-15 04:10:16]  mtime=0
[2026-03-15 04:10:16]  protocol_id=None
[2026-03-15 04:10:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 04:10:16]  replicas=None
[2026-03-15 04:10:16]  scope=mc23_13p6TeV
[2026-03-15 04:10:16]  status=None
[2026-03-15 04:10:16]  status_code=0
[2026-03-15 04:10:16]  storage_token=
[2026-03-15 04:10:16]  surl=/var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7043304865/log.48955006._046184.job.log.tgz.1
[2026-03-15 04:10:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/ca/log.48955006._046184.job.log.tgz.1
[2026-03-15 04:10:16]  workdir=None
[2026-03-15 04:10:16] ]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,578 | INFO     | transferring file log.48955006._046184.job.log.tgz.1 from /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7043304865/log.48955006._046184.job.log.tgz.1 to /var/lib/
[2026-03-15 04:10:16] 2026-03-15 03:09:10,578 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7043304865/log.48955006._046184.job.log.tgz.1 /var/lib/boinc/var/slot168/slots/0/
[2026-03-15 04:10:16] 2026-03-15 03:09:10,601 | INFO     | adding to output.list: log.48955006._046184.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/ca/log.48955006._046184.job.log.tg
[2026-03-15 04:10:16] 2026-03-15 03:09:10,602 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 04:10:16] 2026-03-15 03:09:10,603 | INFO     | summary of transferred files:
[2026-03-15 04:10:16] 2026-03-15 03:09:10,603 | INFO     |  -- lfn=log.48955006._046184.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 04:10:16] 2026-03-15 03:09:10,603 | INFO     | stage-out finished correctly
[2026-03-15 04:10:16] 2026-03-15 03:09:10,658 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 04:10:16] 2026-03-15 03:09:10,724 | INFO     | job 7043304865 has state=finished
[2026-03-15 04:10:16] 2026-03-15 03:09:10,724 | INFO     | preparing for final server update for job 7043304865 in state='finished'
[2026-03-15 04:10:16] 2026-03-15 03:09:10,724 | INFO     | reading metadata from: /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7043304865/jobReport.json
[2026-03-15 04:10:16] 2026-03-15 03:09:10,726 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot168/slots/0/workernode_map.json
[2026-03-15 04:10:16] 2026-03-15 03:09:10,726 | INFO     | this job has now completed (state=finished)
[2026-03-15 04:10:16] 2026-03-15 03:09:10,726 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 04:10:16] 2026-03-15 03:09:10,726 | INFO     | log transfer has been attempted: DONE
[2026-03-15 04:10:16] 2026-03-15 03:09:10,726 | INFO     | job 7043304865 has finished - writing final server update
[2026-03-15 04:10:16] 2026-03-15 03:09:10,727 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1893392/.job.ad'
[2026-03-15 04:10:16] 2026-03-15 03:09:10,727 | INFO     | total number of processed events: 400 (read)
[2026-03-15 04:10:16] 2026-03-15 03:09:10,753 | INFO     | using path: /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7043304865/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 04:10:16] 2026-03-15 03:09:10,754 | INFO     | extracted standard info from prmon json
[2026-03-15 04:10:16] 2026-03-15 03:09:10,754 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 04:10:16] 2026-03-15 03:09:10,754 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 04:10:16] 2026-03-15 03:09:10,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 04:10:16] 2026-03-15 03:09:10,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 04:10:16] 2026-03-15 03:09:10,755 | INFO     | fitting pss+swap vs Time
[2026-03-15 04:10:16] 2026-03-15 03:09:10,756 | INFO     | sum of square deviations: 110960220.0
[2026-03-15 04:10:16] 2026-03-15 03:09:10,756 | INFO     | sum of deviations: 281648712.00000006
[2026-03-15 04:10:16] 2026-03-15 03:09:10,756 | INFO     | mean x: 1773541867.0
[2026-03-15 04:10:16] 2026-03-15 03:09:10,756 | INFO     | mean y: 2329539.2112676054
[2026-03-15 04:10:16] 2026-03-15 03:09:10,756 | INFO     | intersect: -4499425977.483143
[2026-03-15 04:10:16] 2026-03-15 03:09:10,756 | INFO     | chi2: 0.0004250192306853417
[2026-03-15 04:10:16] 2026-03-15 03:09:10,756 | INFO     | current memory leak: 2.54 B/s (using 71 data points, chi2=0.00)
[2026-03-15 04:10:16] 2026-03-15 03:09:10,757 | INFO     | could have reported an average CPU frequency of 3565 MHz (6 samples)
[2026-03-15 04:10:16] 2026-03-15 03:09:10,757 | INFO     | ..............................
[2026-03-15 04:10:16] 2026-03-15 03:09:10,757 | INFO     | . Timing measurements:
[2026-03-15 04:10:16] 2026-03-15 03:09:10,757 | INFO     | . get job = 0 s
[2026-03-15 04:10:16] 2026-03-15 03:09:10,757 | INFO     | . initial setup = 10 s
[2026-03-15 04:10:16] 2026-03-15 03:09:10,757 | INFO     | . payload setup = 8 s
[2026-03-15 04:10:16] 2026-03-15 03:09:10,757 | INFO     | . stage-in = 0 s
[2026-03-15 04:10:16] 2026-03-15 03:09:10,757 | INFO     | . payload execution = 4724 s
[2026-03-15 04:10:16] 2026-03-15 03:09:10,757 | INFO     | . stage-out = 0 s
[2026-03-15 04:10:16] 2026-03-15 03:09:10,757 | INFO     | . log creation = 0 s
[2026-03-15 04:10:16] 2026-03-15 03:09:10,757 | INFO     | ..............................
[2026-03-15 04:10:16] 2026-03-15 03:09:10,829 | INFO     | 
[2026-03-15 04:10:16] 2026-03-15 03:09:10,830 | INFO     | job summary report
[2026-03-15 04:10:16] 2026-03-15 03:09:10,830 | INFO     | --------------------------------------------------
[2026-03-15 04:10:16] 2026-03-15 03:09:10,830 | INFO     | PanDA job id: 7043304865
[2026-03-15 04:10:16] 2026-03-15 03:09:10,830 | INFO     | task id: 48955006
[2026-03-15 04:10:16] 2026-03-15 03:09:10,830 | INFO     | errors: (none)
[2026-03-15 04:10:16] 2026-03-15 03:09:10,830 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 04:10:16] 2026-03-15 03:09:10,830 | INFO     | pilot state: finished 
[2026-03-15 04:10:16] 2026-03-15 03:09:10,830 | INFO     | transexitcode: 0
[2026-03-15 04:10:16] 2026-03-15 03:09:10,830 | INFO     | exeerrorcode: 0
[2026-03-15 04:10:16] 2026-03-15 03:09:10,830 | INFO     | exeerrordiag: 
[2026-03-15 04:10:16] 2026-03-15 03:09:10,830 | INFO     | exitcode: 0
[2026-03-15 04:10:16] 2026-03-15 03:09:10,830 | INFO     | exitmsg: OK
[2026-03-15 04:10:16] 2026-03-15 03:09:10,831 | INFO     | cpuconsumptiontime: 17906 s
[2026-03-15 04:10:16] 2026-03-15 03:09:10,831 | INFO     | nevents: 400
[2026-03-15 04:10:16] 2026-03-15 03:09:10,831 | INFO     | neventsw: 0
[2026-03-15 04:10:16] 2026-03-15 03:09:10,831 | INFO     | pid: 766855
[2026-03-15 04:10:16] 2026-03-15 03:09:10,831 | INFO     | pgrp: 766855
[2026-03-15 04:10:16] 2026-03-15 03:09:10,831 | INFO     | corecount: 4
[2026-03-15 04:10:16] 2026-03-15 03:09:10,831 | INFO     | event service: False
[2026-03-15 04:10:16] 2026-03-15 03:09:10,831 | INFO     | sizes: {0: 2279138, 1: 2280268, 12: 2280268, 4735: 2306580, 4737: 2315658, 4738: 2315796}
[2026-03-15 04:10:16] 2026-03-15 03:09:10,831 | INFO     | --------------------------------------------------
[2026-03-15 04:10:16] 2026-03-15 03:09:10,831 | INFO     | 
[2026-03-15 04:10:16] 2026-03-15 03:09:10,831 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot168/slots/0
[2026-03-15 04:10:16] 2026-03-15 03:09:10,851 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 04:10:16] 2026-03-15 03:09:10,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,853 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 04:10:16] 2026-03-15 03:09:10,853 | INFO     | job 7043304865 has completed (purged errors)
[2026-03-15 04:10:16] 2026-03-15 03:09:10,853 | INFO     | overall cleanup function is called
[2026-03-15 04:10:16] 2026-03-15 03:09:11,079 | INFO     | number of running child processes to parent process 766855: 1
[2026-03-15 04:10:16] 2026-03-15 03:09:11,079 | INFO     | maximum number of monitored processes: 6
[2026-03-15 04:10:16] 2026-03-15 03:09:11,079 | INFO     | aborting job monitoring since job object (job id=7043304865) has expired
[2026-03-15 04:10:16] 2026-03-15 03:09:11,861 | INFO     | --- collectZombieJob: --- 10, [766855]
[2026-03-15 04:10:16] 2026-03-15 03:09:11,862 | INFO     | zombie collector waiting for pid 766855
[2026-03-15 04:10:16] 2026-03-15 03:09:11,862 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 04:10:16] 2026-03-15 03:09:11,862 | INFO     | collected zombie processes
[2026-03-15 04:10:16] 2026-03-15 03:09:11,862 | INFO     | will attempt to kill all subprocesses of pid=766855
[2026-03-15 04:10:16] 2026-03-15 03:09:12,343 | INFO     | process IDs to be killed: [766855] (in reverse order)
[2026-03-15 04:10:16] 2026-03-15 03:09:12,602 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 04:10:16] 2026-03-15 03:09:12,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 04:10:16] 2026-03-15 03:09:12,633 | INFO     | did not find any defunct processes belonging to 766855
[2026-03-15 04:10:16] 2026-03-15 03:09:12,662 | INFO     | did not find any defunct processes belonging to 766855
[2026-03-15 04:10:16] 2026-03-15 03:09:12,662 | INFO     | ready for new job
[2026-03-15 04:10:16] 2026-03-15 03:09:12,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 04:10:16] 2026-03-15 03:09:12,664 | INFO     | **************************************
[2026-03-15 04:10:16] 2026-03-15 03:09:12,664 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 04:10:16] 2026-03-15 03:09:12,664 | INFO     | **************************************
[2026-03-15 04:10:16] 2026-03-15 03:09:12,664 | INFO     | 
[2026-03-15 04:10:16] 2026-03-15 03:09:12,670 | INFO     | architecture information:
[2026-03-15 04:10:16] 2026-03-15 03:09:12,670 | INFO     | executing command: cat /etc/os-release
[2026-03-15 04:10:16] 2026-03-15 03:09:12,686 | INFO     | cat /etc/os-release:
[2026-03-15 04:10:16] NAME="CentOS Linux"
[2026-03-15 04:10:16] VERSION="7 (Core)"
[2026-03-15 04:10:16] ID="centos"
[2026-03-15 04:10:16] ID_LIKE="rhel fedora"
[2026-03-15 04:10:16] VERSION_ID="7"
[2026-03-15 04:10:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 04:10:16] ANSI_COLOR="0;31"
[2026-03-15 04:10:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 04:10:16] HOME_URL="https://www.centos.org/"
[2026-03-15 04:10:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 04:10:16] 
[2026-03-15 04:10:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 04:10:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 04:10:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 04:10:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 04:10:16] 
[2026-03-15 04:10:16] 2026-03-15 03:09:12,686 | INFO     | **************************************
[2026-03-15 04:10:16] 2026-03-15 03:09:13,188 | INFO     | executing command: df -mP /var/lib/boinc/var/slot168/slots/0
[2026-03-15 04:10:16] 2026-03-15 03:09:13,209 | INFO     | sufficient remaining disk space (25186795520 B)
[2026-03-15 04:10:16] 2026-03-15 03:09:13,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 04:10:16] 2026-03-15 03:09:13,209 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 04:10:16] 2026-03-15 03:09:13,209 | INFO     | update_server=False
[2026-03-15 04:10:16] 2026-03-15 03:09:13,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 04:10:16] 2026-03-15 03:09:13,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 04:10:16] 2026-03-15 03:09:13,221 | INFO     | all job control threads have been joined
[2026-03-15 04:10:16] 2026-03-15 03:09:13,587 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 04:10:16] 2026-03-15 03:09:13,587 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 04:10:16] 2026-03-15 03:09:13,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 04:10:16] 2026-03-15 03:09:13,587 | INFO     | will abort loop
[2026-03-15 04:10:16] 2026-03-15 03:09:13,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 04:10:16] 2026-03-15 03:09:13,989 | INFO     | all payload control threads have been joined
[2026-03-15 04:10:16] 2026-03-15 03:09:14,215 | INFO     | [job] retrieve thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:14,226 | INFO     | [job] control thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:14,298 | INFO     | all data control threads have been joined
[2026-03-15 04:10:16] 2026-03-15 03:09:14,311 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:14,479 | INFO     | [payload] validate_post thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:14,593 | INFO     | [job] job monitor thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:14,694 | INFO     | [data] copytool_in thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:14,836 | INFO     | job.realtimelogging is not enabled
[2026-03-15 04:10:16] 2026-03-15 03:09:14,994 | INFO     | [payload] control thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:15,304 | INFO     | [data] control thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:15,373 | INFO     | [job] validate thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:15,377 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:15,426 | INFO     | [payload] failed_post thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:15,489 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:15,672 | INFO     | [data] copytool_out thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:15,841 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:15,845 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 04:10:16] 2026-03-15 03:09:16,850 | INFO     | [job] queue monitor thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:17,218 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 04:10:16] 2026-03-15 03:09:43,128 | INFO     | PID=760626 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 04:10:16] 2026-03-15 03:09:43,128 | INFO     | .. there are 49 such processes running
[2026-03-15 04:10:16] 2026-03-15 03:09:43,129 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 04:10:16] 2026-03-15 03:09:43,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 04:10:16] 2026-03-15 03:09:43,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 04:10:16] 2026-03-15 03:10:09,080 | INFO     | [monitor] cgroup control has ended
[2026-03-15 04:10:16] 2026-03-15 03:10:11,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22592256030528)>', '<ExcThread(monitor, started 22592020039424)>']
[2026-03-15 04:10:16] 2026-03-15 03:10:11,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 04:10:16] 2026-03-15 03:10:11,286 | INFO     | [monitor] control thread has ended
[2026-03-15 04:10:16] 2026-03-15 03:10:16,117 | INFO     | all workflow threads have been joined
[2026-03-15 04:10:16] 2026-03-15 03:10:16,117 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 04:10:16] 2026-03-15 03:10:16,117 | INFO     | traces error code: 0
[2026-03-15 04:10:16] 2026-03-15 03:10:16,118 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 04:10:16] 2026-03-15 03:10:16,335 [wrapper] ==== pilot stdout END ====
[2026-03-15 04:10:16] 2026-03-15 03:10:16,337 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 04:10:16] 2026-03-15 03:10:16,339 [wrapper] pilotpid: 760626
[2026-03-15 04:10:16] 2026-03-15 03:10:16,342 [wrapper] Pilot exit status: 0
[2026-03-15 04:10:16] 2026-03-15 03:10:16,352 [wrapper] pandaids: 7043304865
[2026-03-15 04:10:16] 2026-03-15 03:10:16,486 [wrapper] cleanup supervisor_pilot 1562098 760627
[2026-03-15 04:10:16] 2026-03-15 03:10:16,489 [wrapper] Test setup, not cleaning
[2026-03-15 04:10:16] 2026-03-15 03:10:16,492 [wrapper] apfmon messages muted
[2026-03-15 04:10:16] 2026-03-15 03:10:16,495 [wrapper] ==== wrapper stdout END ====
[2026-03-15 04:10:16] 2026-03-15 03:10:16,497 [wrapper] ==== wrapper stderr END ====
[2026-03-15 04:10:16]  *** Error codes and diagnostics ***
[2026-03-15 04:10:16]     "exeErrorCode": 0,
[2026-03-15 04:10:16]     "exeErrorDiag": "",
[2026-03-15 04:10:16]     "pilotErrorCode": 0,
[2026-03-15 04:10:16]     "pilotErrorDiag": "",
[2026-03-15 04:10:16]  *** Listing of results directory ***
[2026-03-15 04:10:16] total 616452
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc    585013 Mar 12 16:14 pilot3.tar.gz
[2026-03-15 04:10:16] -rwx------. 1 boinc boinc     36322 Mar 12 16:18 runpilot2-wrapper.sh
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc      5111 Mar 12 16:19 queuedata.json
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc       100 Mar 15 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 04:10:16] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 02:49 run_atlas
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc       105 Mar 15 02:49 job.xml
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc      6709 Mar 15 02:49 init_data.xml
[2026-03-15 04:10:16] -rw-r--r--. 2 boinc boinc 439954312 Mar 15 02:49 EVNT.46701403._000915.pool.root.1
[2026-03-15 04:10:16] -rw-r--r--. 2 boinc boinc     15845 Mar 15 02:49 start_atlas.sh
[2026-03-15 04:10:16] drwxrwx--x. 2 boinc boinc      4096 Mar 15 02:49 shared
[2026-03-15 04:10:16] -rw-r--r--. 2 boinc boinc    597523 Mar 15 02:49 input.tar.gz
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc         0 Mar 15 02:49 boinc_lockfile
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc      2563 Mar 15 02:49 pandaJob.out
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc   1006481 Mar 15 02:49 agis_schedconf.cvmfs.json
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc   1511579 Mar 15 02:49 agis_ddmendpoints.agis.ALL.json
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc       445 Mar 15 02:50 workernode_map.json
[2026-03-15 04:10:16] drwx------. 5 boinc boinc      4096 Mar 15 02:50 pilot3
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc 185465833 Mar 15 04:08 HITS.48955006._046184.pool.root.1
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc       530 Mar 15 04:09 boinc_task_state.xml
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc      1029 Mar 15 04:09 memory_monitor_summary.json
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc    251131 Mar 15 04:09 log.48955006._046184.job.log.tgz.1
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc      6356 Mar 15 04:09 heartbeat.json
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc        95 Mar 15 04:09 pilot_heartbeat.json
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc      8192 Mar 15 04:10 boinc_mmap_file
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc        27 Mar 15 04:10 wrapper_checkpoint.txt
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc      5087 Mar 15 04:10 pilotlog.txt
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc    695784 Mar 15 04:10 log.48955006._046184.job.log.1
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc       357 Mar 15 04:10 output.list
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc       620 Mar 15 04:10 runtime_log
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc    962560 Mar 15 04:10 result.tar.gz
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc       663 Mar 15 04:10 JT0MDmvywK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIWkLDmbyLLxm.diag
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc      9221 Mar 15 04:10 runtime_log.err
[2026-03-15 04:10:16] -rw-r--r--. 1 boinc boinc     20517 Mar 15 04:10 stderr.txt
[2026-03-15 04:10:16] HITS file was successfully produced:
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc 185465833 Mar 15 04:08 shared/HITS.pool.root.1
[2026-03-15 04:10:16]  *** Contents of shared directory: ***
[2026-03-15 04:10:16] total 612312
[2026-03-15 04:10:16] -rw-r--r--. 2 boinc boinc 439954312 Mar 15 02:49 ATLAS.root_0
[2026-03-15 04:10:16] -rw-r--r--. 2 boinc boinc     15845 Mar 15 02:49 start_atlas.sh
[2026-03-15 04:10:16] -rw-r--r--. 2 boinc boinc    597523 Mar 15 02:49 input.tar.gz
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc 185465833 Mar 15 04:08 HITS.pool.root.1
[2026-03-15 04:10:16] -rw-------. 1 boinc boinc    962560 Mar 15 04:10 result.tar.gz
04:10:18 (755669): run_atlas exited; CPU time 18122.035671
04:10:18 (755669): called boinc_finish(0)

</stderr_txt>
]]>

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