Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:38:18 (4004125): wrapper (7.7.26015): starting
18:38:18 (4004125): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 18:38:18] Arguments: --nthreads 8
[2026-03-12 18:38:18] Threads: 8
[2026-03-12 18:38:18] Checking for CVMFS
[2026-03-12 18:38:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 18:38:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 18:38:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 18:38:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 18:38:19] 2.11.3.0 1215219 181814 206004 157222 3 422 26552246 45568000 19689 130560 0 1071818820 99.814 625364524 21374 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-03-12 18:38:19] CVMFS is ok
[2026-03-12 18:38:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 18:38:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 18:38:19] Further information can be found at the LHC@home message board.
[2026-03-12 18:38:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 18:38:19] Checking for apptainer binary...
[2026-03-12 18:38:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 18:38:19] Running /usr/bin/apptainer --version
[2026-03-12 18:38:19] apptainer version 1.4.1-1.el9
[2026-03-12 18:38:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 18:38:19] wns0018.triumf.lcg
[2026-03-12 18:38:19] apptainer works
[2026-03-12 18:38:19] Set ATHENA_PROC_NUMBER=8
[2026-03-12 18:38:19] Set ATHENA_CORE_NUMBER=8
[2026-03-12 18:38:20] Starting ATLAS job with PandaID=7043553281
[2026-03-12 18:38:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 18:43:12]  *** The last 200 lines of the pilot log: ***
[2026-03-12 18:43:12] 2026-03-13 01:42:35,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | WARNING  | wrong length of table data, x=[1773366004.0], y=[1665.0] (must be same and length>=4)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | ..............................
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | . Timing measurements:
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | . get job = 0 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | . initial setup = 20 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . payload setup = 24 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . stage-in = 0 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . payload execution = 50 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . stage-out = 0 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . log creation = 0 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | ..............................
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043553281/pilotlog.txt
[2026-03-12 18:43:12] 2026-03-13 01:42:35,021 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-12 18:43:12] - Log from pilotlog.txt -
[2026-03-12 18:43:12] 2026-03-13 01:42:34,999 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7043553281/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,000 | INFO     | extracted standard info from prmon json
[2026-03-12 18:43:12] 2026-03-13 01:42:35,000 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 18:43:12] 2026-03-13 01:42:35,000 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 18:43:12] 2026-03-13 01:42:35,000 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 18:43:12] 2026-03-13 01:42:35,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | WARNING  | wrong length of table data, x=[1773366004.0], y=[1665.0] (must be same and length>=4)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | ..............................
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | . Timing measurements:
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | . get job = 0 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | . initial setup = 20 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . payload setup = 24 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . stage-in = 0 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . payload execution = 50 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . stage-out = 0 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . log creation = 0 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | ..............................
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043553281/pilotlog.txt
[2026-03-12 18:43:12] 2026-03-13 01:42:35,021 | WARNING  | 
[2026-03-12 18:43:12] [begin log extracts]
[2026-03-12 18:43:12] - Log from pilotlog.txt -
[2026-03-12 18:43:12] 2026-03-13 01:42:34,999 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7043553281/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,000 | INFO     | extracted standard info from prmon json
[2026-03-12 18:43:12] 2026-03-13 01:42:35,000 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 18:43:12] 2026-03-13 01:42:35,000 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 18:43:12] 2026-03-13 01:42:35,000 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 18:43:12] 2026-03-13 01:42:35,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | WARNING  | wrong length of table data, x=[1773366004.0], y=[1665.0] (must be same and length>=4)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | ..............................
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | . Timing measurements:
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | . get job = 0 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,001 | INFO     | . initial setup = 20 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . payload setup = 24 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . stage-in = 0 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . payload execution = 50 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . stage-out = 0 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | . log creation = 0 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | ..............................
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 18:43:12] 2026-03-13 01:42:35,002 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043553281/pilotlog.txt
[2026-03-12 18:43:12] [end log extracts]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,022 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,023 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-12 18:43:12] 2026-03-13 01:42:35,110 | INFO     | 
[2026-03-12 18:43:12] 2026-03-13 01:42:35,110 | INFO     | job summary report
[2026-03-12 18:43:12] 2026-03-13 01:42:35,110 | INFO     | --------------------------------------------------
[2026-03-12 18:43:12] 2026-03-13 01:42:35,110 | INFO     | PanDA job id: 7043553281
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | task id: 48955010
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-12 18:40:27,972 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | pilot state: failed 
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | transexitcode: 65
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | exeerrorcode: 65
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | exitcode: 65
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | cpuconsumptiontime: 15 s
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | nevents: 0
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | neventsw: 0
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | pid: 4013609
[2026-03-12 18:43:12] 2026-03-13 01:42:35,111 | INFO     | pgrp: 4013609
[2026-03-12 18:43:12] 2026-03-13 01:42:35,112 | INFO     | corecount: 8
[2026-03-12 18:43:12] 2026-03-13 01:42:35,112 | INFO     | event service: False
[2026-03-12 18:43:12] 2026-03-13 01:42:35,112 | INFO     | sizes: {0: 2279743, 1: 2280204, 12: 2280204, 78: 2303555, 80: 2307875, 196: 2308013}
[2026-03-12 18:43:12] 2026-03-13 01:42:35,112 | INFO     | --------------------------------------------------
[2026-03-12 18:43:12] 2026-03-13 01:42:35,112 | INFO     | 
[2026-03-12 18:43:12] 2026-03-13 01:42:35,112 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-12 18:43:12] 2026-03-13 01:42:35,488 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,488 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,488 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,488 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,490 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,490 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,490 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 18:43:12] 2026-03-13 01:42:35,490 | INFO     | job 7043553281 has completed (purged errors)
[2026-03-12 18:43:12] 2026-03-13 01:42:35,490 | INFO     | overall cleanup function is called
[2026-03-12 18:43:12] 2026-03-13 01:42:36,520 | INFO     | --- collectZombieJob: --- 10, [4013609]
[2026-03-12 18:43:12] 2026-03-13 01:42:36,520 | INFO     | zombie collector waiting for pid 4013609
[2026-03-12 18:43:12] 2026-03-13 01:42:36,520 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 18:43:12] 2026-03-13 01:42:36,521 | INFO     | collected zombie processes
[2026-03-12 18:43:12] 2026-03-13 01:42:36,521 | INFO     | will attempt to kill all subprocesses of pid=4013609
[2026-03-12 18:43:12] 2026-03-13 01:42:36,911 | INFO     | process IDs to be killed: [4013609] (in reverse order)
[2026-03-12 18:43:12] 2026-03-13 01:42:37,257 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 18:43:12] 2026-03-13 01:42:37,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 18:43:12] 2026-03-13 01:42:37,322 | INFO     | did not find any defunct processes belonging to 4013609
[2026-03-12 18:43:12] 2026-03-13 01:42:37,374 | INFO     | did not find any defunct processes belonging to 4013609
[2026-03-12 18:43:12] 2026-03-13 01:42:37,374 | INFO     | ready for new job
[2026-03-12 18:43:12] 2026-03-13 01:42:37,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 18:43:12] 2026-03-13 01:42:37,387 | INFO     | **************************************
[2026-03-12 18:43:12] 2026-03-13 01:42:37,387 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 18:43:12] 2026-03-13 01:42:37,387 | INFO     | **************************************
[2026-03-12 18:43:12] 2026-03-13 01:42:37,387 | INFO     | 
[2026-03-12 18:43:12] 2026-03-13 01:42:37,389 | INFO     | architecture information:
[2026-03-12 18:43:12] 2026-03-13 01:42:37,409 | INFO     | executing command: cat /etc/os-release
[2026-03-12 18:43:12] 2026-03-13 01:42:37,489 | INFO     | cat /etc/os-release:
[2026-03-12 18:43:12] NAME="CentOS Linux"
[2026-03-12 18:43:12] VERSION="7 (Core)"
[2026-03-12 18:43:12] ID="centos"
[2026-03-12 18:43:12] ID_LIKE="rhel fedora"
[2026-03-12 18:43:12] VERSION_ID="7"
[2026-03-12 18:43:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 18:43:12] ANSI_COLOR="0;31"
[2026-03-12 18:43:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 18:43:12] HOME_URL="https://www.centos.org/"
[2026-03-12 18:43:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 18:43:12] 
[2026-03-12 18:43:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 18:43:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 18:43:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 18:43:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 18:43:12] 
[2026-03-12 18:43:12] 2026-03-13 01:42:37,490 | INFO     | **************************************
[2026-03-12 18:43:12] 2026-03-13 01:42:37,993 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-12 18:43:12] 2026-03-13 01:42:38,086 | INFO     | sufficient remaining disk space (1317237948416 B)
[2026-03-12 18:43:12] 2026-03-13 01:42:38,087 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 18:43:12] 2026-03-13 01:42:38,087 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 18:43:12] 2026-03-13 01:42:38,087 | INFO     | update_server=False
[2026-03-12 18:43:12] 2026-03-13 01:42:38,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 18:43:12] 2026-03-13 01:42:38,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 18:43:12] 2026-03-13 01:42:38,108 | INFO     | all payload control threads have been joined
[2026-03-12 18:43:12] 2026-03-13 01:42:38,376 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 18:43:12] 2026-03-13 01:42:38,422 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 18:43:12] 2026-03-13 01:42:38,422 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 18:43:12] 2026-03-13 01:42:38,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:43:12] 2026-03-13 01:42:38,422 | INFO     | will abort loop
[2026-03-12 18:43:12] 2026-03-13 01:42:38,552 | INFO     | all data control threads have been joined
[2026-03-12 18:43:12] 2026-03-13 01:42:39,043 | INFO     | all job control threads have been joined
[2026-03-12 18:43:12] 2026-03-13 01:42:39,092 | INFO     | [job] retrieve thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:39,114 | INFO     | [payload] control thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:39,126 | INFO     | [job] validate thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:39,338 | INFO     | [payload] validate_post thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:39,428 | INFO     | [job] job monitor thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:39,558 | INFO     | [data] control thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:39,663 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:40,049 | INFO     | [job] control thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:40,095 | INFO     | [data] copytool_out thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:40,135 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:43:12] 2026-03-13 01:42:40,169 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:40,180 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:40,332 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:40,449 | INFO     | [payload] failed_post thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:40,517 | INFO     | [data] copytool_in thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:41,141 | INFO     | [job] queue monitor thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:42:42,385 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 18:43:12] 2026-03-13 01:43:06,156 | INFO     | [monitor] cgroup control has ended
[2026-03-12 18:43:12] 2026-03-13 01:43:06,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730134505280)>', '<ExcThread(monitor, started 139729227994880)>']
[2026-03-12 18:43:12] 2026-03-13 01:43:08,027 | INFO     | PID=4007856 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 18:43:12] 2026-03-13 01:43:08,028 | INFO     | .. there are 33 such processes running
[2026-03-12 18:43:12] 2026-03-13 01:43:08,028 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 18:43:12] 2026-03-13 01:43:08,028 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 18:43:12] 2026-03-13 01:43:08,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 18:43:12] 2026-03-13 01:43:08,029 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 18:43:12] 2026-03-13 01:43:08,029 | INFO     | [monitor] control thread has ended
[2026-03-12 18:43:12] 2026-03-13 01:43:11,688 | INFO     | all workflow threads have been joined
[2026-03-12 18:43:12] 2026-03-13 01:43:11,688 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 18:43:12] 2026-03-13 01:43:11,689 | INFO     | traces error code: 0
[2026-03-12 18:43:12] 2026-03-13 01:43:11,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 18:43:12] 2026-03-13 01:43:11,944 [wrapper] ==== pilot stdout END ====
[2026-03-12 18:43:12] 2026-03-13 01:43:11,965 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 18:43:12] 2026-03-13 01:43:11,967 [wrapper] pilotpid: 4007856
[2026-03-12 18:43:12] 2026-03-13 01:43:11,969 [wrapper] Pilot exit status: 0
[2026-03-12 18:43:12] 2026-03-13 01:43:11,978 [wrapper] pandaids: 7043553281
[2026-03-12 18:43:12] 2026-03-13 01:43:12,140 [wrapper] cleanup supervisor_pilot 4007862 4007857
[2026-03-12 18:43:12] 2026-03-13 01:43:12,158 [wrapper] Test setup, not cleaning
[2026-03-12 18:43:12] 2026-03-13 01:43:12,198 [wrapper] apfmon messages muted
[2026-03-12 18:43:12] 2026-03-13 01:43:12,257 [wrapper] ==== wrapper stdout END ====
[2026-03-12 18:43:12] 2026-03-13 01:43:12,275 [wrapper] ==== wrapper stderr END ====
[2026-03-12 18:43:12]  *** Error codes and diagnostics ***
[2026-03-12 18:43:12]     "exeErrorCode": 65,
[2026-03-12 18:43:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 18:43:12]     "pilotErrorCode": 1305,
[2026-03-12 18:43:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 18:43:12]  *** Listing of results directory ***
[2026-03-12 18:43:12] total 440852
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc      5111 Mar 12 12:59 queuedata.json
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc    585013 Mar 12 12:59 pilot3.tar.gz
[2026-03-12 18:43:12] -rwx------. 1 boinc boinc     36322 Mar 12 12:59 runpilot2-wrapper.sh
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc       100 Mar 12 18:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 18:43:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 18:38 run_atlas
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc       105 Mar 12 18:38 job.xml
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc      6444 Mar 12 18:38 init_data.xml
[2026-03-12 18:43:12] -rw-r--r--. 2 boinc boinc 447287068 Mar 12 18:38 EVNT.46701403._001496.pool.root.1
[2026-03-12 18:43:12] -rw-r--r--. 2 boinc boinc    597526 Mar 12 18:38 input.tar.gz
[2026-03-12 18:43:12] -rw-r--r--. 2 boinc boinc     15845 Mar 12 18:38 start_atlas.sh
[2026-03-12 18:43:12] drwxrwx--x. 2 boinc boinc      4096 Mar 12 18:38 shared
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc         0 Mar 12 18:38 boinc_lockfile
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc      2563 Mar 12 18:38 pandaJob.out
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc   1006514 Mar 12 18:38 agis_schedconf.cvmfs.json
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc   1511578 Mar 12 18:38 agis_ddmendpoints.agis.ALL.json
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc       442 Mar 12 18:39 workernode_map.json
[2026-03-12 18:43:12] drwx------. 5 boinc boinc      4096 Mar 12 18:39 pilot3
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc       524 Mar 12 18:40 boinc_task_state.xml
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc       952 Mar 12 18:40 memory_monitor_summary.json
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc     22105 Mar 12 18:40 log.48955010._025102.job.log.tgz.1
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc      7049 Mar 12 18:42 heartbeat.json
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc        95 Mar 12 18:43 pilot_heartbeat.json
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc      8192 Mar 12 18:43 boinc_mmap_file
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc        23 Mar 12 18:43 wrapper_checkpoint.txt
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc      5005 Mar 12 18:43 pilotlog.txt
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc     86796 Mar 12 18:43 log.48955010._025102.job.log.1
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc       188 Mar 12 18:43 output.list
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc       620 Mar 12 18:43 runtime_log
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc    122880 Mar 12 18:43 result.tar.gz
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc      8633 Mar 12 18:43 runtime_log.err
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc       644 Mar 12 18:43 kVyKDmUN1K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwenLDmR13Lgn.diag
[2026-03-12 18:43:12] -rw-r--r--. 1 boinc boinc     21792 Mar 12 18:43 stderr.txt
[2026-03-12 18:43:12] No HITS result produced
[2026-03-12 18:43:12]  *** Contents of shared directory: ***
[2026-03-12 18:43:12] total 437528
[2026-03-12 18:43:12] -rw-r--r--. 2 boinc boinc 447287068 Mar 12 18:38 ATLAS.root_0
[2026-03-12 18:43:12] -rw-r--r--. 2 boinc boinc    597526 Mar 12 18:38 input.tar.gz
[2026-03-12 18:43:12] -rw-r--r--. 2 boinc boinc     15845 Mar 12 18:38 start_atlas.sh
[2026-03-12 18:43:12] -rw-------. 1 boinc boinc    122880 Mar 12 18:43 result.tar.gz
18:43:14 (4004125): run_atlas exited; CPU time 22.904087
18:43:14 (4004125): called boinc_finish(0)

</stderr_txt>
]]>

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