Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:21:59 (368448): wrapper (7.7.26015): starting
18:21:59 (368448): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 18:21:59] Arguments: --nthreads 12
[2026-03-12 18:21:59] Threads: 12
[2026-03-12 18:21:59] Checking for CVMFS
[2026-03-12 18:22:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 18:22:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 18:22:00] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 18:22:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 18:22:00] 2.11.5.0 3990553 146620 237328 157222 3 11 38818067 45568000 24283 130560 0 1265262190 99.816 689153005 21943 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-03-12 18:22:00] CVMFS is ok
[2026-03-12 18:22:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 18:22:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 18:22:00] Further information can be found at the LHC@home message board.
[2026-03-12 18:22:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 18:22:00] Checking for apptainer binary...
[2026-03-12 18:22:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 18:22:00] Running /usr/bin/apptainer --version
[2026-03-12 18:22:00] apptainer version 1.4.1-1.el9
[2026-03-12 18:22:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 18:22:01] wns0082.triumf.lcg
[2026-03-12 18:22:01] apptainer works
[2026-03-12 18:22:01] Set ATHENA_PROC_NUMBER=12
[2026-03-12 18:22:01] Set ATHENA_CORE_NUMBER=12
[2026-03-12 18:22:01] Starting ATLAS job with PandaID=7043553152
[2026-03-12 18:22:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 18:27:05]  *** The last 200 lines of the pilot log: ***
[2026-03-12 18:27:05] 2026-03-13 01:26:46,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 18:27:05] 2026-03-13 01:26:46,517 | WARNING  | wrong length of table data, x=[1773365041.0], y=[946.0] (must be same and length>=4)
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | could have reported an average CPU frequency of 2710 MHz (4 samples)
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | ..............................
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . Timing measurements:
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . get job = 0 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . initial setup = 27 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . payload setup = 36 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . stage-in = 0 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . payload execution = 66 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . stage-out = 1 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . log creation = 0 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | ..............................
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043553152/pilotlog.txt
[2026-03-12 18:27:05] 2026-03-13 01:26:46,698 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-12 18:27:05] - Log from pilotlog.txt -
[2026-03-12 18:27:05] 2026-03-13 01:26:46,516 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7043553152/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 18:27:05] 2026-03-13 01:26:46,516 | INFO     | extracted standard info from prmon json
[2026-03-12 18:27:05] 2026-03-13 01:26:46,517 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 18:27:05] 2026-03-13 01:26:46,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 18:27:05] 2026-03-13 01:26:46,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 18:27:05] 2026-03-13 01:26:46,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 18:27:05] 2026-03-13 01:26:46,517 | WARNING  | wrong length of table data, x=[1773365041.0], y=[946.0] (must be same and length>=4)
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | could have reported an average CPU frequency of 2710 MHz (4 samples)
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | ..............................
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . Timing measurements:
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . get job = 0 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . initial setup = 27 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . payload setup = 36 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . stage-in = 0 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . payload execution = 66 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . stage-out = 1 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . log creation = 0 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | ..............................
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043553152/pilotlog.txt
[2026-03-12 18:27:05] 2026-03-13 01:26:46,698 | WARNING  | 
[2026-03-12 18:27:05] [begin log extracts]
[2026-03-12 18:27:05] - Log from pilotlog.txt -
[2026-03-12 18:27:05] 2026-03-13 01:26:46,516 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7043553152/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 18:27:05] 2026-03-13 01:26:46,516 | INFO     | extracted standard info from prmon json
[2026-03-12 18:27:05] 2026-03-13 01:26:46,517 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 18:27:05] 2026-03-13 01:26:46,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 18:27:05] 2026-03-13 01:26:46,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 18:27:05] 2026-03-13 01:26:46,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 18:27:05] 2026-03-13 01:26:46,517 | WARNING  | wrong length of table data, x=[1773365041.0], y=[946.0] (must be same and length>=4)
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | could have reported an average CPU frequency of 2710 MHz (4 samples)
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | ..............................
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . Timing measurements:
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . get job = 0 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . initial setup = 27 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . payload setup = 36 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . stage-in = 0 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . payload execution = 66 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . stage-out = 1 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | . log creation = 0 s
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | ..............................
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-12 18:27:05] 2026-03-13 01:26:46,518 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043553152/pilotlog.txt
[2026-03-12 18:27:05] [end log extracts]
[2026-03-12 18:27:05] 2026-03-13 01:26:46,698 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-12 18:27:05] 2026-03-13 01:26:46,699 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-12 18:27:05] 2026-03-13 01:26:46,836 | INFO     | time since job start (227s) is within the limit (345600.0s)
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | 
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | job summary report
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | --------------------------------------------------
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | PanDA job id: 7043553152
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | task id: 48955010
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-12 18:24:36,469 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | pilot state: failed 
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | transexitcode: 65
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | exeerrorcode: 65
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | exitcode: 65
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | cpuconsumptiontime: 15 s
[2026-03-12 18:27:05] 2026-03-13 01:26:47,137 | INFO     | nevents: 0
[2026-03-12 18:27:05] 2026-03-13 01:26:47,138 | INFO     | neventsw: 0
[2026-03-12 18:27:05] 2026-03-13 01:26:47,138 | INFO     | pid: 376958
[2026-03-12 18:27:05] 2026-03-13 01:26:47,138 | INFO     | pgrp: 376958
[2026-03-12 18:27:05] 2026-03-13 01:26:47,138 | INFO     | corecount: 12
[2026-03-12 18:27:05] 2026-03-13 01:26:47,138 | INFO     | event service: False
[2026-03-12 18:27:05] 2026-03-13 01:26:47,138 | INFO     | sizes: {0: 2279800, 1: 2280176, 2: 2280204, 106: 2303446, 107: 2303422, 108: 2307742, 109: 2307898, 226: 2308092}
[2026-03-12 18:27:05] 2026-03-13 01:26:47,138 | INFO     | --------------------------------------------------
[2026-03-12 18:27:05] 2026-03-13 01:26:47,138 | INFO     | 
[2026-03-12 18:27:05] 2026-03-13 01:26:47,138 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-12 18:27:05] 2026-03-13 01:26:47,178 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,179 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,180 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 18:27:05] 2026-03-13 01:26:47,180 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,180 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 18:27:05] 2026-03-13 01:26:47,180 | INFO     | job 7043553152 has completed (purged errors)
[2026-03-12 18:27:05] 2026-03-13 01:26:47,180 | INFO     | overall cleanup function is called
[2026-03-12 18:27:05] 2026-03-13 01:26:48,219 | INFO     | --- collectZombieJob: --- 10, [376958]
[2026-03-12 18:27:05] 2026-03-13 01:26:48,219 | INFO     | zombie collector waiting for pid 376958
[2026-03-12 18:27:05] 2026-03-13 01:26:48,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 18:27:05] 2026-03-13 01:26:48,219 | INFO     | collected zombie processes
[2026-03-12 18:27:05] 2026-03-13 01:26:48,219 | INFO     | will attempt to kill all subprocesses of pid=376958
[2026-03-12 18:27:05] 2026-03-13 01:26:48,706 | INFO     | PID=372182 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 18:27:05] 2026-03-13 01:26:48,707 | INFO     | .. there are 35 such processes running
[2026-03-12 18:27:05] 2026-03-13 01:26:48,776 | INFO     | process IDs to be killed: [376958] (in reverse order)
[2026-03-12 18:27:05] 2026-03-13 01:26:48,893 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 18:27:05] 2026-03-13 01:26:48,893 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 18:27:05] 2026-03-13 01:26:48,903 | INFO     | did not find any defunct processes belonging to 376958
[2026-03-12 18:27:05] 2026-03-13 01:26:48,924 | INFO     | did not find any defunct processes belonging to 376958
[2026-03-12 18:27:05] 2026-03-13 01:26:48,925 | INFO     | ready for new job
[2026-03-12 18:27:05] 2026-03-13 01:26:48,925 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 18:27:05] 2026-03-13 01:26:48,926 | INFO     | **************************************
[2026-03-12 18:27:05] 2026-03-13 01:26:48,926 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 18:27:05] 2026-03-13 01:26:48,926 | INFO     | **************************************
[2026-03-12 18:27:05] 2026-03-13 01:26:48,926 | INFO     | 
[2026-03-12 18:27:05] 2026-03-13 01:26:48,928 | INFO     | architecture information:
[2026-03-12 18:27:05] 2026-03-13 01:26:48,932 | INFO     | executing command: cat /etc/os-release
[2026-03-12 18:27:05] 2026-03-13 01:26:49,048 | INFO     | cat /etc/os-release:
[2026-03-12 18:27:05] NAME="CentOS Linux"
[2026-03-12 18:27:05] VERSION="7 (Core)"
[2026-03-12 18:27:05] ID="centos"
[2026-03-12 18:27:05] ID_LIKE="rhel fedora"
[2026-03-12 18:27:05] VERSION_ID="7"
[2026-03-12 18:27:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 18:27:05] ANSI_COLOR="0;31"
[2026-03-12 18:27:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 18:27:05] HOME_URL="https://www.centos.org/"
[2026-03-12 18:27:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 18:27:05] 
[2026-03-12 18:27:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 18:27:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 18:27:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 18:27:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 18:27:05] 
[2026-03-12 18:27:05] 2026-03-13 01:26:49,048 | INFO     | **************************************
[2026-03-12 18:27:05] 2026-03-13 01:26:49,552 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-12 18:27:05] 2026-03-13 01:26:49,631 | INFO     | sufficient remaining disk space (2071555211264 B)
[2026-03-12 18:27:05] 2026-03-13 01:26:49,631 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 18:27:05] 2026-03-13 01:26:49,632 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 18:27:05] 2026-03-13 01:26:49,632 | INFO     | update_server=False
[2026-03-12 18:27:05] 2026-03-13 01:26:49,632 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 18:27:05] 2026-03-13 01:26:49,632 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:27:05] 2026-03-13 01:26:49,632 | INFO     | aborting loop
[2026-03-12 18:27:05] 2026-03-13 01:26:49,632 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-12 18:27:05] 2026-03-13 01:26:49,632 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 18:27:05] 2026-03-13 01:26:49,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 18:27:05] 2026-03-13 01:26:49,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 18:27:05] 2026-03-13 01:26:49,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 18:27:05] 2026-03-13 01:26:50,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 18:27:05] 2026-03-13 01:26:50,340 | INFO     | all job control threads have been joined
[2026-03-12 18:27:05] 2026-03-13 01:26:50,451 | INFO     | all data control threads have been joined
[2026-03-12 18:27:05] 2026-03-13 01:26:50,647 | INFO     | [job] retrieve thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:50,647 | INFO     | [job] job monitor thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:50,828 | INFO     | all payload control threads have been joined
[2026-03-12 18:27:05] 2026-03-13 01:26:50,952 | INFO     | [job] validate thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:50,955 | INFO     | [payload] failed_post thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:51,313 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:51,346 | INFO     | [job] control thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:51,474 | INFO     | [data] control thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:51,597 | INFO     | [data] copytool_in thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:51,618 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:51,620 | INFO     | [payload] validate_post thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:51,637 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:51,834 | INFO     | [payload] control thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:51,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:27:05] 2026-03-13 01:26:51,976 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:52,356 | INFO     | [data] copytool_out thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:52,959 | INFO     | [job] queue monitor thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:53,644 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 18:27:05] 2026-03-13 01:26:58,810 | INFO     | [monitor] cgroup control has ended
[2026-03-12 18:27:05] 2026-03-13 01:26:59,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140688775759680)>', '<ExcThread(monitor, started 140688054265600)>']
[2026-03-12 18:27:05] 2026-03-13 01:26:59,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 18:27:05] 2026-03-13 01:26:59,705 | INFO     | [monitor] control thread has ended
[2026-03-12 18:27:05] 2026-03-13 01:27:04,356 | INFO     | all workflow threads have been joined
[2026-03-12 18:27:05] 2026-03-13 01:27:04,356 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 18:27:05] 2026-03-13 01:27:04,356 | INFO     | traces error code: 0
[2026-03-12 18:27:05] 2026-03-13 01:27:04,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 18:27:05] 2026-03-13 01:27:04,758 [wrapper] ==== pilot stdout END ====
[2026-03-12 18:27:05] 2026-03-13 01:27:04,761 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 18:27:05] 2026-03-13 01:27:04,763 [wrapper] pilotpid: 372182
[2026-03-12 18:27:05] 2026-03-13 01:27:04,766 [wrapper] Pilot exit status: 0
[2026-03-12 18:27:05] 2026-03-13 01:27:04,817 [wrapper] pandaids: 7043553152
[2026-03-12 18:27:05] 2026-03-13 01:27:05,026 [wrapper] cleanup supervisor_pilot  372188 372183
[2026-03-12 18:27:05] 2026-03-13 01:27:05,030 [wrapper] Test setup, not cleaning
[2026-03-12 18:27:05] 2026-03-13 01:27:05,044 [wrapper] apfmon messages muted
[2026-03-12 18:27:05] 2026-03-13 01:27:05,059 [wrapper] ==== wrapper stdout END ====
[2026-03-12 18:27:05] 2026-03-13 01:27:05,062 [wrapper] ==== wrapper stderr END ====
[2026-03-12 18:27:05]  *** Error codes and diagnostics ***
[2026-03-12 18:27:05]     "exeErrorCode": 65,
[2026-03-12 18:27:05]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 18:27:05]     "pilotErrorCode": 1305,
[2026-03-12 18:27:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-12 18:27:05]  *** Listing of results directory ***
[2026-03-12 18:27:05] total 431120
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc      5111 Mar 12 12:59 queuedata.json
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc    585013 Mar 12 12:59 pilot3.tar.gz
[2026-03-12 18:27:05] -rwx------. 1 boinc boinc     36322 Mar 12 12:59 runpilot2-wrapper.sh
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc       100 Mar 12 18:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 18:27:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 18:21 run_atlas
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc       105 Mar 12 18:21 job.xml
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc      6594 Mar 12 18:21 init_data.xml
[2026-03-12 18:27:05] -rw-r--r--. 2 boinc boinc 437306506 Mar 12 18:21 EVNT.46701403._001493.pool.root.1
[2026-03-12 18:27:05] -rw-r--r--. 2 boinc boinc     15845 Mar 12 18:21 start_atlas.sh
[2026-03-12 18:27:05] drwxrwx--x. 2 boinc boinc      4096 Mar 12 18:21 shared
[2026-03-12 18:27:05] -rw-r--r--. 2 boinc boinc    597526 Mar 12 18:21 input.tar.gz
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc         0 Mar 12 18:21 boinc_lockfile
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc      2563 Mar 12 18:22 pandaJob.out
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc   1006514 Mar 12 18:22 agis_schedconf.cvmfs.json
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc   1511578 Mar 12 18:22 agis_ddmendpoints.agis.ALL.json
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc       444 Mar 12 18:22 workernode_map.json
[2026-03-12 18:27:05] drwx------. 5 boinc boinc      4096 Mar 12 18:22 pilot3
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc       523 Mar 12 18:24 boinc_task_state.xml
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc       959 Mar 12 18:24 memory_monitor_summary.json
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc     21917 Mar 12 18:24 log.48955010._024973.job.log.tgz.1
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc        95 Mar 12 18:26 pilot_heartbeat.json
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc      7027 Mar 12 18:26 heartbeat.json
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc        22 Mar 12 18:27 wrapper_checkpoint.txt
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc      8192 Mar 12 18:27 boinc_mmap_file
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc      4547 Mar 12 18:27 pilotlog.txt
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc     88853 Mar 12 18:27 log.48955010._024973.job.log.1
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc       188 Mar 12 18:27 output.list
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc       620 Mar 12 18:27 runtime_log
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc    133120 Mar 12 18:27 result.tar.gz
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc      8635 Mar 12 18:27 runtime_log.err
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc       646 Mar 12 18:27 h9ULDmTN1K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXdnLDmQSTqcn.diag
[2026-03-12 18:27:05] -rw-r--r--. 1 boinc boinc     21845 Mar 12 18:27 stderr.txt
[2026-03-12 18:27:05] No HITS result produced
[2026-03-12 18:27:05]  *** Contents of shared directory: ***
[2026-03-12 18:27:05] total 427796
[2026-03-12 18:27:05] -rw-r--r--. 2 boinc boinc 437306506 Mar 12 18:21 ATLAS.root_0
[2026-03-12 18:27:05] -rw-r--r--. 2 boinc boinc     15845 Mar 12 18:21 start_atlas.sh
[2026-03-12 18:27:05] -rw-r--r--. 2 boinc boinc    597526 Mar 12 18:21 input.tar.gz
[2026-03-12 18:27:05] -rw-------. 1 boinc boinc    133120 Mar 12 18:27 result.tar.gz
18:27:06 (368448): run_atlas exited; CPU time 22.836085
18:27:06 (368448): called boinc_finish(0)

</stderr_txt>
]]>

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