Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:09:46 (540292): wrapper (7.7.26015): starting
10:09:46 (540292): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 10:09:46] Arguments: --nthreads 4
[2026-03-14 10:09:46] Threads: 4
[2026-03-14 10:09:46] Checking for CVMFS
[2026-03-14 10:09:46] No cvmfs_config command found, will try listing directly
[2026-03-14 10:09:46] CVMFS is ok
[2026-03-14 10:09:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 10:09:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 10:09:46] Further information can be found at the LHC@home message board.
[2026-03-14 10:09:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 10:09:46] Checking for apptainer binary...
[2026-03-14 10:09:46] which: no apptainer in ((null))
[2026-03-14 10:09:46] apptainer is not installed, using version from CVMFS
[2026-03-14 10:09:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 10:09:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot228/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-14 10:09:47] apptainer works
[2026-03-14 10:09:47] Set ATHENA_PROC_NUMBER=4
[2026-03-14 10:09:47] Set ATHENA_CORE_NUMBER=4
[2026-03-14 10:09:47] Starting ATLAS job with PandaID=7051817187
[2026-03-14 10:09:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot228/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 12:05:46]  *** The last 200 lines of the pilot log: ***
[2026-03-14 12:05:46]  storage_token=
[2026-03-14 12:05:46]  surl=/var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7051817187/log.48967030._004864.job.log.tgz.1
[2026-03-14 12:05:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/7a/log.48967030._004864.job.log.tgz.1
[2026-03-14 12:05:46]  workdir=None
[2026-03-14 12:05:46] ]
[2026-03-14 12:05:46] 2026-03-14 10:48:08,034 | INFO     | transferring file log.48967030._004864.job.log.tgz.1 from /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7051817187/log.48967030._004864.job.log.tgz.1 to /var/lib/
[2026-03-14 12:05:46] 2026-03-14 10:48:08,034 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7051817187/log.48967030._004864.job.log.tgz.1 /var/lib/boinc/var/slot228/slots/0/
[2026-03-14 12:05:46] 2026-03-14 10:48:08,051 | INFO     | adding to output.list: log.48967030._004864.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/7a/log.48967030._004864.job.log.tg
[2026-03-14 12:05:46] 2026-03-14 10:48:08,052 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 12:05:46] 2026-03-14 10:48:08,052 | INFO     | summary of transferred files:
[2026-03-14 12:05:46] 2026-03-14 10:48:08,052 | INFO     |  -- lfn=log.48967030._004864.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 12:05:46] 2026-03-14 10:48:08,052 | INFO     | stage-out finished correctly
[2026-03-14 12:05:46] 2026-03-14 10:48:09,027 | INFO     | time since job start (5888s) is within the limit (345600.0s)
[2026-03-14 12:05:46] 2026-03-14 10:48:10,425 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 12:05:46] 2026-03-14 10:48:11,032 | INFO     | time since job start (5890s) is within the limit (345600.0s)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,037 | INFO     | time since job start (5892s) is within the limit (345600.0s)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,136 | INFO     | job 7051817187 has state=finished
[2026-03-14 12:05:46] 2026-03-14 10:48:13,136 | INFO     | preparing for final server update for job 7051817187 in state='finished'
[2026-03-14 12:05:46] 2026-03-14 10:48:13,137 | INFO     | reading metadata from: /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7051817187/jobReport.json
[2026-03-14 12:05:46] 2026-03-14 10:48:13,139 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot228/slots/0/workernode_map.json
[2026-03-14 12:05:46] 2026-03-14 10:48:13,140 | INFO     | this job has now completed (state=finished)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,140 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,140 | INFO     | log transfer has been attempted: DONE
[2026-03-14 12:05:46] 2026-03-14 10:48:13,140 | INFO     | job 7051817187 has finished - writing final server update
[2026-03-14 12:05:46] 2026-03-14 10:48:13,140 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2513528/.job.ad'
[2026-03-14 12:05:46] 2026-03-14 10:48:13,140 | INFO     | total number of processed events: 400 (read)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,164 | INFO     | using path: /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7051817187/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,165 | INFO     | extracted standard info from prmon json
[2026-03-14 12:05:46] 2026-03-14 10:48:13,166 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 12:05:46] 2026-03-14 10:48:13,166 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 12:05:46] 2026-03-14 10:48:13,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 12:05:46] 2026-03-14 10:48:13,166 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 12:05:46] 2026-03-14 10:48:13,167 | INFO     | fitting pss+swap vs Time
[2026-03-14 12:05:46] 2026-03-14 10:48:13,167 | INFO     | sum of square deviations: 226022842.5
[2026-03-14 12:05:46] 2026-03-14 10:48:13,168 | INFO     | sum of deviations: 1311790268.5
[2026-03-14 12:05:46] 2026-03-14 10:48:13,168 | INFO     | mean x: 1773482443.5
[2026-03-14 12:05:46] 2026-03-14 10:48:13,168 | INFO     | mean y: 2313197.5444444446
[2026-03-14 12:05:46] 2026-03-14 10:48:13,168 | INFO     | intersect: -10290615539.244188
[2026-03-14 12:05:46] 2026-03-14 10:48:13,168 | INFO     | chi2: 0.000340765914297106
[2026-03-14 12:05:46] 2026-03-14 10:48:13,168 | INFO     | current memory leak: 5.80 B/s (using 90 data points, chi2=0.00)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,168 | INFO     | could have reported an average CPU frequency of 3574 MHz (7 samples)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,168 | INFO     | ..............................
[2026-03-14 12:05:46] 2026-03-14 10:48:13,168 | INFO     | . Timing measurements:
[2026-03-14 12:05:46] 2026-03-14 10:48:13,169 | INFO     | . get job = 0 s
[2026-03-14 12:05:46] 2026-03-14 10:48:13,169 | INFO     | . initial setup = 5 s
[2026-03-14 12:05:46] 2026-03-14 10:48:13,169 | INFO     | . payload setup = 5 s
[2026-03-14 12:05:46] 2026-03-14 10:48:13,169 | INFO     | . stage-in = 0 s
[2026-03-14 12:05:46] 2026-03-14 10:48:13,169 | INFO     | . payload execution = 5865 s
[2026-03-14 12:05:46] 2026-03-14 10:48:13,169 | INFO     | . stage-out = 0 s
[2026-03-14 12:05:46] 2026-03-14 10:48:13,169 | INFO     | . log creation = 0 s
[2026-03-14 12:05:46] 2026-03-14 10:48:13,169 | INFO     | ..............................
[2026-03-14 12:05:46] 2026-03-14 10:48:13,313 | INFO     | 
[2026-03-14 12:05:46] 2026-03-14 10:48:13,313 | INFO     | job summary report
[2026-03-14 12:05:46] 2026-03-14 10:48:13,313 | INFO     | --------------------------------------------------
[2026-03-14 12:05:46] 2026-03-14 10:48:13,313 | INFO     | PanDA job id: 7051817187
[2026-03-14 12:05:46] 2026-03-14 10:48:13,313 | INFO     | task id: 48967030
[2026-03-14 12:05:46] 2026-03-14 10:48:13,313 | INFO     | errors: (none)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,313 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | pilot state: finished 
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | transexitcode: 0
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | exeerrorcode: 0
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | exeerrordiag: 
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | exitcode: 0
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | exitmsg: OK
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | cpuconsumptiontime: 22550 s
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | nevents: 400
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | neventsw: 0
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | pid: 579484
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | pgrp: 579484
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | corecount: 4
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | event service: False
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | sizes: {0: 2280254, 11: 2280254, 5874: 2307013, 5875: 2316035, 5877: 2316091, 5880: 2316285}
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | --------------------------------------------------
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | 
[2026-03-14 12:05:46] 2026-03-14 10:48:13,314 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot228/slots/0
[2026-03-14 12:05:46] 2026-03-14 10:48:13,335 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,335 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,335 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,335 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | job 7051817187 has completed (purged errors)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,336 | INFO     | overall cleanup function is called
[2026-03-14 12:05:46] 2026-03-14 10:48:13,435 | WARNING  | process 579484 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 12:05:46] 2026-03-14 10:48:13,768 | INFO     | using path: /var/lib/boinc/var/slot228/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,768 | INFO     | using path: /var/lib/boinc/var/slot228/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,769 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 12:05:46] 2026-03-14 10:48:13,769 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 12:05:46] 2026-03-14 10:48:13,769 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7051817187/payload.stdout) since it has not been created yet
[2026-03-14 12:05:46] 2026-03-14 10:48:13,769 | INFO     | executing command: df -mP /var/lib/boinc/var/slot228/slots/0
[2026-03-14 12:05:46] 2026-03-14 10:48:13,786 | INFO     | sufficient remaining disk space (20599275520 B)
[2026-03-14 12:05:46] 2026-03-14 10:48:13,786 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 12:05:46] 2026-03-14 10:48:13,787 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7051817187/HITS.48967030._004864.pool.root.1 since it does not exist
[2026-03-14 12:05:46] 2026-03-14 10:48:14,261 | INFO     | number of running child processes to parent process 579484: 1
[2026-03-14 12:05:46] 2026-03-14 10:48:14,261 | INFO     | maximum number of monitored processes: 6
[2026-03-14 12:05:46] 2026-03-14 10:48:14,261 | INFO     | aborting job monitoring since job object (job id=7051817187) has expired
[2026-03-14 12:05:46] 2026-03-14 10:48:14,344 | INFO     | --- collectZombieJob: --- 10, [579484]
[2026-03-14 12:05:46] 2026-03-14 10:48:14,344 | INFO     | zombie collector waiting for pid 579484
[2026-03-14 12:05:46] 2026-03-14 10:48:14,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 12:05:46] 2026-03-14 10:48:14,344 | INFO     | collected zombie processes
[2026-03-14 12:05:46] 2026-03-14 10:48:14,344 | INFO     | will attempt to kill all subprocesses of pid=579484
[2026-03-14 12:05:46] 2026-03-14 10:48:14,795 | INFO     | process IDs to be killed: [579484] (in reverse order)
[2026-03-14 12:05:46] 2026-03-14 10:48:15,011 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 12:05:46] 2026-03-14 10:48:15,011 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 12:05:46] 2026-03-14 10:48:15,042 | INFO     | did not find any defunct processes belonging to 579484
[2026-03-14 12:05:46] 2026-03-14 10:48:15,075 | INFO     | did not find any defunct processes belonging to 579484
[2026-03-14 12:05:46] 2026-03-14 10:48:15,075 | INFO     | ready for new job
[2026-03-14 12:05:46] 2026-03-14 10:48:15,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 12:05:46] 2026-03-14 10:48:15,076 | INFO     | **************************************
[2026-03-14 12:05:46] 2026-03-14 10:48:15,076 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 12:05:46] 2026-03-14 10:48:15,076 | INFO     | **************************************
[2026-03-14 12:05:46] 2026-03-14 10:48:15,076 | INFO     | 
[2026-03-14 12:05:46] 2026-03-14 10:48:15,083 | INFO     | architecture information:
[2026-03-14 12:05:46] 2026-03-14 10:48:15,083 | INFO     | executing command: cat /etc/os-release
[2026-03-14 12:05:46] 2026-03-14 10:48:15,098 | INFO     | cat /etc/os-release:
[2026-03-14 12:05:46] NAME="CentOS Linux"
[2026-03-14 12:05:46] VERSION="7 (Core)"
[2026-03-14 12:05:46] ID="centos"
[2026-03-14 12:05:46] ID_LIKE="rhel fedora"
[2026-03-14 12:05:46] VERSION_ID="7"
[2026-03-14 12:05:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 12:05:46] ANSI_COLOR="0;31"
[2026-03-14 12:05:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 12:05:46] HOME_URL="https://www.centos.org/"
[2026-03-14 12:05:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 12:05:46] 
[2026-03-14 12:05:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 12:05:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 12:05:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 12:05:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 12:05:46] 
[2026-03-14 12:05:46] 2026-03-14 10:48:15,098 | INFO     | **************************************
[2026-03-14 12:05:46] 2026-03-14 10:48:15,601 | INFO     | executing command: df -mP /var/lib/boinc/var/slot228/slots/0
[2026-03-14 12:05:46] 2026-03-14 10:48:15,617 | INFO     | sufficient remaining disk space (20594032640 B)
[2026-03-14 12:05:46] 2026-03-14 10:48:15,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 12:05:46] 2026-03-14 10:48:15,618 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 12:05:46] 2026-03-14 10:48:15,618 | INFO     | update_server=False
[2026-03-14 12:05:46] 2026-03-14 10:48:15,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 12:05:46] 2026-03-14 10:48:15,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:05:46] 2026-03-14 10:48:15,618 | INFO     | aborting loop
[2026-03-14 12:05:46] 2026-03-14 10:48:15,766 | INFO     | all job control threads have been joined
[2026-03-14 12:05:46] 2026-03-14 10:48:16,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 12:05:46] 2026-03-14 10:48:16,357 | INFO     | all data control threads have been joined
[2026-03-14 12:05:46] 2026-03-14 10:48:16,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 12:05:46] 2026-03-14 10:48:16,548 | INFO     | all payload control threads have been joined
[2026-03-14 12:05:46] 2026-03-14 10:48:16,623 | INFO     | [job] retrieve thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:16,624 | INFO     | [job] job monitor thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:16,731 | INFO     | [payload] failed_post thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:16,771 | INFO     | [job] control thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:17,229 | INFO     | [job] validate thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:17,361 | INFO     | [data] control thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:17,385 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:17,544 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:17,545 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:17,554 | INFO     | [payload] control thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:17,564 | INFO     | [data] copytool_in thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:18,120 | INFO     | [data] copytool_out thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:18,142 | INFO     | [payload] validate_post thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:18,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:05:46] 2026-03-14 10:48:19,232 | INFO     | [job] queue monitor thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:20,488 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:26,564 | INFO     | job.realtimelogging is not enabled
[2026-03-14 12:05:46] 2026-03-14 10:48:27,570 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 12:05:46] 2026-03-14 10:48:46,687 | INFO     | PID=556229 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 12:05:46] 2026-03-14 10:48:46,687 | INFO     | .. there are 40 such processes running
[2026-03-14 12:05:46] 2026-03-14 10:48:46,688 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 12:05:46] 2026-03-14 10:48:46,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 12:05:46] 2026-03-14 10:48:46,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 12:05:46] 2026-03-14 10:49:11,080 | INFO     | [monitor] cgroup control has ended
[2026-03-14 12:05:46] 2026-03-14 10:49:11,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23033958799168)>', '<ExcThread(monitor, started 23033713788672)>']
[2026-03-14 12:05:46] 2026-03-14 10:49:11,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 12:05:46] 2026-03-14 10:49:11,796 | INFO     | [monitor] control thread has ended
[2026-03-14 12:05:46] 2026-03-14 10:49:16,136 | INFO     | all workflow threads have been joined
[2026-03-14 12:05:46] 2026-03-14 10:49:16,137 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 12:05:46] 2026-03-14 10:49:16,137 | INFO     | traces error code: 0
[2026-03-14 12:05:46] 2026-03-14 10:49:16,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 12:05:46] 2026-03-14 10:49:16,352 [wrapper] ==== pilot stdout END ====
[2026-03-14 12:05:46] 2026-03-14 10:49:16,354 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 12:05:46] 2026-03-14 10:49:16,355 [wrapper] pilotpid: 556229
[2026-03-14 12:05:46] 2026-03-14 10:49:16,357 [wrapper] Pilot exit status: 0
[2026-03-14 12:05:46] 2026-03-14 10:49:16,362 [wrapper] pandaids: 7051817187
[2026-03-14 12:05:46] 2026-03-14 10:49:16,492 [wrapper] cleanup supervisor_pilot 1246658 556231
[2026-03-14 12:05:46] 2026-03-14 10:49:16,495 [wrapper] Test setup, not cleaning
[2026-03-14 12:05:46] 2026-03-14 10:49:16,496 [wrapper] apfmon messages muted
[2026-03-14 12:05:46] 2026-03-14 10:49:16,499 [wrapper] ==== wrapper stdout END ====
[2026-03-14 12:05:46] 2026-03-14 10:49:16,501 [wrapper] ==== wrapper stderr END ====
[2026-03-14 12:05:46]  *** Error codes and diagnostics ***
[2026-03-14 12:05:46]     "exeErrorCode": 0,
[2026-03-14 12:05:46]     "exeErrorDiag": "",
[2026-03-14 12:05:46]     "pilotErrorCode": 0,
[2026-03-14 12:05:46]     "pilotErrorDiag": "",
[2026-03-14 12:05:46]  *** Listing of results directory ***
[2026-03-14 12:05:46] total 405924
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc    585013 Mar 12 15:32 pilot3.tar.gz
[2026-03-14 12:05:46] -rwx------. 1 boinc boinc     36322 Mar 12 15:40 runpilot2-wrapper.sh
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc      5111 Mar 12 15:41 queuedata.json
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc       100 Mar 14 10:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 12:05:46] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 10:09 run_atlas
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc       105 Mar 14 10:09 job.xml
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc      6709 Mar 14 10:09 init_data.xml
[2026-03-14 12:05:46] -rw-r--r--. 2 boinc boinc 212561395 Mar 14 10:09 EVNT.48967027._000193.pool.root.1
[2026-03-14 12:05:46] -rw-r--r--. 2 boinc boinc     15845 Mar 14 10:09 start_atlas.sh
[2026-03-14 12:05:46] drwxrwx--x. 2 boinc boinc      4096 Mar 14 10:09 shared
[2026-03-14 12:05:46] -rw-r--r--. 2 boinc boinc    597522 Mar 14 10:09 input.tar.gz
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc         0 Mar 14 10:09 boinc_lockfile
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc      2565 Mar 14 10:09 pandaJob.out
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc   1004579 Mar 14 10:09 agis_schedconf.cvmfs.json
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc   1511579 Mar 14 10:09 agis_ddmendpoints.agis.ALL.json
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc       445 Mar 14 10:10 workernode_map.json
[2026-03-14 12:05:46] drwx------. 5 boinc boinc      4096 Mar 14 10:10 pilot3
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc 196925499 Mar 14 11:47 HITS.48967030._004864.pool.root.1
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc       529 Mar 14 11:47 boinc_task_state.xml
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc      1031 Mar 14 11:48 memory_monitor_summary.json
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc    272814 Mar 14 11:48 log.48967030._004864.job.log.tgz.1
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc      6350 Mar 14 11:48 heartbeat.json
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc        95 Mar 14 11:48 pilot_heartbeat.json
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc      4901 Mar 14 11:49 pilotlog.txt
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc    849372 Mar 14 11:49 log.48967030._004864.job.log.1
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc       357 Mar 14 11:49 output.list
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc       620 Mar 14 11:49 runtime_log
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc   1136640 Mar 14 11:49 result.tar.gz
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc      9221 Mar 14 11:49 runtime_log.err
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc       663 Mar 14 11:49 D2kMDmYOwK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDml4mLDmx6DDin.diag
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc        27 Mar 14 12:05 wrapper_checkpoint.txt
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc      8192 Mar 14 12:05 boinc_mmap_file
[2026-03-14 12:05:46] -rw-r--r--. 1 boinc boinc     22259 Mar 14 12:05 stderr.txt
[2026-03-14 12:05:46] HITS file was successfully produced:
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc 196925499 Mar 14 11:47 shared/HITS.pool.root.1
[2026-03-14 12:05:46]  *** Contents of shared directory: ***
[2026-03-14 12:05:46] total 401612
[2026-03-14 12:05:46] -rw-r--r--. 2 boinc boinc 212561395 Mar 14 10:09 ATLAS.root_0
[2026-03-14 12:05:46] -rw-r--r--. 2 boinc boinc     15845 Mar 14 10:09 start_atlas.sh
[2026-03-14 12:05:46] -rw-r--r--. 2 boinc boinc    597522 Mar 14 10:09 input.tar.gz
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc 196925499 Mar 14 11:47 HITS.pool.root.1
[2026-03-14 12:05:46] -rw-------. 1 boinc boinc   1136640 Mar 14 11:49 result.tar.gz
12:05:47 (540292): run_atlas exited; CPU time 22828.990937
12:05:47 (540292): called boinc_finish(0)

</stderr_txt>
]]>

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