Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
20:45:25 (637637): wrapper (7.7.26015): starting
20:45:25 (637637): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 20:45:25] Arguments: --nthreads 8
[2026-03-12 20:45:25] Threads: 8
[2026-03-12 20:45:25] Checking for CVMFS
[2026-03-12 20:45:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 20:45:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 20:45:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 20:45:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 20:45:26] 2.13.3.0 1630 1671 49924 157213 3 50 2103820 4096001 0 130560 0 1243183 99.988 72429 926 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-12 20:45:26] CVMFS is ok
[2026-03-12 20:45:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 20:45:26] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-12 20:45:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-12 20:45:26] Further information can be found at the LHC@home message board.
[2026-03-12 20:45:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 20:45:26] Checking for apptainer binary...
[2026-03-12 20:45:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 20:45:26] Running /usr/bin/apptainer --version
[2026-03-12 20:45:26] apptainer version 1.4.5
[2026-03-12 20:45:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 20:45:26] Ryzen-9-7950X3D-Zen4-Ubu24
[2026-03-12 20:45:26] apptainer works
[2026-03-12 20:45:26] Set ATHENA_PROC_NUMBER=8
[2026-03-12 20:45:26] Set ATHENA_CORE_NUMBER=8
[2026-03-12 20:45:26] Starting ATLAS job with PandaID=7043269897
[2026-03-12 20:45:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 21:22:50]  *** The last 200 lines of the pilot log: ***
[2026-03-12 21:22:50]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-12 21:22:50]  is_altstaged=None
[2026-03-12 21:22:50]  is_tar=False
[2026-03-12 21:22:50]  lfn=log.48955006._045703.job.log.tgz.1
[2026-03-12 21:22:50]  mtime=0
[2026-03-12 21:22:50]  protocol_id=None
[2026-03-12 21:22:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 21:22:50]  replicas=None
[2026-03-12 21:22:50]  scope=mc23_13p6TeV
[2026-03-12 21:22:50]  status=None
[2026-03-12 21:22:50]  status_code=0
[2026-03-12 21:22:50]  storage_token=
[2026-03-12 21:22:50]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7043269897/log.48955006._045703.job.log.tgz.1
[2026-03-12 21:22:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/38/log.48955006._045703.job.log.tgz.1
[2026-03-12 21:22:50]  workdir=None
[2026-03-12 21:22:50] ]
[2026-03-12 21:22:50] 2026-03-12 20:22:13,959 | INFO     | transferring file log.48955006._045703.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7043269897/log.48955006._045703.job.log.tgz.1 to /var/lib/boinc
[2026-03-12 21:22:50] 2026-03-12 20:22:13,959 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7043269897/log.48955006._045703.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.489550
[2026-03-12 21:22:50] 2026-03-12 20:22:13,974 | INFO     | adding to output.list: log.48955006._045703.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/38/log.48955006._045703.job.log.tg
[2026-03-12 21:22:50] 2026-03-12 20:22:13,974 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 21:22:50] 2026-03-12 20:22:13,974 | INFO     | summary of transferred files:
[2026-03-12 21:22:50] 2026-03-12 20:22:13,974 | INFO     |  -- lfn=log.48955006._045703.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 21:22:50] 2026-03-12 20:22:13,974 | INFO     | stage-out finished correctly
[2026-03-12 21:22:50] 2026-03-12 20:22:15,235 | INFO     | time since job start (2195s) is within the limit (345600.0s)
[2026-03-12 21:22:50] 2026-03-12 20:22:15,293 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 21:22:50] 2026-03-12 20:22:16,399 | WARNING  | process 646452 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 21:22:50] 2026-03-12 20:22:16,400 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7043269897/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 21:22:50] 2026-03-12 20:22:16,443 | INFO     | number of running child processes to parent process 646452: 1
[2026-03-12 21:22:50] 2026-03-12 20:22:16,443 | INFO     | maximum number of monitored processes: 6
[2026-03-12 21:22:50] 2026-03-12 20:22:17,240 | INFO     | time since job start (2197s) is within the limit (345600.0s)
[2026-03-12 21:22:50] 2026-03-12 20:22:17,617 | INFO     | job 7043269897 has state=finished
[2026-03-12 21:22:50] 2026-03-12 20:22:17,617 | INFO     | preparing for final server update for job 7043269897 in state='finished'
[2026-03-12 21:22:50] 2026-03-12 20:22:17,617 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7043269897/jobReport.json
[2026-03-12 21:22:50] 2026-03-12 20:22:17,618 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-03-12 21:22:50] 2026-03-12 20:22:17,618 | INFO     | this job has now completed (state=finished)
[2026-03-12 21:22:50] 2026-03-12 20:22:17,618 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 21:22:50] 2026-03-12 20:22:17,618 | INFO     | log transfer has been attempted: DONE
[2026-03-12 21:22:50] 2026-03-12 20:22:17,618 | INFO     | job 7043269897 has finished - writing final server update
[2026-03-12 21:22:50] 2026-03-12 20:22:17,619 | INFO     | total number of processed events: 400 (read)
[2026-03-12 21:22:50] 2026-03-12 20:22:17,622 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7043269897/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 21:22:50] 2026-03-12 20:22:17,622 | INFO     | extracted standard info from prmon json
[2026-03-12 21:22:50] 2026-03-12 20:22:17,622 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 21:22:50] 2026-03-12 20:22:17,622 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 21:22:50] 2026-03-12 20:22:17,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 21:22:50] 2026-03-12 20:22:17,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | fitting pss+swap vs Time
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | sum of square deviations: 7553630.0
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | sum of deviations: -909870388.0
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | mean x: 1773345917.0
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | mean y: 2911439.9655172415
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | intersect: 213610797656.1299
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | chi2: 0.04513169760468637
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | current memory leak: -120.45 B/s (using 29 data points, chi2=0.05)
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | could have reported an average CPU frequency of 4304 MHz (5 samples)
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | ..............................
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | . Timing measurements:
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | . get job = 0 s
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | . initial setup = 4 s
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | . payload setup = 4 s
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | . stage-in = 0 s
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | . payload execution = 2174 s
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | . stage-out = 0 s
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | . log creation = 0 s
[2026-03-12 21:22:50] 2026-03-12 20:22:17,623 | INFO     | ..............................
[2026-03-12 21:22:50] 2026-03-12 20:22:17,651 | INFO     | 
[2026-03-12 21:22:50] 2026-03-12 20:22:17,651 | INFO     | job summary report
[2026-03-12 21:22:50] 2026-03-12 20:22:17,651 | INFO     | --------------------------------------------------
[2026-03-12 21:22:50] 2026-03-12 20:22:17,651 | INFO     | PanDA job id: 7043269897
[2026-03-12 21:22:50] 2026-03-12 20:22:17,651 | INFO     | task id: 48955006
[2026-03-12 21:22:50] 2026-03-12 20:22:17,651 | INFO     | errors: (none)
[2026-03-12 21:22:50] 2026-03-12 20:22:17,651 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 21:22:50] 2026-03-12 20:22:17,651 | INFO     | pilot state: finished 
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | transexitcode: 0
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | exeerrorcode: 0
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | exeerrordiag: 
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | exitcode: 0
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | exitmsg: OK
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | cpuconsumptiontime: 16060 s
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | nevents: 400
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | neventsw: 0
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | pid: 646452
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | pgrp: 646452
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | corecount: 8
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | event service: False
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | sizes: {0: 2280031, 1: 2280237, 11: 2280265, 2182: 2305412, 2183: 2314424, 2184: 2314480, 2187: 2314834}
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | --------------------------------------------------
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | 
[2026-03-12 21:22:50] 2026-03-12 20:22:17,652 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | job 7043269897 has completed (purged errors)
[2026-03-12 21:22:50] 2026-03-12 20:22:17,671 | INFO     | overall cleanup function is called
[2026-03-12 21:22:50] 2026-03-12 20:22:18,679 | INFO     | --- collectZombieJob: --- 10, [646452]
[2026-03-12 21:22:50] 2026-03-12 20:22:18,679 | INFO     | zombie collector waiting for pid 646452
[2026-03-12 21:22:50] 2026-03-12 20:22:18,679 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 21:22:50] 2026-03-12 20:22:18,679 | INFO     | collected zombie processes
[2026-03-12 21:22:50] 2026-03-12 20:22:18,679 | INFO     | will attempt to kill all subprocesses of pid=646452
[2026-03-12 21:22:50] 2026-03-12 20:22:18,726 | INFO     | process IDs to be killed: [646452] (in reverse order)
[2026-03-12 21:22:50] 2026-03-12 20:22:18,770 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 21:22:50] 2026-03-12 20:22:18,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 21:22:50] 2026-03-12 20:22:18,771 | INFO     | did not find any defunct processes belonging to 646452
[2026-03-12 21:22:50] 2026-03-12 20:22:18,773 | INFO     | did not find any defunct processes belonging to 646452
[2026-03-12 21:22:50] 2026-03-12 20:22:18,773 | INFO     | ready for new job
[2026-03-12 21:22:50] 2026-03-12 20:22:18,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 21:22:50] 2026-03-12 20:22:18,774 | INFO     | **************************************
[2026-03-12 21:22:50] 2026-03-12 20:22:18,774 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 21:22:50] 2026-03-12 20:22:18,774 | INFO     | **************************************
[2026-03-12 21:22:50] 2026-03-12 20:22:18,774 | INFO     | 
[2026-03-12 21:22:50] 2026-03-12 20:22:18,775 | INFO     | architecture information:
[2026-03-12 21:22:50] 2026-03-12 20:22:18,775 | INFO     | executing command: cat /etc/os-release
[2026-03-12 21:22:50] 2026-03-12 20:22:18,792 | INFO     | cat /etc/os-release:
[2026-03-12 21:22:50] NAME="CentOS Linux"
[2026-03-12 21:22:50] VERSION="7 (Core)"
[2026-03-12 21:22:50] ID="centos"
[2026-03-12 21:22:50] ID_LIKE="rhel fedora"
[2026-03-12 21:22:50] VERSION_ID="7"
[2026-03-12 21:22:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 21:22:50] ANSI_COLOR="0;31"
[2026-03-12 21:22:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 21:22:50] HOME_URL="https://www.centos.org/"
[2026-03-12 21:22:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 21:22:50] 
[2026-03-12 21:22:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 21:22:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 21:22:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 21:22:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 21:22:50] 
[2026-03-12 21:22:50] 2026-03-12 20:22:18,793 | INFO     | **************************************
[2026-03-12 21:22:50] 2026-03-12 20:22:19,295 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-12 21:22:50] 2026-03-12 20:22:19,309 | INFO     | sufficient remaining disk space (1768210563072 B)
[2026-03-12 21:22:50] 2026-03-12 20:22:19,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 21:22:50] 2026-03-12 20:22:19,309 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 21:22:50] 2026-03-12 20:22:19,309 | INFO     | update_server=False
[2026-03-12 21:22:50] 2026-03-12 20:22:19,309 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 21:22:50] 2026-03-12 20:22:19,310 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 21:22:50] 2026-03-12 20:22:19,416 | INFO     | all payload control threads have been joined
[2026-03-12 21:22:50] 2026-03-12 20:22:19,518 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 21:22:50] 2026-03-12 20:22:19,552 | INFO     | all data control threads have been joined
[2026-03-12 21:22:50] 2026-03-12 20:22:19,781 | INFO     | all job control threads have been joined
[2026-03-12 21:22:50] 2026-03-12 20:22:19,950 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 21:22:50] 2026-03-12 20:22:19,950 | INFO     | aborting loop
[2026-03-12 21:22:50] 2026-03-12 20:22:20,314 | INFO     | [job] retrieve thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:20,316 | INFO     | [job] queue monitor thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:20,415 | INFO     | [payload] failed_post thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:20,421 | INFO     | [payload] control thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:20,557 | INFO     | [data] control thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:20,787 | INFO     | [job] control thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:20,944 | INFO     | [payload] validate_post thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:20,955 | INFO     | [job] job monitor thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:20,966 | INFO     | [job] validate thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:21,112 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:21,178 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:21,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 21:22:50] 2026-03-12 20:22:21,343 | INFO     | [data] copytool_in thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:21,523 | INFO     | [data] copytool_out thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:21,619 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:25,346 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:30,250 | INFO     | job.realtimelogging is not enabled
[2026-03-12 21:22:50] 2026-03-12 20:22:31,255 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 21:22:50] 2026-03-12 20:22:43,289 | INFO     | [monitor] cgroup control has ended
[2026-03-12 21:22:50] 2026-03-12 20:22:44,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137039195141952)>', '<ExcThread(monitor, started 137038531630848)>']
[2026-03-12 21:22:50] 2026-03-12 20:22:49,774 | INFO     | all workflow threads have been joined
[2026-03-12 21:22:50] 2026-03-12 20:22:49,774 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 21:22:50] 2026-03-12 20:22:49,774 | INFO     | traces error code: 0
[2026-03-12 21:22:50] 2026-03-12 20:22:49,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 21:22:50] 2026-03-12 20:22:50,357 | INFO     | PID=641843 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 21:22:50] 2026-03-12 20:22:50,358 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 21:22:50] 2026-03-12 20:22:50,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 21:22:50] 2026-03-12 20:22:50,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 21:22:50] 2026-03-12 20:22:50,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 21:22:50] 2026-03-12 20:22:50,358 | CRITICAL | thread 'MainThread' is not alive
[2026-03-12 21:22:50] 2026-03-12 20:22:50,358 | INFO     | [monitor] control thread has ended
[2026-03-12 21:22:50] 2026-03-12 20:22:50,464 [wrapper] ==== pilot stdout END ====
[2026-03-12 21:22:50] 2026-03-12 20:22:50,465 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 21:22:50] 2026-03-12 20:22:50,470 [wrapper] pilotpid: 641843
[2026-03-12 21:22:50] 2026-03-12 20:22:50,472 [wrapper] Pilot exit status: 0
[2026-03-12 21:22:50] 2026-03-12 20:22:50,478 [wrapper] pandaids: 7043269897
[2026-03-12 21:22:50] 2026-03-12 20:22:50,496 [wrapper] cleanup supervisor_pilot  654968 641844
[2026-03-12 21:22:50] 2026-03-12 20:22:50,499 [wrapper] Test setup, not cleaning
[2026-03-12 21:22:50] 2026-03-12 20:22:50,501 [wrapper] apfmon messages muted
[2026-03-12 21:22:50] 2026-03-12 20:22:50,504 [wrapper] ==== wrapper stdout END ====
[2026-03-12 21:22:50] 2026-03-12 20:22:50,508 [wrapper] ==== wrapper stderr END ====
[2026-03-12 21:22:50]  *** Error codes and diagnostics ***
[2026-03-12 21:22:50]     "exeErrorCode": 0,
[2026-03-12 21:22:50]     "exeErrorDiag": "",
[2026-03-12 21:22:50]     "pilotErrorCode": 0,
[2026-03-12 21:22:50]     "pilotErrorDiag": "",
[2026-03-12 21:22:50]  *** Listing of results directory ***
[2026-03-12 21:22:50] total 611492
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc      5111 Mar 12 13:54 queuedata.json
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc    585013 Mar 12 13:54 pilot3.tar.gz
[2026-03-12 21:22:50] -rwx------ 1 boinc boinc     36322 Mar 12 13:54 runpilot2-wrapper.sh
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc       100 Mar 12 20:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 21:22:50] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 20:45 run_atlas
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc       105 Mar 12 20:45 job.xml
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc      9550 Mar 12 20:45 init_data.xml
[2026-03-12 21:22:50] -rw-r--r-- 2 boinc boinc 436129274 Mar 12 20:45 EVNT.46701403._000905.pool.root.1
[2026-03-12 21:22:50] -rw-r--r-- 2 boinc boinc     15845 Mar 12 20:45 start_atlas.sh
[2026-03-12 21:22:50] drwxrwx--x 2 boinc boinc      4096 Mar 12 20:45 shared
[2026-03-12 21:22:50] -rw-r--r-- 2 boinc boinc    597531 Mar 12 20:45 input.tar.gz
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc         0 Mar 12 20:45 boinc_lockfile
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc      2564 Mar 12 20:45 pandaJob.out
[2026-03-12 21:22:50] -rw------- 1 boinc boinc   1006522 Mar 12 20:45 agis_schedconf.cvmfs.json
[2026-03-12 21:22:50] -rw------- 1 boinc boinc   1511578 Mar 12 20:45 agis_ddmendpoints.agis.ALL.json
[2026-03-12 21:22:50] -rw------- 1 boinc boinc       438 Mar 12 20:45 workernode_map.json
[2026-03-12 21:22:50] drwx------ 5 boinc boinc      4096 Mar 12 20:45 pilot3
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc       530 Mar 12 21:21 boinc_task_state.xml
[2026-03-12 21:22:50] -rw------- 1 boinc boinc 184783077 Mar 12 21:21 HITS.48955006._045703.pool.root.1
[2026-03-12 21:22:50] -rw------- 1 boinc boinc      1017 Mar 12 21:22 memory_monitor_summary.json
[2026-03-12 21:22:50] -rw------- 1 boinc boinc    304543 Mar 12 21:22 log.48955006._045703.job.log.tgz.1
[2026-03-12 21:22:50] -rw------- 1 boinc boinc      6337 Mar 12 21:22 heartbeat.json
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc      8192 Mar 12 21:22 boinc_mmap_file
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc        27 Mar 12 21:22 wrapper_checkpoint.txt
[2026-03-12 21:22:50] -rw------- 1 boinc boinc        95 Mar 12 21:22 pilot_heartbeat.json
[2026-03-12 21:22:50] -rw------- 1 boinc boinc       816 Mar 12 21:22 pilotlog.txt
[2026-03-12 21:22:50] -rw------- 1 boinc boinc    352844 Mar 12 21:22 log.48955006._045703.job.log.1
[2026-03-12 21:22:50] -rw------- 1 boinc boinc       357 Mar 12 21:22 output.list
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc       620 Mar 12 21:22 runtime_log
[2026-03-12 21:22:50] -rw------- 1 boinc boinc    675840 Mar 12 21:22 result.tar.gz
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc      8968 Mar 12 21:22 runtime_log.err
[2026-03-12 21:22:50] -rw------- 1 boinc boinc       656 Mar 12 21:22 OUKMDmZjuK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmdAkLDmR64LTo.diag
[2026-03-12 21:22:50] -rw-r--r-- 1 boinc boinc     21530 Mar 12 21:22 stderr.txt
[2026-03-12 21:22:50] HITS file was successfully produced:
[2026-03-12 21:22:50] -rw------- 1 boinc boinc 184783077 Mar 12 21:21 shared/HITS.pool.root.1
[2026-03-12 21:22:50]  *** Contents of shared directory: ***
[2026-03-12 21:22:50] total 607632
[2026-03-12 21:22:50] -rw-r--r-- 2 boinc boinc 436129274 Mar 12 20:45 ATLAS.root_0
[2026-03-12 21:22:50] -rw-r--r-- 2 boinc boinc     15845 Mar 12 20:45 start_atlas.sh
[2026-03-12 21:22:50] -rw-r--r-- 2 boinc boinc    597531 Mar 12 20:45 input.tar.gz
[2026-03-12 21:22:50] -rw------- 1 boinc boinc 184783077 Mar 12 21:21 HITS.pool.root.1
[2026-03-12 21:22:50] -rw------- 1 boinc boinc    675840 Mar 12 21:22 result.tar.gz
21:22:52 (637637): run_atlas exited; CPU time 16060.131964
21:22:52 (637637): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN