Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:56:30 (2887334): wrapper (7.7.26015): starting
16:56:30 (2887334): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 16:56:30] Arguments: --nthreads 4
[2026-03-14 16:56:30] Threads: 4
[2026-03-14 16:56:30] Checking for CVMFS
[2026-03-14 16:56:30] No cvmfs_config command found, will try listing directly
[2026-03-14 16:56:30] CVMFS is ok
[2026-03-14 16:56:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 16:56:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 16:56:30] Further information can be found at the LHC@home message board.
[2026-03-14 16:56:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 16:56:30] Checking for apptainer binary...
[2026-03-14 16:56:30] which: no apptainer in ((null))
[2026-03-14 16:56:30] apptainer is not installed, using version from CVMFS
[2026-03-14 16:56:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 16:56:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot164/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-14 16:56:31] apptainer works
[2026-03-14 16:56:31] Set ATHENA_PROC_NUMBER=4
[2026-03-14 16:56:31] Set ATHENA_CORE_NUMBER=4
[2026-03-14 16:56:31] Starting ATLAS job with PandaID=7043515097
[2026-03-14 16:56:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot164/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 18:15:19]  *** The last 200 lines of the pilot log: ***
[2026-03-14 18:15:19]  guid=01306de8-3f4f-428d-9069-eb61af16e574
[2026-03-14 18:15:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 18:15:19]  is_altstaged=None
[2026-03-14 18:15:19]  is_tar=False
[2026-03-14 18:15:19]  lfn=log.48955006._047291.job.log.tgz.1
[2026-03-14 18:15:19]  mtime=0
[2026-03-14 18:15:19]  protocol_id=None
[2026-03-14 18:15:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 18:15:19]  replicas=None
[2026-03-14 18:15:19]  scope=mc23_13p6TeV
[2026-03-14 18:15:19]  status=None
[2026-03-14 18:15:19]  status_code=0
[2026-03-14 18:15:19]  storage_token=
[2026-03-14 18:15:19]  surl=/var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7043515097/log.48955006._047291.job.log.tgz.1
[2026-03-14 18:15:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/46/log.48955006._047291.job.log.tgz.1
[2026-03-14 18:15:19]  workdir=None
[2026-03-14 18:15:19] ]
[2026-03-14 18:15:19] 2026-03-14 17:14:43,486 | INFO     | transferring file log.48955006._047291.job.log.tgz.1 from /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7043515097/log.48955006._047291.job.log.tgz.1 to /var/lib/
[2026-03-14 18:15:19] 2026-03-14 17:14:43,486 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7043515097/log.48955006._047291.job.log.tgz.1 /var/lib/boinc/var/slot164/slots/0/
[2026-03-14 18:15:19] 2026-03-14 17:14:43,522 | INFO     | adding to output.list: log.48955006._047291.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/46/log.48955006._047291.job.log.tg
[2026-03-14 18:15:19] 2026-03-14 17:14:43,523 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 18:15:19] 2026-03-14 17:14:43,523 | INFO     | summary of transferred files:
[2026-03-14 18:15:19] 2026-03-14 17:14:43,523 | INFO     |  -- lfn=log.48955006._047291.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 18:15:19] 2026-03-14 17:14:43,523 | INFO     | stage-out finished correctly
[2026-03-14 18:15:19] 2026-03-14 17:14:44,452 | INFO     | PID=2891995 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-14 18:15:19] 2026-03-14 17:14:44,452 | INFO     | .. there are 51 such processes running
[2026-03-14 18:15:19] 2026-03-14 17:14:44,513 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 18:15:19] 2026-03-14 17:14:45,268 | INFO     | monitor loop #333: job 0:7043515097 is in state 'finished'
[2026-03-14 18:15:19] 2026-03-14 17:14:45,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 18:15:19] 2026-03-14 17:14:45,452 | INFO     | time since job start (4670s) is within the limit (345600.0s)
[2026-03-14 18:15:19] 2026-03-14 17:14:46,056 | INFO     | job 7043515097 has state=finished
[2026-03-14 18:15:19] 2026-03-14 17:14:46,056 | INFO     | preparing for final server update for job 7043515097 in state='finished'
[2026-03-14 18:15:19] 2026-03-14 17:14:46,057 | INFO     | reading metadata from: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7043515097/jobReport.json
[2026-03-14 18:15:19] 2026-03-14 17:14:46,059 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot164/slots/0/workernode_map.json
[2026-03-14 18:15:19] 2026-03-14 17:14:46,059 | INFO     | this job has now completed (state=finished)
[2026-03-14 18:15:19] 2026-03-14 17:14:46,059 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 18:15:19] 2026-03-14 17:14:46,059 | INFO     | log transfer has been attempted: DONE
[2026-03-14 18:15:19] 2026-03-14 17:14:46,059 | INFO     | job 7043515097 has finished - writing final server update
[2026-03-14 18:15:19] 2026-03-14 17:14:46,059 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_978328/.job.ad'
[2026-03-14 18:15:19] 2026-03-14 17:14:46,059 | INFO     | total number of processed events: 400 (read)
[2026-03-14 18:15:19] 2026-03-14 17:14:46,077 | INFO     | using path: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7043515097/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 18:15:19] 2026-03-14 17:14:46,077 | INFO     | extracted standard info from prmon json
[2026-03-14 18:15:19] 2026-03-14 17:14:46,077 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 18:15:19] 2026-03-14 17:14:46,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 18:15:19] 2026-03-14 17:14:46,078 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 18:15:19] 2026-03-14 17:14:46,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 18:15:19] 2026-03-14 17:14:46,079 | INFO     | fitting pss+swap vs Time
[2026-03-14 18:15:19] 2026-03-14 17:14:46,079 | INFO     | sum of square deviations: 106336877.5
[2026-03-14 18:15:19] 2026-03-14 17:14:46,079 | INFO     | sum of deviations: 528728510.5
[2026-03-14 18:15:19] 2026-03-14 17:14:46,079 | INFO     | mean x: 1773506251.5
[2026-03-14 18:15:19] 2026-03-14 17:14:46,079 | INFO     | mean y: 2321895.9857142856
[2026-03-14 18:15:19] 2026-03-14 17:14:46,079 | INFO     | intersect: -8815910694.284143
[2026-03-14 18:15:19] 2026-03-14 17:14:46,079 | INFO     | chi2: 0.00045756174513972536
[2026-03-14 18:15:19] 2026-03-14 17:14:46,079 | INFO     | current memory leak: 4.97 B/s (using 70 data points, chi2=0.00)
[2026-03-14 18:15:19] 2026-03-14 17:14:46,079 | INFO     | could have reported an average CPU frequency of 3562 MHz (6 samples)
[2026-03-14 18:15:19] 2026-03-14 17:14:46,080 | INFO     | ..............................
[2026-03-14 18:15:19] 2026-03-14 17:14:46,080 | INFO     | . Timing measurements:
[2026-03-14 18:15:19] 2026-03-14 17:14:46,080 | INFO     | . get job = 0 s
[2026-03-14 18:15:19] 2026-03-14 17:14:46,080 | INFO     | . initial setup = 9 s
[2026-03-14 18:15:19] 2026-03-14 17:14:46,080 | INFO     | . payload setup = 8 s
[2026-03-14 18:15:19] 2026-03-14 17:14:46,080 | INFO     | . stage-in = 0 s
[2026-03-14 18:15:19] 2026-03-14 17:14:46,080 | INFO     | . payload execution = 4643 s
[2026-03-14 18:15:19] 2026-03-14 17:14:46,080 | INFO     | . stage-out = 0 s
[2026-03-14 18:15:19] 2026-03-14 17:14:46,080 | INFO     | . log creation = 0 s
[2026-03-14 18:15:19] 2026-03-14 17:14:46,080 | INFO     | ..............................
[2026-03-14 18:15:19] 2026-03-14 17:14:46,270 | INFO     | 
[2026-03-14 18:15:19] 2026-03-14 17:14:46,270 | INFO     | job summary report
[2026-03-14 18:15:19] 2026-03-14 17:14:46,270 | INFO     | --------------------------------------------------
[2026-03-14 18:15:19] 2026-03-14 17:14:46,270 | INFO     | PanDA job id: 7043515097
[2026-03-14 18:15:19] 2026-03-14 17:14:46,270 | INFO     | task id: 48955006
[2026-03-14 18:15:19] 2026-03-14 17:14:46,270 | INFO     | errors: (none)
[2026-03-14 18:15:19] 2026-03-14 17:14:46,270 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | pilot state: finished 
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | transexitcode: 0
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | exeerrorcode: 0
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | exeerrordiag: 
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | exitcode: 0
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | exitmsg: OK
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | cpuconsumptiontime: 17508 s
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | nevents: 400
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | neventsw: 0
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | pid: 2897936
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | pgrp: 2897936
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | corecount: 4
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | event service: False
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | sizes: {0: 2280244, 11: 2280244, 4655: 2306443, 4657: 2315465, 4658: 2315521, 4660: 2315715}
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | --------------------------------------------------
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | 
[2026-03-14 18:15:19] 2026-03-14 17:14:46,271 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot164/slots/0
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,290 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 18:15:19] 2026-03-14 17:14:46,291 | INFO     | job 7043515097 has completed (purged errors)
[2026-03-14 18:15:19] 2026-03-14 17:14:46,291 | INFO     | overall cleanup function is called
[2026-03-14 18:15:19] 2026-03-14 17:14:47,297 | INFO     | --- collectZombieJob: --- 10, [2897936]
[2026-03-14 18:15:19] 2026-03-14 17:14:47,297 | INFO     | zombie collector waiting for pid 2897936
[2026-03-14 18:15:19] 2026-03-14 17:14:47,297 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 18:15:19] 2026-03-14 17:14:47,297 | INFO     | collected zombie processes
[2026-03-14 18:15:19] 2026-03-14 17:14:47,297 | INFO     | will attempt to kill all subprocesses of pid=2897936
[2026-03-14 18:15:19] 2026-03-14 17:14:47,906 | INFO     | process IDs to be killed: [2897936] (in reverse order)
[2026-03-14 18:15:19] 2026-03-14 17:14:48,171 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 18:15:19] 2026-03-14 17:14:48,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 18:15:19] 2026-03-14 17:14:48,201 | INFO     | did not find any defunct processes belonging to 2897936
[2026-03-14 18:15:19] 2026-03-14 17:14:48,230 | INFO     | did not find any defunct processes belonging to 2897936
[2026-03-14 18:15:19] 2026-03-14 17:14:48,230 | INFO     | ready for new job
[2026-03-14 18:15:19] 2026-03-14 17:14:48,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 18:15:19] 2026-03-14 17:14:48,232 | INFO     | **************************************
[2026-03-14 18:15:19] 2026-03-14 17:14:48,232 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 18:15:19] 2026-03-14 17:14:48,232 | INFO     | **************************************
[2026-03-14 18:15:19] 2026-03-14 17:14:48,232 | INFO     | 
[2026-03-14 18:15:19] 2026-03-14 17:14:48,238 | INFO     | architecture information:
[2026-03-14 18:15:19] 2026-03-14 17:14:48,239 | INFO     | executing command: cat /etc/os-release
[2026-03-14 18:15:19] 2026-03-14 17:14:48,260 | INFO     | cat /etc/os-release:
[2026-03-14 18:15:19] NAME="CentOS Linux"
[2026-03-14 18:15:19] VERSION="7 (Core)"
[2026-03-14 18:15:19] ID="centos"
[2026-03-14 18:15:19] ID_LIKE="rhel fedora"
[2026-03-14 18:15:19] VERSION_ID="7"
[2026-03-14 18:15:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 18:15:19] ANSI_COLOR="0;31"
[2026-03-14 18:15:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 18:15:19] HOME_URL="https://www.centos.org/"
[2026-03-14 18:15:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 18:15:19] 
[2026-03-14 18:15:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 18:15:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 18:15:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 18:15:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 18:15:19] 
[2026-03-14 18:15:19] 2026-03-14 17:14:48,260 | INFO     | **************************************
[2026-03-14 18:15:19] 2026-03-14 17:14:48,762 | INFO     | executing command: df -mP /var/lib/boinc/var/slot164/slots/0
[2026-03-14 18:15:19] 2026-03-14 17:14:48,777 | INFO     | sufficient remaining disk space (19846397952 B)
[2026-03-14 18:15:19] 2026-03-14 17:14:48,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 18:15:19] 2026-03-14 17:14:48,778 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 18:15:19] 2026-03-14 17:14:48,778 | INFO     | update_server=False
[2026-03-14 18:15:19] 2026-03-14 17:14:48,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 18:15:19] 2026-03-14 17:14:48,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:15:19] 2026-03-14 17:14:48,779 | INFO     | aborting loop
[2026-03-14 18:15:19] 2026-03-14 17:14:49,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 18:15:19] 2026-03-14 17:14:49,396 | INFO     | all data control threads have been joined
[2026-03-14 18:15:19] 2026-03-14 17:14:49,783 | INFO     | [job] retrieve thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:49,784 | INFO     | [job] job monitor thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:49,885 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:50,150 | INFO     | all payload control threads have been joined
[2026-03-14 18:15:19] 2026-03-14 17:14:50,212 | INFO     | all job control threads have been joined
[2026-03-14 18:15:19] 2026-03-14 17:14:50,401 | INFO     | [data] control thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:50,484 | INFO     | [data] copytool_in thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:50,486 | INFO     | [job] validate thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:50,505 | INFO     | [payload] failed_post thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:50,580 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 18:15:19] 2026-03-14 17:14:50,638 | INFO     | [payload] validate_post thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:50,779 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:50,932 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:51,057 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:51,086 | INFO     | [data] copytool_out thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:51,138 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:15:19] 2026-03-14 17:14:51,155 | INFO     | [payload] control thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:51,217 | INFO     | [job] control thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:52,143 | INFO     | [job] queue monitor thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:14:54,593 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 18:15:19] 2026-03-14 17:15:02,522 | INFO     | [monitor] cgroup control has ended
[2026-03-14 18:15:19] 2026-03-14 17:15:03,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22569344018240)>', '<ExcThread(monitor, started 22569038100224)>']
[2026-03-14 18:15:19] 2026-03-14 17:15:08,460 | INFO     | all workflow threads have been joined
[2026-03-14 18:15:19] 2026-03-14 17:15:08,460 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 18:15:19] 2026-03-14 17:15:08,460 | INFO     | traces error code: 0
[2026-03-14 18:15:19] 2026-03-14 17:15:08,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 18:15:19] 2026-03-14 17:15:19,139 | INFO     | PID=2891995 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 18:15:19] 2026-03-14 17:15:19,139 | INFO     | .. there are 51 such processes running
[2026-03-14 18:15:19] 2026-03-14 17:15:19,140 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 18:15:19] 2026-03-14 17:15:19,140 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 18:15:19] 2026-03-14 17:15:19,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 18:15:19] 2026-03-14 17:15:19,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 18:15:19] 2026-03-14 17:15:19,140 | INFO     | [monitor] control thread has ended
[2026-03-14 18:15:19] 2026-03-14 17:15:19,290 [wrapper] ==== pilot stdout END ====
[2026-03-14 18:15:19] 2026-03-14 17:15:19,292 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 18:15:19] 2026-03-14 17:15:19,293 [wrapper] pilotpid: 2891995
[2026-03-14 18:15:19] 2026-03-14 17:15:19,295 [wrapper] Pilot exit status: 0
[2026-03-14 18:15:19] 2026-03-14 17:15:19,304 [wrapper] pandaids: 7043515097
[2026-03-14 18:15:19] 2026-03-14 17:15:19,438 [wrapper] cleanup supervisor_pilot 3591935 2891996
[2026-03-14 18:15:19] 2026-03-14 17:15:19,443 [wrapper] Test setup, not cleaning
[2026-03-14 18:15:19] 2026-03-14 17:15:19,445 [wrapper] apfmon messages muted
[2026-03-14 18:15:19] 2026-03-14 17:15:19,447 [wrapper] ==== wrapper stdout END ====
[2026-03-14 18:15:19] 2026-03-14 17:15:19,449 [wrapper] ==== wrapper stderr END ====
[2026-03-14 18:15:19]  *** Error codes and diagnostics ***
[2026-03-14 18:15:19]     "exeErrorCode": 0,
[2026-03-14 18:15:19]     "exeErrorDiag": "",
[2026-03-14 18:15:19]     "pilotErrorCode": 0,
[2026-03-14 18:15:19]     "pilotErrorDiag": "",
[2026-03-14 18:15:19]  *** Listing of results directory ***
[2026-03-14 18:15:19] total 608824
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc      5111 Mar 12 20:23 queuedata.json
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc    585013 Mar 12 20:23 pilot3.tar.gz
[2026-03-14 18:15:19] -rwx------. 1 boinc boinc     36322 Mar 12 20:24 runpilot2-wrapper.sh
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc       100 Mar 14 16:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 18:15:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 16:56 run_atlas
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc       105 Mar 14 16:56 job.xml
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc      6708 Mar 14 16:56 init_data.xml
[2026-03-14 18:15:19] -rw-r--r--. 2 boinc boinc 438381102 Mar 14 16:56 EVNT.46701403._000936.pool.root.1
[2026-03-14 18:15:19] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:56 start_atlas.sh
[2026-03-14 18:15:19] drwxrwx--x. 2 boinc boinc      4096 Mar 14 16:56 shared
[2026-03-14 18:15:19] -rw-r--r--. 2 boinc boinc    597531 Mar 14 16:56 input.tar.gz
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc         0 Mar 14 16:56 boinc_lockfile
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc      2565 Mar 14 16:56 pandaJob.out
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc   1004579 Mar 14 16:56 agis_schedconf.cvmfs.json
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc   1511579 Mar 14 16:56 agis_ddmendpoints.agis.ALL.json
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc       444 Mar 14 16:56 workernode_map.json
[2026-03-14 18:15:19] drwx------. 5 boinc boinc      4096 Mar 14 16:56 pilot3
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc 179173760 Mar 14 18:14 HITS.48955006._047291.pool.root.1
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc       530 Mar 14 18:14 boinc_task_state.xml
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc      1031 Mar 14 18:14 memory_monitor_summary.json
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc    285242 Mar 14 18:14 log.48955006._047291.job.log.tgz.1
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc      6357 Mar 14 18:14 heartbeat.json
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc      8192 Mar 14 18:14 boinc_mmap_file
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc        27 Mar 14 18:14 wrapper_checkpoint.txt
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc        95 Mar 14 18:15 pilot_heartbeat.json
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc       823 Mar 14 18:15 pilotlog.txt
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc    685163 Mar 14 18:15 log.48955006._047291.job.log.1
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc       357 Mar 14 18:15 output.list
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc       620 Mar 14 18:15 runtime_log
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc    993280 Mar 14 18:15 result.tar.gz
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc      9221 Mar 14 18:15 runtime_log.err
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc       661 Mar 14 18:15 oS8MDm3o0K9n9Rq4apOajLDm4fhM0noT9bVooX4SDm11kLDmkdyLBo.diag
[2026-03-14 18:15:19] -rw-r--r--. 1 boinc boinc     21340 Mar 14 18:15 stderr.txt
[2026-03-14 18:15:19] HITS file was successfully produced:
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc 179173760 Mar 14 18:14 shared/HITS.pool.root.1
[2026-03-14 18:15:19]  *** Contents of shared directory: ***
[2026-03-14 18:15:19] total 604664
[2026-03-14 18:15:19] -rw-r--r--. 2 boinc boinc 438381102 Mar 14 16:56 ATLAS.root_0
[2026-03-14 18:15:19] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:56 start_atlas.sh
[2026-03-14 18:15:19] -rw-r--r--. 2 boinc boinc    597531 Mar 14 16:56 input.tar.gz
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc 179173760 Mar 14 18:14 HITS.pool.root.1
[2026-03-14 18:15:19] -rw-------. 1 boinc boinc    993280 Mar 14 18:15 result.tar.gz
18:15:21 (2887334): run_atlas exited; CPU time 17723.757118
18:15:21 (2887334): called boinc_finish(0)

</stderr_txt>
]]>

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