Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
01:30:27 (816756): wrapper (7.7.26015): starting
01:30:27 (816756): wrapper: running run_atlas (--nthreads 12)
[2026-03-13 01:30:27] Arguments: --nthreads 12
[2026-03-13 01:30:27] Threads: 12
[2026-03-13 01:30:27] Checking for CVMFS
[2026-03-13 01:30:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 01:30:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 01:30:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 01:30:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 01:30:28] 2.13.3.0 2263 998 50008 157222 2 50 3667625 4096001 922 130560 0 2426440 99.996 41559 712 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-13 01:30:28] CVMFS is ok
[2026-03-13 01:30:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 01:30:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 01:30:28] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-13 01:30:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-13 01:30:28] Further information can be found at the LHC@home message board.
[2026-03-13 01:30:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 01:30:28] Checking for apptainer binary...
[2026-03-13 01:30:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 01:30:28] Running /usr/bin/apptainer --version
[2026-03-13 01:30:28] apptainer version 1.4.5
[2026-03-13 01:30:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 01:30:28] test-run
[2026-03-13 01:30:28] apptainer works
[2026-03-13 01:30:28] Set ATHENA_PROC_NUMBER=12
[2026-03-13 01:30:28] Set ATHENA_CORE_NUMBER=12
[2026-03-13 01:30:28] Starting ATLAS job with PandaID=7043304149
[2026-03-13 01:30:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 01:55:46]  *** The last 200 lines of the pilot log: ***
[2026-03-13 01:55:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-13 01:55:46]  is_altstaged=None
[2026-03-13 01:55:46]  is_tar=False
[2026-03-13 01:55:46]  lfn=log.48955006._046009.job.log.tgz.1
[2026-03-13 01:55:46]  mtime=0
[2026-03-13 01:55:46]  protocol_id=None
[2026-03-13 01:55:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-13 01:55:46]  replicas=None
[2026-03-13 01:55:46]  scope=mc23_13p6TeV
[2026-03-13 01:55:46]  status=None
[2026-03-13 01:55:46]  status_code=0
[2026-03-13 01:55:46]  storage_token=
[2026-03-13 01:55:46]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7043304149/log.48955006._046009.job.log.tgz.1
[2026-03-13 01:55:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/ad/log.48955006._046009.job.log.tgz.1
[2026-03-13 01:55:46]  workdir=None
[2026-03-13 01:55:46] ]
[2026-03-13 01:55:46] 2026-03-13 01:54:48,767 | INFO     | transferring file log.48955006._046009.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7043304149/log.48955006._046009.job.log.tgz.1 to /var/lib/boinc
[2026-03-13 01:55:46] 2026-03-13 01:54:48,767 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7043304149/log.48955006._046009.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.489550
[2026-03-13 01:55:46] 2026-03-13 01:54:48,775 | INFO     | adding to output.list: log.48955006._046009.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/ad/log.48955006._046009.job.log.tg
[2026-03-13 01:55:46] 2026-03-13 01:54:48,775 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-13 01:55:46] 2026-03-13 01:54:48,775 | INFO     | summary of transferred files:
[2026-03-13 01:55:46] 2026-03-13 01:54:48,775 | INFO     |  -- lfn=log.48955006._046009.job.log.tgz.1, status_code=0, status=transferred
[2026-03-13 01:55:46] 2026-03-13 01:54:48,775 | INFO     | stage-out finished correctly
[2026-03-13 01:55:46] 2026-03-13 01:54:48,841 | INFO     | time since job start (1450s) is within the limit (345600.0s)
[2026-03-13 01:55:46] 2026-03-13 01:54:49,120 | WARNING  | process 825526 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 01:55:46] 2026-03-13 01:54:49,120 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7043304149/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 01:55:46] 2026-03-13 01:54:49,136 | INFO     | number of running child processes to parent process 825526: 1
[2026-03-13 01:55:46] 2026-03-13 01:54:49,136 | INFO     | maximum number of monitored processes: 6
[2026-03-13 01:55:46] 2026-03-13 01:54:50,515 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-13 01:55:46] 2026-03-13 01:54:50,550 | INFO     | job 7043304149 has state=finished
[2026-03-13 01:55:46] 2026-03-13 01:54:50,550 | INFO     | preparing for final server update for job 7043304149 in state='finished'
[2026-03-13 01:55:46] 2026-03-13 01:54:50,550 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7043304149/jobReport.json
[2026-03-13 01:55:46] 2026-03-13 01:54:50,551 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-03-13 01:55:46] 2026-03-13 01:54:50,551 | INFO     | this job has now completed (state=finished)
[2026-03-13 01:55:46] 2026-03-13 01:54:50,551 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 01:55:46] 2026-03-13 01:54:50,551 | INFO     | log transfer has been attempted: DONE
[2026-03-13 01:55:46] 2026-03-13 01:54:50,551 | INFO     | job 7043304149 has finished - writing final server update
[2026-03-13 01:55:46] 2026-03-13 01:54:50,551 | INFO     | total number of processed events: 400 (read)
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7043304149/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | extracted standard info from prmon json
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | fitting pss+swap vs Time
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | sum of square deviations: 1518168.0
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | sum of deviations: 1065323398.0
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | mean x: 1773366245.0
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | mean y: 2762357.529411765
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | intersect: -1244397431838.3044
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | chi2: 0.3293716612712158
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | current memory leak: 701.72 B/s (using 17 data points, chi2=0.33)
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | could have reported an average CPU frequency of 4291 MHz (4 samples)
[2026-03-13 01:55:46] 2026-03-13 01:54:50,553 | INFO     | ..............................
[2026-03-13 01:55:46] 2026-03-13 01:54:50,554 | INFO     | . Timing measurements:
[2026-03-13 01:55:46] 2026-03-13 01:54:50,554 | INFO     | . get job = 0 s
[2026-03-13 01:55:46] 2026-03-13 01:54:50,554 | INFO     | . initial setup = 3 s
[2026-03-13 01:55:46] 2026-03-13 01:54:50,554 | INFO     | . payload setup = 1 s
[2026-03-13 01:55:46] 2026-03-13 01:54:50,554 | INFO     | . stage-in = 0 s
[2026-03-13 01:55:46] 2026-03-13 01:54:50,554 | INFO     | . payload execution = 1434 s
[2026-03-13 01:55:46] 2026-03-13 01:54:50,554 | INFO     | . stage-out = 0 s
[2026-03-13 01:55:46] 2026-03-13 01:54:50,554 | INFO     | . log creation = 0 s
[2026-03-13 01:55:46] 2026-03-13 01:54:50,554 | INFO     | ..............................
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | 
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | job summary report
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | --------------------------------------------------
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | PanDA job id: 7043304149
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | task id: 48955006
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | errors: (none)
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | pilot state: finished 
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | transexitcode: 0
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | exeerrorcode: 0
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | exeerrordiag: 
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | exitcode: 0
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | exitmsg: OK
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | cpuconsumptiontime: 12386 s
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | nevents: 400
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | neventsw: 0
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | pid: 825526
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | pgrp: 825526
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | corecount: 12
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | event service: False
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | sizes: {0: 2280239, 10: 2280239, 1440: 2314043, 1442: 2314237}
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | --------------------------------------------------
[2026-03-13 01:55:46] 2026-03-13 01:54:50,573 | INFO     | 
[2026-03-13 01:55:46] 2026-03-13 01:54:50,574 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-13 01:55:46] 2026-03-13 01:54:50,584 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,584 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,584 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,584 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,585 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 01:55:46] 2026-03-13 01:54:50,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,585 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 01:55:46] 2026-03-13 01:54:50,585 | INFO     | job 7043304149 has completed (purged errors)
[2026-03-13 01:55:46] 2026-03-13 01:54:50,585 | INFO     | overall cleanup function is called
[2026-03-13 01:55:46] 2026-03-13 01:54:51,591 | INFO     | --- collectZombieJob: --- 10, [825526]
[2026-03-13 01:55:46] 2026-03-13 01:54:51,591 | INFO     | zombie collector waiting for pid 825526
[2026-03-13 01:55:46] 2026-03-13 01:54:51,591 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 01:55:46] 2026-03-13 01:54:51,591 | INFO     | collected zombie processes
[2026-03-13 01:55:46] 2026-03-13 01:54:51,591 | INFO     | will attempt to kill all subprocesses of pid=825526
[2026-03-13 01:55:46] 2026-03-13 01:54:51,619 | INFO     | process IDs to be killed: [825526] (in reverse order)
[2026-03-13 01:55:46] 2026-03-13 01:54:51,639 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 01:55:46] 2026-03-13 01:54:51,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 01:55:46] 2026-03-13 01:54:51,640 | INFO     | did not find any defunct processes belonging to 825526
[2026-03-13 01:55:46] 2026-03-13 01:54:51,641 | INFO     | did not find any defunct processes belonging to 825526
[2026-03-13 01:55:46] 2026-03-13 01:54:51,641 | INFO     | ready for new job
[2026-03-13 01:55:46] 2026-03-13 01:54:51,641 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 01:55:46] 2026-03-13 01:54:51,642 | INFO     | **************************************
[2026-03-13 01:55:46] 2026-03-13 01:54:51,642 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 01:55:46] 2026-03-13 01:54:51,642 | INFO     | **************************************
[2026-03-13 01:55:46] 2026-03-13 01:54:51,642 | INFO     | 
[2026-03-13 01:55:46] 2026-03-13 01:54:51,642 | INFO     | pilot is running in a VM
[2026-03-13 01:55:46] 2026-03-13 01:54:51,642 | INFO     | architecture information:
[2026-03-13 01:55:46] 2026-03-13 01:54:51,642 | INFO     | executing command: cat /etc/os-release
[2026-03-13 01:55:46] 2026-03-13 01:54:51,648 | INFO     | cat /etc/os-release:
[2026-03-13 01:55:46] NAME="CentOS Linux"
[2026-03-13 01:55:46] VERSION="7 (Core)"
[2026-03-13 01:55:46] ID="centos"
[2026-03-13 01:55:46] ID_LIKE="rhel fedora"
[2026-03-13 01:55:46] VERSION_ID="7"
[2026-03-13 01:55:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 01:55:46] ANSI_COLOR="0;31"
[2026-03-13 01:55:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 01:55:46] HOME_URL="https://www.centos.org/"
[2026-03-13 01:55:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 01:55:46] 
[2026-03-13 01:55:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 01:55:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 01:55:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 01:55:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 01:55:46] 
[2026-03-13 01:55:46] 2026-03-13 01:54:51,648 | INFO     | **************************************
[2026-03-13 01:55:46] 2026-03-13 01:54:52,151 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-13 01:55:46] 2026-03-13 01:54:52,157 | INFO     | sufficient remaining disk space (64859668480 B)
[2026-03-13 01:55:46] 2026-03-13 01:54:52,157 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 01:55:46] 2026-03-13 01:54:52,157 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 01:55:46] 2026-03-13 01:54:52,157 | INFO     | update_server=False
[2026-03-13 01:55:46] 2026-03-13 01:54:52,157 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 01:55:46] 2026-03-13 01:54:52,157 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 01:55:46] 2026-03-13 01:54:52,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 01:55:46] 2026-03-13 01:54:52,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 01:55:46] 2026-03-13 01:54:52,462 | INFO     | all job control threads have been joined
[2026-03-13 01:55:46] 2026-03-13 01:54:52,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 01:55:46] 2026-03-13 01:54:52,644 | INFO     | aborting loop
[2026-03-13 01:55:46] 2026-03-13 01:54:52,685 | INFO     | all data control threads have been joined
[2026-03-13 01:55:46] 2026-03-13 01:54:52,837 | INFO     | all payload control threads have been joined
[2026-03-13 01:55:46] 2026-03-13 01:54:53,162 | INFO     | [job] retrieve thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:53,163 | INFO     | [job] queue monitor thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:53,467 | INFO     | [job] control thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:53,649 | INFO     | [job] job monitor thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:53,687 | INFO     | [data] control thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:53,842 | INFO     | [payload] control thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:53,902 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:54,004 | INFO     | [job] validate thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:54,052 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:54,106 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:54,106 | INFO     | [data] copytool_in thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:54,163 | INFO     | [data] copytool_out thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:54,367 | INFO     | [payload] validate_post thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:54,636 | INFO     | [payload] failed_post thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:54:56,163 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:55:03,159 | INFO     | job.realtimelogging is not enabled
[2026-03-13 01:55:46] 2026-03-13 01:55:04,164 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 01:55:46] 2026-03-13 01:55:21,947 | INFO     | PID=820948 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-13 01:55:46] 2026-03-13 01:55:21,947 | INFO     | .. there are 2 such processes running
[2026-03-13 01:55:46] 2026-03-13 01:55:21,947 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 01:55:46] 2026-03-13 01:55:21,947 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 01:55:46] 2026-03-13 01:55:21,947 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 01:55:46] 2026-03-13 01:55:40,159 | INFO     | [monitor] cgroup control has ended
[2026-03-13 01:55:46] 2026-03-13 01:55:41,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130339335518016)>', '<ExcThread(monitor, started 130338567223040)>']
[2026-03-13 01:55:46] 2026-03-13 01:55:42,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 01:55:46] 2026-03-13 01:55:42,043 | INFO     | [monitor] control thread has ended
[2026-03-13 01:55:46] 2026-03-13 01:55:46,385 | INFO     | all workflow threads have been joined
[2026-03-13 01:55:46] 2026-03-13 01:55:46,395 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 01:55:46] 2026-03-13 01:55:46,395 | INFO     | traces error code: 0
[2026-03-13 01:55:46] 2026-03-13 01:55:46,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 01:55:46] 2026-03-13 01:55:46,430 [wrapper] ==== pilot stdout END ====
[2026-03-13 01:55:46] 2026-03-13 01:55:46,431 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 01:55:46] 2026-03-13 01:55:46,432 [wrapper] pilotpid: 820948
[2026-03-13 01:55:46] 2026-03-13 01:55:46,433 [wrapper] Pilot exit status: 0
[2026-03-13 01:55:46] 2026-03-13 01:55:46,438 [wrapper] pandaids: 7043304149
[2026-03-13 01:55:46] 2026-03-13 01:55:46,452 [wrapper] cleanup supervisor_pilot  843255 820949
[2026-03-13 01:55:46] 2026-03-13 01:55:46,453 [wrapper] Test setup, not cleaning
[2026-03-13 01:55:46] 2026-03-13 01:55:46,454 [wrapper] apfmon messages muted
[2026-03-13 01:55:46] 2026-03-13 01:55:46,455 [wrapper] ==== wrapper stdout END ====
[2026-03-13 01:55:46] 2026-03-13 01:55:46,456 [wrapper] ==== wrapper stderr END ====
[2026-03-13 01:55:46]  *** Error codes and diagnostics ***
[2026-03-13 01:55:46]     "exeErrorCode": 0,
[2026-03-13 01:55:46]     "exeErrorDiag": "",
[2026-03-13 01:55:46]     "pilotErrorCode": 0,
[2026-03-13 01:55:46]     "pilotErrorDiag": "",
[2026-03-13 01:55:46]  *** Listing of results directory ***
[2026-03-13 01:55:46] total 624952
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc      5111 Mar 12 12:54 queuedata.json
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc    585013 Mar 12 12:54 pilot3.tar.gz
[2026-03-13 01:55:46] -rwx------ 1 boinc boinc     36322 Mar 12 12:54 runpilot2-wrapper.sh
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc       100 Mar 13 01:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 01:55:46] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 01:30 run_atlas
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc       105 Mar 13 01:30 job.xml
[2026-03-13 01:55:46] -rw-r--r-- 2 boinc boinc     15845 Mar 13 01:30 start_atlas.sh
[2026-03-13 01:55:46] drwxrwx--x 2 boinc boinc      4096 Mar 13 01:30 shared
[2026-03-13 01:55:46] -rw-r--r-- 2 boinc boinc    597531 Mar 13 01:30 input.tar.gz
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc      7993 Mar 13 01:30 init_data.xml
[2026-03-13 01:55:46] -rw-r--r-- 2 boinc boinc 448840120 Mar 13 01:30 EVNT.46701403._000911.pool.root.1
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc         0 Mar 13 01:30 boinc_lockfile
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc      2565 Mar 13 01:30 pandaJob.out
[2026-03-13 01:55:46] -rw------- 1 boinc boinc   1006514 Mar 13 01:30 agis_schedconf.cvmfs.json
[2026-03-13 01:55:46] -rw------- 1 boinc boinc   1511578 Mar 13 01:30 agis_ddmendpoints.agis.ALL.json
[2026-03-13 01:55:46] -rw------- 1 boinc boinc       420 Mar 13 01:30 workernode_map.json
[2026-03-13 01:55:46] drwx------ 5 boinc boinc      4096 Mar 13 01:30 pilot3
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc       530 Mar 13 01:54 boinc_task_state.xml
[2026-03-13 01:55:46] -rw------- 1 boinc boinc 185953424 Mar 13 01:54 HITS.48955006._046009.pool.root.1
[2026-03-13 01:55:46] -rw------- 1 boinc boinc        95 Mar 13 01:54 pilot_heartbeat.json
[2026-03-13 01:55:46] -rw------- 1 boinc boinc      1024 Mar 13 01:54 memory_monitor_summary.json
[2026-03-13 01:55:46] -rw------- 1 boinc boinc    354506 Mar 13 01:54 log.48955006._046009.job.log.tgz.1
[2026-03-13 01:55:46] -rw------- 1 boinc boinc      6294 Mar 13 01:54 heartbeat.json
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc      8192 Mar 13 01:55 boinc_mmap_file
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc        27 Mar 13 01:55 wrapper_checkpoint.txt
[2026-03-13 01:55:46] -rw------- 1 boinc boinc      4959 Mar 13 01:55 pilotlog.txt
[2026-03-13 01:55:46] -rw------- 1 boinc boinc    255439 Mar 13 01:55 log.48955006._046009.job.log.1
[2026-03-13 01:55:46] -rw------- 1 boinc boinc       357 Mar 13 01:55 output.list
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc       620 Mar 13 01:55 runtime_log
[2026-03-13 01:55:46] -rw------- 1 boinc boinc    624640 Mar 13 01:55 result.tar.gz
[2026-03-13 01:55:46] -rw------- 1 boinc boinc       641 Mar 13 01:55 Z9ULDmijuK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmXBkLDmGVt7fm.diag
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc      8889 Mar 13 01:55 runtime_log.err
[2026-03-13 01:55:46] -rw-r--r-- 1 boinc boinc     21567 Mar 13 01:55 stderr.txt
[2026-03-13 01:55:46] HITS file was successfully produced:
[2026-03-13 01:55:46] -rw------- 1 boinc boinc 185953424 Mar 13 01:54 shared/HITS.pool.root.1
[2026-03-13 01:55:46]  *** Contents of shared directory: ***
[2026-03-13 01:55:46] total 621140
[2026-03-13 01:55:46] -rw-r--r-- 2 boinc boinc     15845 Mar 13 01:30 start_atlas.sh
[2026-03-13 01:55:46] -rw-r--r-- 2 boinc boinc    597531 Mar 13 01:30 input.tar.gz
[2026-03-13 01:55:46] -rw-r--r-- 2 boinc boinc 448840120 Mar 13 01:30 ATLAS.root_0
[2026-03-13 01:55:46] -rw------- 1 boinc boinc 185953424 Mar 13 01:54 HITS.pool.root.1
[2026-03-13 01:55:46] -rw------- 1 boinc boinc    624640 Mar 13 01:55 result.tar.gz
01:55:48 (816756): run_atlas exited; CPU time 12389.169043
01:55:48 (816756): called boinc_finish(0)

</stderr_txt>
]]>

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