Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
01:06:09 (803536): wrapper (7.7.26015): starting
01:06:09 (803536): wrapper: running run_atlas (--nthreads 12)
[2026-03-13 01:06:09] Arguments: --nthreads 12
[2026-03-13 01:06:09] Threads: 12
[2026-03-13 01:06:09] Checking for CVMFS
[2026-03-13 01:06:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 01:06:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 01:06:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 01:06:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 01:06:09] 2.13.3.0 2263 974 50148 157221 3 188 3664579 4096000 854 130560 0 2382770 99.996 40217 707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-13 01:06:09] CVMFS is ok
[2026-03-13 01:06:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 01:06:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 01:06:09] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-13 01:06:09] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-13 01:06:09] Further information can be found at the LHC@home message board.
[2026-03-13 01:06:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 01:06:09] Checking for apptainer binary...
[2026-03-13 01:06:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 01:06:09] Running /usr/bin/apptainer --version
[2026-03-13 01:06:09] apptainer version 1.4.5
[2026-03-13 01:06:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 01:06:09] test-run
[2026-03-13 01:06:09] apptainer works
[2026-03-13 01:06:09] Set ATHENA_PROC_NUMBER=12
[2026-03-13 01:06:09] Set ATHENA_CORE_NUMBER=12
[2026-03-13 01:06:09] Starting ATLAS job with PandaID=7043234754
[2026-03-13 01:06:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 01:30:22]  *** The last 200 lines of the pilot log: ***
[2026-03-13 01:30:22]  status=None
[2026-03-13 01:30:22]  status_code=0
[2026-03-13 01:30:22]  storage_token=
[2026-03-13 01:30:22]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7043234754/log.48955015._013714.job.log.tgz.1
[2026-03-13 01:30:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/04/log.48955015._013714.job.log.tgz.1
[2026-03-13 01:30:22]  workdir=None
[2026-03-13 01:30:22] ]
[2026-03-13 01:30:22] 2026-03-13 01:29:40,557 | INFO     | transferring file log.48955015._013714.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7043234754/log.48955015._013714.job.log.tgz.1 to /var/lib/boinc
[2026-03-13 01:30:22] 2026-03-13 01:29:40,557 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7043234754/log.48955015._013714.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.489550
[2026-03-13 01:30:22] 2026-03-13 01:29:40,563 | INFO     | adding to output.list: log.48955015._013714.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/04/log.48955015._013714.job.log.tg
[2026-03-13 01:30:22] 2026-03-13 01:29:40,564 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-13 01:30:22] 2026-03-13 01:29:40,564 | INFO     | summary of transferred files:
[2026-03-13 01:30:22] 2026-03-13 01:29:40,564 | INFO     |  -- lfn=log.48955015._013714.job.log.tgz.1, status_code=0, status=transferred
[2026-03-13 01:30:22] 2026-03-13 01:29:40,564 | INFO     | stage-out finished correctly
[2026-03-13 01:30:22] 2026-03-13 01:29:41,279 | INFO     | time since job start (1406s) is within the limit (345600.0s)
[2026-03-13 01:30:22] 2026-03-13 01:29:41,971 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-13 01:30:22] 2026-03-13 01:29:43,039 | INFO     | job 7043234754 has state=finished
[2026-03-13 01:30:22] 2026-03-13 01:29:43,040 | INFO     | preparing for final server update for job 7043234754 in state='finished'
[2026-03-13 01:30:22] 2026-03-13 01:29:43,040 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7043234754/jobReport.json
[2026-03-13 01:30:22] 2026-03-13 01:29:43,040 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-03-13 01:30:22] 2026-03-13 01:29:43,041 | INFO     | this job has now completed (state=finished)
[2026-03-13 01:30:22] 2026-03-13 01:29:43,041 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 01:30:22] 2026-03-13 01:29:43,041 | INFO     | log transfer has been attempted: DONE
[2026-03-13 01:30:22] 2026-03-13 01:29:43,041 | INFO     | job 7043234754 has finished - writing final server update
[2026-03-13 01:30:22] 2026-03-13 01:29:43,041 | INFO     | total number of processed events: 400 (read)
[2026-03-13 01:30:22] 2026-03-13 01:29:43,042 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7043234754/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 01:30:22] 2026-03-13 01:29:43,042 | INFO     | extracted standard info from prmon json
[2026-03-13 01:30:22] 2026-03-13 01:29:43,042 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 01:30:22] 2026-03-13 01:29:43,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 01:30:22] 2026-03-13 01:29:43,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 01:30:22] 2026-03-13 01:29:43,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 01:30:22] 2026-03-13 01:29:43,042 | INFO     | fitting pss+swap vs Time
[2026-03-13 01:30:22] 2026-03-13 01:29:43,042 | INFO     | sum of square deviations: 1265140.0
[2026-03-13 01:30:22] 2026-03-13 01:29:43,042 | INFO     | sum of deviations: 694825685.0
[2026-03-13 01:30:22] 2026-03-13 01:29:43,042 | INFO     | mean x: 1773364750.5
[2026-03-13 01:30:22] 2026-03-13 01:29:43,042 | INFO     | mean y: 2582142.875
[2026-03-13 01:30:22] 2026-03-13 01:29:43,042 | INFO     | intersect: -973944473140.348
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | chi2: 0.2872122505548901
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | current memory leak: 549.21 B/s (using 16 data points, chi2=0.29)
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | could have reported an average CPU frequency of 4291 MHz (4 samples)
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | ..............................
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | . Timing measurements:
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | . get job = 0 s
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | . initial setup = 3 s
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | . payload setup = 1 s
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | . stage-in = 0 s
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | . payload execution = 1390 s
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | . stage-out = 0 s
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | . log creation = 0 s
[2026-03-13 01:30:22] 2026-03-13 01:29:43,043 | INFO     | ..............................
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | 
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | job summary report
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | --------------------------------------------------
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | PanDA job id: 7043234754
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | task id: 48955015
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | errors: (none)
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | pilot state: finished 
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | transexitcode: 0
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | exeerrorcode: 0
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | exeerrordiag: 
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | exitcode: 0
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | exitmsg: OK
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | cpuconsumptiontime: 11972 s
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | nevents: 400
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | neventsw: 0
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | pid: 811959
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | pgrp: 811959
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | corecount: 12
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | event service: False
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | sizes: {0: 2280245, 11: 2280245, 1394: 2305004, 1395: 2314016, 1396: 2314072, 1397: 2314266}
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | --------------------------------------------------
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | 
[2026-03-13 01:30:22] 2026-03-13 01:29:43,062 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | job 7043234754 has completed (purged errors)
[2026-03-13 01:30:22] 2026-03-13 01:29:43,070 | INFO     | overall cleanup function is called
[2026-03-13 01:30:22] 2026-03-13 01:29:44,077 | INFO     | --- collectZombieJob: --- 10, [811959]
[2026-03-13 01:30:22] 2026-03-13 01:29:44,077 | INFO     | zombie collector waiting for pid 811959
[2026-03-13 01:30:22] 2026-03-13 01:29:44,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 01:30:22] 2026-03-13 01:29:44,077 | INFO     | collected zombie processes
[2026-03-13 01:30:22] 2026-03-13 01:29:44,077 | INFO     | will attempt to kill all subprocesses of pid=811959
[2026-03-13 01:30:22] 2026-03-13 01:29:44,099 | INFO     | process IDs to be killed: [811959] (in reverse order)
[2026-03-13 01:30:22] 2026-03-13 01:29:44,115 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 01:30:22] 2026-03-13 01:29:44,115 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 01:30:22] 2026-03-13 01:29:44,115 | INFO     | did not find any defunct processes belonging to 811959
[2026-03-13 01:30:22] 2026-03-13 01:29:44,116 | INFO     | did not find any defunct processes belonging to 811959
[2026-03-13 01:30:22] 2026-03-13 01:29:44,116 | INFO     | ready for new job
[2026-03-13 01:30:22] 2026-03-13 01:29:44,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 01:30:22] 2026-03-13 01:29:44,116 | INFO     | **************************************
[2026-03-13 01:30:22] 2026-03-13 01:29:44,116 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 01:30:22] 2026-03-13 01:29:44,116 | INFO     | **************************************
[2026-03-13 01:30:22] 2026-03-13 01:29:44,116 | INFO     | 
[2026-03-13 01:30:22] 2026-03-13 01:29:44,117 | INFO     | pilot is running in a VM
[2026-03-13 01:30:22] 2026-03-13 01:29:44,117 | INFO     | architecture information:
[2026-03-13 01:30:22] 2026-03-13 01:29:44,117 | INFO     | executing command: cat /etc/os-release
[2026-03-13 01:30:22] 2026-03-13 01:29:44,120 | INFO     | cat /etc/os-release:
[2026-03-13 01:30:22] NAME="CentOS Linux"
[2026-03-13 01:30:22] VERSION="7 (Core)"
[2026-03-13 01:30:22] ID="centos"
[2026-03-13 01:30:22] ID_LIKE="rhel fedora"
[2026-03-13 01:30:22] VERSION_ID="7"
[2026-03-13 01:30:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 01:30:22] ANSI_COLOR="0;31"
[2026-03-13 01:30:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 01:30:22] HOME_URL="https://www.centos.org/"
[2026-03-13 01:30:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 01:30:22] 
[2026-03-13 01:30:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 01:30:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 01:30:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 01:30:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 01:30:22] 
[2026-03-13 01:30:22] 2026-03-13 01:29:44,120 | INFO     | **************************************
[2026-03-13 01:30:22] 2026-03-13 01:29:44,623 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-13 01:30:22] 2026-03-13 01:29:44,637 | INFO     | sufficient remaining disk space (65963819008 B)
[2026-03-13 01:30:22] 2026-03-13 01:29:44,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 01:30:22] 2026-03-13 01:29:44,637 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 01:30:22] 2026-03-13 01:29:44,637 | INFO     | update_server=False
[2026-03-13 01:30:22] 2026-03-13 01:29:44,637 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 01:30:22] 2026-03-13 01:29:44,637 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 01:30:22] 2026-03-13 01:29:44,976 | INFO     | all data control threads have been joined
[2026-03-13 01:30:22] 2026-03-13 01:29:45,539 | INFO     | all payload control threads have been joined
[2026-03-13 01:30:22] 2026-03-13 01:29:45,642 | INFO     | [job] retrieve thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:45,642 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:45,643 | INFO     | [job] queue monitor thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:45,712 | INFO     | [data] copytool_in thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:45,850 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:45,980 | INFO     | [data] control thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:46,089 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 01:30:22] 2026-03-13 01:29:46,169 | INFO     | [payload] validate_post thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:46,184 | WARNING  | process 811959 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 01:30:22] 2026-03-13 01:29:46,204 | INFO     | using path: /var/lib/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 01:30:22] 2026-03-13 01:29:46,204 | INFO     | using path: /var/lib/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 01:30:22] 2026-03-13 01:29:46,205 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-13 01:30:22] 2026-03-13 01:29:46,205 | WARNING  | maxPSS not found in memory monitor output
[2026-03-13 01:30:22] 2026-03-13 01:29:46,205 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/1/PanDA_Pilot-7043234754/payload.stdout) since it has not been created yet
[2026-03-13 01:30:22] 2026-03-13 01:29:46,205 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-13 01:30:22] 2026-03-13 01:29:46,211 | INFO     | sufficient remaining disk space (65963819008 B)
[2026-03-13 01:30:22] 2026-03-13 01:29:46,211 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-13 01:30:22] 2026-03-13 01:29:46,211 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/1/PanDA_Pilot-7043234754/HITS.48955015._013714.pool.root.1 since it does not exist
[2026-03-13 01:30:22] 2026-03-13 01:29:46,229 | INFO     | number of running child processes to parent process 811959: 1
[2026-03-13 01:30:22] 2026-03-13 01:29:46,230 | INFO     | maximum number of monitored processes: 6
[2026-03-13 01:30:22] 2026-03-13 01:29:46,230 | INFO     | aborting job monitoring since job object (job id=7043234754) has expired
[2026-03-13 01:30:22] 2026-03-13 01:29:46,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 01:30:22] 2026-03-13 01:29:46,230 | INFO     | will abort loop
[2026-03-13 01:30:22] 2026-03-13 01:29:46,283 | INFO     | all job control threads have been joined
[2026-03-13 01:30:22] 2026-03-13 01:29:46,346 | INFO     | [payload] failed_post thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:46,544 | INFO     | [payload] control thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:47,073 | INFO     | [job] validate thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:47,090 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:47,235 | INFO     | [job] job monitor thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:47,288 | INFO     | [job] control thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:47,996 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 01:30:22] 2026-03-13 01:29:48,095 | INFO     | [data] copytool_out thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:52,002 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:29:55,253 | INFO     | job.realtimelogging is not enabled
[2026-03-13 01:30:22] 2026-03-13 01:29:56,258 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 01:30:22] 2026-03-13 01:30:14,375 | INFO     | PID=807392 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-13 01:30:22] 2026-03-13 01:30:14,375 | INFO     | .. there are 2 such processes running
[2026-03-13 01:30:22] 2026-03-13 01:30:14,375 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 01:30:22] 2026-03-13 01:30:14,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 01:30:22] 2026-03-13 01:30:14,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 01:30:22] 2026-03-13 01:30:16,457 | INFO     | [monitor] cgroup control has ended
[2026-03-13 01:30:22] 2026-03-13 01:30:17,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130574597621568)>', '<ExcThread(monitor, started 130573968332544)>']
[2026-03-13 01:30:22] 2026-03-13 01:30:18,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 01:30:22] 2026-03-13 01:30:18,395 | INFO     | [monitor] control thread has ended
[2026-03-13 01:30:22] 2026-03-13 01:30:22,849 | INFO     | all workflow threads have been joined
[2026-03-13 01:30:22] 2026-03-13 01:30:22,849 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 01:30:22] 2026-03-13 01:30:22,859 | INFO     | traces error code: 0
[2026-03-13 01:30:22] 2026-03-13 01:30:22,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 01:30:22] 2026-03-13 01:30:22,891 [wrapper] ==== pilot stdout END ====
[2026-03-13 01:30:22] 2026-03-13 01:30:22,893 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 01:30:22] 2026-03-13 01:30:22,894 [wrapper] pilotpid: 807392
[2026-03-13 01:30:22] 2026-03-13 01:30:22,895 [wrapper] Pilot exit status: 0
[2026-03-13 01:30:22] 2026-03-13 01:30:22,899 [wrapper] pandaids: 7043234754
[2026-03-13 01:30:22] 2026-03-13 01:30:22,907 [wrapper] cleanup supervisor_pilot  816620 807393
[2026-03-13 01:30:22] 2026-03-13 01:30:22,908 [wrapper] Test setup, not cleaning
[2026-03-13 01:30:22] 2026-03-13 01:30:22,909 [wrapper] apfmon messages muted
[2026-03-13 01:30:22] 2026-03-13 01:30:22,910 [wrapper] ==== wrapper stdout END ====
[2026-03-13 01:30:22] 2026-03-13 01:30:22,911 [wrapper] ==== wrapper stderr END ====
[2026-03-13 01:30:22]  *** Error codes and diagnostics ***
[2026-03-13 01:30:22]     "exeErrorCode": 0,
[2026-03-13 01:30:22]     "exeErrorDiag": "",
[2026-03-13 01:30:22]     "pilotErrorCode": 0,
[2026-03-13 01:30:22]     "pilotErrorDiag": "",
[2026-03-13 01:30:22]  *** Listing of results directory ***
[2026-03-13 01:30:22] total 619504
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc    585013 Mar 12 12:11 pilot3.tar.gz
[2026-03-13 01:30:22] -rwx------ 1 boinc boinc     36322 Mar 12 12:14 runpilot2-wrapper.sh
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc      5111 Mar 12 12:15 queuedata.json
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc       100 Mar 13 01:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 01:30:22] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 01:06 run_atlas
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc       105 Mar 13 01:06 job.xml
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc      7993 Mar 13 01:06 init_data.xml
[2026-03-13 01:30:22] -rw-r--r-- 2 boinc boinc 443335471 Mar 13 01:06 EVNT.46701403._002328.pool.root.1
[2026-03-13 01:30:22] -rw-r--r-- 2 boinc boinc     15845 Mar 13 01:06 start_atlas.sh
[2026-03-13 01:30:22] drwxrwx--x 2 boinc boinc      4096 Mar 13 01:06 shared
[2026-03-13 01:30:22] -rw-r--r-- 2 boinc boinc    597537 Mar 13 01:06 input.tar.gz
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc         0 Mar 13 01:06 boinc_lockfile
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc      2572 Mar 13 01:06 pandaJob.out
[2026-03-13 01:30:22] -rw------- 1 boinc boinc   1006522 Mar 13 01:06 agis_schedconf.cvmfs.json
[2026-03-13 01:30:22] -rw------- 1 boinc boinc   1511578 Mar 13 01:06 agis_ddmendpoints.agis.ALL.json
[2026-03-13 01:30:22] -rw------- 1 boinc boinc       420 Mar 13 01:06 workernode_map.json
[2026-03-13 01:30:22] drwx------ 5 boinc boinc      4096 Mar 13 01:06 pilot3
[2026-03-13 01:30:22] -rw------- 1 boinc boinc        95 Mar 13 01:29 pilot_heartbeat.json
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc       530 Mar 13 01:29 boinc_task_state.xml
[2026-03-13 01:30:22] -rw------- 1 boinc boinc 185847629 Mar 13 01:29 HITS.48955015._013714.pool.root.1
[2026-03-13 01:30:22] -rw------- 1 boinc boinc      1020 Mar 13 01:29 memory_monitor_summary.json
[2026-03-13 01:30:22] -rw------- 1 boinc boinc    374847 Mar 13 01:29 log.48955015._013714.job.log.tgz.1
[2026-03-13 01:30:22] -rw------- 1 boinc boinc      6289 Mar 13 01:29 heartbeat.json
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc      8192 Mar 13 01:30 boinc_mmap_file
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc        27 Mar 13 01:30 wrapper_checkpoint.txt
[2026-03-13 01:30:22] -rw------- 1 boinc boinc      6477 Mar 13 01:30 pilotlog.txt
[2026-03-13 01:30:22] -rw------- 1 boinc boinc    249475 Mar 13 01:30 log.48955015._013714.job.log.1
[2026-03-13 01:30:22] -rw------- 1 boinc boinc       357 Mar 13 01:30 output.list
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc       620 Mar 13 01:30 runtime_log
[2026-03-13 01:30:22] -rw------- 1 boinc boinc    645120 Mar 13 01:30 result.tar.gz
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc      8889 Mar 13 01:30 runtime_log.err
[2026-03-13 01:30:22] -rw------- 1 boinc boinc       641 Mar 13 01:30 0QJMDma6tK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKrmLDm9thGun.diag
[2026-03-13 01:30:22] -rw-r--r-- 1 boinc boinc     22352 Mar 13 01:30 stderr.txt
[2026-03-13 01:30:22] HITS file was successfully produced:
[2026-03-13 01:30:22] -rw------- 1 boinc boinc 185847629 Mar 13 01:29 shared/HITS.pool.root.1
[2026-03-13 01:30:22]  *** Contents of shared directory: ***
[2026-03-13 01:30:22] total 615680
[2026-03-13 01:30:22] -rw-r--r-- 2 boinc boinc 443335471 Mar 13 01:06 ATLAS.root_0
[2026-03-13 01:30:22] -rw-r--r-- 2 boinc boinc     15845 Mar 13 01:06 start_atlas.sh
[2026-03-13 01:30:22] -rw-r--r-- 2 boinc boinc    597537 Mar 13 01:06 input.tar.gz
[2026-03-13 01:30:22] -rw------- 1 boinc boinc 185847629 Mar 13 01:29 HITS.pool.root.1
[2026-03-13 01:30:22] -rw------- 1 boinc boinc    645120 Mar 13 01:30 result.tar.gz
01:30:24 (803536): run_atlas exited; CPU time 11975.679858
01:30:24 (803536): called boinc_finish(0)

</stderr_txt>
]]>

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