Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:05:09 (495528): wrapper (7.7.26015): starting
10:05:09 (495528): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 10:05:09] Arguments: --nthreads 4
[2026-03-13 10:05:09] Threads: 4
[2026-03-13 10:05:09] Checking for CVMFS
[2026-03-13 10:05:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 10:05:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 10:05:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 10:05:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 10:05:10] 2.9.2.0 3102 3252 94708 157233 3 50 30251297 36864001 0 130560 0 1359741 99.982 121921 4744 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-13 10:05:10] CVMFS is ok
[2026-03-13 10:05:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 10:05:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 10:05:10] Further information can be found at the LHC@home message board.
[2026-03-13 10:05:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 10:05:10] Checking for apptainer binary...
[2026-03-13 10:05:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 10:05:10] Running /usr/bin/apptainer --version
[2026-03-13 10:05:10] apptainer version 1.4.1-1.1
[2026-03-13 10:05:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 10:05:10] thA334
[2026-03-13 10:05:10] apptainer works
[2026-03-13 10:05:10] Set ATHENA_PROC_NUMBER=4
[2026-03-13 10:05:10] Set ATHENA_CORE_NUMBER=4
[2026-03-13 10:05:10] Starting ATLAS job with PandaID=7043304102
[2026-03-13 10:05:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 11:11:47]  *** The last 200 lines of the pilot log: ***
[2026-03-13 11:11:47] 2026-03-13 10:11:15,807 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 11:11:47] 2026-03-13 10:11:15,808 | INFO     | **************************************
[2026-03-13 11:11:47] 2026-03-13 10:11:15,808 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 11:11:47] 2026-03-13 10:11:15,808 | INFO     | **************************************
[2026-03-13 11:11:47] 2026-03-13 10:11:15,808 | INFO     | 
[2026-03-13 11:11:47] 2026-03-13 10:11:15,809 | INFO     | architecture information:
[2026-03-13 11:11:47] 2026-03-13 10:11:15,809 | INFO     | executing command: cat /etc/os-release
[2026-03-13 11:11:47] 2026-03-13 10:11:15,822 | INFO     | cat /etc/os-release:
[2026-03-13 11:11:47] NAME="CentOS Linux"
[2026-03-13 11:11:47] VERSION="7 (Core)"
[2026-03-13 11:11:47] ID="centos"
[2026-03-13 11:11:47] ID_LIKE="rhel fedora"
[2026-03-13 11:11:47] VERSION_ID="7"
[2026-03-13 11:11:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 11:11:47] ANSI_COLOR="0;31"
[2026-03-13 11:11:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 11:11:47] HOME_URL="https://www.centos.org/"
[2026-03-13 11:11:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 11:11:47] 
[2026-03-13 11:11:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 11:11:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 11:11:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 11:11:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 11:11:47] 
[2026-03-13 11:11:47] 2026-03-13 10:11:15,822 | INFO     | **************************************
[2026-03-13 11:11:47] 2026-03-13 10:11:16,325 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-13 11:11:47] 2026-03-13 10:11:16,343 | INFO     | sufficient remaining disk space (226800697344 B)
[2026-03-13 11:11:47] 2026-03-13 10:11:16,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 11:11:47] 2026-03-13 10:11:16,344 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 11:11:47] 2026-03-13 10:11:16,344 | INFO     | update_server=False
[2026-03-13 11:11:47] 2026-03-13 10:11:16,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 11:11:47] 2026-03-13 10:11:16,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 11:11:47] 2026-03-13 10:11:16,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 11:11:47] 2026-03-13 10:11:16,529 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 11:11:47] 2026-03-13 10:11:16,530 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 11:11:47] 2026-03-13 10:11:16,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 11:11:47] 2026-03-13 10:11:16,530 | INFO     | will abort loop
[2026-03-13 11:11:47] 2026-03-13 10:11:16,638 | INFO     | all job control threads have been joined
[2026-03-13 11:11:47] 2026-03-13 10:11:17,342 | INFO     | all data control threads have been joined
[2026-03-13 11:11:47] 2026-03-13 10:11:17,349 | INFO     | [job] retrieve thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:17,350 | INFO     | [job] queue monitor thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:17,535 | INFO     | [job] job monitor thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:17,644 | INFO     | [job] control thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:17,648 | INFO     | all payload control threads have been joined
[2026-03-13 11:11:47] 2026-03-13 10:11:17,662 | INFO     | [payload] validate_post thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:17,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 11:11:47] 2026-03-13 10:11:17,741 | INFO     | [job] validate thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:17,860 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:17,908 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:18,052 | INFO     | [data] copytool_in thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:18,331 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:18,347 | INFO     | [data] control thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:18,654 | INFO     | [payload] control thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:18,727 | INFO     | [payload] failed_post thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:19,721 | INFO     | [data] copytool_out thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:20,351 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:27,145 | INFO     | job.realtimelogging is not enabled
[2026-03-13 11:11:47] 2026-03-13 10:11:27,795 | INFO     | [monitor] cgroup control has ended
[2026-03-13 11:11:47] 2026-03-13 10:11:28,151 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 11:11:47] 2026-03-13 10:11:29,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895786145600)>', '<ExcThread(monitor, started 139894953318144)>']
[2026-03-13 11:11:47] 2026-03-13 10:11:34,514 | INFO     | all workflow threads have been joined
[2026-03-13 11:11:47] 2026-03-13 10:11:34,515 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 11:11:47] 2026-03-13 10:11:34,515 | INFO     | traces error code: 0
[2026-03-13 11:11:47] 2026-03-13 10:11:34,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 11:11:47] 2026-03-13 10:11:46,936 | INFO     | PID=499650 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-13 11:11:47] 2026-03-13 10:11:46,936 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 11:11:47] 2026-03-13 10:11:46,936 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 11:11:47] 2026-03-13 10:11:46,936 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 11:11:47] 2026-03-13 10:11:46,936 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 11:11:47] 2026-03-13 10:11:46,936 | INFO     | [monitor] control thread has ended
[2026-03-13 11:11:47] 2026-03-13 10:11:46,999 [wrapper] ==== pilot stdout END ====
[2026-03-13 11:11:47] 2026-03-13 10:11:47,003 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 11:11:47] 2026-03-13 10:11:47,006 [wrapper] pilotpid: 499650
[2026-03-13 11:11:47] 2026-03-13 10:11:47,010 [wrapper] Pilot exit status: 0
[2026-03-13 11:11:47] 2026-03-13 10:11:47,021 [wrapper] pandaids: 7043304102
[2026-03-13 11:11:47] 2026-03-13 10:11:47,041 [wrapper] cleanup supervisor_pilot  509836 499651
[2026-03-13 11:11:47] 2026-03-13 10:11:47,045 [wrapper] Test setup, not cleaning
[2026-03-13 11:11:47] 2026-03-13 10:11:47,049 [wrapper] apfmon messages muted
[2026-03-13 11:11:47] 2026-03-13 10:11:47,052 [wrapper] ==== wrapper stdout END ====
[2026-03-13 11:11:47] 2026-03-13 10:11:47,056 [wrapper] ==== wrapper stderr END ====
[2026-03-13 11:11:47]  *** Error codes and diagnostics ***
[2026-03-13 11:11:47]     "exeErrorCode": 0,
[2026-03-13 11:11:47]     "exeErrorDiag": "",
[2026-03-13 11:11:47]     "pilotErrorCode": 0,
[2026-03-13 11:11:47]     "pilotErrorDiag": "",
[2026-03-13 11:11:47]  *** Listing of results directory ***
[2026-03-13 11:11:47] total 617444
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc      5111 Mar 12 13:54 queuedata.json
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc    585013 Mar 12 13:54 pilot3.tar.gz
[2026-03-13 11:11:47] -rwx------ 1 boinc boinc     36322 Mar 12 13:54 runpilot2-wrapper.sh
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc       100 Mar 13 10:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 11:11:47] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 10:05 run_atlas
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc       105 Mar 13 10:05 job.xml
[2026-03-13 11:11:47] -rw-r--r-- 2 boinc boinc 440322400 Mar 13 10:05 EVNT.46701403._000910.pool.root.1
[2026-03-13 11:11:47] -rw-r--r-- 2 boinc boinc    597530 Mar 13 10:05 input.tar.gz
[2026-03-13 11:11:47] -rw-r--r-- 2 boinc boinc     15845 Mar 13 10:05 start_atlas.sh
[2026-03-13 11:11:47] drwxrwx--x 2 boinc boinc      4096 Mar 13 10:05 shared
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc         0 Mar 13 10:05 boinc_setup_complete
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc      6369 Mar 13 10:05 init_data.xml
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc         0 Mar 13 10:05 boinc_lockfile
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc      2565 Mar 13 10:05 pandaJob.out
[2026-03-13 11:11:47] -rw------- 1 boinc boinc   1006487 Mar 13 10:05 agis_schedconf.cvmfs.json
[2026-03-13 11:11:47] -rw------- 1 boinc boinc   1511578 Mar 13 10:05 agis_ddmendpoints.agis.ALL.json
[2026-03-13 11:11:47] -rw------- 1 boinc boinc       427 Mar 13 10:05 workernode_map.json
[2026-03-13 11:11:47] drwx------ 5 boinc boinc      4096 Mar 13 10:05 pilot3
[2026-03-13 11:11:47] -rw------- 1 boinc boinc 186292604 Mar 13 11:10 HITS.48955006._045962.pool.root.1
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc       530 Mar 13 11:11 boinc_task_state.xml
[2026-03-13 11:11:47] -rw------- 1 boinc boinc      1020 Mar 13 11:11 memory_monitor_summary.json
[2026-03-13 11:11:47] -rw------- 1 boinc boinc    276465 Mar 13 11:11 log.48955006._045962.job.log.tgz.1
[2026-03-13 11:11:47] -rw------- 1 boinc boinc      6312 Mar 13 11:11 heartbeat.json
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc      8192 Mar 13 11:11 boinc_mmap_file
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc        27 Mar 13 11:11 wrapper_checkpoint.txt
[2026-03-13 11:11:47] -rw------- 1 boinc boinc       746 Mar 13 11:11 pilotlog.txt
[2026-03-13 11:11:47] -rw------- 1 boinc boinc        95 Mar 13 11:11 pilot_heartbeat.json
[2026-03-13 11:11:47] -rw------- 1 boinc boinc    590331 Mar 13 11:11 log.48955006._045962.job.log.1
[2026-03-13 11:11:47] -rw------- 1 boinc boinc       357 Mar 13 11:11 output.list
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc       620 Mar 13 11:11 runtime_log
[2026-03-13 11:11:47] -rw------- 1 boinc boinc    880640 Mar 13 11:11 result.tar.gz
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc      8896 Mar 13 11:11 runtime_log.err
[2026-03-13 11:11:47] -rw------- 1 boinc boinc       657 Mar 13 11:11 UcsKDmijuK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmMvmLDmKpyK3m.diag
[2026-03-13 11:11:47] -rw-r--r-- 1 boinc boinc      9762 Mar 13 11:11 stderr.txt
[2026-03-13 11:11:47] HITS file was successfully produced:
[2026-03-13 11:11:47] -rw------- 1 boinc boinc 186292604 Mar 13 11:10 shared/HITS.pool.root.1
[2026-03-13 11:11:47]  *** Contents of shared directory: ***
[2026-03-13 11:11:47] total 613396
[2026-03-13 11:11:47] -rw-r--r-- 2 boinc boinc 440322400 Mar 13 10:05 ATLAS.root_0
[2026-03-13 11:11:47] -rw-r--r-- 2 boinc boinc    597530 Mar 13 10:05 input.tar.gz
[2026-03-13 11:11:47] -rw-r--r-- 2 boinc boinc     15845 Mar 13 10:05 start_atlas.sh
[2026-03-13 11:11:47] -rw------- 1 boinc boinc 186292604 Mar 13 11:10 HITS.pool.root.1
[2026-03-13 11:11:47] -rw------- 1 boinc boinc    880640 Mar 13 11:11 result.tar.gz
11:11:48 (495528): run_atlas exited; CPU time 14749.490434
11:11:48 (495528): called boinc_finish(0)

</stderr_txt>
]]>

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