Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:40:40 (3926435): wrapper (7.7.26015): starting
17:40:40 (3926435): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 17:40:40] Arguments: --nthreads 4
[2026-03-13 17:40:40] Threads: 4
[2026-03-13 17:40:40] Checking for CVMFS
[2026-03-13 17:40:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 17:40:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 17:40:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 17:40:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 17:40:41] 2.9.2.0 3074 21555 107868 157247 1 50 29653212 36864000 0 130560 0 9844714 99.985 813674 14353 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-13 17:40:41] CVMFS is ok
[2026-03-13 17:40:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 17:40:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 17:40:41] Further information can be found at the LHC@home message board.
[2026-03-13 17:40:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 17:40:41] Checking for apptainer binary...
[2026-03-13 17:40:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 17:40:41] Running /usr/bin/apptainer --version
[2026-03-13 17:40:41] apptainer version 1.4.1-1.1
[2026-03-13 17:40:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 17:40:41] thA314
[2026-03-13 17:40:41] apptainer works
[2026-03-13 17:40:41] Set ATHENA_PROC_NUMBER=4
[2026-03-13 17:40:41] Set ATHENA_CORE_NUMBER=4
[2026-03-13 17:40:41] Starting ATLAS job with PandaID=7043487786
[2026-03-13 17:40:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 18:48:20]  *** The last 200 lines of the pilot log: ***
[2026-03-13 18:48:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 18:48:20] 
[2026-03-13 18:48:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 18:48:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 18:48:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 18:48:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 18:48:20] 
[2026-03-13 18:48:20] 2026-03-13 17:47:50,410 | INFO     | **************************************
[2026-03-13 18:48:20] 2026-03-13 17:47:50,914 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-13 18:48:20] 2026-03-13 17:47:50,931 | INFO     | sufficient remaining disk space (226342469632 B)
[2026-03-13 18:48:20] 2026-03-13 17:47:50,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 18:48:20] 2026-03-13 17:47:50,931 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 18:48:20] 2026-03-13 17:47:50,932 | INFO     | update_server=False
[2026-03-13 18:48:20] 2026-03-13 17:47:50,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 18:48:20] 2026-03-13 17:47:50,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 18:48:20] 2026-03-13 17:47:50,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 18:48:20] 2026-03-13 17:47:51,333 | INFO     | all data control threads have been joined
[2026-03-13 18:48:20] 2026-03-13 17:47:51,911 | INFO     | all job control threads have been joined
[2026-03-13 18:48:20] 2026-03-13 17:47:51,937 | INFO     | [job] retrieve thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:51,937 | INFO     | [job] queue monitor thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:52,330 | INFO     | all payload control threads have been joined
[2026-03-13 18:48:20] 2026-03-13 17:47:52,338 | INFO     | [data] control thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:52,743 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:52,773 | INFO     | [job] validate thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:52,814 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:52,858 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:52,917 | INFO     | [job] control thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:52,925 | INFO     | [data] copytool_in thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:52,938 | INFO     | [data] copytool_out thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:53,072 | INFO     | [payload] validate_post thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:53,227 | INFO     | [payload] failed_post thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:53,336 | INFO     | [payload] control thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:53,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 18:48:20] 2026-03-13 17:47:54,194 | WARNING  | process 3935080 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 18:48:20] 2026-03-13 17:47:54,229 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 18:48:20] 2026-03-13 17:47:54,229 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 18:48:20] 2026-03-13 17:47:54,230 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-13 18:48:20] 2026-03-13 17:47:54,230 | WARNING  | maxPSS not found in memory monitor output
[2026-03-13 18:48:20] 2026-03-13 17:47:54,230 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7043487786/payload.stdout) since it has not been created yet
[2026-03-13 18:48:20] 2026-03-13 17:47:54,230 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-13 18:48:20] 2026-03-13 17:47:54,245 | INFO     | sufficient remaining disk space (226342469632 B)
[2026-03-13 18:48:20] 2026-03-13 17:47:54,245 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-13 18:48:20] 2026-03-13 17:47:54,245 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7043487786/HITS.48955006._046898.pool.root.1 since it does not exist
[2026-03-13 18:48:20] 2026-03-13 17:47:54,289 | INFO     | number of running child processes to parent process 3935080: 1
[2026-03-13 18:48:20] 2026-03-13 17:47:54,289 | INFO     | maximum number of monitored processes: 6
[2026-03-13 18:48:20] 2026-03-13 17:47:54,290 | INFO     | aborting job monitoring since job object (job id=7043487786) has expired
[2026-03-13 18:48:20] 2026-03-13 17:47:54,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 18:48:20] 2026-03-13 17:47:54,290 | INFO     | will abort loop
[2026-03-13 18:48:20] 2026-03-13 17:47:55,295 | INFO     | [job] job monitor thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:47:57,088 | INFO     | [monitor] cgroup control has ended
[2026-03-13 18:48:20] 2026-03-13 17:47:57,765 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:48:01,808 | INFO     | job.realtimelogging is not enabled
[2026-03-13 18:48:20] 2026-03-13 17:48:02,813 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 18:48:20] 2026-03-13 17:48:04,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140248001967936)>', '<ExcThread(monitor, started 140247392319232)>']
[2026-03-13 18:48:20] 2026-03-13 17:48:09,855 | INFO     | all workflow threads have been joined
[2026-03-13 18:48:20] 2026-03-13 17:48:09,856 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 18:48:20] 2026-03-13 17:48:09,857 | INFO     | traces error code: 0
[2026-03-13 18:48:20] 2026-03-13 17:48:09,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 18:48:20] 2026-03-13 17:48:20,716 | INFO     | PID=3930565 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 18:48:20] 2026-03-13 17:48:20,717 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 18:48:20] 2026-03-13 17:48:20,717 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 18:48:20] 2026-03-13 17:48:20,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 18:48:20] 2026-03-13 17:48:20,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 18:48:20] 2026-03-13 17:48:20,717 | INFO     | [monitor] control thread has ended
[2026-03-13 18:48:20] 2026-03-13 17:48:20,792 [wrapper] ==== pilot stdout END ====
[2026-03-13 18:48:20] 2026-03-13 17:48:20,796 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 18:48:20] 2026-03-13 17:48:20,800 [wrapper] pilotpid: 3930565
[2026-03-13 18:48:20] 2026-03-13 17:48:20,803 [wrapper] Pilot exit status: 0
[2026-03-13 18:48:20] 2026-03-13 17:48:20,814 [wrapper] pandaids: 7043487786
[2026-03-13 18:48:20] 2026-03-13 17:48:20,836 [wrapper] cleanup supervisor_pilot 3941039 3930566
[2026-03-13 18:48:20] 2026-03-13 17:48:20,840 [wrapper] Test setup, not cleaning
[2026-03-13 18:48:20] 2026-03-13 17:48:20,844 [wrapper] apfmon messages muted
[2026-03-13 18:48:20] 2026-03-13 17:48:20,848 [wrapper] ==== wrapper stdout END ====
[2026-03-13 18:48:20] 2026-03-13 17:48:20,851 [wrapper] ==== wrapper stderr END ====
[2026-03-13 18:48:20]  *** Error codes and diagnostics ***
[2026-03-13 18:48:20]     "exeErrorCode": 0,
[2026-03-13 18:48:20]     "exeErrorDiag": "",
[2026-03-13 18:48:20]     "pilotErrorCode": 0,
[2026-03-13 18:48:20]     "pilotErrorDiag": "",
[2026-03-13 18:48:20]  *** Listing of results directory ***
[2026-03-13 18:48:20] total 614540
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc    585013 Mar 12 19:04 pilot3.tar.gz
[2026-03-13 18:48:20] -rwx------ 1 boinc boinc     36322 Mar 12 19:04 runpilot2-wrapper.sh
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc      5111 Mar 12 19:05 queuedata.json
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc       100 Mar 13 17:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 18:48:20] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 17:40 run_atlas
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc       105 Mar 13 17:40 job.xml
[2026-03-13 18:48:20] -rw-r--r-- 2 boinc boinc 441765747 Mar 13 17:40 EVNT.46701403._000928.pool.root.1
[2026-03-13 18:48:20] -rw-r--r-- 2 boinc boinc    597530 Mar 13 17:40 input.tar.gz
[2026-03-13 18:48:20] -rw-r--r-- 2 boinc boinc     15845 Mar 13 17:40 start_atlas.sh
[2026-03-13 18:48:20] drwxrwx--x 2 boinc boinc      4096 Mar 13 17:40 shared
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc         0 Mar 13 17:40 boinc_setup_complete
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc      6376 Mar 13 17:40 init_data.xml
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc         0 Mar 13 17:40 boinc_lockfile
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc      2565 Mar 13 17:40 pandaJob.out
[2026-03-13 18:48:20] -rw------- 1 boinc boinc   1006597 Mar 13 17:40 agis_schedconf.cvmfs.json
[2026-03-13 18:48:20] -rw------- 1 boinc boinc   1511579 Mar 13 17:40 agis_ddmendpoints.agis.ALL.json
[2026-03-13 18:48:20] -rw------- 1 boinc boinc       420 Mar 13 17:40 workernode_map.json
[2026-03-13 18:48:20] drwx------ 5 boinc boinc      4096 Mar 13 17:40 pilot3
[2026-03-13 18:48:20] -rw------- 1 boinc boinc 181836159 Mar 13 18:47 HITS.48955006._046898.pool.root.1
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc       530 Mar 13 18:47 boinc_task_state.xml
[2026-03-13 18:48:20] -rw------- 1 boinc boinc      1021 Mar 13 18:47 memory_monitor_summary.json
[2026-03-13 18:48:20] -rw------- 1 boinc boinc    286598 Mar 13 18:47 log.48955006._046898.job.log.tgz.1
[2026-03-13 18:48:20] -rw------- 1 boinc boinc      6312 Mar 13 18:47 heartbeat.json
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc      8192 Mar 13 18:47 boinc_mmap_file
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc        27 Mar 13 18:47 wrapper_checkpoint.txt
[2026-03-13 18:48:20] -rw------- 1 boinc boinc       747 Mar 13 18:48 pilotlog.txt
[2026-03-13 18:48:20] -rw------- 1 boinc boinc        95 Mar 13 18:48 pilot_heartbeat.json
[2026-03-13 18:48:20] -rw------- 1 boinc boinc    599626 Mar 13 18:48 log.48955006._046898.job.log.1
[2026-03-13 18:48:20] -rw------- 1 boinc boinc       357 Mar 13 18:48 output.list
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc       620 Mar 13 18:48 runtime_log
[2026-03-13 18:48:20] -rw------- 1 boinc boinc    901120 Mar 13 18:48 result.tar.gz
[2026-03-13 18:48:20] -rw------- 1 boinc boinc       657 Mar 13 18:48 yX7MDmDazK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmAtkLDmPJTzwn.diag
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc      8896 Mar 13 18:48 runtime_log.err
[2026-03-13 18:48:20] -rw-r--r-- 1 boinc boinc     10178 Mar 13 18:48 stderr.txt
[2026-03-13 18:48:20] HITS file was successfully produced:
[2026-03-13 18:48:20] -rw------- 1 boinc boinc 181836159 Mar 13 18:47 shared/HITS.pool.root.1
[2026-03-13 18:48:20]  *** Contents of shared directory: ***
[2026-03-13 18:48:20] total 610476
[2026-03-13 18:48:20] -rw-r--r-- 2 boinc boinc 441765747 Mar 13 17:40 ATLAS.root_0
[2026-03-13 18:48:20] -rw-r--r-- 2 boinc boinc    597530 Mar 13 17:40 input.tar.gz
[2026-03-13 18:48:20] -rw-r--r-- 2 boinc boinc     15845 Mar 13 17:40 start_atlas.sh
[2026-03-13 18:48:20] -rw------- 1 boinc boinc 181836159 Mar 13 18:47 HITS.pool.root.1
[2026-03-13 18:48:20] -rw------- 1 boinc boinc    901120 Mar 13 18:48 result.tar.gz
18:48:22 (3926435): run_atlas exited; CPU time 14912.778861
18:48:22 (3926435): called boinc_finish(0)

</stderr_txt>
]]>

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