Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:19:20 (4188718): wrapper (7.7.26015): starting
14:19:20 (4188718): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 14:19:20] Arguments: --nthreads 8
[2026-03-12 14:19:20] Threads: 8
[2026-03-12 14:19:20] Checking for CVMFS
[2026-03-12 14:19:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 14:19:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 14:19:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 14:19:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 14:19:22] 2.13.3.0 424664 51739 395416 157211 1 147 27770993 32935936 55369 16776704 1 214903367 99.507 257989629 14977 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 14:19:22] CVMFS is ok
[2026-03-12 14:19:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 14:19:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 14:19:22] Further information can be found at the LHC@home message board.
[2026-03-12 14:19:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 14:19:22] Checking for apptainer binary...
[2026-03-12 14:19:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 14:19:22] Running /usr/bin/apptainer --version
[2026-03-12 14:19:22] apptainer version 1.4.5-2.el9
[2026-03-12 14:19:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 14:19:23] c6-12-29-3.aglt2.org
[2026-03-12 14:19:23] apptainer works
[2026-03-12 14:19:23] Set ATHENA_PROC_NUMBER=8
[2026-03-12 14:19:23] Set ATHENA_CORE_NUMBER=8
[2026-03-12 14:19:23] Starting ATLAS job with PandaID=7043303983
[2026-03-12 14:19:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 18:51:43]  *** The last 200 lines of the pilot log: ***
[2026-03-12 18:51:43] 2026-03-12 22:51:07,437 | INFO     | job 7043303983 has state=finished
[2026-03-12 18:51:43] 2026-03-12 22:51:07,437 | INFO     | preparing for final server update for job 7043303983 in state='finished'
[2026-03-12 18:51:43] 2026-03-12 22:51:07,437 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7043303983/jobReport.json
[2026-03-12 18:51:43] 2026-03-12 22:51:07,440 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-12 18:51:43] 2026-03-12 22:51:07,441 | INFO     | this job has now completed (state=finished)
[2026-03-12 18:51:43] 2026-03-12 22:51:07,441 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 18:51:43] 2026-03-12 22:51:07,441 | INFO     | log transfer has been attempted: DONE
[2026-03-12 18:51:43] 2026-03-12 22:51:07,441 | INFO     | job 7043303983 has finished - writing final server update
[2026-03-12 18:51:43] 2026-03-12 22:51:07,441 | INFO     | total number of processed events: 400 (read)
[2026-03-12 18:51:43] 2026-03-12 22:51:07,467 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7043303983/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 18:51:43] 2026-03-12 22:51:07,468 | INFO     | extracted standard info from prmon json
[2026-03-12 18:51:43] 2026-03-12 22:51:07,468 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 18:51:43] 2026-03-12 22:51:07,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 18:51:43] 2026-03-12 22:51:07,469 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 18:51:43] 2026-03-12 22:51:07,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 18:51:43] 2026-03-12 22:51:07,473 | INFO     | fitting pss+swap vs Time
[2026-03-12 18:51:43] 2026-03-12 22:51:07,474 | INFO     | sum of square deviations: 5770261793.184953
[2026-03-12 18:51:43] 2026-03-12 22:51:07,475 | INFO     | sum of deviations: 92496905967.5018
[2026-03-12 18:51:43] 2026-03-12 22:51:07,475 | INFO     | mean x: 1773347782.3924527
[2026-03-12 18:51:43] 2026-03-12 22:51:07,476 | INFO     | mean y: 2445220.3509433963
[2026-03-12 18:51:43] 2026-03-12 22:51:07,476 | INFO     | intersect: -28424199697.10522
[2026-03-12 18:51:43] 2026-03-12 22:51:07,476 | INFO     | chi2: 4.013010770525806
[2026-03-12 18:51:43] 2026-03-12 22:51:07,476 | INFO     | sum of square deviations: 5449785177.399963
[2026-03-12 18:51:43] 2026-03-12 22:51:07,481 | INFO     | sum of deviations: 108267758748.19995
[2026-03-12 18:51:43] 2026-03-12 22:51:07,481 | INFO     | mean x: 1773347629.9
[2026-03-12 18:51:43] 2026-03-12 22:51:07,482 | INFO     | mean y: 2452595.969230769
[2026-03-12 18:51:43] 2026-03-12 22:51:07,482 | INFO     | intersect: -35227628429.40889
[2026-03-12 18:51:43] 2026-03-12 22:51:07,482 | INFO     | chi2: 3.2384807433055345
[2026-03-12 18:51:43] 2026-03-12 22:51:07,482 | INFO     | current chi2=3.2384807433055345 (change=19.300472176873544 %)
[2026-03-12 18:51:43] 2026-03-12 22:51:07,482 | INFO     | right removable region: 259
[2026-03-12 18:51:43] 2026-03-12 22:51:07,483 | INFO     | sum of square deviations: 5449721737.399963
[2026-03-12 18:51:43] 2026-03-12 22:51:07,484 | INFO     | sum of deviations: 21921121001.600006
[2026-03-12 18:51:43] 2026-03-12 22:51:07,484 | INFO     | mean x: 1773347934.9
[2026-03-12 18:51:43] 2026-03-12 22:51:07,484 | INFO     | mean y: 2478714.869230769
[2026-03-12 18:51:43] 2026-03-12 22:51:07,485 | INFO     | intersect: -7130688175.487796
[2026-03-12 18:51:43] 2026-03-12 22:51:07,489 | INFO     | chi2: 1.2356518325139638
[2026-03-12 18:51:43] 2026-03-12 22:51:07,489 | INFO     | current chi2=1.2356518325139638 (change=69.2088583068502 %)
[2026-03-12 18:51:43] 2026-03-12 22:51:07,490 | INFO     | sum of square deviations: 5141290791.396086
[2026-03-12 18:51:43] 2026-03-12 22:51:07,491 | INFO     | sum of deviations: -631029922.1843109
[2026-03-12 18:51:43] 2026-03-12 22:51:07,491 | INFO     | mean x: 1773348087.4039216
[2026-03-12 18:51:43] 2026-03-12 22:51:07,492 | INFO     | mean y: 2489835.5843137256
[2026-03-12 18:51:43] 2026-03-12 22:51:07,492 | INFO     | intersect: 220146402.97258353
[2026-03-12 18:51:43] 2026-03-12 22:51:07,492 | INFO     | chi2: 0.9635900478762305
[2026-03-12 18:51:43] 2026-03-12 22:51:07,492 | INFO     | current chi2=0.9635900478762305 (change=22.017673383303855 %)
[2026-03-12 18:51:43] 2026-03-12 22:51:07,492 | INFO     | left removable region: 20
[2026-03-12 18:51:43] 2026-03-12 22:51:07,493 | INFO     | sum of square deviations: 4232910752.1589885
[2026-03-12 18:51:43] 2026-03-12 22:51:07,504 | INFO     | sum of deviations: -4663914803.435143
[2026-03-12 18:51:43] 2026-03-12 22:51:07,504 | INFO     | mean x: 1773348209.41841
[2026-03-12 18:51:43] 2026-03-12 22:51:07,504 | INFO     | mean y: 2509808.644351464
[2026-03-12 18:51:43] 2026-03-12 22:51:07,505 | INFO     | intersect: 1956424136.1158788
[2026-03-12 18:51:43] 2026-03-12 22:51:07,505 | INFO     | chi2: 0.03530385751972952
[2026-03-12 18:51:43] 2026-03-12 22:51:07,505 | INFO     | current memory leak: -1.10 B/s (using 239 data points, chi2=0.04)
[2026-03-12 18:51:43] 2026-03-12 22:51:07,506 | INFO     | could have reported an average CPU frequency of 2849 MHz (12 samples)
[2026-03-12 18:51:43] 2026-03-12 22:51:07,506 | INFO     | ..............................
[2026-03-12 18:51:43] 2026-03-12 22:51:07,506 | INFO     | . Timing measurements:
[2026-03-12 18:51:43] 2026-03-12 22:51:07,506 | INFO     | . get job = 0 s
[2026-03-12 18:51:43] 2026-03-12 22:51:07,506 | INFO     | . initial setup = 34 s
[2026-03-12 18:51:43] 2026-03-12 22:51:07,506 | INFO     | . payload setup = 37 s
[2026-03-12 18:51:43] 2026-03-12 22:51:07,506 | INFO     | . stage-in = 0 s
[2026-03-12 18:51:43] 2026-03-12 22:51:07,506 | INFO     | . payload execution = 16153 s
[2026-03-12 18:51:43] 2026-03-12 22:51:07,506 | INFO     | . stage-out = 4 s
[2026-03-12 18:51:43] 2026-03-12 22:51:07,507 | INFO     | . log creation = 0 s
[2026-03-12 18:51:43] 2026-03-12 22:51:07,507 | INFO     | ..............................
[2026-03-12 18:51:43] 2026-03-12 22:51:07,959 | INFO     | PID=1839 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 18:51:43] 2026-03-12 22:51:07,959 | INFO     | .. there are 78 such processes running
[2026-03-12 18:51:43] 2026-03-12 22:51:07,977 | INFO     | 
[2026-03-12 18:51:43] 2026-03-12 22:51:07,977 | INFO     | job summary report
[2026-03-12 18:51:43] 2026-03-12 22:51:07,977 | INFO     | --------------------------------------------------
[2026-03-12 18:51:43] 2026-03-12 22:51:07,977 | INFO     | PanDA job id: 7043303983
[2026-03-12 18:51:43] 2026-03-12 22:51:07,977 | INFO     | task id: 48955006
[2026-03-12 18:51:43] 2026-03-12 22:51:07,977 | INFO     | errors: (none)
[2026-03-12 18:51:43] 2026-03-12 22:51:07,977 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | pilot state: finished 
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | transexitcode: 0
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | exeerrorcode: 0
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | exeerrordiag: 
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | exitcode: 0
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | exitmsg: OK
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | cpuconsumptiontime: 37978 s
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | nevents: 400
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | neventsw: 0
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | pid: 9420
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | pgrp: 9420
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | corecount: 8
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | event service: False
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | sizes: {0: 2279741, 1: 2279797, 2: 2279853, 3: 2241824, 4: 2280314, 5: 2280342, 16194: 2311830, 16200: 2320884, 16203: 2321022}
[2026-03-12 18:51:43] 2026-03-12 22:51:07,978 | INFO     | --------------------------------------------------
[2026-03-12 18:51:43] 2026-03-12 22:51:07,979 | INFO     | 
[2026-03-12 18:51:43] 2026-03-12 22:51:07,979 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 18:51:43] 2026-03-12 22:51:08,140 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,141 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,141 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,141 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,141 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,141 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,141 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,141 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,141 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,141 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,142 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 18:51:43] 2026-03-12 22:51:08,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,142 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 18:51:43] 2026-03-12 22:51:08,142 | INFO     | job 7043303983 has completed (purged errors)
[2026-03-12 18:51:43] 2026-03-12 22:51:08,142 | INFO     | overall cleanup function is called
[2026-03-12 18:51:43] 2026-03-12 22:51:09,157 | INFO     | --- collectZombieJob: --- 10, [9420]
[2026-03-12 18:51:43] 2026-03-12 22:51:09,157 | INFO     | zombie collector waiting for pid 9420
[2026-03-12 18:51:43] 2026-03-12 22:51:09,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 18:51:43] 2026-03-12 22:51:09,157 | INFO     | collected zombie processes
[2026-03-12 18:51:43] 2026-03-12 22:51:09,157 | INFO     | will attempt to kill all subprocesses of pid=9420
[2026-03-12 18:51:43] 2026-03-12 22:51:09,859 | INFO     | process IDs to be killed: [9420] (in reverse order)
[2026-03-12 18:51:43] 2026-03-12 22:51:10,524 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 18:51:43] 2026-03-12 22:51:10,524 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 18:51:43] 2026-03-12 22:51:10,602 | INFO     | did not find any defunct processes belonging to 9420
[2026-03-12 18:51:43] 2026-03-12 22:51:10,673 | INFO     | did not find any defunct processes belonging to 9420
[2026-03-12 18:51:43] 2026-03-12 22:51:10,674 | INFO     | ready for new job
[2026-03-12 18:51:43] 2026-03-12 22:51:10,674 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 18:51:43] 2026-03-12 22:51:10,676 | INFO     | **************************************
[2026-03-12 18:51:43] 2026-03-12 22:51:10,676 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 18:51:43] 2026-03-12 22:51:10,677 | INFO     | **************************************
[2026-03-12 18:51:43] 2026-03-12 22:51:10,677 | INFO     | 
[2026-03-12 18:51:43] 2026-03-12 22:51:10,681 | INFO     | architecture information:
[2026-03-12 18:51:43] 2026-03-12 22:51:10,682 | INFO     | executing command: cat /etc/os-release
[2026-03-12 18:51:43] 2026-03-12 22:51:10,815 | INFO     | cat /etc/os-release:
[2026-03-12 18:51:43] NAME="CentOS Linux"
[2026-03-12 18:51:43] VERSION="7 (Core)"
[2026-03-12 18:51:43] ID="centos"
[2026-03-12 18:51:43] ID_LIKE="rhel fedora"
[2026-03-12 18:51:43] VERSION_ID="7"
[2026-03-12 18:51:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 18:51:43] ANSI_COLOR="0;31"
[2026-03-12 18:51:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 18:51:43] HOME_URL="https://www.centos.org/"
[2026-03-12 18:51:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 18:51:43] 
[2026-03-12 18:51:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 18:51:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 18:51:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 18:51:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 18:51:43] 
[2026-03-12 18:51:43] 2026-03-12 22:51:10,815 | INFO     | **************************************
[2026-03-12 18:51:43] 2026-03-12 22:51:11,326 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 18:51:43] 2026-03-12 22:51:11,458 | INFO     | sufficient remaining disk space (93139763200 B)
[2026-03-12 18:51:43] 2026-03-12 22:51:11,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 18:51:43] 2026-03-12 22:51:11,458 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 18:51:43] 2026-03-12 22:51:11,458 | INFO     | update_server=False
[2026-03-12 18:51:43] 2026-03-12 22:51:11,458 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 18:51:43] 2026-03-12 22:51:11,459 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 18:51:43] 2026-03-12 22:51:11,459 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:51:43] 2026-03-12 22:51:11,459 | INFO     | aborting loop
[2026-03-12 18:51:43] 2026-03-12 22:51:12,306 | INFO     | all payload control threads have been joined
[2026-03-12 18:51:43] 2026-03-12 22:51:12,331 | INFO     | all job control threads have been joined
[2026-03-12 18:51:43] 2026-03-12 22:51:12,464 | INFO     | [job] retrieve thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:12,465 | INFO     | [job] job monitor thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:12,476 | INFO     | all data control threads have been joined
[2026-03-12 18:51:43] 2026-03-12 22:51:12,556 | INFO     | [job] validate thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:12,556 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:12,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 18:51:43] 2026-03-12 22:51:13,003 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:51:43] 2026-03-12 22:51:13,154 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:13,312 | INFO     | [payload] control thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:13,337 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:13,338 | INFO     | [payload] validate_post thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:13,338 | INFO     | [job] control thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:13,482 | INFO     | [data] control thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:13,845 | INFO     | [payload] failed_post thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:13,858 | INFO     | [data] copytool_in thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:13,858 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:14,009 | INFO     | [job] queue monitor thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:14,713 | INFO     | [data] copytool_out thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:15,469 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 18:51:43] 2026-03-12 22:51:28,517 | INFO     | [monitor] cgroup control has ended
[2026-03-12 18:51:43] 2026-03-12 22:51:30,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139821479749440)>', '<ExcThread(monitor, started 139820831594240)>']
[2026-03-12 18:51:43] 2026-03-12 22:51:35,265 | INFO     | all workflow threads have been joined
[2026-03-12 18:51:43] 2026-03-12 22:51:35,265 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 18:51:43] 2026-03-12 22:51:35,265 | INFO     | traces error code: 0
[2026-03-12 18:51:43] 2026-03-12 22:51:35,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 18:51:43] 2026-03-12 22:51:41,434 | INFO     | PID=1839 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-12 18:51:43] 2026-03-12 22:51:41,434 | INFO     | .. there are 78 such processes running
[2026-03-12 18:51:43] 2026-03-12 22:51:41,435 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 18:51:43] 2026-03-12 22:51:41,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 18:51:43] 2026-03-12 22:51:41,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 18:51:43] 2026-03-12 22:51:41,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 18:51:43] 2026-03-12 22:51:41,435 | INFO     | [monitor] control thread has ended
[2026-03-12 18:51:43] 2026-03-12 22:51:41,806 [wrapper] ==== pilot stdout END ====
[2026-03-12 18:51:43] 2026-03-12 22:51:41,862 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 18:51:43] 2026-03-12 22:51:41,885 [wrapper] pilotpid: 1839
[2026-03-12 18:51:43] 2026-03-12 22:51:41,918 [wrapper] Pilot exit status: 0
[2026-03-12 18:51:43] 2026-03-12 22:51:42,103 [wrapper] pandaids: 7043303983
[2026-03-12 18:51:43] 2026-03-12 22:51:42,632 [wrapper] cleanup supervisor_pilot 1362738 1840
[2026-03-12 18:51:43] 2026-03-12 22:51:42,653 [wrapper] Test setup, not cleaning
[2026-03-12 18:51:43] 2026-03-12 22:51:42,694 [wrapper] apfmon messages muted
[2026-03-12 18:51:43] 2026-03-12 22:51:42,718 [wrapper] ==== wrapper stdout END ====
[2026-03-12 18:51:43] 2026-03-12 22:51:42,750 [wrapper] ==== wrapper stderr END ====
[2026-03-12 18:51:43]  *** Error codes and diagnostics ***
[2026-03-12 18:51:43]     "exeErrorCode": 0,
[2026-03-12 18:51:43]     "exeErrorDiag": "",
[2026-03-12 18:51:43]     "pilotErrorCode": 0,
[2026-03-12 18:51:43]     "pilotErrorDiag": "",
[2026-03-12 18:51:43]  *** Listing of results directory ***
[2026-03-12 18:51:43] total 614136
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 08:54 queuedata.json
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 08:54 pilot3.tar.gz
[2026-03-12 18:51:43] -rwx------. 1 boincer umatlas     36322 Mar 12 08:54 runpilot2-wrapper.sh
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas       100 Mar 12 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 18:51:43] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 14:19 run_atlas
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas       105 Mar 12 14:19 job.xml
[2026-03-12 18:51:43] -rw-r--r--. 2 boincer umatlas 437945429 Mar 12 14:19 EVNT.46701403._000908.pool.root.1
[2026-03-12 18:51:43] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 14:19 start_atlas.sh
[2026-03-12 18:51:43] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 14:19 shared
[2026-03-12 18:51:43] -rw-r--r--. 2 boincer umatlas    597526 Mar 12 14:19 input.tar.gz
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas         0 Mar 12 14:19 boinc_lockfile
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas      2564 Mar 12 14:19 pandaJob.out
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas        57 Mar 12 14:19 setup.sh.local
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas   1006522 Mar 12 14:20 agis_schedconf.cvmfs.json
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas       444 Mar 12 14:20 workernode_map.json
[2026-03-12 18:51:43] drwx------. 5 boincer umatlas      4096 Mar 12 14:20 pilot3
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas      6880 Mar 12 18:45 init_data.xml
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas 182295070 Mar 12 18:49 HITS.48955006._045843.pool.root.1
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas       531 Mar 12 18:50 boinc_task_state.xml
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas      1044 Mar 12 18:50 memory_monitor_summary.json
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas   1511578 Mar 12 18:51 agis_ddmendpoints.agis.ALL.json
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas    465432 Mar 12 18:51 log.48955006._045843.job.log.tgz.1
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas      6402 Mar 12 18:51 heartbeat.json
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas        95 Mar 12 18:51 pilot_heartbeat.json
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas       820 Mar 12 18:51 pilotlog.txt
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas   1881501 Mar 12 18:51 log.48955006._045843.job.log.1
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas        28 Mar 12 18:51 wrapper_checkpoint.txt
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 18:51 boinc_mmap_file
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas       357 Mar 12 18:51 output.list
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas       620 Mar 12 18:51 runtime_log
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas   2365440 Mar 12 18:51 result.tar.gz
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas      9352 Mar 12 18:51 runtime_log.err
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas       658 Mar 12 18:51 DSBNDmZjuK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmutmLDmjOVLnm.diag
[2026-03-12 18:51:43] -rw-r--r--. 1 boincer umatlas     21386 Mar 12 18:51 stderr.txt
[2026-03-12 18:51:43] HITS file was successfully produced:
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas 182295070 Mar 12 18:49 shared/HITS.pool.root.1
[2026-03-12 18:51:43]  *** Contents of shared directory: ***
[2026-03-12 18:51:43] total 608628
[2026-03-12 18:51:43] -rw-r--r--. 2 boincer umatlas 437945429 Mar 12 14:19 ATLAS.root_0
[2026-03-12 18:51:43] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 14:19 start_atlas.sh
[2026-03-12 18:51:43] -rw-r--r--. 2 boincer umatlas    597526 Mar 12 14:19 input.tar.gz
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas 182295070 Mar 12 18:49 HITS.pool.root.1
[2026-03-12 18:51:43] -rw-------. 1 boincer umatlas   2365440 Mar 12 18:51 result.tar.gz
18:51:45 (4188718): run_atlas exited; CPU time 38996.203392
18:51:45 (4188718): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN