Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:21:41 (2773179): wrapper (7.7.26015): starting
06:21:41 (2773179): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 06:21:41] Arguments: --nthreads 4
[2026-03-14 06:21:41] Threads: 4
[2026-03-14 06:21:41] Checking for CVMFS
[2026-03-14 06:21:41] No cvmfs_config command found, will try listing directly
[2026-03-14 06:21:41] CVMFS is ok
[2026-03-14 06:21:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 06:21:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 06:21:41] Further information can be found at the LHC@home message board.
[2026-03-14 06:21:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 06:21:41] Checking for apptainer binary...
[2026-03-14 06:21:41] which: no apptainer in ((null))
[2026-03-14 06:21:41] apptainer is not installed, using version from CVMFS
[2026-03-14 06:21:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 06:21:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot224/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-14 06:21:41] apptainer works
[2026-03-14 06:21:41] Set ATHENA_PROC_NUMBER=4
[2026-03-14 06:21:41] Set ATHENA_CORE_NUMBER=4
[2026-03-14 06:21:41] Starting ATLAS job with PandaID=7043441415
[2026-03-14 06:21:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot224/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 07:41:14]  *** The last 200 lines of the pilot log: ***
[2026-03-14 07:41:14]  filesize=267942
[2026-03-14 07:41:14]  filetype=log
[2026-03-14 07:41:14]  guid=a5e32a94-9afb-4d71-83de-6fe8b8632cc6
[2026-03-14 07:41:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 07:41:14]  is_altstaged=None
[2026-03-14 07:41:14]  is_tar=False
[2026-03-14 07:41:14]  lfn=log.48955006._046517.job.log.tgz.1
[2026-03-14 07:41:14]  mtime=0
[2026-03-14 07:41:14]  protocol_id=None
[2026-03-14 07:41:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 07:41:14]  replicas=None
[2026-03-14 07:41:14]  scope=mc23_13p6TeV
[2026-03-14 07:41:14]  status=None
[2026-03-14 07:41:14]  status_code=0
[2026-03-14 07:41:14]  storage_token=
[2026-03-14 07:41:14]  surl=/var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7043441415/log.48955006._046517.job.log.tgz.1
[2026-03-14 07:41:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/df/log.48955006._046517.job.log.tgz.1
[2026-03-14 07:41:14]  workdir=None
[2026-03-14 07:41:14] ]
[2026-03-14 07:41:14] 2026-03-14 06:40:21,936 | INFO     | transferring file log.48955006._046517.job.log.tgz.1 from /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7043441415/log.48955006._046517.job.log.tgz.1 to /var/lib/
[2026-03-14 07:41:14] 2026-03-14 06:40:21,937 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7043441415/log.48955006._046517.job.log.tgz.1 /var/lib/boinc/var/slot224/slots/0/
[2026-03-14 07:41:14] 2026-03-14 06:40:21,962 | INFO     | adding to output.list: log.48955006._046517.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/df/log.48955006._046517.job.log.tg
[2026-03-14 07:41:14] 2026-03-14 06:40:21,963 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 07:41:14] 2026-03-14 06:40:21,963 | INFO     | summary of transferred files:
[2026-03-14 07:41:14] 2026-03-14 06:40:21,963 | INFO     |  -- lfn=log.48955006._046517.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 07:41:14] 2026-03-14 06:40:21,963 | INFO     | stage-out finished correctly
[2026-03-14 07:41:14] 2026-03-14 06:40:22,039 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 07:41:14] 2026-03-14 06:40:22,320 | INFO     | number of running child processes to parent process 2790270: 1
[2026-03-14 07:41:14] 2026-03-14 06:40:22,320 | INFO     | maximum number of monitored processes: 6
[2026-03-14 07:41:14] 2026-03-14 06:40:23,557 | INFO     | job 7043441415 has state=finished
[2026-03-14 07:41:14] 2026-03-14 06:40:23,557 | INFO     | preparing for final server update for job 7043441415 in state='finished'
[2026-03-14 07:41:14] 2026-03-14 06:40:23,558 | INFO     | reading metadata from: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7043441415/jobReport.json
[2026-03-14 07:41:14] 2026-03-14 06:40:23,559 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot224/slots/0/workernode_map.json
[2026-03-14 07:41:14] 2026-03-14 06:40:23,560 | INFO     | this job has now completed (state=finished)
[2026-03-14 07:41:14] 2026-03-14 06:40:23,560 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 07:41:14] 2026-03-14 06:40:23,560 | INFO     | log transfer has been attempted: DONE
[2026-03-14 07:41:14] 2026-03-14 06:40:23,560 | INFO     | job 7043441415 has finished - writing final server update
[2026-03-14 07:41:14] 2026-03-14 06:40:23,560 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2118595/.job.ad'
[2026-03-14 07:41:14] 2026-03-14 06:40:23,560 | INFO     | total number of processed events: 400 (read)
[2026-03-14 07:41:14] 2026-03-14 06:40:23,579 | INFO     | using path: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7043441415/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 07:41:14] 2026-03-14 06:40:23,579 | INFO     | extracted standard info from prmon json
[2026-03-14 07:41:14] 2026-03-14 06:40:23,579 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 07:41:14] 2026-03-14 06:40:23,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 07:41:14] 2026-03-14 06:40:23,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 07:41:14] 2026-03-14 06:40:23,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 07:41:14] 2026-03-14 06:40:23,581 | INFO     | fitting pss+swap vs Time
[2026-03-14 07:41:14] 2026-03-14 06:40:23,581 | INFO     | sum of square deviations: 106336877.5
[2026-03-14 07:41:14] 2026-03-14 06:40:23,581 | INFO     | sum of deviations: -2500404944.9999995
[2026-03-14 07:41:14] 2026-03-14 06:40:23,581 | INFO     | mean x: 1773468155.5
[2026-03-14 07:41:14] 2026-03-14 06:40:23,581 | INFO     | mean y: 2352154.0857142857
[2026-03-14 07:41:14] 2026-03-14 06:40:23,581 | INFO     | intersect: 41703675815.881485
[2026-03-14 07:41:14] 2026-03-14 06:40:23,581 | INFO     | chi2: 0.00265350430079453
[2026-03-14 07:41:14] 2026-03-14 06:40:23,582 | INFO     | current memory leak: -23.51 B/s (using 70 data points, chi2=0.00)
[2026-03-14 07:41:14] 2026-03-14 06:40:23,582 | INFO     | could have reported an average CPU frequency of 3528 MHz (6 samples)
[2026-03-14 07:41:14] 2026-03-14 06:40:23,582 | INFO     | ..............................
[2026-03-14 07:41:14] 2026-03-14 06:40:23,582 | INFO     | . Timing measurements:
[2026-03-14 07:41:14] 2026-03-14 06:40:23,582 | INFO     | . get job = 0 s
[2026-03-14 07:41:14] 2026-03-14 06:40:23,582 | INFO     | . initial setup = 7 s
[2026-03-14 07:41:14] 2026-03-14 06:40:23,582 | INFO     | . payload setup = 7 s
[2026-03-14 07:41:14] 2026-03-14 06:40:23,582 | INFO     | . stage-in = 0 s
[2026-03-14 07:41:14] 2026-03-14 06:40:23,582 | INFO     | . payload execution = 4677 s
[2026-03-14 07:41:14] 2026-03-14 06:40:23,582 | INFO     | . stage-out = 0 s
[2026-03-14 07:41:14] 2026-03-14 06:40:23,582 | INFO     | . log creation = 0 s
[2026-03-14 07:41:14] 2026-03-14 06:40:23,582 | INFO     | ..............................
[2026-03-14 07:41:14] 2026-03-14 06:40:23,636 | INFO     | 
[2026-03-14 07:41:14] 2026-03-14 06:40:23,636 | INFO     | job summary report
[2026-03-14 07:41:14] 2026-03-14 06:40:23,636 | INFO     | --------------------------------------------------
[2026-03-14 07:41:14] 2026-03-14 06:40:23,636 | INFO     | PanDA job id: 7043441415
[2026-03-14 07:41:14] 2026-03-14 06:40:23,636 | INFO     | task id: 48955006
[2026-03-14 07:41:14] 2026-03-14 06:40:23,636 | INFO     | errors: (none)
[2026-03-14 07:41:14] 2026-03-14 06:40:23,636 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 07:41:14] 2026-03-14 06:40:23,636 | INFO     | pilot state: finished 
[2026-03-14 07:41:14] 2026-03-14 06:40:23,636 | INFO     | transexitcode: 0
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | exeerrorcode: 0
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | exeerrordiag: 
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | exitcode: 0
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | exitmsg: OK
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | cpuconsumptiontime: 17610 s
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | nevents: 400
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | neventsw: 0
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | pid: 2790270
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | pgrp: 2790270
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | corecount: 4
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | event service: False
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | sizes: {0: 2280242, 11: 2280242, 4688: 2306557, 4689: 2306556, 4690: 2315690, 4691: 2315828}
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | --------------------------------------------------
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | 
[2026-03-14 07:41:14] 2026-03-14 06:40:23,637 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot224/slots/0
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,659 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 07:41:14] 2026-03-14 06:40:23,660 | INFO     | job 7043441415 has completed (purged errors)
[2026-03-14 07:41:14] 2026-03-14 06:40:23,660 | INFO     | overall cleanup function is called
[2026-03-14 07:41:14] 2026-03-14 06:40:24,667 | INFO     | --- collectZombieJob: --- 10, [2790270]
[2026-03-14 07:41:14] 2026-03-14 06:40:24,667 | INFO     | zombie collector waiting for pid 2790270
[2026-03-14 07:41:14] 2026-03-14 06:40:24,667 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 07:41:14] 2026-03-14 06:40:24,667 | INFO     | collected zombie processes
[2026-03-14 07:41:14] 2026-03-14 06:40:24,667 | INFO     | will attempt to kill all subprocesses of pid=2790270
[2026-03-14 07:41:14] 2026-03-14 06:40:25,407 | INFO     | process IDs to be killed: [2790270] (in reverse order)
[2026-03-14 07:41:14] 2026-03-14 06:40:25,677 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 07:41:14] 2026-03-14 06:40:25,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 07:41:14] 2026-03-14 06:40:25,708 | INFO     | did not find any defunct processes belonging to 2790270
[2026-03-14 07:41:14] 2026-03-14 06:40:25,738 | INFO     | did not find any defunct processes belonging to 2790270
[2026-03-14 07:41:14] 2026-03-14 06:40:25,738 | INFO     | ready for new job
[2026-03-14 07:41:14] 2026-03-14 06:40:25,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 07:41:14] 2026-03-14 06:40:25,739 | INFO     | **************************************
[2026-03-14 07:41:14] 2026-03-14 06:40:25,740 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 07:41:14] 2026-03-14 06:40:25,740 | INFO     | **************************************
[2026-03-14 07:41:14] 2026-03-14 06:40:25,740 | INFO     | 
[2026-03-14 07:41:14] 2026-03-14 06:40:25,746 | INFO     | architecture information:
[2026-03-14 07:41:14] 2026-03-14 06:40:25,747 | INFO     | executing command: cat /etc/os-release
[2026-03-14 07:41:14] 2026-03-14 06:40:25,770 | INFO     | cat /etc/os-release:
[2026-03-14 07:41:14] NAME="CentOS Linux"
[2026-03-14 07:41:14] VERSION="7 (Core)"
[2026-03-14 07:41:14] ID="centos"
[2026-03-14 07:41:14] ID_LIKE="rhel fedora"
[2026-03-14 07:41:14] VERSION_ID="7"
[2026-03-14 07:41:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 07:41:14] ANSI_COLOR="0;31"
[2026-03-14 07:41:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 07:41:14] HOME_URL="https://www.centos.org/"
[2026-03-14 07:41:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 07:41:14] 
[2026-03-14 07:41:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 07:41:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 07:41:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 07:41:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 07:41:14] 
[2026-03-14 07:41:14] 2026-03-14 06:40:25,770 | INFO     | **************************************
[2026-03-14 07:41:14] 2026-03-14 06:40:26,272 | INFO     | executing command: df -mP /var/lib/boinc/var/slot224/slots/0
[2026-03-14 07:41:14] 2026-03-14 06:40:26,290 | INFO     | sufficient remaining disk space (20165165056 B)
[2026-03-14 07:41:14] 2026-03-14 06:40:26,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 07:41:14] 2026-03-14 06:40:26,291 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 07:41:14] 2026-03-14 06:40:26,291 | INFO     | update_server=False
[2026-03-14 07:41:14] 2026-03-14 06:40:26,291 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 07:41:14] 2026-03-14 06:40:26,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 07:41:14] 2026-03-14 06:40:26,291 | INFO     | aborting loop
[2026-03-14 07:41:14] 2026-03-14 06:40:27,217 | INFO     | all payload control threads have been joined
[2026-03-14 07:41:14] 2026-03-14 06:40:27,296 | INFO     | [job] retrieve thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:27,296 | INFO     | [job] job monitor thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:27,371 | INFO     | all data control threads have been joined
[2026-03-14 07:41:14] 2026-03-14 06:40:27,458 | INFO     | all job control threads have been joined
[2026-03-14 07:41:14] 2026-03-14 06:40:27,521 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:27,546 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 07:41:14] 2026-03-14 06:40:27,610 | INFO     | [job] validate thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:27,667 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:27,843 | INFO     | [payload] failed_post thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:27,894 | INFO     | [data] copytool_in thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:28,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 07:41:14] 2026-03-14 06:40:28,222 | INFO     | [payload] control thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:28,376 | INFO     | [data] control thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:28,463 | INFO     | [job] control thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:28,481 | INFO     | [payload] validate_post thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:28,650 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 07:41:14] 2026-03-14 06:40:28,729 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:29,551 | INFO     | [data] copytool_out thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:29,655 | INFO     | [job] queue monitor thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:32,133 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:36,467 | INFO     | job.realtimelogging is not enabled
[2026-03-14 07:41:14] 2026-03-14 06:40:37,472 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 07:41:14] 2026-03-14 06:40:55,495 | INFO     | PID=2784224 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 07:41:14] 2026-03-14 06:40:55,495 | INFO     | .. there are 51 such processes running
[2026-03-14 07:41:14] 2026-03-14 06:40:55,496 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 07:41:14] 2026-03-14 06:40:55,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 07:41:14] 2026-03-14 06:40:55,496 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 07:41:14] 2026-03-14 06:41:08,425 | INFO     | [monitor] cgroup control has ended
[2026-03-14 07:41:14] 2026-03-14 06:41:09,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23310339192640)>', '<ExcThread(monitor, started 23310097454848)>']
[2026-03-14 07:41:14] 2026-03-14 06:41:09,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 07:41:14] 2026-03-14 06:41:09,566 | INFO     | [monitor] control thread has ended
[2026-03-14 07:41:14] 2026-03-14 06:41:14,295 | INFO     | all workflow threads have been joined
[2026-03-14 07:41:14] 2026-03-14 06:41:14,295 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 07:41:14] 2026-03-14 06:41:14,295 | INFO     | traces error code: 0
[2026-03-14 07:41:14] 2026-03-14 06:41:14,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 07:41:14] 2026-03-14 06:41:14,422 [wrapper] ==== pilot stdout END ====
[2026-03-14 07:41:14] 2026-03-14 06:41:14,431 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 07:41:14] 2026-03-14 06:41:14,440 [wrapper] pilotpid: 2784224
[2026-03-14 07:41:14] 2026-03-14 06:41:14,455 [wrapper] Pilot exit status: 0
[2026-03-14 07:41:14] 2026-03-14 06:41:14,490 [wrapper] pandaids: 7043441415
[2026-03-14 07:41:14] 2026-03-14 06:41:14,642 [wrapper] cleanup supervisor_pilot 3466203 2784225
[2026-03-14 07:41:14] 2026-03-14 06:41:14,648 [wrapper] Test setup, not cleaning
[2026-03-14 07:41:14] 2026-03-14 06:41:14,662 [wrapper] apfmon messages muted
[2026-03-14 07:41:14] 2026-03-14 06:41:14,666 [wrapper] ==== wrapper stdout END ====
[2026-03-14 07:41:14] 2026-03-14 06:41:14,691 [wrapper] ==== wrapper stderr END ====
[2026-03-14 07:41:14]  *** Error codes and diagnostics ***
[2026-03-14 07:41:14]     "exeErrorCode": 0,
[2026-03-14 07:41:14]     "exeErrorDiag": "",
[2026-03-14 07:41:14]     "pilotErrorCode": 0,
[2026-03-14 07:41:14]     "pilotErrorDiag": "",
[2026-03-14 07:41:14]  *** Listing of results directory ***
[2026-03-14 07:41:14] total 604320
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc    585013 Mar 12 19:04 pilot3.tar.gz
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc      5111 Mar 12 19:04 queuedata.json
[2026-03-14 07:41:14] -rwx------. 1 boinc boinc     36322 Mar 12 19:04 runpilot2-wrapper.sh
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc       100 Mar 14 06:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 07:41:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 06:21 run_atlas
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc       105 Mar 14 06:21 job.xml
[2026-03-14 07:41:14] -rw-r--r--. 2 boinc boinc 434805116 Mar 14 06:21 EVNT.46701403._000921.pool.root.1
[2026-03-14 07:41:14] -rw-r--r--. 2 boinc boinc     15845 Mar 14 06:21 start_atlas.sh
[2026-03-14 07:41:14] drwxrwx--x. 2 boinc boinc      4096 Mar 14 06:21 shared
[2026-03-14 07:41:14] -rw-r--r--. 2 boinc boinc    597526 Mar 14 06:21 input.tar.gz
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc      6709 Mar 14 06:21 init_data.xml
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc         0 Mar 14 06:21 boinc_lockfile
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc      2564 Mar 14 06:21 pandaJob.out
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc   1004571 Mar 14 06:21 agis_schedconf.cvmfs.json
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc   1511579 Mar 14 06:21 agis_ddmendpoints.agis.ALL.json
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc       442 Mar 14 06:21 workernode_map.json
[2026-03-14 07:41:14] drwx------. 5 boinc boinc      4096 Mar 14 06:22 pilot3
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc 178169607 Mar 14 07:39 HITS.48955006._046517.pool.root.1
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc       530 Mar 14 07:39 boinc_task_state.xml
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc      1030 Mar 14 07:40 memory_monitor_summary.json
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc        95 Mar 14 07:40 pilot_heartbeat.json
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc    267942 Mar 14 07:40 log.48955006._046517.job.log.tgz.1
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc      6357 Mar 14 07:40 heartbeat.json
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc      8192 Mar 14 07:40 boinc_mmap_file
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc        27 Mar 14 07:40 wrapper_checkpoint.txt
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc      4902 Mar 14 07:41 pilotlog.txt
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc    686842 Mar 14 07:41 log.48955006._046517.job.log.1
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc       357 Mar 14 07:41 output.list
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc       620 Mar 14 07:41 runtime_log
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc    972800 Mar 14 07:41 result.tar.gz
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc      9221 Mar 14 07:41 runtime_log.err
[2026-03-14 07:41:14] -rw-------. 1 boinc boinc       661 Mar 14 07:41 LKENDmsZzK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmpqkLDm8w6Ksn.diag
[2026-03-14 07:41:14] -rw-r--r--. 1 boinc boinc     21041 Mar 14 07:41 stderr.txt
[2026-03-14 07:41:15] HITS file was successfully produced:
[2026-03-14 07:41:15] -rw-------. 1 boinc boinc 178169607 Mar 14 07:39 shared/HITS.pool.root.1
[2026-03-14 07:41:15]  *** Contents of shared directory: ***
[2026-03-14 07:41:15] total 600172
[2026-03-14 07:41:15] -rw-r--r--. 2 boinc boinc 434805116 Mar 14 06:21 ATLAS.root_0
[2026-03-14 07:41:15] -rw-r--r--. 2 boinc boinc     15845 Mar 14 06:21 start_atlas.sh
[2026-03-14 07:41:15] -rw-r--r--. 2 boinc boinc    597526 Mar 14 06:21 input.tar.gz
[2026-03-14 07:41:15] -rw-------. 1 boinc boinc 178169607 Mar 14 07:39 HITS.pool.root.1
[2026-03-14 07:41:15] -rw-------. 1 boinc boinc    972800 Mar 14 07:41 result.tar.gz
07:41:16 (2773179): run_atlas exited; CPU time 17827.588702
07:41:16 (2773179): called boinc_finish(0)

</stderr_txt>
]]>

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