Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:45:13 (71425): wrapper (7.7.26015): starting
23:45:13 (71425): wrapper: running run_atlas (--nthreads 2)
[2026-03-13 23:45:13] Arguments: --nthreads 2
[2026-03-13 23:45:13] Threads: 2
[2026-03-13 23:45:13] Checking for CVMFS
[2026-03-13 23:45:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 23:45:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 23:45:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 23:45:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 23:45:15] 2.13.3.0 1801 1734 46680 157256 2 50 2916900 4096000 0 130560 0 217123 99.949 63290 73 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2026-03-13 23:45:15] CVMFS is ok
[2026-03-13 23:45:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 23:45:15] Checking for apptainer binary...
[2026-03-13 23:45:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 23:45:15] Running /usr/bin/apptainer --version
[2026-03-13 23:45:15] apptainer version 1.3.1
[2026-03-13 23:45:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 23:45:15] ahanllin04
[2026-03-13 23:45:15] apptainer works
[2026-03-13 23:45:15] Set ATHENA_PROC_NUMBER=2
[2026-03-13 23:45:15] Set ATHENA_CORE_NUMBER=2
[2026-03-13 23:45:15] Starting ATLAS job with PandaID=7039944891
[2026-03-13 23:45:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 03:21:09]  *** The last 200 lines of the pilot log: ***
[2026-03-14 03:21:09] 2026-03-14 02:20:30,733 | INFO     | time since job start (12888s) is within the limit (349056.0s)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,292 | INFO     | job 7039944891 has state=finished
[2026-03-14 03:21:09] 2026-03-14 02:20:31,292 | INFO     | preparing for final server update for job 7039944891 in state='finished'
[2026-03-14 03:21:09] 2026-03-14 02:20:31,292 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-7039944891/jobReport.json
[2026-03-14 03:21:09] 2026-03-14 02:20:31,296 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-03-14 03:21:09] 2026-03-14 02:20:31,297 | INFO     | this job has now completed (state=finished)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,297 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,297 | INFO     | log transfer has been attempted: DONE
[2026-03-14 03:21:09] 2026-03-14 02:20:31,297 | INFO     | job 7039944891 has finished - writing final server update
[2026-03-14 03:21:09] 2026-03-14 02:20:31,297 | INFO     | total number of processed events: 400 (read)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,299 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7039944891/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,300 | INFO     | extracted standard info from prmon json
[2026-03-14 03:21:09] 2026-03-14 02:20:31,300 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 03:21:09] 2026-03-14 02:20:31,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 03:21:09] 2026-03-14 02:20:31,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 03:21:09] 2026-03-14 02:20:31,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 03:21:09] 2026-03-14 02:20:31,303 | INFO     | fitting pss+swap vs Time
[2026-03-14 03:21:09] 2026-03-14 02:20:31,304 | INFO     | sum of square deviations: 2912836010.0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,304 | INFO     | sum of deviations: -23096139274.000004
[2026-03-14 03:21:09] 2026-03-14 02:20:31,304 | INFO     | mean x: 1773448373.0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,304 | INFO     | mean y: 2281230.1184834125
[2026-03-14 03:21:09] 2026-03-14 02:20:31,305 | INFO     | intersect: 14064113230.766094
[2026-03-14 03:21:09] 2026-03-14 02:20:31,305 | INFO     | chi2: 1.5981098923441288
[2026-03-14 03:21:09] 2026-03-14 02:20:31,305 | INFO     | sum of square deviations: 2710627567.5
[2026-03-14 03:21:09] 2026-03-14 02:20:31,306 | INFO     | sum of deviations: -22438945892.000004
[2026-03-14 03:21:09] 2026-03-14 02:20:31,306 | INFO     | mean x: 1773448220.5
[2026-03-14 03:21:09] 2026-03-14 02:20:31,306 | INFO     | mean y: 2281725.8155339807
[2026-03-14 03:21:09] 2026-03-14 02:20:31,306 | INFO     | intersect: 14683128751.497232
[2026-03-14 03:21:09] 2026-03-14 02:20:31,306 | INFO     | chi2: 1.5953261943040034
[2026-03-14 03:21:09] 2026-03-14 02:20:31,306 | INFO     | current chi2=1.5953261943040034 (change=0.17418689750066527 %)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,306 | INFO     | right removable region: 205
[2026-03-14 03:21:09] 2026-03-14 02:20:31,306 | INFO     | sum of square deviations: 2710627567.5
[2026-03-14 03:21:09] 2026-03-14 02:20:31,307 | INFO     | sum of deviations: -39522741739.0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,307 | INFO     | mean x: 1773448525.5
[2026-03-14 03:21:09] 2026-03-14 02:20:31,307 | INFO     | mean y: 2293322.0970873786
[2026-03-14 03:21:09] 2026-03-14 02:20:31,307 | INFO     | intersect: 25860345125.721287
[2026-03-14 03:21:09] 2026-03-14 02:20:31,307 | INFO     | chi2: 0.35743584924355126
[2026-03-14 03:21:09] 2026-03-14 02:20:31,307 | INFO     | current chi2=0.35743584924355126 (change=77.63383788837828 %)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,307 | INFO     | sum of square deviations: 2518000700.0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,308 | INFO     | sum of deviations: -28110670931.0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,308 | INFO     | mean x: 1773448678.0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,308 | INFO     | mean y: 2284284.7562189056
[2026-03-14 03:21:09] 2026-03-14 02:20:31,308 | INFO     | intersect: 19800861862.703266
[2026-03-14 03:21:09] 2026-03-14 02:20:31,308 | INFO     | chi2: 0.2884447368756324
[2026-03-14 03:21:09] 2026-03-14 02:20:31,309 | INFO     | current chi2=0.2884447368756324 (change=19.301676794290827 %)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,309 | INFO     | left removable region: 20
[2026-03-14 03:21:09] 2026-03-14 02:20:31,309 | INFO     | sum of square deviations: 1963274020.0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,309 | INFO     | sum of deviations: -4512799276.0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,309 | INFO     | mean x: 1773448800.0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,309 | INFO     | mean y: 2264337.8162162164
[2026-03-14 03:21:09] 2026-03-14 02:20:31,309 | INFO     | intersect: 4078729660.096123
[2026-03-14 03:21:09] 2026-03-14 02:20:31,310 | INFO     | chi2: 0.0652827773801353
[2026-03-14 03:21:09] 2026-03-14 02:20:31,310 | INFO     | current memory leak: -2.30 B/s (using 185 data points, chi2=0.07)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,310 | INFO     | could have reported an average CPU frequency of 2099 MHz (11 samples)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,310 | INFO     | ..............................
[2026-03-14 03:21:09] 2026-03-14 02:20:31,310 | INFO     | . Timing measurements:
[2026-03-14 03:21:09] 2026-03-14 02:20:31,310 | INFO     | . get job = 0 s
[2026-03-14 03:21:09] 2026-03-14 02:20:31,310 | INFO     | . initial setup = 7 s
[2026-03-14 03:21:09] 2026-03-14 02:20:31,310 | INFO     | . payload setup = 9 s
[2026-03-14 03:21:09] 2026-03-14 02:20:31,310 | INFO     | . stage-in = 0 s
[2026-03-14 03:21:09] 2026-03-14 02:20:31,310 | INFO     | . payload execution = 12858 s
[2026-03-14 03:21:09] 2026-03-14 02:20:31,310 | INFO     | . stage-out = 0 s
[2026-03-14 03:21:09] 2026-03-14 02:20:31,310 | INFO     | . log creation = 0 s
[2026-03-14 03:21:09] 2026-03-14 02:20:31,311 | INFO     | ..............................
[2026-03-14 03:21:09] 2026-03-14 02:20:31,366 | INFO     | 
[2026-03-14 03:21:09] 2026-03-14 02:20:31,366 | INFO     | job summary report
[2026-03-14 03:21:09] 2026-03-14 02:20:31,366 | INFO     | --------------------------------------------------
[2026-03-14 03:21:09] 2026-03-14 02:20:31,367 | INFO     | PanDA job id: 7039944891
[2026-03-14 03:21:09] 2026-03-14 02:20:31,367 | INFO     | task id: 48700930
[2026-03-14 03:21:09] 2026-03-14 02:20:31,367 | INFO     | errors: (none)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,367 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 03:21:09] 2026-03-14 02:20:31,367 | INFO     | pilot state: finished 
[2026-03-14 03:21:09] 2026-03-14 02:20:31,367 | INFO     | transexitcode: 0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,367 | INFO     | exeerrorcode: 0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,367 | INFO     | exeerrordiag: 
[2026-03-14 03:21:09] 2026-03-14 02:20:31,367 | INFO     | exitcode: 0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,367 | INFO     | exitmsg: OK
[2026-03-14 03:21:09] 2026-03-14 02:20:31,367 | INFO     | cpuconsumptiontime: 25172 s
[2026-03-14 03:21:09] 2026-03-14 02:20:31,367 | INFO     | nevents: 400
[2026-03-14 03:21:09] 2026-03-14 02:20:31,368 | INFO     | neventsw: 0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,368 | INFO     | pid: 79804
[2026-03-14 03:21:09] 2026-03-14 02:20:31,368 | INFO     | pgrp: 79804
[2026-03-14 03:21:09] 2026-03-14 02:20:31,368 | INFO     | corecount: 2
[2026-03-14 03:21:09] 2026-03-14 02:20:31,368 | INFO     | event service: False
[2026-03-14 03:21:09] 2026-03-14 02:20:31,368 | INFO     | sizes: {0: 2280183, 11: 2280183, 12870: 2310324, 12871: 2310323, 12873: 2319391, 12875: 2319447, 12877: 2319769}
[2026-03-14 03:21:09] 2026-03-14 02:20:31,368 | INFO     | --------------------------------------------------
[2026-03-14 03:21:09] 2026-03-14 02:20:31,368 | INFO     | 
[2026-03-14 03:21:09] 2026-03-14 02:20:31,368 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-14 03:21:09] 2026-03-14 02:20:31,397 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,398 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,398 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,398 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,399 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,399 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,399 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,400 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,400 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 03:21:09] 2026-03-14 02:20:31,400 | INFO     | job 7039944891 has completed (purged errors)
[2026-03-14 03:21:09] 2026-03-14 02:20:31,400 | INFO     | overall cleanup function is called
[2026-03-14 03:21:09] 2026-03-14 02:20:32,410 | INFO     | --- collectZombieJob: --- 10, [79804]
[2026-03-14 03:21:09] 2026-03-14 02:20:32,410 | INFO     | zombie collector waiting for pid 79804
[2026-03-14 03:21:09] 2026-03-14 02:20:32,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 03:21:09] 2026-03-14 02:20:32,411 | INFO     | collected zombie processes
[2026-03-14 03:21:09] 2026-03-14 02:20:32,411 | INFO     | will attempt to kill all subprocesses of pid=79804
[2026-03-14 03:21:09] 2026-03-14 02:20:32,440 | INFO     | process IDs to be killed: [79804] (in reverse order)
[2026-03-14 03:21:09] 2026-03-14 02:20:32,484 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 03:21:09] 2026-03-14 02:20:32,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 03:21:09] 2026-03-14 02:20:32,485 | INFO     | did not find any defunct processes belonging to 79804
[2026-03-14 03:21:09] 2026-03-14 02:20:32,486 | INFO     | did not find any defunct processes belonging to 79804
[2026-03-14 03:21:09] 2026-03-14 02:20:32,486 | INFO     | ready for new job
[2026-03-14 03:21:09] 2026-03-14 02:20:32,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 03:21:09] 2026-03-14 02:20:32,487 | INFO     | **************************************
[2026-03-14 03:21:09] 2026-03-14 02:20:32,487 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 03:21:09] 2026-03-14 02:20:32,488 | INFO     | **************************************
[2026-03-14 03:21:09] 2026-03-14 02:20:32,488 | INFO     | 
[2026-03-14 03:21:09] 2026-03-14 02:20:32,488 | INFO     | pilot is running in a VM
[2026-03-14 03:21:09] 2026-03-14 02:20:32,488 | INFO     | architecture information:
[2026-03-14 03:21:09] 2026-03-14 02:20:32,488 | INFO     | executing command: cat /etc/os-release
[2026-03-14 03:21:09] 2026-03-14 02:20:32,506 | INFO     | cat /etc/os-release:
[2026-03-14 03:21:09] NAME="CentOS Linux"
[2026-03-14 03:21:09] VERSION="7 (Core)"
[2026-03-14 03:21:09] ID="centos"
[2026-03-14 03:21:09] ID_LIKE="rhel fedora"
[2026-03-14 03:21:09] VERSION_ID="7"
[2026-03-14 03:21:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 03:21:09] ANSI_COLOR="0;31"
[2026-03-14 03:21:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 03:21:09] HOME_URL="https://www.centos.org/"
[2026-03-14 03:21:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 03:21:09] 
[2026-03-14 03:21:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 03:21:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 03:21:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 03:21:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 03:21:09] 
[2026-03-14 03:21:09] 2026-03-14 02:20:32,507 | INFO     | **************************************
[2026-03-14 03:21:09] 2026-03-14 02:20:33,011 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-14 03:21:09] 2026-03-14 02:20:33,036 | INFO     | sufficient remaining disk space (19545456640 B)
[2026-03-14 03:21:09] 2026-03-14 02:20:33,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 03:21:09] 2026-03-14 02:20:33,036 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 03:21:09] 2026-03-14 02:20:33,036 | INFO     | update_server=False
[2026-03-14 03:21:09] 2026-03-14 02:20:33,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 03:21:09] 2026-03-14 02:20:33,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 03:21:09] 2026-03-14 02:20:33,037 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 03:21:09] 2026-03-14 02:20:33,305 | INFO     | all data control threads have been joined
[2026-03-14 03:21:09] 2026-03-14 02:20:33,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 03:21:09] 2026-03-14 02:20:33,554 | INFO     | aborting loop
[2026-03-14 03:21:09] 2026-03-14 02:20:33,641 | INFO     | all job control threads have been joined
[2026-03-14 03:21:09] 2026-03-14 02:20:33,817 | INFO     | all payload control threads have been joined
[2026-03-14 03:21:09] 2026-03-14 02:20:34,043 | INFO     | [job] retrieve thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:34,044 | INFO     | [job] queue monitor thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:34,135 | INFO     | [payload] validate_post thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:34,312 | INFO     | [data] control thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:34,407 | INFO     | [job] validate thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:34,549 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:34,559 | INFO     | [job] job monitor thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:34,647 | INFO     | [job] control thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:34,665 | INFO     | [payload] failed_post thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:34,823 | INFO     | [payload] control thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:34,905 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:34,909 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:35,039 | INFO     | [data] copytool_out thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:35,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 03:21:09] 2026-03-14 02:20:35,244 | INFO     | [data] copytool_in thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:39,115 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:20:43,156 | INFO     | job.realtimelogging is not enabled
[2026-03-14 03:21:09] 2026-03-14 02:20:44,162 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 03:21:09] 2026-03-14 02:21:03,338 | INFO     | [monitor] cgroup control has ended
[2026-03-14 03:21:09] 2026-03-14 02:21:03,808 | INFO     | PID=75444 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 03:21:09] 2026-03-14 02:21:03,808 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 03:21:09] 2026-03-14 02:21:03,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 03:21:09] 2026-03-14 02:21:03,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 03:21:09] 2026-03-14 02:21:04,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139527669110592)>', '<ExcThread(monitor, started 139526869591808)>']
[2026-03-14 03:21:09] 2026-03-14 02:21:04,814 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 03:21:09] 2026-03-14 02:21:04,815 | INFO     | [monitor] control thread has ended
[2026-03-14 03:21:09] 2026-03-14 02:21:09,217 | INFO     | all workflow threads have been joined
[2026-03-14 03:21:09] 2026-03-14 02:21:09,218 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 03:21:09] 2026-03-14 02:21:09,218 | INFO     | traces error code: 0
[2026-03-14 03:21:09] 2026-03-14 02:21:09,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 03:21:09] 2026-03-14 02:21:09,354 [wrapper] ==== pilot stdout END ====
[2026-03-14 03:21:09] 2026-03-14 02:21:09,357 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 03:21:09] 2026-03-14 02:21:09,361 [wrapper] pilotpid: 75444
[2026-03-14 03:21:09] 2026-03-14 02:21:09,365 [wrapper] Pilot exit status: 0
[2026-03-14 03:21:09] 2026-03-14 02:21:09,383 [wrapper] pandaids: 7039944891
[2026-03-14 03:21:09] 2026-03-14 02:21:09,413 [wrapper] cleanup supervisor_pilot   84850 75445
[2026-03-14 03:21:09] 2026-03-14 02:21:09,417 [wrapper] Test setup, not cleaning
[2026-03-14 03:21:09] 2026-03-14 02:21:09,421 [wrapper] apfmon messages muted
[2026-03-14 03:21:09] 2026-03-14 02:21:09,425 [wrapper] ==== wrapper stdout END ====
[2026-03-14 03:21:09] 2026-03-14 02:21:09,428 [wrapper] ==== wrapper stderr END ====
[2026-03-14 03:21:09]  *** Error codes and diagnostics ***
[2026-03-14 03:21:09]     "exeErrorCode": 0,
[2026-03-14 03:21:09]     "exeErrorDiag": "",
[2026-03-14 03:21:09]     "pilotErrorCode": 0,
[2026-03-14 03:21:09]     "pilotErrorDiag": "",
[2026-03-14 03:21:09]  *** Listing of results directory ***
[2026-03-14 03:21:09] total 342048
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc      5111 Mar  4 13:56 queuedata.json
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc    584627 Mar  4 13:56 pilot3.tar.gz
[2026-03-14 03:21:09] -rwx------ 1 boinc boinc     36322 Mar  4 13:57 runpilot2-wrapper.sh
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc       100 Mar 13 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 03:21:09] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 23:45 run_atlas
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc       105 Mar 13 23:45 job.xml
[2026-03-14 03:21:09] -rw-r--r-- 2 boinc boinc 188754448 Mar 13 23:45 EVNT.48700928._000105.pool.root.1
[2026-03-14 03:21:09] -rw-r--r-- 2 boinc boinc     15845 Mar 13 23:45 start_atlas.sh
[2026-03-14 03:21:09] drwxrwx--x 2 boinc boinc      4096 Mar 13 23:45 shared
[2026-03-14 03:21:09] -rw-r--r-- 2 boinc boinc    597950 Mar 13 23:45 input.tar.gz
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc      6482 Mar 13 23:45 init_data.xml
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc         0 Mar 13 23:45 boinc_setup_complete
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc         0 Mar 13 23:45 boinc_lockfile
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc      2519 Mar 13 23:45 pandaJob.out
[2026-03-14 03:21:09] -rw------- 1 boinc boinc        51 Mar 13 23:45 setup.sh.local
[2026-03-14 03:21:09] -rw------- 1 boinc boinc   1006717 Mar 13 23:45 agis_schedconf.cvmfs.json
[2026-03-14 03:21:09] -rw------- 1 boinc boinc       422 Mar 13 23:45 workernode_map.json
[2026-03-14 03:21:09] drwx------ 5 boinc boinc      4096 Mar 13 23:45 pilot3
[2026-03-14 03:21:09] -rw------- 1 boinc boinc 153238442 Mar 14 03:19 HITS.48700930._002685.pool.root.1
[2026-03-14 03:21:09] -rw------- 1 boinc boinc        95 Mar 14 03:20 pilot_heartbeat.json
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc       530 Mar 14 03:20 boinc_task_state.xml
[2026-03-14 03:21:09] -rw------- 1 boinc boinc      1035 Mar 14 03:20 memory_monitor_summary.json
[2026-03-14 03:21:09] -rw------- 1 boinc boinc   1511579 Mar 14 03:20 agis_ddmendpoints.agis.ALL.json
[2026-03-14 03:21:09] -rw------- 1 boinc boinc    339645 Mar 14 03:20 log.48700930._002685.job.log.tgz.1
[2026-03-14 03:21:09] -rw------- 1 boinc boinc      6354 Mar 14 03:20 heartbeat.json
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc        28 Mar 14 03:20 wrapper_checkpoint.txt
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc      8192 Mar 14 03:20 boinc_mmap_file
[2026-03-14 03:21:09] -rw------- 1 boinc boinc      4883 Mar 14 03:21 pilotlog.txt
[2026-03-14 03:21:09] -rw------- 1 boinc boinc   1821258 Mar 14 03:21 log.48700930._002685.job.log.1
[2026-03-14 03:21:09] -rw------- 1 boinc boinc       357 Mar 14 03:21 output.list
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc       620 Mar 14 03:21 runtime_log
[2026-03-14 03:21:09] -rw------- 1 boinc boinc   2181120 Mar 14 03:21 result.tar.gz
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc      9419 Mar 14 03:21 runtime_log.err
[2026-03-14 03:21:09] -rw------- 1 boinc boinc       657 Mar 14 03:21 Gv5MDm9x0H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmkSILDmz9Fkjm.diag
[2026-03-14 03:21:09] -rw-r--r-- 1 boinc boinc     20917 Mar 14 03:21 stderr.txt
[2026-03-14 03:21:09] HITS file was successfully produced:
[2026-03-14 03:21:09] -rw------- 1 boinc boinc 153238442 Mar 14 03:19 shared/HITS.pool.root.1
[2026-03-14 03:21:09]  *** Contents of shared directory: ***
[2026-03-14 03:21:09] total 336720
[2026-03-14 03:21:09] -rw-r--r-- 2 boinc boinc 188754448 Mar 13 23:45 ATLAS.root_0
[2026-03-14 03:21:09] -rw-r--r-- 2 boinc boinc     15845 Mar 13 23:45 start_atlas.sh
[2026-03-14 03:21:09] -rw-r--r-- 2 boinc boinc    597950 Mar 13 23:45 input.tar.gz
[2026-03-14 03:21:09] -rw------- 1 boinc boinc 153238442 Mar 14 03:19 HITS.pool.root.1
[2026-03-14 03:21:09] -rw------- 1 boinc boinc   2181120 Mar 14 03:21 result.tar.gz
03:21:10 (71425): run_atlas exited; CPU time 25195.929556
03:21:10 (71425): called boinc_finish(0)

</stderr_txt>
]]>

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