Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:48:10 (9098): wrapper (7.7.26015): starting
11:48:10 (9098): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 11:48:10] Arguments: --nthreads 8
[2026-03-13 11:48:10] Threads: 8
[2026-03-13 11:48:10] Checking for CVMFS
[2026-03-13 11:48:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 11:48:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 11:48:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 11:48:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 11:48:14] 2.11.2.0 32220 126036 134880 157236 1 55 19515672 25165825 899 130560 150 35402280 99.855 19835278 753 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 11:48:14] CVMFS is ok
[2026-03-13 11:48:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 11:48:14] Checking for apptainer binary...
[2026-03-13 11:48:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 11:48:14] Running /usr/bin/apptainer --version
[2026-03-13 11:48:14] apptainer version 1.3.2-1.el7
[2026-03-13 11:48:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 11:48:25] cg-vwn447.simple-grid.lan
[2026-03-13 11:48:25] apptainer works
[2026-03-13 11:48:25] Set ATHENA_PROC_NUMBER=8
[2026-03-13 11:48:25] Set ATHENA_CORE_NUMBER=8
[2026-03-13 11:48:25] Starting ATLAS job with PandaID=7043354430
[2026-03-13 11:48:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 15:49:18]  *** The last 200 lines of the pilot log: ***
[2026-03-13 15:49:18] 2026-03-13 14:48:17,591 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7043354430/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 15:49:18] 2026-03-13 14:48:17,591 | INFO     | extracted standard info from prmon json
[2026-03-13 15:49:18] 2026-03-13 14:48:17,592 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 15:49:18] 2026-03-13 14:48:17,592 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 15:49:18] 2026-03-13 14:48:17,592 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 15:49:18] 2026-03-13 14:48:17,592 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 15:49:18] 2026-03-13 14:48:17,597 | INFO     | fitting pss+swap vs Time
[2026-03-13 15:49:18] 2026-03-13 14:48:17,597 | INFO     | sum of square deviations: 3531973200.0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,599 | INFO     | sum of deviations: 139636961598.00003
[2026-03-13 15:49:18] 2026-03-13 14:48:17,600 | INFO     | mean x: 1773406395.0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,600 | INFO     | mean y: 2378799.9377777777
[2026-03-13 15:49:18] 2026-03-13 14:48:17,600 | INFO     | intersect: -70109444437.07394
[2026-03-13 15:49:18] 2026-03-13 14:48:17,600 | INFO     | chi2: 8.438292970634393
[2026-03-13 15:49:18] 2026-03-13 14:48:17,601 | INFO     | sum of square deviations: 3301699115.0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,603 | INFO     | sum of deviations: 150907131979.50003
[2026-03-13 15:49:18] 2026-03-13 14:48:17,603 | INFO     | mean x: 1773406242.5
[2026-03-13 15:49:18] 2026-03-13 14:48:17,603 | INFO     | mean y: 2386086.231818182
[2026-03-13 15:49:18] 2026-03-13 14:48:17,603 | INFO     | intersect: -81052743581.51707
[2026-03-13 15:49:18] 2026-03-13 14:48:17,603 | INFO     | chi2: 7.728738851160835
[2026-03-13 15:49:18] 2026-03-13 14:48:17,604 | INFO     | current chi2=7.728738851160835 (change=8.408740037147744 %)
[2026-03-13 15:49:18] 2026-03-13 14:48:17,604 | INFO     | right removable region: 219
[2026-03-13 15:49:18] 2026-03-13 14:48:17,604 | INFO     | sum of square deviations: 3301699115.0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,610 | INFO     | sum of deviations: 64447468131.00004
[2026-03-13 15:49:18] 2026-03-13 14:48:17,610 | INFO     | mean x: 1773406547.5
[2026-03-13 15:49:18] 2026-03-13 14:48:17,611 | INFO     | mean y: 2428553.7
[2026-03-13 15:49:18] 2026-03-13 14:48:17,611 | INFO     | intersect: -34613554905.868835
[2026-03-13 15:49:18] 2026-03-13 14:48:17,611 | INFO     | chi2: 3.598114266071228
[2026-03-13 15:49:18] 2026-03-13 14:48:17,611 | INFO     | current chi2=3.598114266071228 (change=57.359690181499815 %)
[2026-03-13 15:49:18] 2026-03-13 14:48:17,612 | INFO     | sum of square deviations: 3081657780.0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,614 | INFO     | sum of deviations: 5771552087.999998
[2026-03-13 15:49:18] 2026-03-13 14:48:17,614 | INFO     | mean x: 1773406700.0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,614 | INFO     | mean y: 2469164.9162790696
[2026-03-13 15:49:18] 2026-03-13 14:48:17,614 | INFO     | intersect: -3318895461.839319
[2026-03-13 15:49:18] 2026-03-13 14:48:17,614 | INFO     | chi2: 0.8929671948343004
[2026-03-13 15:49:18] 2026-03-13 14:48:17,614 | INFO     | current chi2=0.8929671948343004 (change=75.18235584526533 %)
[2026-03-13 15:49:18] 2026-03-13 14:48:17,615 | INFO     | sum of square deviations: 2871616632.5
[2026-03-13 15:49:18] 2026-03-13 14:48:17,617 | INFO     | sum of deviations: -4247183163.500002
[2026-03-13 15:49:18] 2026-03-13 14:48:17,617 | INFO     | mean x: 1773406852.5
[2026-03-13 15:49:18] 2026-03-13 14:48:17,617 | INFO     | mean y: 2476389.461904762
[2026-03-13 15:49:18] 2026-03-13 14:48:17,617 | INFO     | intersect: 2625383514.57361
[2026-03-13 15:49:18] 2026-03-13 14:48:17,617 | INFO     | chi2: 0.7995181077936131
[2026-03-13 15:49:18] 2026-03-13 14:48:17,617 | INFO     | current chi2=0.7995181077936131 (change=10.465007850375489 %)
[2026-03-13 15:49:18] 2026-03-13 14:48:17,618 | INFO     | left removable region: 30
[2026-03-13 15:49:18] 2026-03-13 14:48:17,618 | INFO     | sum of square deviations: 2093397390.0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,619 | INFO     | sum of deviations: 4817756393.0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,619 | INFO     | mean x: 1773407127.0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,620 | INFO     | mean y: 2490282.1693121693
[2026-03-13 15:49:18] 2026-03-13 14:48:17,620 | INFO     | intersect: -4078838740.3609076
[2026-03-13 15:49:18] 2026-03-13 14:48:17,620 | INFO     | chi2: 0.00025338565254439315
[2026-03-13 15:49:18] 2026-03-13 14:48:17,620 | INFO     | current memory leak: 2.30 B/s (using 189 data points, chi2=0.00)
[2026-03-13 15:49:18] 2026-03-13 14:48:17,621 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-13 15:49:18] 2026-03-13 14:48:17,621 | INFO     | ..............................
[2026-03-13 15:49:18] 2026-03-13 14:48:17,621 | INFO     | . Timing measurements:
[2026-03-13 15:49:18] 2026-03-13 14:48:17,621 | INFO     | . get job = 0 s
[2026-03-13 15:49:18] 2026-03-13 14:48:17,621 | INFO     | . initial setup = 117 s
[2026-03-13 15:49:18] 2026-03-13 14:48:17,621 | INFO     | . payload setup = 147 s
[2026-03-13 15:49:18] 2026-03-13 14:48:17,622 | INFO     | . stage-in = 0 s
[2026-03-13 15:49:18] 2026-03-13 14:48:17,622 | INFO     | . payload execution = 13848 s
[2026-03-13 15:49:18] 2026-03-13 14:48:17,622 | INFO     | . stage-out = 3 s
[2026-03-13 15:49:18] 2026-03-13 14:48:17,622 | INFO     | . log creation = 1 s
[2026-03-13 15:49:18] 2026-03-13 14:48:17,622 | INFO     | ..............................
[2026-03-13 15:49:18] 2026-03-13 14:48:17,793 | INFO     | 
[2026-03-13 15:49:18] 2026-03-13 14:48:17,794 | INFO     | job summary report
[2026-03-13 15:49:18] 2026-03-13 14:48:17,794 | INFO     | --------------------------------------------------
[2026-03-13 15:49:18] 2026-03-13 14:48:17,794 | INFO     | PanDA job id: 7043354430
[2026-03-13 15:49:18] 2026-03-13 14:48:17,794 | INFO     | task id: 48955015
[2026-03-13 15:49:18] 2026-03-13 14:48:17,794 | INFO     | errors: (none)
[2026-03-13 15:49:18] 2026-03-13 14:48:17,794 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 15:49:18] 2026-03-13 14:48:17,794 | INFO     | pilot state: finished 
[2026-03-13 15:49:18] 2026-03-13 14:48:17,794 | INFO     | transexitcode: 0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,795 | INFO     | exeerrorcode: 0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,795 | INFO     | exeerrordiag: 
[2026-03-13 15:49:18] 2026-03-13 14:48:17,795 | INFO     | exitcode: 0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,795 | INFO     | exitmsg: OK
[2026-03-13 15:49:18] 2026-03-13 14:48:17,795 | INFO     | cpuconsumptiontime: 51627 s
[2026-03-13 15:49:18] 2026-03-13 14:48:17,795 | INFO     | nevents: 400
[2026-03-13 15:49:18] 2026-03-13 14:48:17,795 | INFO     | neventsw: 0
[2026-03-13 15:49:18] 2026-03-13 14:48:17,795 | INFO     | pid: 17498
[2026-03-13 15:49:18] 2026-03-13 14:48:17,795 | INFO     | pgrp: 17498
[2026-03-13 15:49:18] 2026-03-13 14:48:17,796 | INFO     | corecount: 8
[2026-03-13 15:49:18] 2026-03-13 14:48:17,796 | INFO     | event service: False
[2026-03-13 15:49:18] 2026-03-13 14:48:17,796 | INFO     | sizes: {0: 2279146, 1: 2280204, 2: 2280292, 14000: 2310636, 14005: 2319634, 14007: 2319690, 14011: 2320012}
[2026-03-13 15:49:18] 2026-03-13 14:48:17,796 | INFO     | --------------------------------------------------
[2026-03-13 15:49:18] 2026-03-13 14:48:17,796 | INFO     | 
[2026-03-13 15:49:18] 2026-03-13 14:48:17,796 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-13 15:49:18] 2026-03-13 14:48:18,081 | INFO     | time since job start (14014s) is within the limit (345600.0s)
[2026-03-13 15:49:18] 2026-03-13 14:48:18,346 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,346 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,346 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,346 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,347 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,347 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,348 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,348 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,348 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,348 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,348 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 15:49:18] 2026-03-13 14:48:18,348 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,348 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 15:49:18] 2026-03-13 14:48:18,348 | INFO     | job 7043354430 has completed (purged errors)
[2026-03-13 15:49:18] 2026-03-13 14:48:18,349 | INFO     | overall cleanup function is called
[2026-03-13 15:49:18] 2026-03-13 14:48:19,185 | INFO     | PID=13072 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 15:49:18] 2026-03-13 14:48:19,185 | INFO     | .. there are 2 such processes running
[2026-03-13 15:49:18] 2026-03-13 14:48:19,357 | INFO     | --- collectZombieJob: --- 10, [17498]
[2026-03-13 15:49:18] 2026-03-13 14:48:19,358 | INFO     | zombie collector waiting for pid 17498
[2026-03-13 15:49:18] 2026-03-13 14:48:19,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 15:49:18] 2026-03-13 14:48:19,358 | INFO     | collected zombie processes
[2026-03-13 15:49:18] 2026-03-13 14:48:19,358 | INFO     | will attempt to kill all subprocesses of pid=17498
[2026-03-13 15:49:18] 2026-03-13 14:48:19,437 | INFO     | process IDs to be killed: [17498] (in reverse order)
[2026-03-13 15:49:18] 2026-03-13 14:48:20,356 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 15:49:18] 2026-03-13 14:48:20,356 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 15:49:18] 2026-03-13 14:48:20,359 | INFO     | did not find any defunct processes belonging to 17498
[2026-03-13 15:49:18] 2026-03-13 14:48:20,367 | INFO     | did not find any defunct processes belonging to 17498
[2026-03-13 15:49:18] 2026-03-13 14:48:20,367 | INFO     | ready for new job
[2026-03-13 15:49:18] 2026-03-13 14:48:20,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 15:49:18] 2026-03-13 14:48:20,369 | INFO     | **************************************
[2026-03-13 15:49:18] 2026-03-13 14:48:20,369 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 15:49:18] 2026-03-13 14:48:20,369 | INFO     | **************************************
[2026-03-13 15:49:18] 2026-03-13 14:48:20,370 | INFO     | 
[2026-03-13 15:49:18] 2026-03-13 14:48:20,370 | INFO     | pilot is running in a VM
[2026-03-13 15:49:18] 2026-03-13 14:48:20,370 | INFO     | architecture information:
[2026-03-13 15:49:18] 2026-03-13 14:48:20,381 | INFO     | executing command: cat /etc/os-release
[2026-03-13 15:49:18] 2026-03-13 14:48:20,686 | INFO     | cat /etc/os-release:
[2026-03-13 15:49:18] NAME="CentOS Linux"
[2026-03-13 15:49:18] VERSION="7 (Core)"
[2026-03-13 15:49:18] ID="centos"
[2026-03-13 15:49:18] ID_LIKE="rhel fedora"
[2026-03-13 15:49:18] VERSION_ID="7"
[2026-03-13 15:49:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 15:49:18] ANSI_COLOR="0;31"
[2026-03-13 15:49:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 15:49:18] HOME_URL="https://www.centos.org/"
[2026-03-13 15:49:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 15:49:18] 
[2026-03-13 15:49:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 15:49:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 15:49:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 15:49:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 15:49:18] 
[2026-03-13 15:49:18] 2026-03-13 14:48:20,686 | INFO     | **************************************
[2026-03-13 15:49:18] 2026-03-13 14:48:21,190 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-13 15:49:18] 2026-03-13 14:48:21,429 | INFO     | sufficient remaining disk space (496531144704 B)
[2026-03-13 15:49:18] 2026-03-13 14:48:21,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 15:49:18] 2026-03-13 14:48:21,430 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 15:49:18] 2026-03-13 14:48:21,430 | INFO     | update_server=False
[2026-03-13 15:49:18] 2026-03-13 14:48:21,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 15:49:18] 2026-03-13 14:48:21,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 15:49:18] 2026-03-13 14:48:21,489 | INFO     | all data control threads have been joined
[2026-03-13 15:49:18] 2026-03-13 14:48:21,710 | INFO     | all payload control threads have been joined
[2026-03-13 15:49:18] 2026-03-13 14:48:21,868 | INFO     | all job control threads have been joined
[2026-03-13 15:49:18] 2026-03-13 14:48:21,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 15:49:18] 2026-03-13 14:48:21,989 | INFO     | aborting loop
[2026-03-13 15:49:18] 2026-03-13 14:48:22,436 | INFO     | [job] retrieve thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:22,496 | INFO     | [data] control thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:22,644 | INFO     | [payload] validate_post thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:22,716 | INFO     | [payload] control thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:22,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 15:49:18] 2026-03-13 14:48:22,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 15:49:18] 2026-03-13 14:48:22,867 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:22,875 | INFO     | [job] control thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:22,994 | INFO     | [job] job monitor thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:23,097 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:23,106 | INFO     | [job] validate thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:23,289 | INFO     | [data] copytool_in thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:23,721 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:23,755 | INFO     | [job] queue monitor thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:23,809 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:23,845 | INFO     | [payload] failed_post thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:24,833 | INFO     | [data] copytool_out thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:25,441 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 15:49:18] 2026-03-13 14:48:51,283 | INFO     | PID=13072 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 15:49:18] 2026-03-13 14:48:51,283 | INFO     | .. there are 2 such processes running
[2026-03-13 15:49:18] 2026-03-13 14:48:51,284 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 15:49:18] 2026-03-13 14:48:51,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 15:49:18] 2026-03-13 14:48:51,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 15:49:18] 2026-03-13 14:49:07,988 | INFO     | [monitor] cgroup control has ended
[2026-03-13 15:49:18] 2026-03-13 14:49:08,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496235222848)>', '<ExcThread(monitor, started 140495787370240)>']
[2026-03-13 15:49:18] 2026-03-13 14:49:08,385 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 15:49:18] 2026-03-13 14:49:08,386 | INFO     | [monitor] control thread has ended
[2026-03-13 15:49:18] 2026-03-13 14:49:13,046 | INFO     | all workflow threads have been joined
[2026-03-13 15:49:18] 2026-03-13 14:49:13,047 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 15:49:18] 2026-03-13 14:49:13,047 | INFO     | traces error code: 0
[2026-03-13 15:49:18] 2026-03-13 14:49:13,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 15:49:18] 2026-03-13 14:49:13,519 [wrapper] ==== pilot stdout END ====
[2026-03-13 15:49:18] 2026-03-13 14:49:13,601 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 15:49:18] 2026-03-13 14:49:13,715 [wrapper] pilotpid: 13072
[2026-03-13 15:49:18] 2026-03-13 14:49:13,841 [wrapper] Pilot exit status: 0
[2026-03-13 15:49:18] 2026-03-13 14:49:14,349 [wrapper] pandaids: 7043354430
[2026-03-13 15:49:18] 2026-03-13 14:49:15,578 [wrapper] cleanup supervisor_pilot 23594 13073
[2026-03-13 15:49:18] 2026-03-13 14:49:15,678 [wrapper] Test setup, not cleaning
[2026-03-13 15:49:18] 2026-03-13 14:49:15,774 [wrapper] apfmon messages muted
[2026-03-13 15:49:18] 2026-03-13 14:49:15,901 [wrapper] ==== wrapper stdout END ====
[2026-03-13 15:49:18] 2026-03-13 14:49:15,976 [wrapper] ==== wrapper stderr END ====
[2026-03-13 15:49:18]  *** Error codes and diagnostics ***
[2026-03-13 15:49:18]     "exeErrorCode": 0,
[2026-03-13 15:49:18]     "exeErrorDiag": "",
[2026-03-13 15:49:18]     "pilotErrorCode": 0,
[2026-03-13 15:49:18]     "pilotErrorDiag": "",
[2026-03-13 15:49:18]  *** Listing of results directory ***
[2026-03-13 15:49:18] total 623160
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc    585013 Mar 12 18:04 pilot3.tar.gz
[2026-03-13 15:49:18] -rwx------. 1 boinc boinc     36322 Mar 12 18:05 runpilot2-wrapper.sh
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc      5111 Mar 12 18:06 queuedata.json
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc       100 Mar 13 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 15:49:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 11:48 run_atlas
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc       105 Mar 13 11:48 job.xml
[2026-03-13 15:49:18] -rw-r--r--. 2 boinc boinc 443444228 Mar 13 11:48 EVNT.46701403._002340.pool.root.1
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc      6389 Mar 13 11:48 init_data.xml
[2026-03-13 15:49:18] -rw-r--r--. 2 boinc boinc     15845 Mar 13 11:48 start_atlas.sh
[2026-03-13 15:49:18] drwxrwx--x. 2 boinc boinc        68 Mar 13 11:48 shared
[2026-03-13 15:49:18] -rw-r--r--. 2 boinc boinc    597534 Mar 13 11:48 input.tar.gz
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc         0 Mar 13 11:48 boinc_lockfile
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc      2571 Mar 13 11:48 pandaJob.out
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc       415 Mar 13 11:54 workernode_map.json
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc   1006495 Mar 13 11:54 agis_schedconf.cvmfs.json
[2026-03-13 15:49:18] drwx------. 5 boinc boinc      4096 Mar 13 11:54 pilot3
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc 185887051 Mar 13 15:46 HITS.48955015._014229.pool.root.1
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc       532 Mar 13 15:46 boinc_task_state.xml
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc      1012 Mar 13 15:48 memory_monitor_summary.json
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc   1511578 Mar 13 15:48 agis_ddmendpoints.agis.ALL.json
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc    451350 Mar 13 15:48 log.48955015._014229.job.log.tgz.1
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc      6320 Mar 13 15:48 heartbeat.json
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc        95 Mar 13 15:48 pilot_heartbeat.json
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc      8192 Mar 13 15:49 boinc_mmap_file
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc        28 Mar 13 15:49 wrapper_checkpoint.txt
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc      4880 Mar 13 15:49 pilotlog.txt
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc   1979000 Mar 13 15:49 log.48955015._014229.job.log.1
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc       357 Mar 13 15:49 output.list
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc       620 Mar 13 15:49 runtime_log
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc   2447360 Mar 13 15:49 result.tar.gz
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc      8816 Mar 13 15:49 runtime_log.err
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc       656 Mar 13 15:49 D02MDmZeyK9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1ikLDmLFaaCo.diag
[2026-03-13 15:49:18] -rw-r--r--. 1 boinc boinc     20812 Mar 13 15:49 stderr.txt
[2026-03-13 15:49:18] HITS file was successfully produced:
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc 185887051 Mar 13 15:46 shared/HITS.pool.root.1
[2026-03-13 15:49:18]  *** Contents of shared directory: ***
[2026-03-13 15:49:18] total 617576
[2026-03-13 15:49:18] -rw-r--r--. 2 boinc boinc 443444228 Mar 13 11:48 ATLAS.root_0
[2026-03-13 15:49:18] -rw-r--r--. 2 boinc boinc     15845 Mar 13 11:48 start_atlas.sh
[2026-03-13 15:49:18] -rw-r--r--. 2 boinc boinc    597534 Mar 13 11:48 input.tar.gz
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc 185887051 Mar 13 15:46 HITS.pool.root.1
[2026-03-13 15:49:18] -rw-------. 1 boinc boinc   2447360 Mar 13 15:49 result.tar.gz
15:49:20 (9098): run_atlas exited; CPU time 51774.529715
15:49:20 (9098): called boinc_finish(0)

</stderr_txt>
]]>

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