Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:57:50 (3065110): wrapper (7.7.26015): starting
14:57:50 (3065110): wrapper: running run_atlas (--nthreads 12)
[2026-03-16 14:57:50] Arguments: --nthreads 12
[2026-03-16 14:57:50] Threads: 12
[2026-03-16 14:57:50] Checking for CVMFS
[2026-03-16 14:57:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 14:57:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 14:57:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 14:57:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 14:57:51] 2.13.3.0 3534869 3367 77448 157351 0 188 2623785 4096001 17264 130560 0 20322588 99.999 112014 4513 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-03-16 14:57:51] CVMFS is ok
[2026-03-16 14:57:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 14:57:51] Checking for apptainer binary...
[2026-03-16 14:57:51] apptainer is not installed, using version from CVMFS
[2026-03-16 14:57:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 14:57:53] epyc7v12
[2026-03-16 14:57:53] apptainer works
[2026-03-16 14:57:53] Set ATHENA_PROC_NUMBER=12
[2026-03-16 14:57:53] Set ATHENA_CORE_NUMBER=12
[2026-03-16 14:57:53] Starting ATLAS job with PandaID=7039882727
[2026-03-16 14:57:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 16:41:02]  *** The last 200 lines of the pilot log: ***
[2026-03-16 16:41:02] 2026-03-16 16:40:04,902 | INFO     | total number of processed events: 400 (read)
[2026-03-16 16:41:02] 2026-03-16 16:40:04,943 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/0/PanDA_Pilot-7039882727/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 16:41:02] 2026-03-16 16:40:04,944 | INFO     | extracted standard info from prmon json
[2026-03-16 16:41:02] 2026-03-16 16:40:04,944 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 16:41:02] 2026-03-16 16:40:04,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 16:41:02] 2026-03-16 16:40:04,944 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 16:41:02] 2026-03-16 16:40:04,945 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 16:41:02] 2026-03-16 16:40:04,947 | INFO     | fitting pss+swap vs Time
[2026-03-16 16:41:02] 2026-03-16 16:40:04,947 | INFO     | sum of square deviations: 310052386.9899992
[2026-03-16 16:41:02] 2026-03-16 16:40:04,948 | INFO     | sum of deviations: 22547972244.969986
[2026-03-16 16:41:02] 2026-03-16 16:40:04,948 | INFO     | mean x: 1773676175.51
[2026-03-16 16:41:02] 2026-03-16 16:40:04,948 | INFO     | mean y: 2534351.53
[2026-03-16 16:41:02] 2026-03-16 16:40:04,948 | INFO     | intersect: -128984704112.31699
[2026-03-16 16:41:02] 2026-03-16 16:40:04,949 | INFO     | chi2: 3.225845364541682
[2026-03-16 16:41:02] 2026-03-16 16:40:04,949 | INFO     | sum of square deviations: 265828606.98947364
[2026-03-16 16:41:02] 2026-03-16 16:40:04,949 | INFO     | sum of deviations: 28311780962.21052
[2026-03-16 16:41:02] 2026-03-16 16:40:04,950 | INFO     | mean x: 1773676023.0105264
[2026-03-16 16:41:02] 2026-03-16 16:40:04,950 | INFO     | mean y: 2553200.789473684
[2026-03-16 16:41:02] 2026-03-16 16:40:04,950 | INFO     | intersect: -188900844481.26346
[2026-03-16 16:41:02] 2026-03-16 16:40:04,950 | INFO     | chi2: 2.3856814178559245
[2026-03-16 16:41:02] 2026-03-16 16:40:04,950 | INFO     | current chi2=2.3856814178559245 (change=26.044768169013743 %)
[2026-03-16 16:41:02] 2026-03-16 16:40:04,950 | INFO     | sum of square deviations: 226023514.4888887
[2026-03-16 16:41:02] 2026-03-16 16:40:04,951 | INFO     | sum of deviations: 26618498427.97776
[2026-03-16 16:41:02] 2026-03-16 16:40:04,951 | INFO     | mean x: 1773675870.511111
[2026-03-16 16:41:02] 2026-03-16 16:40:04,951 | INFO     | mean y: 2546708.5222222223
[2026-03-16 16:41:02] 2026-03-16 16:40:04,951 | INFO     | intersect: -208880977988.91833
[2026-03-16 16:41:02] 2026-03-16 16:40:04,952 | INFO     | chi2: 2.384784199685246
[2026-03-16 16:41:02] 2026-03-16 16:40:04,952 | INFO     | current chi2=2.384784199685246 (change=0.03760846540377188 %)
[2026-03-16 16:41:02] 2026-03-16 16:40:04,952 | INFO     | right removable region: 89
[2026-03-16 16:41:02] 2026-03-16 16:40:04,952 | INFO     | sum of square deviations: 265827996.98947364
[2026-03-16 16:41:02] 2026-03-16 16:40:04,953 | INFO     | sum of deviations: -921448333.642106
[2026-03-16 16:41:02] 2026-03-16 16:40:04,953 | INFO     | mean x: 1773676328.0105264
[2026-03-16 16:41:02] 2026-03-16 16:40:04,953 | INFO     | mean y: 2614392.642105263
[2026-03-16 16:41:02] 2026-03-16 16:40:04,953 | INFO     | intersect: 6150767015.29632
[2026-03-16 16:41:02] 2026-03-16 16:40:04,953 | INFO     | chi2: 0.9870335697265076
[2026-03-16 16:41:02] 2026-03-16 16:40:04,953 | INFO     | current chi2=0.9870335697265076 (change=69.40232843843269 %)
[2026-03-16 16:41:02] 2026-03-16 16:40:04,954 | INFO     | sum of square deviations: 226022294.4888887
[2026-03-16 16:41:02] 2026-03-16 16:40:04,954 | INFO     | sum of deviations: -4703586201.933333
[2026-03-16 16:41:02] 2026-03-16 16:40:04,954 | INFO     | mean x: 1773676480.511111
[2026-03-16 16:41:02] 2026-03-16 16:40:04,954 | INFO     | mean y: 2628491.933333333
[2026-03-16 16:41:02] 2026-03-16 16:40:04,955 | INFO     | intersect: 36913324577.42885
[2026-03-16 16:41:02] 2026-03-16 16:40:04,955 | INFO     | chi2: 0.8936253627471198
[2026-03-16 16:41:02] 2026-03-16 16:40:04,955 | INFO     | current chi2=0.8936253627471198 (change=9.463528885372138 %)
[2026-03-16 16:41:02] 2026-03-16 16:40:04,955 | INFO     | left removable region: 20
[2026-03-16 16:41:02] 2026-03-16 16:40:04,955 | INFO     | sum of square deviations: 101843282.9855073
[2026-03-16 16:41:02] 2026-03-16 16:40:04,956 | INFO     | sum of deviations: 771379501.1449276
[2026-03-16 16:41:02] 2026-03-16 16:40:04,956 | INFO     | mean x: 1773676450.0144928
[2026-03-16 16:41:02] 2026-03-16 16:40:04,956 | INFO     | mean y: 2658740.855072464
[2026-03-16 16:41:02] 2026-03-16 16:40:04,956 | INFO     | intersect: -13431488461.561632
[2026-03-16 16:41:02] 2026-03-16 16:40:04,956 | INFO     | chi2: 0.0003377519361941635
[2026-03-16 16:41:02] 2026-03-16 16:40:04,956 | INFO     | current memory leak: 7.57 B/s (using 69 data points, chi2=0.00)
[2026-03-16 16:41:02] 2026-03-16 16:40:04,957 | INFO     | could have reported an average CPU frequency of 2380 MHz (7 samples)
[2026-03-16 16:41:02] 2026-03-16 16:40:04,957 | INFO     | ..............................
[2026-03-16 16:41:02] 2026-03-16 16:40:04,957 | INFO     | . Timing measurements:
[2026-03-16 16:41:02] 2026-03-16 16:40:04,957 | INFO     | . get job = 0 s
[2026-03-16 16:41:02] 2026-03-16 16:40:04,957 | INFO     | . initial setup = 26 s
[2026-03-16 16:41:02] 2026-03-16 16:40:04,957 | INFO     | . payload setup = 15 s
[2026-03-16 16:41:02] 2026-03-16 16:40:04,957 | INFO     | . stage-in = 0 s
[2026-03-16 16:41:02] 2026-03-16 16:40:04,957 | INFO     | . payload execution = 6053 s
[2026-03-16 16:41:02] 2026-03-16 16:40:04,958 | INFO     | . stage-out = 1 s
[2026-03-16 16:41:02] 2026-03-16 16:40:04,958 | INFO     | . log creation = 0 s
[2026-03-16 16:41:02] 2026-03-16 16:40:04,958 | INFO     | ..............................
[2026-03-16 16:41:02] 2026-03-16 16:40:05,065 | INFO     | 
[2026-03-16 16:41:02] 2026-03-16 16:40:05,065 | INFO     | job summary report
[2026-03-16 16:41:02] 2026-03-16 16:40:05,065 | INFO     | --------------------------------------------------
[2026-03-16 16:41:02] 2026-03-16 16:40:05,065 | INFO     | PanDA job id: 7039882727
[2026-03-16 16:41:02] 2026-03-16 16:40:05,065 | INFO     | task id: 48700890
[2026-03-16 16:41:02] 2026-03-16 16:40:05,066 | INFO     | errors: (none)
[2026-03-16 16:41:02] 2026-03-16 16:40:05,066 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 16:41:02] 2026-03-16 16:40:05,066 | INFO     | pilot state: finished 
[2026-03-16 16:41:02] 2026-03-16 16:40:05,066 | INFO     | transexitcode: 0
[2026-03-16 16:41:02] 2026-03-16 16:40:05,066 | INFO     | exeerrorcode: 0
[2026-03-16 16:41:02] 2026-03-16 16:40:05,066 | INFO     | exeerrordiag: 
[2026-03-16 16:41:02] 2026-03-16 16:40:05,066 | INFO     | exitcode: 0
[2026-03-16 16:41:02] 2026-03-16 16:40:05,066 | INFO     | exitmsg: OK
[2026-03-16 16:41:02] 2026-03-16 16:40:05,066 | INFO     | cpuconsumptiontime: 36517 s
[2026-03-16 16:41:02] 2026-03-16 16:40:05,066 | INFO     | nevents: 400
[2026-03-16 16:41:02] 2026-03-16 16:40:05,067 | INFO     | neventsw: 0
[2026-03-16 16:41:02] 2026-03-16 16:40:05,067 | INFO     | pid: 3074298
[2026-03-16 16:41:02] 2026-03-16 16:40:05,067 | INFO     | pgrp: 3074298
[2026-03-16 16:41:02] 2026-03-16 16:40:05,067 | INFO     | corecount: 12
[2026-03-16 16:41:02] 2026-03-16 16:40:05,067 | INFO     | event service: False
[2026-03-16 16:41:02] 2026-03-16 16:40:05,067 | INFO     | sizes: {0: 2279707, 1: 2280168, 6073: 2307190, 6075: 2316290, 6078: 2316428}
[2026-03-16 16:41:02] 2026-03-16 16:40:05,067 | INFO     | --------------------------------------------------
[2026-03-16 16:41:02] 2026-03-16 16:40:05,067 | INFO     | 
[2026-03-16 16:41:02] 2026-03-16 16:40:05,067 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/0
[2026-03-16 16:41:02] 2026-03-16 16:40:05,107 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,108 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,108 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,108 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,108 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,108 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,108 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,108 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,108 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,109 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,109 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,109 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,109 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 16:41:02] 2026-03-16 16:40:05,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,110 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 16:41:02] 2026-03-16 16:40:05,110 | INFO     | job 7039882727 has completed (purged errors)
[2026-03-16 16:41:02] 2026-03-16 16:40:05,110 | INFO     | overall cleanup function is called
[2026-03-16 16:41:02] 2026-03-16 16:40:05,839 | INFO     | PID=3069301 has CPU usage=21.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-16 16:41:02] 2026-03-16 16:40:05,839 | INFO     | .. there are 20 such processes running
[2026-03-16 16:41:02] 2026-03-16 16:40:06,120 | INFO     | --- collectZombieJob: --- 10, [3074298]
[2026-03-16 16:41:02] 2026-03-16 16:40:06,120 | INFO     | zombie collector waiting for pid 3074298
[2026-03-16 16:41:02] 2026-03-16 16:40:06,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 16:41:02] 2026-03-16 16:40:06,121 | INFO     | collected zombie processes
[2026-03-16 16:41:02] 2026-03-16 16:40:06,121 | INFO     | will attempt to kill all subprocesses of pid=3074298
[2026-03-16 16:41:02] 2026-03-16 16:40:07,112 | INFO     | process IDs to be killed: [3074298] (in reverse order)
[2026-03-16 16:41:02] 2026-03-16 16:40:07,436 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 16:41:02] 2026-03-16 16:40:07,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 16:41:02] 2026-03-16 16:40:07,472 | INFO     | did not find any defunct processes belonging to 3074298
[2026-03-16 16:41:02] 2026-03-16 16:40:07,500 | INFO     | did not find any defunct processes belonging to 3074298
[2026-03-16 16:41:02] 2026-03-16 16:40:07,501 | INFO     | ready for new job
[2026-03-16 16:41:02] 2026-03-16 16:40:07,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 16:41:02] 2026-03-16 16:40:07,506 | INFO     | **************************************
[2026-03-16 16:41:02] 2026-03-16 16:40:07,506 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-16 16:41:02] 2026-03-16 16:40:07,506 | INFO     | **************************************
[2026-03-16 16:41:02] 2026-03-16 16:40:07,506 | INFO     | 
[2026-03-16 16:41:02] 2026-03-16 16:40:07,524 | INFO     | architecture information:
[2026-03-16 16:41:02] 2026-03-16 16:40:07,527 | INFO     | executing command: cat /etc/os-release
[2026-03-16 16:41:02] 2026-03-16 16:40:07,567 | INFO     | cat /etc/os-release:
[2026-03-16 16:41:02] NAME="CentOS Linux"
[2026-03-16 16:41:02] VERSION="7 (Core)"
[2026-03-16 16:41:02] ID="centos"
[2026-03-16 16:41:02] ID_LIKE="rhel fedora"
[2026-03-16 16:41:02] VERSION_ID="7"
[2026-03-16 16:41:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 16:41:02] ANSI_COLOR="0;31"
[2026-03-16 16:41:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 16:41:02] HOME_URL="https://www.centos.org/"
[2026-03-16 16:41:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 16:41:02] 
[2026-03-16 16:41:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 16:41:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 16:41:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 16:41:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 16:41:02] 
[2026-03-16 16:41:02] 2026-03-16 16:40:07,568 | INFO     | **************************************
[2026-03-16 16:41:02] 2026-03-16 16:40:08,073 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/0
[2026-03-16 16:41:02] 2026-03-16 16:40:08,115 | INFO     | sufficient remaining disk space (155822587904 B)
[2026-03-16 16:41:02] 2026-03-16 16:40:08,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 16:41:02] 2026-03-16 16:40:08,115 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 16:41:02] 2026-03-16 16:40:08,115 | INFO     | update_server=False
[2026-03-16 16:41:02] 2026-03-16 16:40:08,115 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 16:41:02] 2026-03-16 16:40:08,117 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 16:41:02] 2026-03-16 16:40:08,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 16:41:02] 2026-03-16 16:40:08,118 | INFO     | aborting loop
[2026-03-16 16:41:02] 2026-03-16 16:40:08,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 16:41:02] 2026-03-16 16:40:08,820 | INFO     | all payload control threads have been joined
[2026-03-16 16:41:02] 2026-03-16 16:40:09,122 | INFO     | [job] retrieve thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:09,123 | INFO     | [job] job monitor thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:09,126 | INFO     | all data control threads have been joined
[2026-03-16 16:41:02] 2026-03-16 16:40:09,224 | INFO     | [payload] validate_post thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:09,318 | INFO     | [job] validate thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:09,352 | INFO     | [payload] failed_post thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:09,365 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:09,390 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:09,468 | INFO     | all job control threads have been joined
[2026-03-16 16:41:02] 2026-03-16 16:40:09,483 | INFO     | [data] copytool_in thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:09,827 | INFO     | [payload] control thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:10,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 16:41:02] 2026-03-16 16:40:10,118 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:10,123 | INFO     | [data] copytool_out thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:10,131 | INFO     | [data] control thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:10,473 | INFO     | [job] control thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:11,085 | INFO     | [job] queue monitor thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:12,565 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:18,422 | INFO     | job.realtimelogging is not enabled
[2026-03-16 16:41:02] 2026-03-16 16:40:19,427 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 16:41:02] 2026-03-16 16:40:39,088 | INFO     | PID=3069301 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 16:41:02] 2026-03-16 16:40:39,088 | INFO     | .. there are 20 such processes running
[2026-03-16 16:41:02] 2026-03-16 16:40:39,089 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 16:41:02] 2026-03-16 16:40:39,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 16:41:02] 2026-03-16 16:40:39,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 16:41:02] 2026-03-16 16:40:55,408 | INFO     | [monitor] cgroup control has ended
[2026-03-16 16:41:02] 2026-03-16 16:40:56,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133302551496512)>', '<ExcThread(monitor, started 133302019155712)>']
[2026-03-16 16:41:02] 2026-03-16 16:40:57,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 16:41:02] 2026-03-16 16:40:57,181 | INFO     | [monitor] control thread has ended
[2026-03-16 16:41:02] 2026-03-16 16:41:01,438 | INFO     | all workflow threads have been joined
[2026-03-16 16:41:02] 2026-03-16 16:41:01,438 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 16:41:02] 2026-03-16 16:41:01,439 | INFO     | traces error code: 0
[2026-03-16 16:41:02] 2026-03-16 16:41:01,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 16:41:02] 2026-03-16 16:41:01,878 [wrapper] ==== pilot stdout END ====
[2026-03-16 16:41:02] 2026-03-16 16:41:01,885 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 16:41:02] 2026-03-16 16:41:01,892 [wrapper] pilotpid: 3069301
[2026-03-16 16:41:02] 2026-03-16 16:41:01,900 [wrapper] Pilot exit status: 0
[2026-03-16 16:41:02] 2026-03-16 16:41:01,935 [wrapper] pandaids: 7039882727
[2026-03-16 16:41:02] 2026-03-16 16:41:02,095 [wrapper] cleanup supervisor_pilot 3235131 3069302
[2026-03-16 16:41:02] 2026-03-16 16:41:02,106 [wrapper] Test setup, not cleaning
[2026-03-16 16:41:02] 2026-03-16 16:41:02,115 [wrapper] apfmon messages muted
[2026-03-16 16:41:02] 2026-03-16 16:41:02,122 [wrapper] ==== wrapper stdout END ====
[2026-03-16 16:41:02] 2026-03-16 16:41:02,134 [wrapper] ==== wrapper stderr END ====
[2026-03-16 16:41:02]  *** Error codes and diagnostics ***
[2026-03-16 16:41:02]     "exeErrorCode": 0,
[2026-03-16 16:41:02]     "exeErrorDiag": "",
[2026-03-16 16:41:02]     "pilotErrorCode": 0,
[2026-03-16 16:41:02]     "pilotErrorDiag": "",
[2026-03-16 16:41:02]  *** Listing of results directory ***
[2026-03-16 16:41:02] total 335728
[2026-03-16 16:41:02] -rw-r--r-- 1 boinc boinc      5111 Mar  4 12:56 queuedata.json
[2026-03-16 16:41:02] -rw-r--r-- 1 boinc boinc    584627 Mar  4 12:56 pilot3.tar.gz
[2026-03-16 16:41:02] -rwx------ 1 boinc boinc     36322 Mar  4 12:56 runpilot2-wrapper.sh
[2026-03-16 16:41:02] -rw-rw-r-- 1 boinc boinc       100 Mar 16 14:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 16:41:02] -rwxr-xr-x 1 boinc boinc      7986 Mar 16 14:57 run_atlas
[2026-03-16 16:41:02] -rw-rw-r-- 1 boinc boinc       105 Mar 16 14:57 job.xml
[2026-03-16 16:41:02] -rw-r--r-- 2 boinc boinc 189385314 Mar 16 14:57 EVNT.48700888._000135.pool.root.1
[2026-03-16 16:41:02] -rw-r--r-- 2 boinc boinc     15845 Mar 16 14:57 start_atlas.sh
[2026-03-16 16:41:02] drwxrwx--x 2 boinc boinc      4096 Mar 16 14:57 shared
[2026-03-16 16:41:02] -rw-r--r-- 2 boinc boinc    597930 Mar 16 14:57 input.tar.gz
[2026-03-16 16:41:02] -rw-rw-r-- 1 boinc boinc         0 Mar 16 14:57 boinc_setup_complete
[2026-03-16 16:41:02] -rw-rw-r-- 1 boinc boinc      7049 Mar 16 14:57 init_data.xml
[2026-03-16 16:41:02] -rw-rw-r-- 1 boinc boinc         0 Mar 16 14:57 boinc_lockfile
[2026-03-16 16:41:02] -rw-rw-r-- 1 boinc boinc      2512 Mar 16 14:57 pandaJob.out
[2026-03-16 16:41:02] -rw------- 1 boinc boinc   1006429 Mar 16 14:58 agis_schedconf.cvmfs.json
[2026-03-16 16:41:02] -rw------- 1 boinc boinc   1511579 Mar 16 14:58 agis_ddmendpoints.agis.ALL.json
[2026-03-16 16:41:02] -rw------- 1 boinc boinc       420 Mar 16 14:58 workernode_map.json
[2026-03-16 16:41:02] drwx------ 5 boinc boinc      4096 Mar 16 14:58 pilot3
[2026-03-16 16:41:02] -rw------- 1 boinc boinc 147917527 Mar 16 16:39 HITS.48700890._003358.pool.root.1
[2026-03-16 16:41:02] -rw-rw-r-- 1 boinc boinc       530 Mar 16 16:39 boinc_task_state.xml
[2026-03-16 16:41:02] -rw------- 1 boinc boinc      1030 Mar 16 16:39 memory_monitor_summary.json
[2026-03-16 16:41:02] -rw------- 1 boinc boinc        95 Mar 16 16:39 pilot_heartbeat.json
[2026-03-16 16:41:02] -rw------- 1 boinc boinc    413497 Mar 16 16:40 log.48700890._003358.job.log.tgz.1
[2026-03-16 16:41:02] -rw------- 1 boinc boinc      6280 Mar 16 16:40 heartbeat.json
[2026-03-16 16:41:02] -rw-rw-r-- 1 boinc boinc        27 Mar 16 16:40 wrapper_checkpoint.txt
[2026-03-16 16:41:02] -rw-rw-r-- 1 boinc boinc      8192 Mar 16 16:40 boinc_mmap_file
[2026-03-16 16:41:02] -rw------- 1 boinc boinc      4916 Mar 16 16:41 pilotlog.txt
[2026-03-16 16:41:02] -rw------- 1 boinc boinc    863989 Mar 16 16:41 log.48700890._003358.job.log.1
[2026-03-16 16:41:02] -rw------- 1 boinc boinc       357 Mar 16 16:41 output.list
[2026-03-16 16:41:02] -rw-rw-r-- 1 boinc boinc       620 Mar 16 16:41 runtime_log
[2026-03-16 16:41:02] -rw------- 1 boinc boinc   1290240 Mar 16 16:41 result.tar.gz
[2026-03-16 16:41:02] -rw-rw-r-- 1 boinc boinc      9166 Mar 16 16:41 runtime_log.err
[2026-03-16 16:41:02] -rw------- 1 boinc boinc       651 Mar 16 16:41 PkJMDmuw0H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKLKLDm81xMSm.diag
[2026-03-16 16:41:02] -rw-rw-r-- 1 boinc boinc     20960 Mar 16 16:41 stderr.txt
[2026-03-16 16:41:02] HITS file was successfully produced:
[2026-03-16 16:41:02] -rw------- 1 boinc boinc 147917527 Mar 16 16:39 shared/HITS.pool.root.1
[2026-03-16 16:41:02]  *** Contents of shared directory: ***
[2026-03-16 16:41:02] total 331268
[2026-03-16 16:41:02] -rw-r--r-- 2 boinc boinc 189385314 Mar 16 14:57 ATLAS.root_0
[2026-03-16 16:41:02] -rw-r--r-- 2 boinc boinc     15845 Mar 16 14:57 start_atlas.sh
[2026-03-16 16:41:02] -rw-r--r-- 2 boinc boinc    597930 Mar 16 14:57 input.tar.gz
[2026-03-16 16:41:02] -rw------- 1 boinc boinc 147917527 Mar 16 16:39 HITS.pool.root.1
[2026-03-16 16:41:02] -rw------- 1 boinc boinc   1290240 Mar 16 16:41 result.tar.gz
16:41:04 (3065110): run_atlas exited; CPU time 36849.313624
16:41:04 (3065110): called boinc_finish(0)

</stderr_txt>
]]>

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